About

This package is 1.4 MB. It is available at http://archive.ubuntu.com/ubuntu/pool/universe/h/hmmer2/hmmer2_2.3.2+dfsg-5_amd64.deb .

View its full control file here: debian/control.

Description

profile hidden Markov models for protein sequence analysis

Relations

This package depends on: libc6 (>= 2.7), libpvm3, libsquid1.

This package recommends: biosquid.

This package suggests: hmmer2-doc (>= 2.3.2+dfsg-5), hmmer2-pvm (>= 2.3.2+dfsg-5).

This package does not conflict with any other package.

Package Contents

This package is indexed.

hmmer2 2.3.2+dfsg-5 is in ubuntu - bionic / universe. This package's architecture is: amd64.

File Mime Type Owner Mode Size
/usr/ root:root 0o755
/usr/bin/ root:root 0o755
/usr/bin/hmm2align application/x-sharedlib root:root 0o755 174.9 KB
/usr/bin/hmm2build application/x-sharedlib root:root 0o755 188.9 KB
/usr/bin/hmm2calibrate application/x-sharedlib root:root 0o755 178.8 KB
/usr/bin/hmm2convert application/x-sharedlib root:root 0o755 170.7 KB
/usr/bin/hmm2emit application/x-sharedlib root:root 0o755 174.6 KB
/usr/bin/hmm2fetch application/x-sharedlib root:root 0o755 170.3 KB
/usr/bin/hmm2index application/x-sharedlib root:root 0o755 170.2 KB
/usr/bin/hmm2pfam application/x-sharedlib root:root 0o755 183.7 KB
/usr/bin/hmm2search application/x-sharedlib root:root 0o755 183.5 KB
/usr/lib/ root:root 0o755
/usr/lib/hmmer2/ root:root 0o755
/usr/lib/hmmer2/hmmindex root:root 0o777
/usr/lib/hmmer2/hmmpfam root:root 0o777
/usr/share/ root:root 0o755
/usr/share/doc/ root:root 0o755
/usr/share/doc/hmmer2/ root:root 0o755
/usr/share/doc/hmmer2/00README.gz root:root 0o777
/usr/share/doc/hmmer2/changelog.Debian.gz application/gzip root:root 0o644 1.1 KB
/usr/share/doc/hmmer2/copyright text/plain root:root 0o644 1.3 KB
/usr/share/doc/hmmer2/examples/ root:root 0o755
/usr/share/doc/hmmer2/examples/alignalign_test.c.gz application/gzip root:root 0o644 2.6 KB
/usr/share/doc/hmmer2/examples/alignalign_test.gz application/gzip root:root 0o644 180.2 KB
/usr/share/doc/hmmer2/examples/alignalign_test.o.gz application/gzip root:root 0o644 10.9 KB
/usr/share/doc/hmmer2/examples/evd_test.c.gz application/gzip root:root 0o644 3.0 KB
/usr/share/doc/hmmer2/examples/evd_test.gz application/gzip root:root 0o644 35.5 KB
/usr/share/doc/hmmer2/examples/evd_test.o.gz application/gzip root:root 0o644 12.2 KB
/usr/share/doc/hmmer2/examples/exercises-pvm.sqc text/plain root:root 0o644 592 bytes
/usr/share/doc/hmmer2/examples/exercises.sqc.gz application/gzip root:root 0o644 1.5 KB
/usr/share/doc/hmmer2/examples/exercises-threaded.sqc text/plain root:root 0o644 548 bytes
/usr/share/doc/hmmer2/examples/fitting_test.c text/x-c root:root 0o644 1.6 KB
/usr/share/doc/hmmer2/examples/fn3-bin.gz application/gzip root:root 0o644 7.4 KB
/usr/share/doc/hmmer2/examples/fn3-bin-swap.gz application/gzip root:root 0o644 7.4 KB
/usr/share/doc/hmmer2/examples/fn3.hmm.gz application/gzip root:root 0o644 6.3 KB
/usr/share/doc/hmmer2/examples/fn3.seed.gz application/gzip root:root 0o644 8.5 KB
/usr/share/doc/hmmer2/examples/Makefile text/x-makefile root:root 0o644 1.8 KB
/usr/share/doc/hmmer2/examples/Makefile.in text/x-makefile root:root 0o644 1.7 KB
/usr/share/doc/hmmer2/examples/masks_test.c text/x-c root:root 0o644 3.8 KB
/usr/share/doc/hmmer2/examples/masks_test.gz application/gzip root:root 0o644 104.6 KB
/usr/share/doc/hmmer2/examples/masks_test.o.gz application/gzip root:root 0o644 8.7 KB
/usr/share/doc/hmmer2/examples/Optiontests.fa text/plain root:root 0o644 392 bytes
/usr/share/doc/hmmer2/examples/Optiontests.nfa text/plain root:root 0o644 126 bytes
/usr/share/doc/hmmer2/examples/Optiontests.nslx text/plain root:root 0o644 168 bytes
/usr/share/doc/hmmer2/examples/Optiontests.pam text/plain root:root 0o644 2.1 KB
/usr/share/doc/hmmer2/examples/Optiontests.pri text/plain root:root 0o644 2.8 KB
/usr/share/doc/hmmer2/examples/Optiontests.slx text/plain root:root 0o644 297 bytes
/usr/share/doc/hmmer2/examples/Optiontests.sto text/plain root:root 0o644 3.2 KB
/usr/share/doc/hmmer2/examples/parsingviterbi_test.c.gz application/gzip root:root 0o644 2.0 KB
/usr/share/doc/hmmer2/examples/parsingviterbi_test.gz application/gzip root:root 0o644 179.9 KB
/usr/share/doc/hmmer2/examples/parsingviterbi_test.o.gz application/gzip root:root 0o644 10.5 KB
/usr/share/doc/hmmer2/examples/README text/plain root:root 0o644 2.6 KB
/usr/share/doc/hmmer2/examples/sqc.gz application/gzip root:root 0o644 5.6 KB
/usr/share/doc/hmmer2/examples/test1-conversion.pl text/x-perl root:root 0o755 876 bytes
/usr/share/doc/hmmer2/examples/titin.fa.gz application/gzip root:root 0o644 14.8 KB
/usr/share/doc/hmmer2/examples/tophits_test.c.gz application/gzip root:root 0o644 1.7 KB
/usr/share/doc/hmmer2/examples/tophits_test.gz application/gzip root:root 0o644 17.5 KB
/usr/share/doc/hmmer2/examples/tophits_test.o.gz application/gzip root:root 0o644 7.7 KB
/usr/share/doc/hmmer2/examples/trace_test.c.gz application/gzip root:root 0o644 1.7 KB
/usr/share/doc/hmmer2/examples/trace_test.gz application/gzip root:root 0o644 179.5 KB
/usr/share/doc/hmmer2/examples/trace_test.hmm.gz application/gzip root:root 0o644 1.1 KB
/usr/share/doc/hmmer2/examples/trace_test.o.gz application/gzip root:root 0o644 9.8 KB
/usr/share/doc/hmmer2/examples/trace_test.seq text/plain root:root 0o644 514 bytes
/usr/share/doc/hmmer2/examples/trace_test.slx text/plain root:root 0o644 112 bytes
/usr/share/doc/hmmer2/examples/tutorial/ root:root 0o755
/usr/share/doc/hmmer2/examples/tutorial/amino.null text/plain root:root 0o644 418 bytes
/usr/share/doc/hmmer2/examples/tutorial/amino.pri text/plain root:root 0o644 2.9 KB
/usr/share/doc/hmmer2/examples/tutorial/Artemia.fa text/plain root:root 0o644 1.5 KB
/usr/share/doc/hmmer2/examples/tutorial/fn3.sto.gz application/gzip root:root 0o644 10.8 KB
/usr/share/doc/hmmer2/examples/tutorial/globins50.msf.gz application/gzip root:root 0o644 4.5 KB
/usr/share/doc/hmmer2/examples/tutorial/globins630.fa.gz application/gzip root:root 0o644 23.0 KB
/usr/share/doc/hmmer2/examples/tutorial/nucleic.null text/plain root:root 0o644 195 bytes
/usr/share/doc/hmmer2/examples/tutorial/nucleic.pri text/plain root:root 0o644 745 bytes
/usr/share/doc/hmmer2/examples/tutorial/pkinase.sto.gz application/gzip root:root 0o644 18.3 KB
/usr/share/doc/hmmer2/examples/tutorial/rrm.hmm.gz application/gzip root:root 0o644 5.9 KB
/usr/share/doc/hmmer2/examples/tutorial/rrm.sto.gz application/gzip root:root 0o644 5.7 KB
/usr/share/doc/hmmer2/examples/viterbi_exercise.c.gz application/gzip root:root 0o644 2.0 KB
/usr/share/doc/hmmer2/examples/viterbi_exercise.gz application/gzip root:root 0o644 189.6 KB
/usr/share/doc/hmmer2/examples/viterbi_exercise.o.gz application/gzip root:root 0o644 9.6 KB
/usr/share/doc/hmmer2/examples/weeviterbi_test.c.gz application/gzip root:root 0o644 1.8 KB
/usr/share/doc/hmmer2/examples/weeviterbi_test.gz application/gzip root:root 0o644 179.8 KB
/usr/share/doc/hmmer2/examples/weeviterbi_test.hmm.gz application/gzip root:root 0o644 5.1 KB
/usr/share/doc/hmmer2/examples/weeviterbi_test.o.gz application/gzip root:root 0o644 10.4 KB
/usr/share/doc/hmmer2/examples/weeviterbi_test.seq text/plain root:root 0o644 535 bytes
/usr/share/doc/hmmer2/NEWS.Debian.gz application/gzip root:root 0o644 344 bytes
/usr/share/doc/hmmer2/NOTES.gz application/gzip root:root 0o644 2.1 KB
/usr/share/doc/hmmer2/README.Debian text/plain root:root 0o644 615 bytes
/usr/share/man/ root:root 0o755
/usr/share/man/man1/ root:root 0o755
/usr/share/man/man1/hmm2align.1.gz application/gzip root:root 0o644 1.7 KB
/usr/share/man/man1/hmm2build.1.gz application/gzip root:root 0o644 4.7 KB
/usr/share/man/man1/hmm2calibrate.1.gz application/gzip root:root 0o644 1.7 KB
/usr/share/man/man1/hmm2convert.1.gz application/gzip root:root 0o644 1.1 KB
/usr/share/man/man1/hmm2emit.1.gz application/gzip root:root 0o644 1.3 KB
/usr/share/man/man1/hmm2fetch.1.gz application/gzip root:root 0o644 945 bytes
/usr/share/man/man1/hmm2index.1.gz application/gzip root:root 0o644 752 bytes
/usr/share/man/man1/hmm2pfam.1.gz application/gzip root:root 0o644 3.3 KB
/usr/share/man/man1/hmm2search.1.gz application/gzip root:root 0o644 3.0 KB
/usr/share/man/man1/hmmer2.1.gz application/gzip root:root 0o644 1.7 KB