About

This package is 46.5 KB. It is available at http://archive.ubuntu.com/ubuntu/pool/universe/f/fastaq/fastaq_3.17.0-1_all.deb .

View its full control file here: debian/control.

Description

FASTA and FASTQ file manipulation tools

Relations

This package does not recommend any other package.

This package does not suggest any other package.

This package does not conflict with any other package.

Package Contents

This package is indexed.

fastaq 3.17.0-1 is in ubuntu - bionic / universe. This package's architecture is: architectureless.

File Mime Type Owner Mode Size
postinst text/x-shellscript N/A N/A 165 bytes
prerm text/x-shellscript N/A N/A 387 bytes
/usr/ root:root 0o755
/usr/bin/ root:root 0o755
/usr/bin/fastaq text/x-python root:root 0o755 4.1 KB
/usr/lib/ root:root 0o755
/usr/lib/python3/ root:root 0o755
/usr/lib/python3/dist-packages/ root:root 0o755
/usr/lib/python3/dist-packages/pyfastaq/ root:root 0o755
/usr/lib/python3/dist-packages/pyfastaq-3.17.0.egg-info/ root:root 0o755
/usr/lib/python3/dist-packages/pyfastaq-3.17.0.egg-info/dependency_links.txt application/octet-stream root:root 0o644 1 byte
/usr/lib/python3/dist-packages/pyfastaq-3.17.0.egg-info/PKG-INFO text/plain root:root 0o644 568 bytes
/usr/lib/python3/dist-packages/pyfastaq-3.17.0.egg-info/top_level.txt text/plain root:root 0o644 9 bytes
/usr/lib/python3/dist-packages/pyfastaq/caf.py text/x-c++ root:root 0o644 2.0 KB
/usr/lib/python3/dist-packages/pyfastaq/genetic_codes.py text/plain root:root 0o644 2.5 KB
/usr/lib/python3/dist-packages/pyfastaq/__init__.py text/x-python root:root 0o644 284 bytes
/usr/lib/python3/dist-packages/pyfastaq/intervals.py text/x-c++ root:root 0o644 3.7 KB
/usr/lib/python3/dist-packages/pyfastaq/runners/ root:root 0o755
/usr/lib/python3/dist-packages/pyfastaq/runners/acgtn_only.py text/x-python root:root 0o644 463 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/add_indels.py text/x-python root:root 0o644 4.1 KB
/usr/lib/python3/dist-packages/pyfastaq/runners/caf_to_fastq.py text/x-python root:root 0o644 894 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/capillary_to_pairs.py text/x-python root:root 0o644 714 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/chunker.py text/x-python root:root 0o644 1.5 KB
/usr/lib/python3/dist-packages/pyfastaq/runners/count_sequences.py text/x-python root:root 0o644 379 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/deinterleave.py text/x-python root:root 0o644 831 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/enumerate_names.py text/x-python root:root 0o644 1.1 KB
/usr/lib/python3/dist-packages/pyfastaq/runners/expand_nucleotides.py text/x-python root:root 0o644 609 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/fasta_to_fastq.py text/x-python root:root 0o644 587 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/filter.py text/x-python root:root 0o644 2.0 KB
/usr/lib/python3/dist-packages/pyfastaq/runners/get_ids.py text/x-python root:root 0o644 433 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/get_seq_flanking_gaps.py text/x-python root:root 0o644 733 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/__init__.py application/x-empty root:root 0o644 0 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/interleave.py text/x-python root:root 0o644 871 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/make_random_contigs.py text/x-python root:root 0o644 1.3 KB
/usr/lib/python3/dist-packages/pyfastaq/runners/merge.py text/x-python root:root 0o644 581 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/replace_bases.py text/x-python root:root 0o644 574 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/reverse_complement.py text/x-python root:root 0o644 423 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/scaffolds_to_contigs.py text/x-python root:root 0o644 704 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/search_for_seq.py text/x-python root:root 0o644 757 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/sequence_trim.py text/x-python root:root 0o644 1.5 KB
/usr/lib/python3/dist-packages/pyfastaq/runners/sort_by_name.py text/x-python root:root 0o644 433 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/sort_by_size.py text/x-python root:root 0o644 618 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/split_by_base_count.py text/x-python root:root 0o644 939 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/strip_illumina_suffix.py text/x-python root:root 0o644 429 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/to_boulderio.py text/x-python root:root 0o644 483 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/to_fake_qual.py text/x-python root:root 0o644 596 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/to_fasta.py text/x-python root:root 0o644 1.1 KB
/usr/lib/python3/dist-packages/pyfastaq/runners/to_mira_xml.py text/x-python root:root 0o644 428 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/to_orfs_gff.py text/x-python root:root 0o644 651 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/to_perfect_reads.py text/x-python root:root 0o644 4.1 KB
/usr/lib/python3/dist-packages/pyfastaq/runners/to_random_subset.py text/x-python root:root 0o644 1.6 KB
/usr/lib/python3/dist-packages/pyfastaq/runners/to_tiling_bam.py text/x-python root:root 0o644 3.1 KB
/usr/lib/python3/dist-packages/pyfastaq/runners/to_unique_by_id.py text/x-python root:root 0o644 593 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/translate.py text/x-python root:root 0o644 627 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/trim_contigs.py text/x-python root:root 0o644 766 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/trim_ends.py text/x-python root:root 0o644 648 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/trim_Ns_at_end.py text/x-python root:root 0o644 507 bytes
/usr/lib/python3/dist-packages/pyfastaq/runners/version.py text/x-python root:root 0o644 71 bytes
/usr/lib/python3/dist-packages/pyfastaq/sequences.py text/x-c++ root:root 0o644 24.5 KB
/usr/lib/python3/dist-packages/pyfastaq/tasks.py text/x-c++ root:root 0o644 28.6 KB
/usr/lib/python3/dist-packages/pyfastaq/utils.py text/x-c++ root:root 0o644 2.2 KB
/usr/share/ root:root 0o755
/usr/share/doc/ root:root 0o755
/usr/share/doc/fastaq/ root:root 0o755
/usr/share/doc/fastaq/changelog.Debian.gz application/gzip root:root 0o644 721 bytes
/usr/share/doc/fastaq/copyright text/plain root:root 0o644 1.1 KB
/usr/share/man/ root:root 0o755
/usr/share/man/man1/ root:root 0o755
/usr/share/man/man1/fastaq.1.gz application/gzip root:root 0o644 1.4 KB
/usr/share/man/man1/fastaq-acgtn_only.1.gz application/gzip root:root 0o644 357 bytes
/usr/share/man/man1/fastaq-add_indels.1.gz application/gzip root:root 0o644 655 bytes
/usr/share/man/man1/fastaq-caf_to_fastq.1.gz application/gzip root:root 0o644 462 bytes
/usr/share/man/man1/fastaq-capillary_to_pairs.1.gz application/gzip root:root 0o644 494 bytes
/usr/share/man/man1/fastaq-chunker.1.gz application/gzip root:root 0o644 583 bytes
/usr/share/man/man1/fastaq-count_sequences.1.gz application/gzip root:root 0o644 324 bytes
/usr/share/man/man1/fastaq-deinterleave.1.gz application/gzip root:root 0o644 465 bytes
/usr/share/man/man1/fastaq-enumerate_names.1.gz application/gzip root:root 0o644 517 bytes
/usr/share/man/man1/fastaq-expand_nucleotides.1.gz application/gzip root:root 0o644 427 bytes
/usr/share/man/man1/fastaq-fasta_to_fastq.1.gz application/gzip root:root 0o644 340 bytes
/usr/share/man/man1/fastaq-filter.1.gz application/gzip root:root 0o644 693 bytes
/usr/share/man/man1/fastaq-get_ids.1.gz application/gzip root:root 0o644 327 bytes
/usr/share/man/man1/fastaq-get_seq_flanking_gaps.1.gz application/gzip root:root 0o644 397 bytes
/usr/share/man/man1/fastaq-interleave.1.gz application/gzip root:root 0o644 438 bytes
/usr/share/man/man1/fastaq-make_random_contigs.1.gz application/gzip root:root 0o644 607 bytes
/usr/share/man/man1/fastaq-merge.1.gz application/gzip root:root 0o644 355 bytes
/usr/share/man/man1/fastaq-replace_bases.1.gz application/gzip root:root 0o644 369 bytes
/usr/share/man/man1/fastaq-reverse_complement.1.gz application/gzip root:root 0o644 327 bytes
/usr/share/man/man1/fastaq-scaffolds_to_contigs.1.gz application/gzip root:root 0o644 423 bytes
/usr/share/man/man1/fastaq-search_for_seq.1.gz application/gzip root:root 0o644 479 bytes
/usr/share/man/man1/fastaq-sequence_trim.1.gz application/gzip root:root 0o644 615 bytes
/usr/share/man/man1/fastaq-sort_by_name.1.gz application/gzip root:root 0o644 334 bytes
/usr/share/man/man1/fastaq-sort_by_size.1.gz application/gzip root:root 0o644 382 bytes
/usr/share/man/man1/fastaq-split_by_base_count.1.gz application/gzip root:root 0o644 488 bytes
/usr/share/man/man1/fastaq-strip_illumina_suffix.1.gz application/gzip root:root 0o644 365 bytes
/usr/share/man/man1/fastaq-to_boulderio.1.gz application/gzip root:root 0o644 362 bytes
/usr/share/man/man1/fastaq-to_fake_qual.1.gz application/gzip root:root 0o644 363 bytes
/usr/share/man/man1/fastaq-to_fasta.1.gz application/gzip root:root 0o644 540 bytes
/usr/share/man/man1/fastaq-to_mira_xml.1.gz application/gzip root:root 0o644 350 bytes
/usr/share/man/man1/fastaq-to_orfs_gff.1.gz application/gzip root:root 0o644 396 bytes
/usr/share/man/man1/fastaq-to_perfect_reads.1.gz application/gzip root:root 0o644 667 bytes
/usr/share/man/man1/fastaq-to_random_subset.1.gz application/gzip root:root 0o644 543 bytes
/usr/share/man/man1/fastaq-to_tiling_bam.1.gz application/gzip root:root 0o644 598 bytes
/usr/share/man/man1/fastaq-to_unique_by_id.1.gz application/gzip root:root 0o644 427 bytes
/usr/share/man/man1/fastaq-translate.1.gz application/gzip root:root 0o644 392 bytes
/usr/share/man/man1/fastaq-trim_contigs.1.gz application/gzip root:root 0o644 468 bytes
/usr/share/man/man1/fastaq-trim_ends.1.gz application/gzip root:root 0o644 372 bytes
/usr/share/man/man1/fastaq-trim_Ns_at_end.1.gz application/gzip root:root 0o644 385 bytes
/usr/share/man/man1/fastaq-version.1.gz application/gzip root:root 0o644 195 bytes