/usr/share/pyshared/nipype/utils/matlabtools.py is in python-nipype 0.5.3-2wheezy2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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# vi: set ft=python sts=4 ts=4 sw=4 et:
""" Useful Functions for working with matlab"""
# Stdlib imports
import os
import re
import tempfile
# Functions, classes and other top-level code
def fltcols(vals):
''' Trivial little function to make 1xN float vector '''
return np.atleast_2d(np.array(vals, dtype=float))
def mlab_tempfile(dir=None):
"""Returns a temporary file-like object with valid matlab name.
The file name is accessible as the .name attribute of the returned object.
The caller is responsible for closing the returned object, at which time
the underlying file gets deleted from the filesystem.
Parameters
----------
dir : str
A path to use as the starting directory. Note that this directory must
already exist, it is NOT created if it doesn't (in that case, OSError
is raised instead).
Returns
-------
f : A file-like object.
Examples
--------
>>> fn = mlab_tempfile()
>>> import os
>>> filename = os.path.basename(fn.name)
>>> '-' not in filename
True
>>> fn.close()
"""
valid_name = re.compile(r'^\w+$')
# Make temp files until we get one whose name is a valid matlab identifier,
# since matlab imposes that constraint. Since the temp file routines may
# return names that aren't valid matlab names, but we can't control that
# directly, we just keep trying until we get a valid name. To avoid an
# infinite loop for some strange reason, we only try 100 times.
for n in range(100):
f = tempfile.NamedTemporaryFile(suffix='.m',prefix='tmp_matlab_',
dir=dir)
# Check the file name for matlab compilance
fname = os.path.splitext(os.path.basename(f.name))[0]
if valid_name.match(fname):
break
# Close the temp file we just made if its name is not valid; the
# tempfile module then takes care of deleting the actual file on disk.
f.close()
else:
raise ValueError("Could not make temp file after 100 tries")
return f
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