/usr/include/Bpp/Seq.all is in libbpp-seq-dev 2.0.3-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 | #include "Seq/CodonSiteTools.h"
#include "Seq/DNAToRNA.h"
#include "Seq/DistanceMatrix.h"
#include "Seq/NucleicAcidsReplication.h"
#include "Seq/Sequence.h"
#include "Seq/SequenceExceptions.h"
#include "Seq/SequencePositionIterators.h"
#include "Seq/SequenceTools.h"
#include "Seq/SequenceWalker.h"
#include "Seq/SequenceWithAnnotation.h"
#include "Seq/SequenceWithAnnotationTools.h"
#include "Seq/SequenceWithQuality.h"
#include "Seq/SequenceWithQualityTools.h"
#include "Seq/Site.h"
#include "Seq/SiteExceptions.h"
#include "Seq/SiteTools.h"
#include "Seq/StringSequenceTools.h"
#include "Seq/SymbolList.h"
#include "Seq/SymbolListTools.h"
#include "Seq/Transliterator.h"
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