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// @(#)root/roostats:$Id:  cranmer $
// Author: Kyle Cranmer, Akira Shibata
/*************************************************************************
 * Copyright (C) 1995-2008, Rene Brun and Fons Rademakers.               *
 * All rights reserved.                                                  *
 *                                                                       *
 * For the licensing terms see $ROOTSYS/LICENSE.                         *
 * For the list of contributors see $ROOTSYS/README/CREDITS.             *
 *************************************************************************/

#ifndef ROOSTATS_HISTOTOWORKSPACEFACTORYFAST
#define ROOSTATS_HISTOTOWORKSPACEFACTORYFAST

#include <vector>
#include <string>
#include <map>
#include <iostream>
#include <sstream>

#include <RooPlot.h>
#include <RooArgSet.h>
#include <RooFitResult.h>
#include <RooAbsReal.h>
#include <RooRealVar.h>
#include <RooWorkspace.h>
#include <TObject.h>
#include <TH1.h>
#include <TDirectory.h>

#include "RooStats/HistFactory/EstimateSummary.h"
#include "RooStats/HistFactory/Measurement.h"


class ParamHistFunc;


namespace RooStats{
namespace HistFactory{
  class HistoToWorkspaceFactoryFast: public TObject {
    
  public:
    
    HistoToWorkspaceFactoryFast(  std::string, std::string , std::vector<std::string> , double =200, double =20, int =0, int =6, TFile* =NULL);
    HistoToWorkspaceFactoryFast(  RooStats::HistFactory::Measurement& Meas );
    static void ConfigureWorkspaceForMeasurement( const std::string& ModelName, RooWorkspace* ws_single, Measurement& measurement );
    
    HistoToWorkspaceFactoryFast();
    virtual ~HistoToWorkspaceFactoryFast();
    
    RooWorkspace* MakeSingleChannelModel( Measurement& measurement, Channel& channel );
    static RooWorkspace* MakeCombinedModel( Measurement& measurement );
    
    void SetFunctionsToPreprocess(std::vector<std::string> lines){ fPreprocessFunctions = lines;}
    
    void AddEfficiencyTerms(RooWorkspace* proto, std::string prefix, std::string interpName,
			    std::map<std::string,std::pair<double,double> > systMap,
			    std::vector<std::string>& likelihoodTermNames, std::vector<std::string>& totSystTermNames);
    
    std::string AddNormFactor(RooWorkspace *, std::string & , std::string & , EstimateSummary & , bool );
    
    void AddMultiVarGaussConstraint(RooWorkspace* proto, std::string prefix,int lowBin, int highBin, std::vector<std::string>& likelihoodTermNames);
    
    void AddPoissonTerms(RooWorkspace* proto, std::string prefix, std::string obsPrefix, std::string expPrefix, int lowBin, int highBin,
			 std::vector<std::string>& likelihoodTermNames);
    
    //void Combine_old();
    
    RooWorkspace *  MakeCombinedModel(std::vector<std::string>, std::vector<RooWorkspace*>);
    
    //void Combine_ratio(std::vector<std::string> , std::vector<RooWorkspace*>);
    
    void Customize(RooWorkspace* proto, const char* pdfNameChar, std::map<std::string,std::string> renameMap);
    
    static void EditSyst(RooWorkspace* proto, const char* pdfNameChar, 
			 std::map<std::string,double> gammaSyst, std::map<std::string,double> uniformSyst, std::map<std::string,double> logNormSyst, std::map<std::string,double> noSyst);
    
    //void FormatFrameForLikelihood(RooPlot* frame, std::string XTitle=std::string("#sigma / #sigma_{SM}"), std::string YTitle=std::string("-log likelihood"));
    
    
    void LinInterpWithConstraint(RooWorkspace* proto, TH1* nominal, std::vector<TH1*> lowHist, std::vector<TH1*> highHist,
				 std::vector<std::string> sourceName, std::string prefix, std::string productPrefix, std::string systTerm,
				 int lowBin, int highBin, std::vector<std::string>& likelihoodTermNames);
    
    TDirectory* Makedirs( TDirectory* file, std::vector<std::string> names );
    
    RooWorkspace* MakeSingleChannelModel(std::vector<RooStats::HistFactory::EstimateSummary> summary, std::vector<std::string> systToFix, bool doRatio=false);
    
    void  MakeTotalExpected(RooWorkspace* proto, std::string totName, std::string /**/, std::string /**/,
			    int lowBin, int highBin, std::vector<std::string>& syst_x_expectedPrefixNames,
			    std::vector<std::string>& normByNames);
    
    TDirectory* Mkdir( TDirectory * file, std::string name );
    
    static void PrintCovarianceMatrix(RooFitResult* result, RooArgSet* params, std::string filename);
    void ProcessExpectedHisto(TH1* hist,RooWorkspace* proto, std::string prefix, std::string productPrefix, std::string systTerm, double low, double high, int lowBin, int highBin);
    void SetObsToExpected(RooWorkspace* proto, std::string obsPrefix, std::string expPrefix, int lowBin, int highBin);
    //void FitModel(const std::string& FileNamePrefix, RooWorkspace *, std::string, std::string, TFile*, FILE*);
    //std::string FilePrefixStr(std::string);
    
    TH1* MakeScaledUncertaintyHist( const std::string& Name, std::vector< std::pair<TH1*,TH1*> > HistVec );
    TH1* MakeAbsolUncertaintyHist( const std::string& Name, const TH1* Hist );
    RooArgList createStatConstraintTerms( RooWorkspace* proto, std::vector<std::string>& constraintTerms, ParamHistFunc& paramHist, TH1* uncertHist, 
					  EstimateSummary::ConstraintType type, Double_t minSigma );
    
    inline void SetObsNameVec(const std::vector<std::string>& obsNameVec) { fObsNameVec = obsNameVec; }
    inline void SetObsName(const std::string& obsName) { fObsNameVec.clear(); fObsNameVec.push_back(obsName); fObsName = obsName; }
    inline void AddObsName(const std::string& obsName) { fObsNameVec.push_back(obsName); }
    
    //string fFileNamePrefix;
    //string fRowTitle;
    std::vector<std::string> fSystToFix;
    double fNomLumi, fLumiError;
    int fLowBin, fHighBin;    
    //std::stringstream fResultsPrefixStr;
    //TFile * fOut_f;
    // FILE * pFile;
    
  private:
    
    void GuessObsNameVec(TH1* hist);
    
    std::vector<std::string> fObsNameVec;
    std::string fObsName;
    std::vector<std::string> fPreprocessFunctions;
    
    ClassDef(RooStats::HistFactory::HistoToWorkspaceFactoryFast,3)
  };
  
}
}

#endif