/usr/share/xcrysden/Tcl/g98.tcl is in xcrysden-data 1.5.53-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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# Author: #
# ------ #
# Anton Kokalj Email: Tone.Kokalj@ijs.si #
# Department of Physical and Organic Chemistry Phone: x 386 1 477 3523 #
# Jozef Stefan Institute Fax: x 386 1 477 3811 #
# Jamova 39, SI-1000 Ljubljana #
# SLOVENIA #
# #
# Source: $XCRYSDEN_TOPDIR/Tcl/g98.tcl
# ------ #
# Copyright (c) 1996-2003 by Anton Kokalj #
#############################################################################
proc g98Cube {{file {}} {viewmol_exists {}}} {
global g98 system
# delete welcome window
set title_off 0
if {[winfo exists .title]} {
destroy .title
set title_off 1
}
if { $file == {} } {
# get-file
set file [tk_getOpenFile -defaultextension .cube \
-filetypes {
{{All Files} {.*} }
} -initialdir $system(PWD) \
-title "Open Gaussian CUBE File"]
if { $file == "" } {
return
}
} else {
if { ![file exists $file] } {
ErrorDialog "WARNING: File \"$file\" does not exists !!!"
return
}
}
set files [g98Cube:cube2xsf $file]
# ------------------------------------------------------------------------
# Now we have either one or several XSF files. If there is only one,
# simply load it, otherwise ask for which one to load !!!
# ------------------------------------------------------------------------
set nfiles [llength $files]
# now create a Viewer ...
if { $viewmol_exists == "" } {
if { $title_off } {
wm deiconify .
}
ViewMol .
}
# ... and load the structure
if { $nfiles == 0 } {
ErrorDialog "An ERROR occured: cube2xsf has failed !!!"
return
} elseif { $nfiles == 1 } {
set file $files
} else {
# make a selection-list, where user will select a directory !!!
set file [g98Cube:selectFile $files]
}
xsfOpen $g98(cube_dir)/$file .mesa
}
proc g98Cube:cube2xsf {file} {
global g98 system
# uncompress the file is necessary
set file [gunzipFile $file]
# make a new directory where converting files will be placed
set dir $system(SCRDIR)/g98cube
file mkdir $dir
cd $dir
set g98(cube_dir) [pwd]
# execute cube2xsf
set cw [DisplayUpdateWidget "Calculating" "Converting GAUSSIAN CUBE file to XSF"]
update
xcCatchExec $system(BINDIR)/cube2xsf 1 $file
destroy $cw
return [glob -nocomplain *.xsf]
}
proc g98Cube:selectFile {files} {
global g98cube
set result ""
set t [xcToplevel .g98cube "Select File" "Select File"]
set f1 [frame $t.1 -class StressText]
set f2 [frame $t.2]
set f3 [frame $t.3]
pack $f1 $f2 $f3 -side top -padx 10 -pady 10 -ipadx 10 -ipady 10
set m [message $f1.m -text "Your CUBE file contain several molecular orbitals, therefore several XSF files were created.\n\nPlease select a particular XSF file that you would like to analyze." -width 400 -justify left]
pack $m -side top -fill both -expand 1 -padx 3 -pady 3
set ind 1
set g98cube(xsf_file) [lindex $files 0]
set irow 1
set icol 1
foreach file $files {
set r [radiobutton $f2.r$ind \
-variable g98cube(xsf_file) \
-text "File: $file" \
-value $file \
-relief ridge \
-bd 2 \
-anchor w]
grid $r -row $irow -column $icol -padx 3 -pady 3 -sticky we
incr icol
if { $icol > 3 } {
set icol 1
incr irow
}
incr ind
}
set b [button $f3.b -text "Continue" -command [list CancelProc $t]]
pack $b -side top -ipadx 5 -ipady 5
tkwait window $t
return $g98cube(xsf_file)
}
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