This file is indexed.

/usr/share/avogadro/builder/amino/l-arg.zmat is in avogadro-data 1.2.0-3.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

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N    0.000000    0.000000    0.000000     0   0   0   -0.245287  N 
C    1.460033    0.000000    0.000000     1   0   0    0.087598  CA
C    1.539554  106.312610    0.000000     2   1   0    0.217712  C 
O    1.230154  122.878841  338.203794     3   2   1   -0.287208  O 
C    1.535936  110.553877  238.223887     2   1   3   -0.030554  CB 
H    1.097867  110.007613   72.158757     5   2   1    0.028431  1HB 
H    1.097312  109.398137  315.825045     5   2   1    0.028431  2HB 
C    1.528672  113.258329  194.910836     5   2   1   -0.063684  CG 
H    1.096999  110.097377   50.045580     8   5   2    0.024875  1HG 
H    1.095110  110.235680  292.387836     8   5   2    0.024875  2HG
C    1.525231  111.480325  171.320725     8   5   2   -0.067992  CD 
H    1.094751  111.003662   59.552416    11   8   5    0.008551  1HD 
H    1.093892  110.417900  298.964474    11   8   5    0.008551  2HD 
N    1.462863  108.210798  178.109030    11   8   5    0.408051  NE 
H    1.016892  117.401948  315.255651    14  11   8   -0.051997  HE 
C    1.356669  125.348935  136.455894    14  11   8    0.055476  CZ 
N    1.305481  129.699692  179.371234    16  14  11   -0.355338  NH1 
H    1.028814  157.338515  178.875795    17  15  14    0.102032  HH1 
H    1.028814  120.050000    0.500000    17  16  14    0.102032  1HH1
N    1.268681  129.658960    0.439459    16  14  11   -0.325793  NH2 
H    1.003605  121.825737    0.411366    20  16  14    0.118110  1HH2
H    1.008513  117.473869  180.154058    20  16  14    0.118110  2HH2 
H    1.017157  117.178252   17.311168     1   2   3    0.141360  H  
H    1.096476  107.659390  116.924543     2   1   3    0.055689  HA