This file is indexed.

/usr/share/avogadro/builder/amino/d-ser.zmat is in avogadro-data 1.2.0-3.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

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N    0.000000    0.000000    0.000000     0   0   0   -0.242989  N 
C    1.484374    0.000000    0.000000     1   0   0    0.110570  CA
C    1.535451  108.531258    0.000000     2   1   0    0.220016  CB
O    1.205718  124.730095  155.137540     3   2   1   -0.287123  OG
H    1.126613  108.309211  244.636596     2   1   3    0.057995  HA 
H    1.020871  110.603658  279.024394     1   2   3    0.141446  C 
C    1.544573  114.135193  123.143441     2   1   3    0.068103  H 1
O    1.428181  108.859336   61.377421     7   2   1   -0.392982  H 2
H    1.107758  112.476804  307.336097     7   2   1    0.057743  O 
H    1.106074  111.690650  184.686753     7   2   1    0.057743  H  
H    0.979674  110.836134   77.881044     8   7   2    0.209479  H