This file is indexed.

/usr/bin/check_tradis_tags is in bio-tradis 1.3.3+dfsg-3.

This file is owned by root:root, with mode 0o755.

The actual contents of the file can be viewed below.

 1
 2
 3
 4
 5
 6
 7
 8
 9
10
11
12
13
14
15
16
17
18
19
20
#!/usr/bin/env perl

package Bio::Tradis::Bin::DetectTags;

# ABSTRACT: check if tr tag is present
# PODNAME: check_tags

=head1 SYNOPSIS

Checks the presence of tr/tq tags in a given BAM file

=cut

BEGIN { unshift( @INC, '../lib' ) }
BEGIN { unshift( @INC, './lib' ) }
BEGIN { unshift( @INC, '/software/pathogen/internal/prod/lib/' ) }

use Bio::Tradis::CommandLine::CheckTags;

Bio::Tradis::CommandLine::CheckTags->new(args => \@ARGV, script_name => $0)->run;