/usr/share/pyshared/mrjob/inline.py is in python-mrjob 0.3.3.2-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 | # Copyright 2011 Matthew Tai
# Copyright 2011 Yelp
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""Run an MRJob inline by running all mappers and reducers through the same
process. Useful for debugging."""
from __future__ import with_statement
__author__ = 'Matthew Tai <mtai@adku.com>'
import logging
import os
import shutil
import subprocess
import sys
try:
from cStringIO import StringIO
StringIO # quiet "redefinition of unused ..." warning from pyflakes
except ImportError:
from StringIO import StringIO
from mrjob.conf import combine_dicts
from mrjob.conf import combine_local_envs
from mrjob.runner import MRJobRunner
from mrjob.job import MRJob
from mrjob.util import save_current_environment
log = logging.getLogger('mrjob.inline')
class InlineMRJobRunner(MRJobRunner):
"""Runs an :py:class:`~mrjob.job.MRJob` without invoking the job as
a subprocess, so it's easy to attach a debugger.
This is NOT the default way of testing jobs; to more accurately
simulate your environment prior to running on Hadoop/EMR, use ``-r local``.
It's rare to need to instantiate this class directly (see
:py:meth:`~InlineMRJobRunner.__init__` for details).
"""
alias = 'inline'
def __init__(self, mrjob_cls=None, **kwargs):
""":py:class:`~mrjob.inline.InlineMRJobRunner` takes the same keyword
args as :py:class:`~mrjob.runner.MRJobRunner`. However, please note:
* *hadoop_extra_args*, *hadoop_input_format*, *hadoop_output_format*,
and *hadoop_streaming_jar*, *jobconf*, and *partitioner* are ignored
because they require Java. If you need to test these, consider
starting up a standalone Hadoop instance and running your job with
``-r hadoop``.
* *cmdenv*, *python_bin*, *setup_cmds*, *setup_scripts*,
*steps_python_bin*, *upload_archives*, and *upload_files* are ignored
because we don't invoke the job as a subprocess or run it in its own
directory.
"""
super(InlineMRJobRunner, self).__init__(**kwargs)
assert ((mrjob_cls) is None or issubclass(mrjob_cls, MRJob))
self._mrjob_cls = mrjob_cls
self._prev_outfile = None
self._final_outfile = None
self._counters = []
@classmethod
def _opts_combiners(cls):
# on windows, PYTHONPATH should use ;, not :
return combine_dicts(
super(InlineMRJobRunner, cls)._opts_combiners(),
{'cmdenv': combine_local_envs})
# options that we ignore because they require real Hadoop
IGNORED_HADOOP_OPTS = [
'hadoop_extra_args',
'hadoop_streaming_jar',
'jobconf'
]
# keyword arguments that we ignore that are stored directly in
# self._<kwarg_name> because they aren't configurable from mrjob.conf
# use the version with the underscore to better support grepping our code
IGNORED_HADOOP_ATTRS = [
'_hadoop_input_format',
'_hadoop_output_format',
'_partitioner',
]
# options that we ignore because they involve running subprocesses
IGNORED_LOCAL_OPTS = [
'python_bin',
'setup_cmds',
'setup_scripts',
'steps_python_bin',
'upload_archives',
'upload_files',
]
def _run(self):
self._setup_output_dir()
assert self._script # shouldn't be able to run if no script
default_opts = self.get_default_opts()
for ignored_opt in self.IGNORED_HADOOP_OPTS:
if self._opts[ignored_opt] != default_opts[ignored_opt]:
log.warning('ignoring %s option (requires real Hadoop): %r' %
(ignored_opt, self._opts[ignored_opt]))
for ignored_attr in self.IGNORED_HADOOP_ATTRS:
value = getattr(self, ignored_attr)
if value is not None:
log.warning(
'ignoring %s keyword arg (requires real Hadoop): %r' %
(ignored_attr[1:], value))
for ignored_opt in self.IGNORED_LOCAL_OPTS:
if self._opts[ignored_opt] != default_opts[ignored_opt]:
log.warning('ignoring %s option (use -r local instead): %r' %
(ignored_opt, self._opts[ignored_opt]))
with save_current_environment():
# set cmdenv variables
os.environ.update(self._get_cmdenv())
# run mapper, sort, reducer for each step
for step_number, step_name in enumerate(self._get_steps()):
self._invoke_inline_mrjob(step_number, 'step-%d-mapper' %
step_number, is_mapper=True,
has_combiner=('C' in step_name))
if 'R' in step_name:
mapper_output_path = self._prev_outfile
sorted_mapper_output_path = self._decide_output_path(
'step-%d-mapper-sorted' % step_number)
with open(sorted_mapper_output_path, 'w') as sort_out:
proc = subprocess.Popen(
['sort', mapper_output_path],
stdout=sort_out, env={'LC_ALL': 'C'})
proc.wait()
# This'll read from sorted_mapper_output_path
self._invoke_inline_mrjob(step_number, 'step-%d-reducer' %
step_number, is_reducer=True)
# move final output to output directory
self._final_outfile = os.path.join(self._output_dir, 'part-00000')
log.info('Moving %s -> %s' % (self._prev_outfile, self._final_outfile))
shutil.move(self._prev_outfile, self._final_outfile)
def _get_steps(self):
"""Redefine this so that we can get step descriptions without
calling a subprocess."""
job_args = ['--steps'] + self._mr_job_extra_args(local=True)
return self._mrjob_cls(args=job_args)._steps_desc()
def _invoke_inline_mrjob(self, step_number, outfile_name, is_mapper=False,
is_reducer=False, is_combiner=False,
has_combiner=False, child_stdin=None):
child_stdin = child_stdin or sys.stdin
common_args = (['--step-num=%d' % step_number] +
self._mr_job_extra_args(local=True))
if is_mapper:
child_args = (
['--mapper'] + self._decide_input_paths() + common_args)
elif is_reducer:
child_args = (
['--reducer'] + self._decide_input_paths() + common_args)
elif is_combiner:
child_args = ['--combiner'] + common_args + ['-']
child_instance = self._mrjob_cls(args=child_args)
# Use custom stdin
if has_combiner:
child_stdout = StringIO()
else:
outfile = self._decide_output_path(outfile_name)
child_stdout = open(outfile, 'w')
child_instance.sandbox(stdin=child_stdin, stdout=child_stdout)
child_instance.execute()
if has_combiner:
sorted_lines = sorted(child_stdout.getvalue().splitlines())
combiner_stdin = StringIO('\n'.join(sorted_lines))
else:
child_stdout.flush()
child_stdout.close()
while len(self._counters) <= step_number:
self._counters.append({})
child_instance.parse_counters(self._counters[step_number - 1])
self.print_counters([step_number + 1])
if has_combiner:
self._invoke_inline_mrjob(step_number, outfile_name,
is_combiner=True,
child_stdin=combiner_stdin)
combiner_stdin.close()
def counters(self):
return self._counters
def _decide_input_paths(self):
# decide where to get input
if self._prev_outfile is not None:
input_paths = [self._prev_outfile]
else:
input_paths = []
for path in self._input_paths:
if path == '-':
input_paths.append(self._dump_stdin_to_local_file())
else:
input_paths.append(path)
return input_paths
def _decide_output_path(self, outfile_name):
# run the mapper
outfile = os.path.join(self._get_local_tmp_dir(), outfile_name)
log.info('writing to %s' % outfile)
log.debug('')
self._prev_outfile = outfile
return outfile
def _setup_output_dir(self):
if not self._output_dir:
self._output_dir = os.path.join(
self._get_local_tmp_dir(), 'output')
if not os.path.isdir(self._output_dir):
log.debug('Creating output directory %s' % self._output_dir)
self.mkdir(self._output_dir)
|