This file is indexed.

/etc/getData.conf.d/Ensembl_genome.mk is in getdata 0.2-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

1
2
3
4
5
6
7
8
9
SHARED_WGET_OPTIONS=$(shell getData --getWgetOptions)

MIRROR = ftp://ftp.ensembl.org/pub/current_fasta

get:
	wget $(SHARED_WGET_OPTIONS) $(MIRROR)/$(ORGANISM_L)/dna/$(ORGANISM).$(BUILD).dna.chromosome.*.fa.gz

unpack:
	for file in *chromosome.*.fa.gz ; do zcat $$file > `basename $$file .gz` ; done