This file is indexed.

/usr/share/avogadro/builder/amino/d-ala.zmat is in avogadro-data 1.2.0-3.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

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N    0.000000    0.000000    0.000000     0   0   0   -0.245562  N 
C    1.476870    0.000000    0.000000     1   0   0    0.084861  CA
C    1.538499  111.699687    0.000000     2   1   0    0.217436  C 
O    1.207703  129.348104   21.172179     3   2   1   -0.287218  O 
H    1.127469  108.301021  241.128641     2   1   3    0.055413  H  
H    1.017794  111.654185  294.669100     1   2   3    0.141350  HA 
C    1.528100  110.672677  121.026523     2   1   3   -0.041085  CB
H    1.097874  111.357391  175.165484     7   2   1    0.024935  HB1
H    1.101438  110.112786   55.964180     7   2   1    0.024935  HB2
H    1.096834  112.687507  296.676601     7   2   1    0.024935  HB3