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19019 | <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
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<title>Index (ImageJ API)</title>
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<div class="contentContainer"><a href="#I:A">A</a> <a href="#I:B">B</a> <a href="#I:C">C</a> <a href="#I:D">D</a> <a href="#I:E">E</a> <a href="#I:F">F</a> <a href="#I:G">G</a> <a href="#I:H">H</a> <a href="#I:I">I</a> <a href="#I:J">J</a> <a href="#I:K">K</a> <a href="#I:L">L</a> <a href="#I:M">M</a> <a href="#I:N">N</a> <a href="#I:O">O</a> <a href="#I:P">P</a> <a href="#I:Q">Q</a> <a href="#I:R">R</a> <a href="#I:S">S</a> <a href="#I:T">T</a> <a href="#I:U">U</a> <a href="#I:V">V</a> <a href="#I:W">W</a> <a href="#I:X">X</a> <a href="#I:Y">Y</a> <a href="#I:Z">Z</a> <a name="I:A">
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<h2 class="title">A</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#ABGR">ABGR</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">32-bit interleaved ABGR.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Macro.html#abort--">abort()</a></span> - Static method in class ij.<a href="ij/Macro.html" title="class in ij">Macro</a></dt>
<dd>
<div class="block">Aborts the currently running macro or any plugin using IJ.run().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#abort--">abort()</a></span> - Static method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd>
<div class="block">Aborts currently running macro.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#abort-ij.macro.Interpreter-">abort(Interpreter)</a></span> - Static method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd>
<div class="block">Absolete, replaced by abortMacro().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#abort--">abort()</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Aborts minimization.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#ABORTED">ABORTED</a></span> - Static variable in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Status returned: aborted by call to abort method.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#abortMacro--">abortMacro()</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd>
<div class="block">Aborts this macro.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#abortPaste--">abortPaste()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#ABOUT_MENU">ABOUT_MENU</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/AboutBox.html" title="class in ij.plugin"><span class="typeNameLink">AboutBox</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Help/About ImageJ command by opening
the about.jpg in ij.jar, scaling it 400% and adding some text.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AboutBox.html#AboutBox--">AboutBox()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/AboutBox.html" title="class in ij.plugin">AboutBox</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#ABS">ABS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#abs--">abs()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#abs--">abs()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">If this is a 32-bit or signed 16-bit image, performs an
absolute value transform, otherwise does nothing.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#abs--">abs()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Compiler.html#accept-java.io.File-java.lang.String-">accept(File, String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Compiler.html" title="class in ij.plugin">Compiler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#ACOS">ACOS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HTMLDialog.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/HTMLDialog.html" title="class in ij.gui">HTMLDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MessageDialog.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/MessageDialog.html" title="class in ij.gui">MessageDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/NonBlockingGenericDialog.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/NonBlockingGenericDialog.html" title="class in ij.gui">NonBlockingGenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Called if user has activated a button or popup menu item</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/SaveChangesDialog.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/SaveChangesDialog.html" title="class in ij.gui">SaveChangesDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/WaitForUserDialog.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/WaitForUserDialog.html" title="class in ij.gui">WaitForUserDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/YesNoCancelDialog.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui">YesNoCancelDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Handle menu events.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BatchConverter.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/BatchConverter.html" title="class in ij.plugin">BatchConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BatchProcessor.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/BatchProcessor.html" title="class in ij.plugin">BatchProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Calibrator.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Calibrator.html" title="class in ij.plugin.filter">Calibrator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Convolver.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Convolver.html" title="class in ij.plugin.filter">Convolver</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Channels.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Channels.html" title="class in ij.plugin.frame">Channels</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ColorThresholder.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ColorThresholder.html" title="class in ij.plugin.frame">ColorThresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ContrastAdjuster.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ContrastAdjuster.html" title="class in ij.plugin.frame">ContrastAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Fitter.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Fitter.html" title="class in ij.plugin.frame">Fitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Implementation of ActionListener interface.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/LUT_Editor.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/LUT_Editor.html" title="class in ij.plugin">LUT_Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#actionPerformed-java.awt.event.ActionEvent-">actionPerformed(ActionEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#add-java.awt.Component-">add(Component)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#add-ij.gui.Roi-">add(Roi)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Adds an ROI to this Overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#add-ij.gui.Roi-java.lang.String-">add(Roi, String)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Adds an ROI to this Overlay using the specified name.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#add-java.lang.String-double:A-double:A-">add(String, double[], double[])</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/SaltAndPepper.html#add-ij.process.ImageProcessor-double-">add(ImageProcessor, double)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/SaltAndPepper.html" title="class in ij.plugin.filter">SaltAndPepper</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#add-ij.ImagePlus-ij.gui.Roi-int-">add(ImagePlus, Roi, int)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Adds the specified ROI to the list.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#ADD">ADD</a></span> - Static variable in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">dst=dst+src</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#add-int-">add(int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#add-double-">add(double)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#add-int-">add(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Adds 'value' to each pixel in the image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#add-double-">add(double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Adds 'value' to each pixel in the image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#add-int-">add(int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#add-double-">add(double)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#ADD_TO_MANAGER">ADD_TO_MANAGER</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Add particles to ROI Manager.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#ADD_TO_OVERLAY">ADD_TO_OVERLAY</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#addAdjustmentListener-java.awt.event.AdjustmentListener-">addAdjustmentListener(AdjustmentListener)</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#addBatchModeImage-ij.ImagePlus-">addBatchModeImage(ImagePlus)</a></span> - Static method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#addChar-char-">addChar(char)</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">This method is used by the text tool to add typed
characters to displayed text selections.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addCheckbox-java.lang.String-boolean-">addCheckbox(String, boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds a checkbox.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addCheckboxGroup-int-int-java.lang.String:A-boolean:A-">addCheckboxGroup(int, int, String[], boolean[])</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds a group of checkboxs using a grid layout.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addCheckboxGroup-int-int-java.lang.String:A-boolean:A-java.lang.String:A-">addCheckboxGroup(int, int, String[], boolean[], String[])</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds a group of checkboxs using a grid layout.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addChoice-java.lang.String-java.lang.String:A-java.lang.String-">addChoice(String, String[], String)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds a popup menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#addColumns--">addColumns()</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Obsolete; the addValue() method automatically adds columns as needed.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Executer.html#addCommandListener-ij.CommandListener-">addCommandListener(CommandListener)</a></span> - Static method in class ij.<a href="ij/Executer.html" title="class in ij">Executer</a></dt>
<dd>
<div class="block">Adds the specified command listener.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addDialogListener-ij.gui.DialogListener-">addDialogListener(DialogListener)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Add an Object implementing the DialogListener interface.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#addElement-ij.gui.Roi-">addElement(Roi)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Adds an ROI to this Overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#addErrorBars-float:A-">addErrorBars(float[])</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adds vertical error bars to the last data passed to the plot (via the constructor or addPoints).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#addErrorBars-double:A-">addErrorBars(double[])</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adds vertical error bars to the last data passed to the plot (via the constructor or addPoints).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#addErrorBars-java.lang.String-float:A-">addErrorBars(String, float[])</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">This is a version of addErrorBars that works with JavaScript.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#addErrorBars-float:A-">addErrorBars(float[])</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">use the corresponding method of the Plot class</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#addEventListener-ij.IJEventListener-">addEventListener(IJEventListener)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addHelp-java.lang.String-">addHelp(String)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds a "Help" button that opens the specified URL in the default browser.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#addHorizontalErrorBars-double:A-">addHorizontalErrorBars(double[])</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adds horizontal error bars to the last data passed to the plot (via the constructor or addPoints).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addImage-ij.ImagePlus-">addImage(ImagePlus)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds an image to the dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FileInfoVirtualStack.html#addImage-ij.io.FileInfo-">addImage(FileInfo)</a></span> - Method in class ij.plugin.<a href="ij/plugin/FileInfoVirtualStack.html" title="class in ij.plugin">FileInfoVirtualStack</a></dt>
<dd>
<div class="block">Adds an image to this stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#addImageListener-ij.ImageListener-">addImageListener(ImageListener)</a></span> - Static method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#addKeyListener-java.awt.event.KeyListener-">addKeyListener(KeyListener)</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#addKeyListener-java.awt.event.KeyListener-">addKeyListener(KeyListener)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Unused keyPressed and keyTyped events will be passed to 'listener'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#addLabel-double-double-java.lang.String-">addLabel(double, double, String)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Draws text at the specified location, where (0,0)
is the upper left corner of the the plot frame and (1,1) is
the lower right corner.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#addLabel-double-double-java.lang.String-">addLabel(double, double, String)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">use the corresponding method of the Plot class</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#addLabel-java.lang.String-">addLabel(String)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Adds a label to the beginning of the current row.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#addLabel-java.lang.String-java.lang.String-">addLabel(String, String)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">Replaced by setValue(String,int,String)</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageLayout.html#addLayoutComponent-java.lang.String-java.awt.Component-">addLayoutComponent(String, Component)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageLayout.html" title="class in ij.gui">ImageLayout</a></dt>
<dd>
<div class="block">Not used by this class.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#addLegend-java.lang.String-">addLegend(String)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adds an automatically positioned legend, where 'labels' can be a
newline-delimited list of curve or point labels in the sequence these data were added.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#addLegend-java.lang.String-java.lang.String-">addLegend(String, String)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adds a legend at the position given in 'options', where 'labels' is a can be a
newline-delimited list of curve or point labels in the sequence these data were added.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#addMacroTool-java.lang.String-ij.plugin.MacroInstaller-int-">addMacroTool(String, MacroInstaller, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Used by the MacroInstaller class to install a set of macro tools.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#addMacroTool-java.lang.String-ij.plugin.MacroInstaller-">addMacroTool(String, MacroInstaller)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Used by the MacroInstaller class to add a macro tool to the toolbar.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addMessage-java.lang.String-">addMessage(String)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds a message consisting of one or more lines of text.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addMessage-java.lang.String-java.awt.Font-">addMessage(String, Font)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds a message consisting of one or more lines of text,
which will be displayed using the specified font.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addMessage-java.lang.String-java.awt.Font-java.awt.Color-">addMessage(String, Font, Color)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds a message consisting of one or more lines of text,
which will be displayed using the specified font and color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#addMouseListener-java.awt.event.MouseListener-">addMouseListener(MouseListener)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MultiLineLabel.html#addNotify--">addNotify()</a></span> - Method in class ij.gui.<a href="ij/gui/MultiLineLabel.html" title="class in ij.gui">MultiLineLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addNumericField-java.lang.String-double-int-">addNumericField(String, double, int)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds a numeric field.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addNumericField-java.lang.String-double-int-int-java.lang.String-">addNumericField(String, double, int, int, String)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds a numeric field.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#addOffset--">addOffset()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#addOpenRecentItem-java.lang.String-">addOpenRecentItem(String)</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Adds a file path to the beginning of the File/Open Recent submenu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addPanel-java.awt.Panel-">addPanel(Panel)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds a Panel to the dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addPanel-java.awt.Panel-int-java.awt.Insets-">addPanel(Panel, int, Insets)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds a Panel to the dialog with custom contraint and insets.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#addPlugInTool-ij.plugin.tool.PlugInTool-">addPlugInTool(PlugInTool)</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Adds a plugin tool to the first available toolbar slot,
or to the last slot if the toolbar is full.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#addPoint-ij.ImagePlus-double-double-">addPoint(ImagePlus, double, double)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Adds a point to this PointRoi.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#addPoint-double-double-">addPoint(double, double)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Adds a point to this PointRoi.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatPolygon.html#addPoint-float-float-">addPoint(float, float)</a></span> - Method in class ij.process.<a href="ij/process/FloatPolygon.html" title="class in ij.process">FloatPolygon</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatPolygon.html#addPoint-double-double-">addPoint(double, double)</a></span> - Method in class ij.process.<a href="ij/process/FloatPolygon.html" title="class in ij.process">FloatPolygon</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#addPoints-float:A-float:A-float:A-int-java.lang.String-">addPoints(float[], float[], float[], int, String)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adds a set of points to the plot or adds a curve if shape is set to LINE.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#addPoints-float:A-float:A-int-">addPoints(float[], float[], int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adds a set of points to the plot or adds a curve if shape is set to LINE.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#addPoints-double:A-double:A-int-">addPoints(double[], double[], int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adds a set of points to the plot using double arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#addPoints-java.lang.String-float:A-float:A-int-">addPoints(String, float[], float[], int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">This a version of addPoints that works with JavaScript.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#addPoints-java.util.ArrayList-java.util.ArrayList-int-">addPoints(ArrayList, ArrayList, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adds a set of points to the plot using double ArrayLists.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#addPoints-double:A-double:A-double:A-int-">addPoints(double[], double[], double[], int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adds a set of points to the plot or adds a curve if shape is set to LINE.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#addPoints-java.util.ArrayList-java.util.ArrayList-java.util.ArrayList-int-">addPoints(ArrayList, ArrayList, ArrayList, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adds a set of points to the plot using double ArrayLists.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#addPoints-float:A-float:A-int-">addPoints(float[], float[], int)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">use the corresponding method of the Plot class</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#addPoints-double:A-double:A-int-">addPoints(double[], double[], int)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">use the corresponding method of the Plot class</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addPreviewCheckbox-ij.plugin.filter.PlugInFilterRunner-">addPreviewCheckbox(PlugInFilterRunner)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds a checkbox labelled "Preview" for "automatic" preview.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addPreviewCheckbox-ij.plugin.filter.PlugInFilterRunner-java.lang.String-">addPreviewCheckbox(PlugInFilterRunner, String)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Add the preview checkbox with user-defined label; for details see the
addPreviewCheckbox method with standard "Preview" label.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addRadioButtonGroup-java.lang.String-java.lang.String:A-int-int-java.lang.String-">addRadioButtonGroup(String, String[], int, int, String)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds a radio button group.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#addResults--">addResults()</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Adds the last row in this table to the Results window without updating it.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#addRoi-ij.gui.Roi-">addRoi(Roi)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Adds the specified ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#addRoiListener-ij.gui.RoiListener-">addRoiListener(RoiListener)</a></span> - Static method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#addSlice-java.lang.String-java.lang.Object-">addSlice(String, Object)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Adds an image in the form of a pixel array to the end of the stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#addSlice-ij.process.ImageProcessor-">addSlice(ImageProcessor)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Adds the image in 'ip' to the end of the stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#addSlice-java.lang.String-ij.process.ImageProcessor-">addSlice(String, ImageProcessor)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Adds the image in 'ip' to the end of the stack, setting
the string 'sliceLabel' as the slice metadata.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#addSlice-java.lang.String-ij.process.ImageProcessor-int-">addSlice(String, ImageProcessor, int)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Adds the image in 'ip' to the stack following slice 'n'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#addSlice-java.lang.String-">addSlice(String)</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Adds an image to the end of the stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#addSlice-java.lang.String-java.lang.Object-">addSlice(String, Object)</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Does nothing.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#addSlice-java.lang.String-ij.process.ImageProcessor-">addSlice(String, ImageProcessor)</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Does nothing..</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#addSlice-java.lang.String-ij.process.ImageProcessor-int-">addSlice(String, ImageProcessor, int)</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Does noting.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addSlider-java.lang.String-double-double-double-">addSlider(String, double, double, double)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds a slider (scroll bar) to the dialog box.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addStringField-java.lang.String-java.lang.String-">addStringField(String, String)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds an 8 column text field.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addStringField-java.lang.String-java.lang.String-int-">addStringField(String, String, int)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds a text field.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#addText-java.lang.String-double-double-">addText(String, double, double)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#addTextAreas-java.lang.String-java.lang.String-int-int-">addTextAreas(String, String, int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Adds one or two (side by side) text areas.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#addToManager">addToManager</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#addTool-java.lang.String-">addTool(String)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Adds a tool to the toolbar.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#addUnsignedShortSlice-java.lang.String-java.lang.Object-">addUnsignedShortSlice(String, Object)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">Short images are always unsigned.</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#addValue-int-double-">addValue(int, double)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Adds a value to the end of the given column.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#addValue-java.lang.String-double-">addValue(String, double)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Adds a value to the end of the given column.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#addValue-java.lang.String-java.lang.String-">addValue(String, String)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Adds a string value to the end of the given column.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#addWindow-java.awt.Window-">addWindow(Window)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Adds the specified window to the Window menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#addWindow-java.awt.Frame-">addWindow(Frame)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Adds the specified Frame to the Window menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#adjustCalibration-ij.measure.Calibration-">adjustCalibration(Calibration)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adjusts a Calibration object to fit the current axes.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ColorChooser.html#adjustmentValueChanged-java.awt.event.AdjustmentEvent-">adjustmentValueChanged(AdjustmentEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ColorChooser.html" title="class in ij.gui">ColorChooser</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#adjustmentValueChanged-java.awt.event.AdjustmentEvent-">adjustmentValueChanged(AdjustmentEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#adjustmentValueChanged-java.awt.event.AdjustmentEvent-">adjustmentValueChanged(AdjustmentEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#adjustmentValueChanged-java.awt.event.AdjustmentEvent-">adjustmentValueChanged(AdjustmentEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ColorThresholder.html#adjustmentValueChanged-java.awt.event.AdjustmentEvent-">adjustmentValueChanged(AdjustmentEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ColorThresholder.html" title="class in ij.plugin.frame">ColorThresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ContrastAdjuster.html#adjustmentValueChanged-java.awt.event.AdjustmentEvent-">adjustmentValueChanged(AdjustmentEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ContrastAdjuster.html" title="class in ij.plugin.frame">ContrastAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/LineWidthAdjuster.html#adjustmentValueChanged-java.awt.event.AdjustmentEvent-">adjustmentValueChanged(AdjustmentEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/LineWidthAdjuster.html" title="class in ij.plugin.frame">LineWidthAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#adjustmentValueChanged-java.awt.event.AdjustmentEvent-">adjustmentValueChanged(AdjustmentEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#adjustmentValueChanged-java.awt.event.AdjustmentEvent-">adjustmentValueChanged(AdjustmentEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#adjustmentValueChanged-java.awt.event.AdjustmentEvent-">adjustmentValueChanged(AdjustmentEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#ALL_KEYS">ALL_KEYS</a></span> - Static variable in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#ALL_STATS">ALL_STATS</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd>
<div class="block">All measurement options</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#allowRecording-boolean-">allowRecording(boolean)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Wand.html#allPoints--">allPoints()</a></span> - Static method in class ij.gui.<a href="ij/gui/Wand.html" title="class in ij.gui">Wand</a></dt>
<dd>
<div class="block">Returns 'true' if output contains intermediate points for straight lines longer than one pixel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#altKeyDown--">altKeyDown()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if the alt key is down.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#alwaysOnTop">alwaysOnTop</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">"ImageJ" window is always on top.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/LineGraphAnalyzer.html#analyze-ij.ImagePlus-">analyze(ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/LineGraphAnalyzer.html" title="class in ij.plugin.filter">LineGraphAnalyzer</a></dt>
<dd>
<div class="block">Uses ImageJ's particle analyzer to extract a set
of coordinate pairs from a digitized line graph.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#analyze-ij.ImagePlus-">analyze(ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Performs particle analysis on the specified image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#analyze-ij.ImagePlus-ij.process.ImageProcessor-">analyze(ImagePlus, ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Performs particle analysis on the specified ImagePlus and
ImageProcessor.</div>
</dd>
<dt><a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter"><span class="typeNameLink">Analyzer</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This plugin implements ImageJ's Analyze/Measure and Analyze/Set Measurements commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#Analyzer--">Analyzer()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#Analyzer-ij.ImagePlus-">Analyzer(ImagePlus)</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Constructs a new Analyzer using the specified ImagePlus object
and the current measurement options and default results table.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#Analyzer-ij.ImagePlus-ij.measure.ResultsTable-">Analyzer(ImagePlus, ResultsTable)</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Construct a new Analyzer using an ImagePlus object and a ResultsTable.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#Analyzer-ij.ImagePlus-int-ij.measure.ResultsTable-">Analyzer(ImagePlus, int, ResultsTable)</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Construct a new Analyzer using an ImagePlus object and private
measurement options and a ResultsTable.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#analyzer">analyzer</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#and-ij.gui.ShapeRoi-">and(ShapeRoi)</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Unary intersection operator.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#AND">AND</a></span> - Static variable in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">dst=dst AND src</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#and-int-">and(int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#and-int-">and(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Binary AND of each pixel in the image or ROI with 'value'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#and-int-">and(int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#ANGLE">ANGLE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#ANGLE">ANGLE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#ANGLE">ANGLE</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/EllipseFitter.html#angle">angle</a></span> - Variable in class ij.process.<a href="ij/process/EllipseFitter.html" title="class in ij.process">EllipseFitter</a></dt>
<dd>
<div class="block">Angle in degrees</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#angle">angle</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Angle in degrees of fitted ellipse</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#angstromSymbol">angstromSymbol</a></span> - Static variable in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Animator.html" title="class in ij.plugin"><span class="typeNameLink">Animator</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin animates stacks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Animator.html#Animator--">Animator()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Animator.html" title="class in ij.plugin">Animator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#antialiasedText">antialiasedText</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">No longer used</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#antialiasedText">antialiasedText</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#antialiasedTools">antialiasedTools</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Draw tool icons using antialiasing (always true).</div>
</dd>
<dt><a href="ij/plugin/AppearanceOptions.html" title="class in ij.plugin"><span class="typeNameLink">AppearanceOptions</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Edit/Options/Appearance command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AppearanceOptions.html#AppearanceOptions--">AppearanceOptions()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/AppearanceOptions.html" title="class in ij.plugin">AppearanceOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#append-java.lang.String-java.lang.String-">append(String, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Appends a string to the end of a file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#append-java.lang.String-">append(String)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#append-java.lang.String-">append(String)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Adds one or more lines to the end of this TextPanel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#append-java.util.ArrayList-">append(ArrayList)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Adds strings contained in an ArrayList to the end of this TextPanel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#append-java.lang.String-">append(String)</a></span> - Method in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd>
<div class="block">Adds one or lines of text to the window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#appendLine-java.lang.String-">appendLine(String)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Adds a single line to the end of this TextPanel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#appendWithoutUpdate-java.lang.String-">appendWithoutUpdate(String)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Adds a single line to the end of this TextPanel without updating the display.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#applyLut--">applyLut()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ImageMath.html#applyMacro-ij.process.ImageProcessor-java.lang.String-boolean-">applyMacro(ImageProcessor, String, boolean)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/ImageMath.html" title="class in ij.plugin.filter">ImageMath</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#applyMacro-java.lang.String-">applyMacro(String)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Uses the Process/Math/Macro command to apply macro code to this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#applyTable-int:A-">applyTable(int[])</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#applyTable-int:A-">applyTable(int[])</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#applyTable-int:A-int-">applyTable(int[], int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#applyTable-int:A-">applyTable(int[])</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#applyTable-int:A-">applyTable(int[])</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Transforms the image or ROI using a lookup table.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#applyTable-int:A-">applyTable(int[])</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Transforms the pixel data using a 65536 entry lookup table.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#applyTable-int:A-">applyTable(int[])</a></span> - Method in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#AREA">AREA</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#AREA">AREA</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#area">area</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#AREA_FRACTION">AREA_FRACTION</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#AREA_FRACTION">AREA_FRACTION</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#areaFraction">areaFraction</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroExtension.html#ARG_ARRAY">ARG_ARRAY</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroExtension.html" title="interface in ij.macro">MacroExtension</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroExtension.html#ARG_NUMBER">ARG_NUMBER</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroExtension.html" title="interface in ij.macro">MacroExtension</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroExtension.html#ARG_OPTIONAL">ARG_OPTIONAL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroExtension.html" title="interface in ij.macro">MacroExtension</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroExtension.html#ARG_OUTPUT">ARG_OUTPUT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroExtension.html" title="interface in ij.macro">MacroExtension</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroExtension.html#ARG_STRING">ARG_STRING</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroExtension.html" title="interface in ij.macro">MacroExtension</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#ARGB">ARGB</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">32-bit interleaved ARGB.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#argTypes">argTypes</a></span> - Variable in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#ARRAY">ARRAY</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#ARRAY_FUNC">ARRAY_FUNC</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#ARRAY_FUNCTION">ARRAY_FUNCTION</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#arrayFunctionIDs">arrayFunctionIDs</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#arrayFunctions">arrayFunctions</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><a href="ij/util/ArrayUtil.html" title="class in ij.util"><span class="typeNameLink">ArrayUtil</span></a> - Class in <a href="ij/util/package-summary.html">ij.util</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/ArrayUtil.html#ArrayUtil-int-">ArrayUtil(int)</a></span> - Constructor for class ij.util.<a href="ij/util/ArrayUtil.html" title="class in ij.util">ArrayUtil</a></dt>
<dd>
<div class="block">constructeur</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/ArrayUtil.html#ArrayUtil-float:A-">ArrayUtil(float[])</a></span> - Constructor for class ij.util.<a href="ij/util/ArrayUtil.html" title="class in ij.util">ArrayUtil</a></dt>
<dd>
<div class="block">constructeur</div>
</dd>
<dt><a href="ij/gui/Arrow.html" title="class in ij.gui"><span class="typeNameLink">Arrow</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This is an Roi subclass for creating and displaying arrows.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#Arrow-double-double-double-double-">Arrow(double, double, double, double)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#Arrow-int-int-ij.ImagePlus-">Arrow(int, int, ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#ARROW">ARROW</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#ARROW_HEAD_SIZE">ARROW_HEAD_SIZE</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#ARROW_STYLE">ARROW_STYLE</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/tool/ArrowTool.html" title="class in ij.plugin.tool"><span class="typeNameLink">ArrowTool</span></a> - Class in <a href="ij/plugin/tool/package-summary.html">ij.plugin.tool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/ArrowTool.html#ArrowTool--">ArrowTool()</a></span> - Constructor for class ij.plugin.tool.<a href="ij/plugin/tool/ArrowTool.html" title="class in ij.plugin.tool">ArrowTool</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/ArrowToolOptions.html" title="class in ij.plugin"><span class="typeNameLink">ArrowToolOptions</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Edit/Options/Arrow Tool command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ArrowToolOptions.html#ArrowToolOptions--">ArrowToolOptions()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ArrowToolOptions.html" title="class in ij.plugin">ArrowToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#ARTEST">ARTEST</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#ASIN">ASIN</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#asp_bk">asp_bk</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#aspect">aspect</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#ASPECT_RATIO">ASPECT_RATIO</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#ATAN">ATAN</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#ATAN2">ATAN2</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#AUTO_FORMAT">AUTO_FORMAT</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#AUTO_POSITION">AUTO_POSITION</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Legend positions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#AUTO_UPDATE">AUTO_UPDATE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#autoClose">autoClose</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Automatically close window after saving values.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#autoContrast">autoContrast</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Adjust contrast when scrolling stacks (or hold shift key down)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Wand.html#autoOutline-int-int-double-double-int-">autoOutline(int, int, double, double, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Wand.html" title="class in ij.gui">Wand</a></dt>
<dd>
<div class="block">Traces an object defined by lower and upper threshold values.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Wand.html#autoOutline-int-int-double-double-">autoOutline(int, int, double, double)</a></span> - Method in class ij.gui.<a href="ij/gui/Wand.html" title="class in ij.gui">Wand</a></dt>
<dd>
<div class="block">Traces an object defined by lower and upper threshold values or an
interior hole; whatever is found first ('legacy mode').</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Wand.html#autoOutline-int-int-int-int-">autoOutline(int, int, int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Wand.html" title="class in ij.gui">Wand</a></dt>
<dd>
<div class="block">This is a variation of legacy autoOutline that uses int threshold arguments.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Wand.html#autoOutline-int-int-">autoOutline(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Wand.html" title="class in ij.gui">Wand</a></dt>
<dd>
<div class="block">Traces the boundary of an area of uniform color, where
'startX' and 'startY' are somewhere inside the area.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Wand.html#autoOutline-int-int-double-int-">autoOutline(int, int, double, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Wand.html" title="class in ij.gui">Wand</a></dt>
<dd>
<div class="block">Traces the boundary of the area with pixel values within
'tolerance' of the value of the pixel at the starting location.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#autoRunExamples">autoRunExamples</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Automatically run examples in Help/Examples menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#autoThreshold--">autoThreshold()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#autoThreshold--">autoThreshold()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Not implemented.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#autoThreshold--">autoThreshold()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Converts the image to binary using an automatically determined threshold.</div>
</dd>
<dt><a href="ij/process/AutoThresholder.html" title="class in ij.process"><span class="typeNameLink">AutoThresholder</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">Autothresholding methods (limited to 256 bin histograms) from the Auto_Threshold plugin
(http://fiji.sc/Auto_Threshold) by G.Landini at bham dot ac dot uk).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/AutoThresholder.html#AutoThresholder--">AutoThresholder()</a></span> - Constructor for class ij.process.<a href="ij/process/AutoThresholder.html" title="class in ij.process">AutoThresholder</a></dt>
<dd> </dd>
<dt><a href="ij/process/AutoThresholder.Method.html" title="enum in ij.process"><span class="typeNameLink">AutoThresholder.Method</span></a> - Enum in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#AVAILABLE_BYTE1">AVAILABLE_BYTE1</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Binner.html#AVERAGE">AVERAGE</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Binner.html" title="class in ij.plugin">Binner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#AVERAGE">AVERAGE</a></span> - Static variable in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">dst=(dst+src)/2</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#AVG_METHOD">AVG_METHOD</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#AVI">AVI</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/AVI_Reader.html" title="class in ij.plugin"><span class="typeNameLink">AVI_Reader</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">
ImageJ Plugin for reading an AVI file into an image stack
(one slice per video frame)
Restrictions and Notes:
- Only few formats supported:
- uncompressed 8 bit with palette (=LUT)
- uncompressed 8 & 16 bit grayscale
- uncompressed 24 & 32 bit RGB (alpha channel ignored)
- uncompressed 32 bit AYUV (alpha channel ignored)
- various YUV 4:2:2 and 4:2:0 compressed formats (i.e., formats with
full luminance resolution, but reduced chroma resolution
- png or jpeg-encoded individual frames.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AVI_Reader.html#AVI_Reader--">AVI_Reader()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/AVI_Reader.html" title="class in ij.plugin">AVI_Reader</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/AVI_Writer.html" title="class in ij.plugin.filter"><span class="typeNameLink">AVI_Writer</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This plugin implements the File/Save As/AVI command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/AVI_Writer.html#AVI_Writer--">AVI_Writer()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/AVI_Writer.html" title="class in ij.plugin.filter">AVI_Writer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#avoidResliceInterpolation">avoidResliceInterpolation</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Avoid interpolation when re-slicing</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotDialog.html#AXIS_OPTIONS">AXIS_OPTIONS</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotDialog.html" title="class in ij.gui">PlotDialog</a></dt>
<dd>
<div class="block">types of dialog</div>
</dd>
</dl>
<a name="I:B">
<!-- -->
</a>
<h2 class="title">B</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/IJEventListener.html#BACKGROUND_COLOR_CHANGED">BACKGROUND_COLOR_CHANGED</a></span> - Static variable in interface ij.<a href="ij/IJEventListener.html" title="interface in ij">IJEventListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#backgroundColor">backgroundColor</a></span> - Static variable in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Thresholder.html#backgrounds">backgrounds</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Thresholder.html" title="class in ij.plugin">Thresholder</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/BackgroundSubtracter.html" title="class in ij.plugin.filter"><span class="typeNameLink">BackgroundSubtracter</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">Implements ImageJ's Subtract Background command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/BackgroundSubtracter.html#BackgroundSubtracter--">BackgroundSubtracter()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/BackgroundSubtracter.html" title="class in ij.plugin.filter">BackgroundSubtracter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#BAR">BAR</a></span> - Static variable in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#BARE_OUTLINES">BARE_OUTLINES</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#BARG">BARG</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">32-bit interleaved BARG (MCID).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#baseCM">baseCM</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/BatchConverter.html" title="class in ij.plugin"><span class="typeNameLink">BatchConverter</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the File/ /Convert command,
which converts the images in a folder to a specified format.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BatchConverter.html#BatchConverter--">BatchConverter()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/BatchConverter.html" title="class in ij.plugin">BatchConverter</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/BatchMeasure.html" title="class in ij.plugin"><span class="typeNameLink">BatchMeasure</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the File/Batch/Measure command,
which measures all the images in a user-specified folder.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BatchMeasure.html#BatchMeasure--">BatchMeasure()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/BatchMeasure.html" title="class in ij.plugin">BatchMeasure</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#batchMode">batchMode</a></span> - Static variable in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/BatchProcessor.html" title="class in ij.plugin"><span class="typeNameLink">BatchProcessor</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the File/Batch/Macro and File/Batch/Virtual Stack commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BatchProcessor.html#BatchProcessor--">BatchProcessor()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/BatchProcessor.html" title="class in ij.plugin">BatchProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#BCOLOR">BCOLOR</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#beep--">beep()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Emits an audio beep.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#BEEP">BEEP</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/Benchmark.html" title="class in ij.plugin.filter"><span class="typeNameLink">Benchmark</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">Implements the Plugins/Utilities/Run Benchmark command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Benchmark.html#Benchmark--">Benchmark()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Benchmark.html" title="class in ij.plugin.filter">Benchmark</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#BGR">BGR</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">24-bit interleaved BGR.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#BICUBIC">BICUBIC</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Interpolation methods</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#BILINEAR">BILINEAR</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Interpolation methods</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#bin-int-">bin(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a copy of this image that has been reduced in size using binning.</div>
</dd>
<dt><a href="ij/plugin/filter/Binary.html" title="class in ij.plugin.filter"><span class="typeNameLink">Binary</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">Implements the Erode, Dilate, Open, Close, Outline, Skeletonize
and Fill Holes commands in the Process/Binary submenu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Binary.html#Binary--">Binary()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Binary.html" title="class in ij.plugin.filter">Binary</a></dt>
<dd> </dd>
<dt><a href="ij/process/BinaryInterpolator.html" title="class in ij.process"><span class="typeNameLink">BinaryInterpolator</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/BinaryInterpolator.html#BinaryInterpolator--">BinaryInterpolator()</a></span> - Constructor for class ij.process.<a href="ij/process/BinaryInterpolator.html" title="class in ij.process">BinaryInterpolator</a></dt>
<dd> </dd>
<dt><a href="ij/process/BinaryProcessor.html" title="class in ij.process"><span class="typeNameLink">BinaryProcessor</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This class processes binary images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/BinaryProcessor.html#BinaryProcessor-ij.process.ByteProcessor-">BinaryProcessor(ByteProcessor)</a></span> - Constructor for class ij.process.<a href="ij/process/BinaryProcessor.html" title="class in ij.process">BinaryProcessor</a></dt>
<dd>
<div class="block">Creates a BinaryProcessor from a ByteProcessor.</div>
</dd>
<dt><a href="ij/plugin/Binner.html" title="class in ij.plugin"><span class="typeNameLink">Binner</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Image/Transform/Bin command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Binner.html#Binner--">Binner()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Binner.html" title="class in ij.plugin">Binner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#binSize">binSize</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#BIT_DEPTH">BIT_DEPTH</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><a href="ij/io/BitBuffer.html" title="class in ij.io"><span class="typeNameLink">BitBuffer</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">A class for reading arbitrary numbers of bits from a byte array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/BitBuffer.html#BitBuffer-byte:A-">BitBuffer(byte[])</a></span> - Constructor for class ij.io.<a href="ij/io/BitBuffer.html" title="class in ij.io">BitBuffer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#BITMAP">BITMAP</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">1-bit black and white.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#BITS_PER_SAMPLE">BITS_PER_SAMPLE</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#BLACK">BLACK</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Value of pixels included in masks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#BLACK_AND_WHITE_LUT">BLACK_AND_WHITE_LUT</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#blackBackground">blackBackground</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Backgound is black in binary images</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#blackCanvas">blackCanvas</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Use black image border.</div>
</dd>
<dt><a href="ij/process/Blitter.html" title="interface in ij.process"><span class="typeNameLink">Blitter</span></a> - Interface in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">ImageJ bit blitting classes must implement this interface.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RGBStackSplitter.html#blue">blue</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/RGBStackSplitter.html" title="class in ij.plugin.filter">RGBStackSplitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#blues">blues</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/GaussianBlur.html#blur-ij.process.ImageProcessor-double-">blur(ImageProcessor, double)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/GaussianBlur.html" title="class in ij.plugin.filter">GaussianBlur</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span></div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/GaussianBlur3D.html#blur-ij.ImagePlus-double-double-double-">blur(ImagePlus, double, double, double)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/GaussianBlur3D.html" title="class in ij.plugin">GaussianBlur3D</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/GaussianBlur.html#blur1Direction-ij.process.FloatProcessor-double-double-boolean-int-">blur1Direction(FloatProcessor, double, double, boolean, int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/GaussianBlur.html" title="class in ij.plugin.filter">GaussianBlur</a></dt>
<dd>
<div class="block">Blur an image in one direction (x or y) by a Gaussian.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#BLUR_MORE">BLUR_MORE</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/GaussianBlur.html#blurFloat-ij.process.FloatProcessor-double-double-double-">blurFloat(FloatProcessor, double, double, double)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/GaussianBlur.html" title="class in ij.plugin.filter">GaussianBlur</a></dt>
<dd>
<div class="block">Gaussian Filtering of a FloatProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/GaussianBlur.html#blurGaussian-ij.process.ImageProcessor-double-">blurGaussian(ImageProcessor, double)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/GaussianBlur.html" title="class in ij.plugin.filter">GaussianBlur</a></dt>
<dd>
<div class="block">Gaussian Filtering of an ImageProcessor</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/GaussianBlur.html#blurGaussian-ij.process.ImageProcessor-double-double-double-">blurGaussian(ImageProcessor, double, double, double)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/GaussianBlur.html" title="class in ij.plugin.filter">GaussianBlur</a></dt>
<dd>
<div class="block">Gaussian Filtering of an ImageProcessor</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#blurGaussian-double-">blurGaussian(double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Blurs the image by convolving with a Gaussian function.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#bLUT1">bLUT1</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#bLUT2">bLUT2</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#BMP">BMP</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#BMP">BMP</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/BMP_Reader.html" title="class in ij.plugin"><span class="typeNameLink">BMP_Reader</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin reads BMP files.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BMP_Reader.html#BMP_Reader--">BMP_Reader()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/BMP_Reader.html" title="class in ij.plugin">BMP_Reader</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/BMP_Writer.html" title="class in ij.plugin"><span class="typeNameLink">BMP_Writer</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Implements the File/Save As/BMP command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BMP_Writer.html#BMP_Writer--">BMP_Writer()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/BMP_Writer.html" title="class in ij.plugin">BMP_Writer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#boldFont">boldFont</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#BOTTOM">BOTTOM</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#BOTTOM_LEFT">BOTTOM_LEFT</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Legend positions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#BOTTOM_MARGIN">BOTTOM_MARGIN</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">Not a fixed value any more, use getDrawingFrame() to get the drawing area</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#BOTTOM_RIGHT">BOTTOM_RIGHT</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Legend positions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#boundingRect-int-int-int-int-">boundingRect(int, int, int, int)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Compute bounding rectangle given current and old cursor
locations.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#BOX">BOX</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Display points using a square box-shaped mark.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#BOX">BOX</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Display points using an box-shaped mark.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#BREAK">BREAK</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#BRIGHT_OUTLIERS">BRIGHT_OUTLIERS</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/BrowserLauncher.html" title="class in ij.plugin"><span class="typeNameLink">BrowserLauncher</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the File/Import/URL command and the commands in the Help menu that
open web pages.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BrowserLauncher.html#BrowserLauncher--">BrowserLauncher()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/BrowserLauncher.html" title="class in ij.plugin">BrowserLauncher</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#BRUSH_ROI">BRUSH_ROI</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/tool/BrushTool.html" title="class in ij.plugin.tool"><span class="typeNameLink">BrushTool</span></a> - Class in <a href="ij/plugin/tool/package-summary.html">ij.plugin.tool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/BrushTool.html#BrushTool--">BrushTool()</a></span> - Constructor for class ij.plugin.tool.<a href="ij/plugin/tool/BrushTool.html" title="class in ij.plugin.tool">BrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#bSyncAll">bSyncAll</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Buttons for user control.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#BUILD">BUILD</a></span> - Static variable in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#buildControlDialog-int-int-">buildControlDialog(int, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd>
<div class="block">Builds dialog to query users for projection parameters.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#buildControlPanel--">buildControlPanel()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Builds panel containing control buttons.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#buildWindowList--">buildWindowList()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Builds list of open ImageWindows</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#bUnsyncAll">bUnsyncAll</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Buttons for user control.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/MessageDialog.html#button">button</a></span> - Variable in class ij.gui.<a href="ij/gui/MessageDialog.html" title="class in ij.gui">MessageDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/WaitForUserDialog.html#button">button</a></span> - Variable in class ij.gui.<a href="ij/gui/WaitForUserDialog.html" title="class in ij.gui">WaitForUserDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#BYTE">BYTE</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">Output type: new 8-bit image</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#BYTE_OVERWRITE">BYTE_OVERWRITE</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">Output type: overwrite current 8-bit image</div>
</dd>
<dt><a href="ij/process/ByteBlitter.html" title="class in ij.process"><span class="typeNameLink">ByteBlitter</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This class does bit blitting of byte images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteBlitter.html#ByteBlitter-ij.process.ByteProcessor-">ByteBlitter(ByteProcessor)</a></span> - Constructor for class ij.process.<a href="ij/process/ByteBlitter.html" title="class in ij.process">ByteBlitter</a></dt>
<dd>
<div class="block">Constructs a ByteBlitter from a ByteProcessor.</div>
</dd>
<dt><a href="ij/process/ByteProcessor.html" title="class in ij.process"><span class="typeNameLink">ByteProcessor</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This is an 8-bit image and methods that operate on that image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#ByteProcessor-java.awt.Image-">ByteProcessor(Image)</a></span> - Constructor for class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Creates a ByteProcessor from an AWT Image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#ByteProcessor-int-int-">ByteProcessor(int, int)</a></span> - Constructor for class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Creates a blank ByteProcessor of the specified dimensions.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#ByteProcessor-int-int-byte:A-">ByteProcessor(int, int, byte[])</a></span> - Constructor for class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Creates a ByteProcessor from a byte array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#ByteProcessor-int-int-byte:A-java.awt.image.ColorModel-">ByteProcessor(int, int, byte[], ColorModel)</a></span> - Constructor for class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Creates a ByteProcessor from a pixel array and IndexColorModel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#ByteProcessor-java.awt.image.BufferedImage-">ByteProcessor(BufferedImage)</a></span> - Constructor for class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Creates a ByteProcessor from a TYPE_BYTE_GRAY BufferedImage.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#ByteProcessor-ij.process.ImageProcessor-boolean-">ByteProcessor(ImageProcessor, boolean)</a></span> - Constructor for class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Creates a ByteProcessor from an ImageProcessor.</div>
</dd>
<dt><a href="ij/process/ByteStatistics.html" title="class in ij.process"><span class="typeNameLink">ByteStatistics</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">8-bit image statistics, including histogram.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteStatistics.html#ByteStatistics-ij.process.ImageProcessor-">ByteStatistics(ImageProcessor)</a></span> - Constructor for class ij.process.<a href="ij/process/ByteStatistics.html" title="class in ij.process">ByteStatistics</a></dt>
<dd>
<div class="block">Construct an ImageStatistics object from a ByteProcessor
using the standard measurement options (area, mean,
mode, min and max) and no calibration.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteStatistics.html#ByteStatistics-ij.process.ImageProcessor-int-ij.measure.Calibration-">ByteStatistics(ImageProcessor, int, Calibration)</a></span> - Constructor for class ij.process.<a href="ij/process/ByteStatistics.html" title="class in ij.process">ByteStatistics</a></dt>
<dd>
<div class="block">Constructs a ByteStatistics object from a ByteProcessor using
the specified measurement and calibration.</div>
</dd>
</dl>
<a name="I:C">
<!-- -->
</a>
<h2 class="title">C</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#c2hex-java.awt.Color-">c2hex(Color)</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd>
<div class="block">Converts a Color to an 7 byte hex string starting with '#'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#C_POSITION">C_POSITION</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#cachedMask">cachedMask</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#cal">cal</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#cal">cal</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ImageCalculator.html#calculate-java.lang.String-ij.ImagePlus-ij.ImagePlus-">calculate(String, ImagePlus, ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ImageCalculator.html" title="class in ij.plugin">ImageCalculator</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by run(String,ImagePlus,ImagePlus)</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#calculateDistance-int-int-int-int-">calculateDistance(int, int, int, int)</a></span> - Static method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#CALCULATOR">CALCULATOR</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#CALIBRATE">CALIBRATE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Calibrator.html#calibrate-ij.ImagePlus-">calibrate(ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Calibrator.html" title="class in ij.plugin.filter">Calibrator</a></dt>
<dd>
<div class="block">Calibrate an image with the function type defined previously.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#calibrated--">calibrated()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Returns true if this image is density calibrated.</div>
</dd>
<dt><a href="ij/measure/Calibration.html" title="class in ij.measure"><span class="typeNameLink">Calibration</span></a> - Class in <a href="ij/measure/package-summary.html">ij.measure</a></dt>
<dd>
<div class="block">Calibration objects contain an image's spatial and density calibration data.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#Calibration-ij.ImagePlus-">Calibration(ImagePlus)</a></span> - Constructor for class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Constructs a new Calibration object using the default values.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#Calibration--">Calibration()</a></span> - Constructor for class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Constructs a new Calibration object using the default values.</div>
</dd>
<dt><a href="ij/plugin/CalibrationBar.html" title="class in ij.plugin"><span class="typeNameLink">CalibrationBar</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Analyze/Tools/Calibration Bar command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CalibrationBar.html#CalibrationBar--">CalibrationBar()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/CalibrationBar.html" title="class in ij.plugin">CalibrationBar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#calibrationFunction">calibrationFunction</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/Calibrator.html" title="class in ij.plugin.filter"><span class="typeNameLink">Calibrator</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">Implements the Analyze/Calibrate command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Calibrator.html#Calibrator--">Calibrator()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Calibrator.html" title="class in ij.plugin.filter">Calibrator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#CALL">CALL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#CANCELED">CANCELED</a></span> - Static variable in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/SaveChangesDialog.html#cancelPressed--">cancelPressed()</a></span> - Method in class ij.gui.<a href="ij/gui/SaveChangesDialog.html" title="class in ij.gui">SaveChangesDialog</a></dt>
<dd>
<div class="block">Returns true if the user dismissed dialog by pressing "Cancel".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/YesNoCancelDialog.html#cancelPressed--">cancelPressed()</a></span> - Method in class ij.gui.<a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui">YesNoCancelDialog</a></dt>
<dd>
<div class="block">Returns true if the user dismissed dialog by pressing "Cancel".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#canEnlarge-int-int-">canEnlarge(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Returns the size to which the window can be enlarged, or null if it can't be enlarged.</div>
</dd>
<dt><a href="ij/plugin/CanvasResizer.html" title="class in ij.plugin"><span class="typeNameLink">CanvasResizer</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Image/Adjust/Canvas Size command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CanvasResizer.html#CanvasResizer--">CanvasResizer()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/CanvasResizer.html" title="class in ij.plugin">CanvasResizer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ScreenGrabber.html#captureImage--">captureImage()</a></span> - Method in class ij.plugin.<a href="ij/plugin/ScreenGrabber.html" title="class in ij.plugin">ScreenGrabber</a></dt>
<dd>
<div class="block">Captures the active image window and returns it as an ImagePlus.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ScreenGrabber.html#captureScreen--">captureScreen()</a></span> - Method in class ij.plugin.<a href="ij/plugin/ScreenGrabber.html" title="class in ij.plugin">ScreenGrabber</a></dt>
<dd>
<div class="block">Captures the entire screen and returns it as an ImagePlus.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#caSnapshot-boolean-">caSnapshot(boolean)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Used by the ContrastAdjuster</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#caSnapshot--">caSnapshot()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Used by the ContrastAdjuster</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#cChannel">cChannel</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Checkboxes for user control.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#cCoords">cCoords</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Checkboxes for user control.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#cCursor">cCursor</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Checkboxes for user control.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GUI.html#center-java.awt.Window-">center(Window)</a></span> - Static method in class ij.gui.<a href="ij/gui/GUI.html" title="class in ij.gui">GUI</a></dt>
<dd>
<div class="block">Positions the specified window in the center of the screen.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#CENTER">CENTER</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Text justification.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#center">center</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#CENTER">CENTER</a></span> - Static variable in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#CENTER_JUSTIFY">CENTER_JUSTIFY</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Center justify text.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#CENTER_OF_MASS">CENTER_OF_MASS</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#centerDialog-boolean-">centerDialog(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Display dialog centered on the primary screen.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#centerNextImage--">centerNextImage()</a></span> - Static method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd>
<div class="block">Causes the next image to be opened to be centered on the screen
and displayed without informational text above the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#CENTROID">CENTROID</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#cFrame">cFrame</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Checkboxes for user control.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#CHANGE_VALUES">CHANGE_VALUES</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#changeFont-java.awt.Font-">changeFont(Font)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Obsolete; replaced by setFont().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#changeFont-java.awt.Font-">changeFont(Font)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">use the corresponding method of the Plot class</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#changes">changes</a></span> - Variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">True if any changes have been made to this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#changes">changes</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#CHANNEL">CHANNEL</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/ChannelArranger.html" title="class in ij.plugin"><span class="typeNameLink">ChannelArranger</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Image/Colors/Arrange Channels command,
which allows the user to change the order of channels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ChannelArranger.html#ChannelArranger--">ChannelArranger()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ChannelArranger.html" title="class in ij.plugin">ChannelArranger</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#channelLuts">channelLuts</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/frame/Channels.html" title="class in ij.plugin.frame"><span class="typeNameLink">Channels</span></a> - Class in <a href="ij/plugin/frame/package-summary.html">ij.plugin.frame</a></dt>
<dd>
<div class="block">Displays the ImageJ Channels window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Channels.html#Channels--">Channels()</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/Channels.html" title="class in ij.plugin.frame">Channels</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/ChannelSplitter.html" title="class in ij.plugin"><span class="typeNameLink">ChannelSplitter</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Image/Color/Split Channels command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ChannelSplitter.html#ChannelSplitter--">ChannelSplitter()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ChannelSplitter.html" title="class in ij.plugin">ChannelSplitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#CHAPMAN">CHAPMAN</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#CHAR_CODE_AT">CHAR_CODE_AT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#CHECK_AVAILABLE_MEMORY">CHECK_AVAILABLE_MEMORY</a></span> - Static variable in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#checkArguments-java.lang.Object:A-">checkArguments(Object[])</a></span> - Method in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#checkbox">checkbox</a></span> - Variable in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#checkForDuplicateName">checkForDuplicateName</a></span> - Static variable in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#choice">choice</a></span> - Variable in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#chromaD50">chromaD50</a></span> - Variable in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">reference white in xyY coordinates</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#chromaD55">chromaD55</a></span> - Variable in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#chromaD65">chromaD65</a></span> - Variable in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#chromaD75">chromaD75</a></span> - Variable in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#chromaWhitePoint">chromaWhitePoint</a></span> - Variable in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#CIRCLE">CIRCLE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Display points using a circle (5 pixels in diameter if line thickness<=1, otherwise 7).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#CIRCLE">CIRCLE</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Display points using a circle 5 pixels in diameter.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#CIRCULARITY">CIRCULARITY</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#CIRCULARITY">CIRCULARITY</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/CircularRoiMaker.html" title="class in ij.plugin"><span class="typeNameLink">CircularRoiMaker</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This class implements the Process/FFT/Make Circular Selection command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CircularRoiMaker.html#CircularRoiMaker--">CircularRoiMaker()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/CircularRoiMaker.html" title="class in ij.plugin">CircularRoiMaker</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/ClassChecker.html" title="class in ij.plugin"><span class="typeNameLink">ClassChecker</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Checks for duplicate class and JAR files in the plugins folders and deletes older duplicates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ClassChecker.html#ClassChecker--">ClassChecker()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ClassChecker.html" title="class in ij.plugin">ClassChecker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#clear--">clear()</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Removes all the ROIs in this Overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#clear-ij.process.ImageProcessor-">clear(ImageProcessor)</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Filler.html#clear-ij.process.ImageProcessor-">clear(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Filler.html" title="class in ij.plugin.filter">Filler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#clear--">clear()</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Deletes all the lines.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#CLEAR_WORKSHEET">CLEAR_WORKSHEET</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Clear ImageJ console before starting.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Filler.html#clearOutside-ij.process.ImageProcessor-">clearOutside(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Filler.html" title="class in ij.plugin.filter">Filler</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by ImageProcessor.fillOutside(Roi)</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#clearSelection--">clearSelection()</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Deletes the selected lines.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#clipboard">clipboard</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Clipboard.html" title="class in ij.plugin"><span class="typeNameLink">Clipboard</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Copies/pastes images to/from the system clipboard.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Clipboard.html#Clipboard--">Clipboard()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Clipboard.html" title="class in ij.plugin">Clipboard</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#clipHeight">clipHeight</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#clipRectMargin--">clipRectMargin()</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#clipRectMargin--">clipRectMargin()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#clipRectMargin--">clipRectMargin()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#clipRectMargin--">clipRectMargin()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#clipWidth">clipWidth</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#clipX">clipX</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#clipXMax">clipXMax</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#clipXMin">clipXMin</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#clipY">clipY</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#clipYMax">clipYMax</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#clipYMin">clipYMin</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageRoi.html#clone--">clone()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageRoi.html" title="class in ij.gui">ImageRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#clone--">clone()</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Returns a copy of this PointRoi.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#clone--">clone()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Returns a copy of this PolygonRoi.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#clone--">clone()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns a copy of this roi.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#clone--">clone()</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Returns a deep copy of this.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#clone--">clone()</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Returns a copy of this TextRoi.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#clone--">clone()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns a shallow copy of this ImagePlus.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#clone--">clone()</a></span> - Method in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#clone--">clone()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#clone--">clone()</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Duplicates this ResultsTable.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#clone--">clone()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a shallow copy of this ImageProcessor, where this
image and the copy share pixel data.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/LUT.html#clone--">clone()</a></span> - Method in class ij.process.<a href="ij/process/LUT.html" title="class in ij.process">LUT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#close--">close()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#close--">close()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd>
<div class="block">Removes this window from the window list and disposes of it.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#close--">close()</a></span> - Method in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/WaitForUserDialog.html#close--">close()</a></span> - Method in class ij.gui.<a href="ij/gui/WaitForUserDialog.html" title="class in ij.gui">WaitForUserDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#close--">close()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Closes this image and sets the ImageProcessor to null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/LogStream.html#close--">close()</a></span> - Method in class ij.io.<a href="ij/io/LogStream.html" title="class in ij.io">LogStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RandomAccessStream.html#close--">close()</a></span> - Method in class ij.io.<a href="ij/io/RandomAccessStream.html" title="class in ij.io">RandomAccessStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#close--">close()</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#CLOSE">CLOSE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#CLOSE">CLOSE</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Channels.html#close--">close()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Channels.html" title="class in ij.plugin.frame">Channels</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ColorPicker.html#close--">close()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ColorPicker.html" title="class in ij.plugin.frame">ColorPicker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ColorThresholder.html#close--">close()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ColorThresholder.html" title="class in ij.plugin.frame">ColorThresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ContrastAdjuster.html#close--">close()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ContrastAdjuster.html" title="class in ij.plugin.frame">ContrastAdjuster</a></dt>
<dd>
<div class="block">Overrides close() in PlugInDialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#close--">close()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd>
<div class="block">Overrides close() in PlugInFrame.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/LineWidthAdjuster.html#close--">close()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/LineWidthAdjuster.html" title="class in ij.plugin.frame">LineWidthAdjuster</a></dt>
<dd>
<div class="block">Overrides close() in PlugInFrame.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/MemoryMonitor.html#close--">close()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/MemoryMonitor.html" title="class in ij.plugin.frame">MemoryMonitor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PasteController.html#close--">close()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PasteController.html" title="class in ij.plugin.frame">PasteController</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInDialog.html#close--">close()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInDialog.html" title="class in ij.plugin.frame">PlugInDialog</a></dt>
<dd>
<div class="block">Closes this window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInFrame.html#close--">close()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInFrame.html" title="class in ij.plugin.frame">PlugInFrame</a></dt>
<dd>
<div class="block">Closes this window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#close--">close()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#close--">close()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Overrides PlugInFrame.close().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#close--">close()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#close--">close()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd>
<div class="block">Overrides close() in PlugInFrame.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#close--">close()</a></span> - Method in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#close-boolean-">close(boolean)</a></span> - Method in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd>
<div class="block">Closes this TextWindow.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Commands.html#closeAll--">closeAll()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Commands.html" title="class in ij.plugin">Commands</a></dt>
<dd>
<div class="block">Closes all image windows, or returns 'false' if the user cancels the unsaved changes dialog box.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#closeAllWindows--">closeAllWindows()</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Closes all windows.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#closeAndRefocus--">closeAndRefocus()</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#closed">closed</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#CLOSED">CLOSED</a></span> - Static variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#cm">cm</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#cm2">cm2</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#CMYK">CMYK</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">32-bit interleaved CMYK.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#coefficients">coefficients</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#COLOR">COLOR</a></span> - Static variable in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd>
<div class="block">Display modes (note: TRANSPARENT mode has not yet been implemented)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#COLOR">COLOR</a></span> - Static variable in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Image display modes</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#COLOR8">COLOR8</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">8-bit unsigned integer with color lookup table.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#COLOR_256">COLOR_256</a></span> - Static variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">8-bit indexed color</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#COLOR_MAP">COLOR_MAP</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJEventListener.html#COLOR_PICKER_CLOSED">COLOR_PICKER_CLOSED</a></span> - Static variable in interface ij.<a href="ij/IJEventListener.html" title="interface in ij">IJEventListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#COLOR_RGB">COLOR_RGB</a></span> - Static variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">32-bit RGB color</div>
</dd>
<dt><a href="ij/process/ColorBlitter.html" title="class in ij.process"><span class="typeNameLink">ColorBlitter</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This class does bit blitting of RGB images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorBlitter.html#ColorBlitter-ij.process.ColorProcessor-">ColorBlitter(ColorProcessor)</a></span> - Constructor for class ij.process.<a href="ij/process/ColorBlitter.html" title="class in ij.process">ColorBlitter</a></dt>
<dd>
<div class="block">Constructs a ColorBlitter from a ColorProcessor.</div>
</dd>
<dt><a href="ij/gui/ColorChooser.html" title="class in ij.gui"><span class="typeNameLink">ColorChooser</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">Displays a dialog that allows the user to select a color using three sliders.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ColorChooser.html#ColorChooser-java.lang.String-java.awt.Color-boolean-">ColorChooser(String, Color, boolean)</a></span> - Constructor for class ij.gui.<a href="ij/gui/ColorChooser.html" title="class in ij.gui">ColorChooser</a></dt>
<dd>
<div class="block">Constructs a ColorChooser using the specified title and initial color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ColorChooser.html#ColorChooser-java.lang.String-java.awt.Color-boolean-java.awt.Frame-">ColorChooser(String, Color, boolean, Frame)</a></span> - Constructor for class ij.gui.<a href="ij/gui/ColorChooser.html" title="class in ij.gui">ColorChooser</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/frame/ColorPicker.html" title="class in ij.plugin.frame"><span class="typeNameLink">ColorPicker</span></a> - Class in <a href="ij/plugin/frame/package-summary.html">ij.plugin.frame</a></dt>
<dd>
<div class="block">Implements the Image/Color/Color Picker command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ColorPicker.html#ColorPicker--">ColorPicker()</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/ColorPicker.html" title="class in ij.plugin.frame">ColorPicker</a></dt>
<dd> </dd>
<dt><a href="ij/process/ColorProcessor.html" title="class in ij.process"><span class="typeNameLink">ColorProcessor</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This is an 32-bit RGB image and methods that operate on that image..</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#ColorProcessor-java.awt.Image-">ColorProcessor(Image)</a></span> - Constructor for class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Creates a ColorProcessor from an AWT Image or BufferedImage.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#ColorProcessor-int-int-">ColorProcessor(int, int)</a></span> - Constructor for class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Creates a blank ColorProcessor of the specified dimensions.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#ColorProcessor-int-int-int:A-">ColorProcessor(int, int, int[])</a></span> - Constructor for class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Creates a ColorProcessor from a pixel array.</div>
</dd>
<dt><a href="ij/plugin/Colors.html" title="class in ij.plugin"><span class="typeNameLink">Colors</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements most of the Edit/Options/Colors command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Colors.html#Colors--">Colors()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Colors.html" title="class in ij.plugin">Colors</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Colors.html#colors">colors</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Colors.html" title="class in ij.plugin">Colors</a></dt>
<dd> </dd>
<dt><a href="ij/process/ColorSpaceConverter.html" title="class in ij.process"><span class="typeNameLink">ColorSpaceConverter</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">ColorSpaceConverter</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#ColorSpaceConverter--">ColorSpaceConverter()</a></span> - Constructor for class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">Default constructor; uses D65 for the white point</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#ColorSpaceConverter-java.lang.String-">ColorSpaceConverter(String)</a></span> - Constructor for class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">Constructor for setting a non-default white point</div>
</dd>
<dt><a href="ij/process/ColorStatistics.html" title="class in ij.process"><span class="typeNameLink">ColorStatistics</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">RGB image statistics, including histogram.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorStatistics.html#ColorStatistics-ij.process.ImageProcessor-">ColorStatistics(ImageProcessor)</a></span> - Constructor for class ij.process.<a href="ij/process/ColorStatistics.html" title="class in ij.process">ColorStatistics</a></dt>
<dd>
<div class="block">Construct an ImageStatistics object from a ColorProcessor
using the standard measurement options (area, mean,
mode, min and max).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorStatistics.html#ColorStatistics-ij.process.ImageProcessor-int-ij.measure.Calibration-">ColorStatistics(ImageProcessor, int, Calibration)</a></span> - Constructor for class ij.process.<a href="ij/process/ColorStatistics.html" title="class in ij.process">ColorStatistics</a></dt>
<dd>
<div class="block">Constructs a ColorStatistics object from a ColorProcessor using
the specified measurement options.</div>
</dd>
<dt><a href="ij/plugin/frame/ColorThresholder.html" title="class in ij.plugin.frame"><span class="typeNameLink">ColorThresholder</span></a> - Class in <a href="ij/plugin/frame/package-summary.html">ij.plugin.frame</a></dt>
<dd>
<div class="block">Selects pixels according to hsb or rgb components.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ColorThresholder.html#ColorThresholder--">ColorThresholder()</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/ColorThresholder.html" title="class in ij.plugin.frame">ColorThresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Colors.html#colorToString-java.awt.Color-">colorToString(Color)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Colors.html" title="class in ij.plugin">Colors</a></dt>
<dd>
<div class="block">Converts a Color into a string ("red", "green", #aa55ff, etc.).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Colors.html#colorToString2-java.awt.Color-">colorToString2(Color)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Colors.html" title="class in ij.plugin">Colors</a></dt>
<dd>
<div class="block">Converts a Color into a string ("Red", "Green", #aa55ff, etc.).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#COLUMN_IN_USE">COLUMN_IN_USE</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#COLUMN_NOT_FOUND">COLUMN_NOT_FOUND</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#columnExists-int-">columnExists(int)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns true if the specified column exists and is not empty.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#columnExists-java.lang.String-">columnExists(String)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns 'true' if the specified column exists and is not emptly.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackCombiner.html#combineHorizontally-ij.ImageStack-ij.ImageStack-">combineHorizontally(ImageStack, ImageStack)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackCombiner.html" title="class in ij.plugin">StackCombiner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackCombiner.html#combineVertically-ij.ImageStack-ij.ImageStack-">combineVertically(ImageStack, ImageStack)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackCombiner.html" title="class in ij.plugin">StackCombiner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#COMMAND_IN_USE">COMMAND_IN_USE</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#COMMAND_NOT_FOUND">COMMAND_NOT_FOUND</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CommandListener.html#commandExecuting-java.lang.String-">commandExecuting(String)</a></span> - Method in interface ij.<a href="ij/CommandListener.html" title="interface in ij">CommandListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/EventListener.html#commandExecuting-java.lang.String-">commandExecuting(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/EventListener.html" title="class in ij.plugin">EventListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#commandExecuting-java.lang.String-">commandExecuting(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/CommandFinder.html" title="class in ij.plugin"><span class="typeNameLink">CommandFinder</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#CommandFinder--">CommandFinder()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#commandInUse-java.lang.String-">commandInUse(String)</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><a href="ij/CommandListener.html" title="interface in ij"><span class="typeNameLink">CommandListener</span></a> - Interface in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">Plugins that implement this interface are notified when ImageJ
is about to run a menu command.</div>
</dd>
<dt><a href="ij/plugin/CommandLister.html" title="class in ij.plugin"><span class="typeNameLink">CommandLister</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This class is used by the Plugins/Shortcuts/List Shortcuts
command to display a list keyboard shortcuts.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandLister.html#CommandLister--">CommandLister()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/CommandLister.html" title="class in ij.plugin">CommandLister</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#commandPrefix">commandPrefix</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Commands.html" title="class in ij.plugin"><span class="typeNameLink">Commands</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Runs miscellaneous File and Window menu commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Commands.html#Commands--">Commands()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Commands.html" title="class in ij.plugin">Commands</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Compiler.html" title="class in ij.plugin"><span class="typeNameLink">Compiler</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Compiles and runs plugins using the javac compiler.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Compiler.html#Compiler--">Compiler()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Compiler.html" title="class in ij.plugin">Compiler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/RoiListener.html#COMPLETED">COMPLETED</a></span> - Static variable in interface ij.gui.<a href="ij/gui/RoiListener.html" title="interface in ij.gui">RoiListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#COMPOSITE">COMPOSITE</a></span> - Static variable in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd>
<div class="block">Display modes (note: TRANSPARENT mode has not yet been implemented)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#COMPOSITE">COMPOSITE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#COMPOSITE">COMPOSITE</a></span> - Static variable in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Image display modes</div>
</dd>
<dt><a href="ij/plugin/CompositeConverter.html" title="class in ij.plugin"><span class="typeNameLink">CompositeConverter</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Image/Color/Make Composite command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CompositeConverter.html#CompositeConverter--">CompositeConverter()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/CompositeConverter.html" title="class in ij.plugin">CompositeConverter</a></dt>
<dd> </dd>
<dt><a href="ij/CompositeImage.html" title="class in ij"><span class="typeNameLink">CompositeImage</span></a> - Class in <a href="ij/package-summary.html">ij</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#CompositeImage-ij.ImagePlus-">CompositeImage(ImagePlus)</a></span> - Constructor for class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#CompositeImage-ij.ImagePlus-int-">CompositeImage(ImagePlus, int)</a></span> - Constructor for class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#compositeImage">compositeImage</a></span> - Variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Undo.html#COMPOUND_FILTER">COMPOUND_FILTER</a></span> - Static variable in class ij.<a href="ij/Undo.html" title="class in ij">Undo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Undo.html#COMPOUND_FILTER_DONE">COMPOUND_FILTER_DONE</a></span> - Static variable in class ij.<a href="ij/Undo.html" title="class in ij">Undo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#compression">compression</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#COMPRESSION">COMPRESSION</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#COMPRESSION_NONE">COMPRESSION_NONE</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#COMPRESSION_UNKNOWN">COMPRESSION_UNKNOWN</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Concatenator.html#concatenate-ij.ImagePlus:A-boolean-">concatenate(ImagePlus[], boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Concatenator.html" title="class in ij.plugin">Concatenator</a></dt>
<dd>
<div class="block">Concatenate two or more images or stacks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Concatenator.html#concatenate-ij.ImagePlus-ij.ImagePlus-boolean-">concatenate(ImagePlus, ImagePlus, boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Concatenator.html" title="class in ij.plugin">Concatenator</a></dt>
<dd>
<div class="block">Concatenate two images or stacks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Concatenator.html#concatenateHyperstacks-ij.ImagePlus:A-java.lang.String-boolean-">concatenateHyperstacks(ImagePlus[], String, boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Concatenator.html" title="class in ij.plugin">Concatenator</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Concatenator.html" title="class in ij.plugin"><span class="typeNameLink">Concatenator</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin, which concatenates two or more images or stacks,
implements the Image/Stacks/Tools/Concatenate command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Concatenator.html#Concatenator--">Concatenator()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Concatenator.html" title="class in ij.plugin">Concatenator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#conjugateMultiply-ij.process.FHT-">conjugateMultiply(FHT)</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Returns the image resulting from the point by point Hartley conjugate
multiplication of this image and the specified image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#CONNECTED_CIRCLES">CONNECTED_CIRCLES</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Draw black lines between the dots and a circle with the given color at each dot</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#constrain">constrain</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#CONSTRUCTING">CONSTRUCTING</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#contains-int-int-">contains(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#contains-int-int-">contains(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/OvalRoi.html#contains-int-int-">contains(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/OvalRoi.html" title="class in ij.gui">OvalRoi</a></dt>
<dd>
<div class="block">Tests if the specified point is inside the boundary of this OvalRoi.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#contains-ij.gui.Roi-">contains(Roi)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Returns 'true' if this Overlay contains the specified ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#contains-int-int-">contains(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Returns true if (x,y) is one of the points in this collection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#contains-int-int-">contains(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#contains-int-int-">contains(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#contains-int-int-">contains(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Checks whether the specified coordinates are inside a on this ROI's shape boundaries.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatPolygon.html#contains-float-float-">contains(float, float)</a></span> - Method in class ij.process.<a href="ij/process/FloatPolygon.html" title="class in ij.process">FloatPolygon</a></dt>
<dd>
<div class="block">Returns 'true' if the point (x,y) is inside this polygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#CONTINUE">CONTINUE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/frame/ContrastAdjuster.html" title="class in ij.plugin.frame"><span class="typeNameLink">ContrastAdjuster</span></a> - Class in <a href="ij/plugin/frame/package-summary.html">ij.plugin.frame</a></dt>
<dd>
<div class="block">This plugin implements the Brightness/Contrast, Window/level and
Color Balance commands, all in the Image/Adjust sub-menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ContrastAdjuster.html#ContrastAdjuster--">ContrastAdjuster()</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/ContrastAdjuster.html" title="class in ij.plugin.frame">ContrastAdjuster</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/ContrastEnhancer.html" title="class in ij.plugin"><span class="typeNameLink">ContrastEnhancer</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Implements ImageJ's Process/Enhance Contrast command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ContrastEnhancer.html#ContrastEnhancer--">ContrastEnhancer()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ContrastEnhancer.html" title="class in ij.plugin">ContrastEnhancer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#controlKeyDown--">controlKeyDown()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if the control key is down.</div>
</dd>
<dt><a href="ij/plugin/ControlPanel.html" title="class in ij.plugin"><span class="typeNameLink">ControlPanel</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">ControlPanel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ControlPanel.html#ControlPanel--">ControlPanel()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ControlPanel.html" title="class in ij.plugin">ControlPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#controlPanel--">controlPanel()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Build window list display and button controls.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Converter.html#convert-java.lang.String-">convert(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Converter.html" title="class in ij.plugin">Converter</a></dt>
<dd>
<div class="block">Converts the ImagePlus to the specified image type.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ThresholdToSelection.html#convert-ij.process.ImageProcessor-">convert(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ThresholdToSelection.html" title="class in ij.plugin.filter">ThresholdToSelection</a></dt>
<dd>
<div class="block">Returns a selection created from the thresholded pixels in the
specified image, or null if there are no thresholded pixels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/MedianCut.html#convert-int-">convert(int)</a></span> - Method in class ij.process.<a href="ij/process/MedianCut.html" title="class in ij.process">MedianCut</a></dt>
<dd>
<div class="block">Uses Heckbert's median-cut algorithm to divide the color space defined by
"hist" into "maxcubes" cubes.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#CONVERT_TO_FLOAT">CONVERT_TO_FLOAT</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag to have the ImageProcessor that is passed to the run() method
converted to a FloatProcessor.</div>
</dd>
<dt><a href="ij/plugin/Converter.html" title="class in ij.plugin"><span class="typeNameLink">Converter</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Implements the conversion commands in the Image/Type submenu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Converter.html#Converter--">Converter()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Converter.html" title="class in ij.plugin">Converter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#convertGrayJpegTo8Bits-ij.ImagePlus-">convertGrayJpegTo8Bits(ImagePlus)</a></span> - Static method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Converts the specified RGB image to 8-bits if the 3 channels are identical.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageConverter.html#convertHSBToRGB--">convertHSBToRGB()</a></span> - Method in class ij.process.<a href="ij/process/ImageConverter.html" title="class in ij.process">ImageConverter</a></dt>
<dd>
<div class="block">Converts a 3-slice (hue, saturation, brightness) 8-bit stack to RGB.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RGBStackConverter.html#convertHyperstack-ij.ImagePlus-ij.ImagePlus-">convertHyperstack(ImagePlus, ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RGBStackConverter.html" title="class in ij.plugin">RGBStackConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ImagesToStack.html#convertImagesToStack--">convertImagesToStack()</a></span> - Method in class ij.plugin.<a href="ij/plugin/ImagesToStack.html" title="class in ij.plugin">ImagesToStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackEditor.html#convertImagesToStack--">convertImagesToStack()</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackEditor.html" title="class in ij.plugin">StackEditor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#convertIndexToPosition-int-">convertIndexToPosition(int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Converts the stack index 'n' (one-based) into a hyperstack position (channel, slice, frame).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageConverter.html#convertLabToRGB--">convertLabToRGB()</a></span> - Method in class ij.process.<a href="ij/process/ImageConverter.html" title="class in ij.process">ImageConverter</a></dt>
<dd>
<div class="block">Converts a Lab stack to RGB.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#convertOutputType-ij.macro.Variable-java.lang.Object-">convertOutputType(Variable, Object)</a></span> - Static method in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageConverter.html#convertRGBStackToRGB--">convertRGBStackToRGB()</a></span> - Method in class ij.process.<a href="ij/process/ImageConverter.html" title="class in ij.process">ImageConverter</a></dt>
<dd>
<div class="block">Converts a 2 or 3 slice 8-bit stack to RGB.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageConverter.html#convertRGBtoIndexedColor-int-">convertRGBtoIndexedColor(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageConverter.html" title="class in ij.process">ImageConverter</a></dt>
<dd>
<div class="block">Converts an RGB image to 8-bits indexed color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#convertShortcutToCode-java.lang.String-">convertShortcutToCode(String)</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackEditor.html#convertStackToImages-ij.ImagePlus-">convertStackToImages(ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackEditor.html" title="class in ij.plugin">StackEditor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#convertToByte-boolean-">convertToByte(boolean)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns an 8-bit version of this image as a ByteProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/MedianCut.html#convertToByte-int-">convertToByte(int)</a></span> - Method in class ij.process.<a href="ij/process/MedianCut.html" title="class in ij.process">MedianCut</a></dt>
<dd>
<div class="block">This is a version of convert that returns a ByteProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/TypeConverter.html#convertToByte--">convertToByte()</a></span> - Method in class ij.process.<a href="ij/process/TypeConverter.html" title="class in ij.process">TypeConverter</a></dt>
<dd>
<div class="block">Converts processor to a ByteProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#convertToByteProcessor--">convertToByteProcessor()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns an 8-bit version of this image as a ByteProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#convertToByteProcessor-boolean-">convertToByteProcessor(boolean)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns an 8-bit version of this image as a ByteProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#convertToColorProcessor--">convertToColorProcessor()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns an RGB version of this image as a ColorProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#convertToFloat--">convertToFloat()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Creates a float version of this stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#convertToFloat--">convertToFloat()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a 32-bit float version of this image as a FloatProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/TypeConverter.html#convertToFloat-float:A-">convertToFloat(float[])</a></span> - Method in class ij.process.<a href="ij/process/TypeConverter.html" title="class in ij.process">TypeConverter</a></dt>
<dd>
<div class="block">Converts processor to a FloatProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#convertToFloatProcessor--">convertToFloatProcessor()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a 32-bit float version of this image as a FloatProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageConverter.html#convertToGray16--">convertToGray16()</a></span> - Method in class ij.process.<a href="ij/process/ImageConverter.html" title="class in ij.process">ImageConverter</a></dt>
<dd>
<div class="block">Converts this ImagePlus to 16-bit grayscale.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackConverter.html#convertToGray16--">convertToGray16()</a></span> - Method in class ij.process.<a href="ij/process/StackConverter.html" title="class in ij.process">StackConverter</a></dt>
<dd>
<div class="block">Converts this Stack to 16-bit grayscale.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageConverter.html#convertToGray32--">convertToGray32()</a></span> - Method in class ij.process.<a href="ij/process/ImageConverter.html" title="class in ij.process">ImageConverter</a></dt>
<dd>
<div class="block">Converts this ImagePlus to 32-bit grayscale.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackConverter.html#convertToGray32--">convertToGray32()</a></span> - Method in class ij.process.<a href="ij/process/StackConverter.html" title="class in ij.process">StackConverter</a></dt>
<dd>
<div class="block">Converts this Stack to 32-bit (float) grayscale.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageConverter.html#convertToGray8--">convertToGray8()</a></span> - Method in class ij.process.<a href="ij/process/ImageConverter.html" title="class in ij.process">ImageConverter</a></dt>
<dd>
<div class="block">Converts this ImagePlus to 8-bit grayscale.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackConverter.html#convertToGray8--">convertToGray8()</a></span> - Method in class ij.process.<a href="ij/process/StackConverter.html" title="class in ij.process">StackConverter</a></dt>
<dd>
<div class="block">Converts this Stack to 8-bit grayscale.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageConverter.html#convertToHSB--">convertToHSB()</a></span> - Method in class ij.process.<a href="ij/process/ImageConverter.html" title="class in ij.process">ImageConverter</a></dt>
<dd>
<div class="block">Converts an RGB image to a HSB (hue, saturation and brightness) stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackConverter.html#convertToHSBHyperstack--">convertToHSBHyperstack()</a></span> - Method in class ij.process.<a href="ij/process/StackConverter.html" title="class in ij.process">StackConverter</a></dt>
<dd>
<div class="block">Converts the stack (which must be RGB) to a 3 channel
(hue, saturation and brightness) hyperstack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackConverter.html#convertToIndexedColor-int-">convertToIndexedColor(int)</a></span> - Method in class ij.process.<a href="ij/process/StackConverter.html" title="class in ij.process">StackConverter</a></dt>
<dd>
<div class="block">Converts the stack to 8-bits indexed color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageConverter.html#convertToLab--">convertToLab()</a></span> - Method in class ij.process.<a href="ij/process/ImageConverter.html" title="class in ij.process">ImageConverter</a></dt>
<dd>
<div class="block">Converts an RGB image to a Lab stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackConverter.html#convertToLabHyperstack--">convertToLabHyperstack()</a></span> - Method in class ij.process.<a href="ij/process/StackConverter.html" title="class in ij.process">StackConverter</a></dt>
<dd>
<div class="block">Converts the stack (which must be RGB) to a 3 channel
Lab hyperstack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#convertToMicrons">convertToMicrons</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Convert tiff units to microns if pixel width is less than 0.0001 cm.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RGBStackConverter.html#convertToRGB-ij.ImagePlus-">convertToRGB(ImagePlus)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/RGBStackConverter.html" title="class in ij.plugin">RGBStackConverter</a></dt>
<dd>
<div class="block">Converts the specified multi-channel (composite) image to RGB.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageConverter.html#convertToRGB--">convertToRGB()</a></span> - Method in class ij.process.<a href="ij/process/ImageConverter.html" title="class in ij.process">ImageConverter</a></dt>
<dd>
<div class="block">Converts this ImagePlus to RGB.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#convertToRGB--">convertToRGB()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns an RGB version of this image as a ColorProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackConverter.html#convertToRGB--">convertToRGB()</a></span> - Method in class ij.process.<a href="ij/process/StackConverter.html" title="class in ij.process">StackConverter</a></dt>
<dd>
<div class="block">Converts the Stack to RGB.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/TypeConverter.html#convertToRGB--">convertToRGB()</a></span> - Method in class ij.process.<a href="ij/process/TypeConverter.html" title="class in ij.process">TypeConverter</a></dt>
<dd>
<div class="block">Converts processor to a ColorProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackConverter.html#convertToRGBHyperstack--">convertToRGBHyperstack()</a></span> - Method in class ij.process.<a href="ij/process/StackConverter.html" title="class in ij.process">StackConverter</a></dt>
<dd>
<div class="block">Converts the stack (which must be RGB) to a
3 channel (red, green and blue) hyperstack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageConverter.html#convertToRGBStack--">convertToRGBStack()</a></span> - Method in class ij.process.<a href="ij/process/ImageConverter.html" title="class in ij.process">ImageConverter</a></dt>
<dd>
<div class="block">Converts an RGB image to an RGB (red, green and blue) stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#convertToShort-boolean-">convertToShort(boolean)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a 16-bit version of this image as a ShortProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/TypeConverter.html#convertToShort--">convertToShort()</a></span> - Method in class ij.process.<a href="ij/process/TypeConverter.html" title="class in ij.process">TypeConverter</a></dt>
<dd>
<div class="block">Converts processor to a ShortProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#convertToShortProcessor--">convertToShortProcessor()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a 16-bit version of this image as a ShortProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#convertToShortProcessor-boolean-">convertToShortProcessor(boolean)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a 16-bit version of this image as a ShortProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#convertVariable-ij.macro.Interpreter-int-ij.macro.Variable-">convertVariable(Interpreter, int, Variable)</a></span> - Static method in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Convolver.html#convolve-ij.process.ImageProcessor-float:A-int-int-">convolve(ImageProcessor, float[], int, int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Convolver.html" title="class in ij.plugin.filter">Convolver</a></dt>
<dd>
<div class="block">Convolves <code>ip</code> with a kernel of width <code>kw</code> and
height <code>kh</code>.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#convolve-float:A-int-int-">convolve(float[], int, int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Performs a convolution operation using the specified kernel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#convolve-float:A-int-int-">convolve(float[], int, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Performs a convolution operation using the specified kernel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#convolve-float:A-int-int-">convolve(float[], int, int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Performs a convolution operation using the specified kernel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#CONVOLVE">CONVOLVE</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#convolve-float:A-int-int-">convolve(float[], int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Performs a convolution operation using the specified kernel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#convolve-float:A-int-int-">convolve(float[], int, int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Performs a convolution operation using the specified kernel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#convolve3x3-int:A-">convolve3x3(int[])</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#convolve3x3-int:A-">convolve3x3(int[])</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">3x3 convolution contributed by Glynne Casteel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#convolve3x3-int:A-">convolve3x3(int[])</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Does 3x3 convolution.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#convolve3x3-int:A-">convolve3x3(int[])</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Convolves the image or ROI with the specified
3x3 integer convolution kernel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#convolve3x3-int:A-">convolve3x3(int[])</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Does 3x3 convolution.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Convolver.html#convolveFloat-ij.process.ImageProcessor-float:A-int-int-">convolveFloat(ImageProcessor, float[], int, int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Convolver.html" title="class in ij.plugin.filter">Convolver</a></dt>
<dd>
<div class="block">Convolves the float image <code>ip</code> with a kernel of width
<code>kw</code> and height <code>kh</code>.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Convolver.html#convolveFloat1D-ij.process.FloatProcessor-float:A-int-int-">convolveFloat1D(FloatProcessor, float[], int, int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Convolver.html" title="class in ij.plugin.filter">Convolver</a></dt>
<dd>
<div class="block">Convolves the image <code>ip</code> with a kernel of width
<code>kw</code> and height <code>kh</code>.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Convolver.html#convolveFloat1D-ij.process.FloatProcessor-float:A-int-int-double-">convolveFloat1D(FloatProcessor, float[], int, int, double)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Convolver.html" title="class in ij.plugin.filter">Convolver</a></dt>
<dd>
<div class="block">Convolves the image <code>ip</code> with a kernel of width
<code>kw</code> and height <code>kh</code>.</div>
</dd>
<dt><a href="ij/plugin/filter/Convolver.html" title="class in ij.plugin.filter"><span class="typeNameLink">Convolver</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This plugin convolves images using user user defined kernels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Convolver.html#Convolver--">Convolver()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Convolver.html" title="class in ij.plugin.filter">Convolver</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#COORDINATES">COORDINATES</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Coordinates.html" title="class in ij.plugin"><span class="typeNameLink">Coordinates</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">The plugin implements the Image/Adjust/Coordinates command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Coordinates.html#Coordinates--">Coordinates()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Coordinates.html" title="class in ij.plugin">Coordinates</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#copy">copy</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#copy-boolean-">copy(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd>
<div class="block">Copies the current ROI to the clipboard.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#copy--">copy()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Copies the contents of the current selection, or the entire
image if there is no selection, to the internal clipboard.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#copy-boolean-">copy(boolean)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Copies the contents of the current selection to the internal clipboard.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#copy--">copy()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Returns a clone of this object.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#COPY">COPY</a></span> - Static variable in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">dst=src</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#COPY_AXIS_STYLE">COPY_AXIS_STYLE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Flag for copying from a template: copy axis style</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#COPY_CONTENTS_STYLE">COPY_CONTENTS_STYLE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Flag for copying from a template: copy contents style</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#COPY_INVERTED">COPY_INVERTED</a></span> - Static variable in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">dst=255-src (8-bits and RGB)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#COPY_LABELS">COPY_LABELS</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Flag for copying from a template: copy style & text of axis labels</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#COPY_LEGEND">COPY_LEGEND</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Flag for copying from a template: copy legend</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#COPY_SIZE">COPY_SIZE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Flag for copying from a template: copy plot size</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#COPY_TRANSPARENT">COPY_TRANSPARENT</a></span> - Static variable in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">Copies with white pixels transparent.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#COPY_ZERO_TRANSPARENT">COPY_ZERO_TRANSPARENT</a></span> - Static variable in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">Copies with zero pixels transparent.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#copyAttributes-ij.gui.Roi-">copyAttributes(Roi)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Copy the attributes (outline color, fill color, outline width)
of 'roi2' to the this selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#copyAttributes-ij.ImagePlus-">copyAttributes(ImagePlus)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Copies attributes (name, ID, calibration, path, plot) of the specified image to this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#copyBits-ij.process.ImageProcessor-int-int-int-">copyBits(ImageProcessor, int, int, int)</a></span> - Method in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">Copies the image in 'src' to (x,y) using the specified mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteBlitter.html#copyBits-ij.process.ImageProcessor-int-int-int-">copyBits(ImageProcessor, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ByteBlitter.html" title="class in ij.process">ByteBlitter</a></dt>
<dd>
<div class="block">Copies the byte image in 'ip' to (x,y) using the specified mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#copyBits-ij.process.ImageProcessor-int-int-int-">copyBits(ImageProcessor, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Copies the image contained in 'ip' to (xloc, yloc) using one of
the transfer modes defined in the Blitter interface.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorBlitter.html#copyBits-ij.process.ImageProcessor-int-int-int-">copyBits(ImageProcessor, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorBlitter.html" title="class in ij.process">ColorBlitter</a></dt>
<dd>
<div class="block">Copies the RGB image in 'ip' to (x,y) using the specified mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#copyBits-ij.process.ImageProcessor-int-int-int-">copyBits(ImageProcessor, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Copies the image contained in 'ip' to (xloc, yloc) using one of
the transfer modes defined in the Blitter interface.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatBlitter.html#copyBits-ij.process.ImageProcessor-int-int-int-">copyBits(ImageProcessor, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/FloatBlitter.html" title="class in ij.process">FloatBlitter</a></dt>
<dd>
<div class="block">Copies the float image in 'ip' to (x,y) using the specified mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#copyBits-ij.process.ImageProcessor-int-int-int-">copyBits(ImageProcessor, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Copies the image contained in 'ip' to (xloc, yloc) using one of
the transfer modes defined in the Blitter interface.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#copyBits-ij.process.ImageProcessor-int-int-int-">copyBits(ImageProcessor, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Copies the image contained in 'ip' to (xloc, yloc) using one of
the transfer modes defined in the Blitter interface.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortBlitter.html#copyBits-ij.process.ImageProcessor-int-int-int-">copyBits(ImageProcessor, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ShortBlitter.html" title="class in ij.process">ShortBlitter</a></dt>
<dd>
<div class="block">Copies the 16-bit image in 'ip' to (x,y) using the specified mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#copyBits-ij.process.ImageProcessor-int-int-int-">copyBits(ImageProcessor, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Copies the image contained in 'ip' to (xloc, yloc) using one of
the transfer modes defined in the Blitter interface.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#copyBits-ij.process.ImageProcessor-int-int-int-">copyBits(ImageProcessor, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#copyBits-ij.ImageStack-int-int-int-">copyBits(ImageStack, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#copyColumnHeaders">copyColumnHeaders</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Include column headers when copying tables to clipboard.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Functions.html#copyFile-java.io.File-java.io.File-">copyFile(File, File)</a></span> - Static method in class ij.macro.<a href="ij/macro/Functions.html" title="class in ij.macro">Functions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#copyLuts-ij.ImagePlus-">copyLuts(ImagePlus)</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd>
<div class="block">Copies the LUTs and display mode of 'imp' to this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#copyScale-ij.ImagePlus-">copyScale(ImagePlus)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Copies the calibration of the specified image to this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#copySelection--">copySelection()</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Copies the current selection to the system clipboard.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#copyToClipboard--">copyToClipboard()</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#CORNER_DIAMETER">CORNER_DIAMETER</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#COS">COS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#count">count</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#COUNT">COUNT</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd>
<div class="block">Do not create an image, just count maxima and add count to Results table</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#COUNTERS_OFFSET">COUNTERS_OFFSET</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#create--">create()</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Returns a new Overlay that has the same properties as this one.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#create-int-int-int-int-">create(int, int, int, int)</a></span> - Static method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Creates a new ImageStack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#create-java.lang.String-java.lang.String-">create(String, String)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#create8BitImage--">create8BitImage()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GUI.html#createBlankImage-int-int-">createBlankImage(int, int)</a></span> - Static method in class ij.gui.<a href="ij/gui/GUI.html" title="class in ij.gui">GUI</a></dt>
<dd>
<div class="block">Creates a white AWT Image image of the specified size.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#createByteImage-java.lang.String-int-int-int-int-">createByteImage(String, int, int, int, int)</a></span> - Static method in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileOpener.html#createColorModel-ij.io.FileInfo-">createColorModel(FileInfo)</a></span> - Method in class ij.io.<a href="ij/io/FileOpener.html" title="class in ij.io">FileOpener</a></dt>
<dd>
<div class="block">Returns an IndexColorModel for the image specified by this FileInfo.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RGBStackMerge.html#createComposite-int-int-int-ij.ImageStack:A-boolean-">createComposite(int, int, int, ImageStack[], boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RGBStackMerge.html" title="class in ij.plugin">RGBStackMerge</a></dt>
<dd>
<div class="block">Deprecated; replaced by mergeChannels().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/RoiListener.html#CREATED">CREATED</a></span> - Static variable in interface ij.gui.<a href="ij/gui/RoiListener.html" title="interface in ij.gui">RoiListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#createEmptyStack--">createEmptyStack()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns an empty image stack that has the same
width, height and color table as this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#createFloatImage-java.lang.String-int-int-int-int-">createFloatImage(String, int, int, int, int)</a></span> - Static method in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/LookUpTable.html#createGrayscaleColorModel-boolean-">createGrayscaleColorModel(boolean)</a></span> - Static method in class ij.<a href="ij/LookUpTable.html" title="class in ij">LookUpTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#createHyperStack-java.lang.String-int-int-int-int-int-int-">createHyperStack(String, int, int, int, int, int, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Creates a new hyperstack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#createHyperStack-java.lang.String-int-int-int-int-">createHyperStack(String, int, int, int, int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">This method has been replaced by IJ.createHyperStack().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#createImage-java.lang.String-int-int-int-int-int-">createImage(String, int, int, int, int, int)</a></span> - Static method in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#createImage-java.lang.String-int-int-int-int-">createImage(String, int, int, int, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Creates a new image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#createImage-java.lang.String-java.lang.String-int-int-int-">createImage(String, String, int, int, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Creates a new imagePlus.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#createImage-java.lang.String-java.lang.String-int-int-int-int-int-">createImage(String, String, int, int, int, int, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Creates a new hyperstack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/LutLoader.html#createImage-java.awt.image.IndexColorModel-">createImage(IndexColorModel)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/LutLoader.html" title="class in ij.plugin">LutLoader</a></dt>
<dd>
<div class="block">Creates a 256x32 image from an IndexColorModel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#createImage--">createImage()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#createImage--">createImage()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#createImage--">createImage()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Create an 8-bit AWT image by scaling pixels in the range min-max to 0-255.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#createImage--">createImage()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a copy of this image is the form of an AWT Image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#createImage--">createImage()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Create an 8-bit AWT image by scaling pixels in the range min-max to 0-255.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#createImagePlus--">createImagePlus()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns a new ImagePlus with this image's attributes
(e.g.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileOpener.html#createInputStream-ij.io.FileInfo-">createInputStream(FileInfo)</a></span> - Method in class ij.io.<a href="ij/io/FileOpener.html" title="class in ij.io">FileOpener</a></dt>
<dd>
<div class="block">Returns an InputStream for the image described by this FileInfo.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/LUT.html#createInvertedLut--">createInvertedLut()</a></span> - Method in class ij.process.<a href="ij/process/LUT.html" title="class in ij.process">LUT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#createLut--">createLut()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Creates a LookUpTable object that corresponds to this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#createLutFromColor-java.awt.Color-">createLutFromColor(Color)</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/LUT.html#createLutFromColor-java.awt.Color-">createLutFromColor(Color)</a></span> - Static method in class ij.process.<a href="ij/process/LUT.html" title="class in ij.process">LUT</a></dt>
<dd>
<div class="block">Creates a color LUT from a Color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#createMacro-java.lang.String-java.lang.String-">createMacro(String, String)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NewPlugin.html#createMacro-java.lang.String-">createMacro(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/NewPlugin.html" title="class in ij.plugin">NewPlugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#createNewRoi-int-int-">createNewRoi(int, int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Starts the process of creating a new selection, where sx and sy are the
starting screen coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/OverlayLabels.html#createOverlay--">createOverlay()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/OverlayLabels.html" title="class in ij.plugin">OverlayLabels</a></dt>
<dd>
<div class="block">Creates an empty Overlay that has the current label settings.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NewPlugin.html#createPlugin-java.lang.String-int-java.lang.String-">createPlugin(String, int, String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/NewPlugin.html" title="class in ij.plugin">NewPlugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#createProcessor-int-int-">createProcessor(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Returns a new, blank ByteProcessor with the specified width and height.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#createProcessor-int-int-">createProcessor(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns a new, blank ColorProcessor with the specified width and height.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#createProcessor-int-int-">createProcessor(int, int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Returns a new, blank FloatProcessor with the specified width and height.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#createProcessor-int-int-">createProcessor(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a new, blank processor with the specified width and height.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#createProcessor-int-int-">createProcessor(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Returns a new, blank ShortProcessor with the specified width and height.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#createRGBImage-java.lang.String-int-int-int-int-">createRGBImage(String, int, int, int, int)</a></span> - Static method in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#createShortImage-java.lang.String-int-int-int-int-">createShortImage(String, int, int, int, int)</a></span> - Static method in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd>
<div class="block">Creates an unsigned short image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#createSubtitle--">createSubtitle()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd>
<div class="block">Creates the subtitle.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#createSubtitle--">createSubtitle()</a></span> - Method in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#createTableFromImage-ij.process.ImageProcessor-">createTableFromImage(ImageProcessor)</a></span> - Static method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Creates a ResultsTable from an image or image selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/ThreadUtil.html#createThreadArray-int-">createThreadArray(int)</a></span> - Static method in class ij.util.<a href="ij/util/ThreadUtil.html" title="class in ij.util">ThreadUtil</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/ThreadUtil.html#createThreadArray--">createThreadArray()</a></span> - Static method in class ij.util.<a href="ij/util/ThreadUtil.html" title="class in ij.util">ThreadUtil</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#createUnsignedShortImage-java.lang.String-int-int-int-int-">createUnsignedShortImage(String, int, int, int, int)</a></span> - Static method in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">Short images are always unsigned.</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#createWindow--">createWindow()</a></span> - Method in class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd>
<div class="block">Displays this profile plot in a window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#crop-java.awt.Rectangle-">crop(Rectangle)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#crop-int-int-">crop(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Removes ROIs having positions outside of the
interval defined by firstSlice and lastSlice.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#crop-int-int-int-int-int-int-">crop(int, int, int, int, int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Removes ROIs having a C, Z or T coordinate outside the volume
defined by firstC, lastC, firstZ, lastZ, firstT and lastT.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#crop--">crop()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns a copy this image or stack slice, cropped if there is an ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#crop-int-int-int-int-int-int-">crop(int, int, int, int, int, int)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Creates a new stack by cropping this one.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Duplicator.html#crop-ij.ImagePlus-">crop(ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Duplicator.html" title="class in ij.plugin">Duplicator</a></dt>
<dd>
<div class="block">Returns a copy the current stack image, cropped if there is a selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#crop--">crop()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#crop--">crop()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#crop--">crop()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#crop--">crop()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a new processor containing an image
that corresponds to the current ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#crop--">crop()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#crop-int-int-int-int-">crop(int, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd>
<div class="block">Crops the stack to the specified rectangle.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Duplicator.html#cropOverlay-ij.gui.Overlay-java.awt.Rectangle-">cropOverlay(Overlay, Rectangle)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Duplicator.html" title="class in ij.plugin">Duplicator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#CROSS">CROSS</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Display points using an cross-shaped mark.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#CROSS">CROSS</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Display points using an cross-shaped mark.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#CROSSHAIR">CROSSHAIR</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#crosshairCursor">crosshairCursor</a></span> - Static variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#cScaling">cScaling</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Checkboxes for user control.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#cSelector">cSelector</a></span> - Variable in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#cSlice">cSlice</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Checkboxes for user control.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#cTable">cTable</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackConverter.html#CTZ">CTZ</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/HyperStackConverter.html" title="class in ij.plugin">HyperStackConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#cubic-double-">cubic(double)</a></span> - Static method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#currentMemory--">currentMemory()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns the amount of memory currently being used by ImageJ.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#currentSlice">currentSlice</a></span> - Variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#cursorOverImage--">cursorOverImage()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Returns 'true' if the cursor is over this image.</div>
</dd>
<dt><a href="ij/measure/CurveFitter.html" title="class in ij.measure"><span class="typeNameLink">CurveFitter</span></a> - Class in <a href="ij/measure/package-summary.html">ij.measure</a></dt>
<dd>
<div class="block">Curve fitting class based on the Simplex method in the Minimizer class
Notes on fitting polynomial functions:
(i) The range of x values should not be too far from 0, especially for higher-order polynomials.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#CurveFitter-double:A-double:A-">CurveFitter(double[], double[])</a></span> - Constructor for class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Construct a new CurveFitter.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#CUSTOM">CUSTOM</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#CUSTOM">CUSTOM</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#CUSTOM1">CUSTOM1</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#CUSTOM2">CUSTOM2</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#CUSTOM3">CUSTOM3</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#CUSTOM4">CUSTOM4</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#CUSTOM5">CUSTOM5</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#CUSTOM6">CUSTOM6</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#CUSTOM7">CUSTOM7</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#cx">cx</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#cy">cy</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackConverter.html#CZT">CZT</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/HyperStackConverter.html" title="class in ij.plugin">HyperStackConverter</a></dt>
<dd> </dd>
</dl>
<a name="I:D">
<!-- -->
</a>
<h2 class="title">D</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/IJ.html#d2s-double-">d2s(double)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Converts a number to a formatted string using
2 digits to the right of the decimal point.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#d2s-double-int-">d2s(double, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Converts a number to a rounded formatted string.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#d2s-double-int-int-">d2s(double, int, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Converts a number to a rounded formatted string.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#D2S">D2S</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#d2s-double-int-">d2s(double, int)</a></span> - Static method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">This is a version of IJ.d2s() that uses scientific notation for
small numbes that would otherwise display as zero.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#D50">D50</a></span> - Variable in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">reference white in XYZ coordinates</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#D55">D55</a></span> - Variable in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#D65">D65</a></span> - Variable in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#D75">D75</a></span> - Variable in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#DARK_BACKGROUND">DARK_BACKGROUND</a></span> - Static variable in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#DARK_OUTLIERS">DARK_OUTLIERS</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#darkBlue">darkBlue</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#DATE_TIME">DATE_TIME</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#DEBUG">DEBUG</a></span> - Static variable in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Run ImageJ in debug mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Debugger.html#debug-ij.macro.Interpreter-int-">debug(Interpreter, int)</a></span> - Method in interface ij.macro.<a href="ij/macro/Debugger.html" title="interface in ij.macro">Debugger</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#DEBUG">DEBUG</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#debug-ij.macro.Interpreter-int-">debug(Interpreter, int)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#DEBUG_LOC_KEY">DEBUG_LOC_KEY</a></span> - Static variable in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd> </dd>
<dt><a href="ij/macro/Debugger.html" title="interface in ij.macro"><span class="typeNameLink">Debugger</span></a> - Interface in <a href="ij/macro/package-summary.html">ij.macro</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#debugInfo">debugInfo</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#debugMode">debugMode</a></span> - Static variable in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Use setDebugMode(boolean) to enable/disable debug mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#debugMode">debugMode</a></span> - Variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#decimalPlaces">decimalPlaces</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Colors.html#decode-java.lang.String-java.awt.Color-">decode(String, Color)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Colors.html" title="class in ij.plugin">Colors</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileOpener.html#decodeDescriptionString-ij.io.FileInfo-">decodeDescriptionString(FileInfo)</a></span> - Method in class ij.io.<a href="ij/io/FileOpener.html" title="class in ij.io">FileOpener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Program.html#decodeToken-int-">decodeToken(int)</a></span> - Method in class ij.macro.<a href="ij/macro/Program.html" title="class in ij.macro">Program</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#DEFAULT_FLAGS">DEFAULT_FLAGS</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">The default axisFlags, will be modified by PlotWindow.noGridLines and PlotWindow.noTicks (see getDefaultFlags)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#DEFAULT_JPEG_QUALITY">DEFAULT_JPEG_QUALITY</a></span> - Static variable in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#DEFAULT_PORT">DEFAULT_PORT</a></span> - Static variable in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Address of socket where Image accepts commands</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/JpegWriter.html#DEFAULT_QUALITY">DEFAULT_QUALITY</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/JpegWriter.html" title="class in ij.plugin">JpegWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#DEFAULT_VALUE_UNIT">DEFAULT_VALUE_UNIT</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#defaultChoiceIndexes">defaultChoiceIndexes</a></span> - Variable in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#defaultColorModel">defaultColorModel</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#defaultCursor">defaultCursor</a></span> - Static variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#defaultDirectory">defaultDirectory</a></span> - Static variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#defaultFillColor">defaultFillColor</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#defaultResultsExtension--">defaultResultsExtension()</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#defaultStrings">defaultStrings</a></span> - Variable in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#defaultText">defaultText</a></span> - Variable in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#defaultValues">defaultValues</a></span> - Variable in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#degreeSymbol">degreeSymbol</a></span> - Static variable in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/RoiListener.html#DELETED">DELETED</a></span> - Static variable in interface ij.gui.<a href="ij/gui/RoiListener.html" title="interface in ij.gui">RoiListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#deleteHandle-double-double-">deleteHandle(double, double)</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#deleteLastSlice--">deleteLastSlice()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Deletes the last slice in the stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#deleteLastSlice--">deleteLastSlice()</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Deletes the last slice in the stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#deletePoint-int-">deletePoint(int)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#deletePoint-int-">deletePoint(int)</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#deleteRoi--">deleteRoi()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Deletes the current region of interest.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#deleteRow-int-">deleteRow(int)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Deletes the specified row.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#deleteRows-int-int-">deleteRows(int, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Deletes 'row1' through 'row2' of the "Results" window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#deleteSlice-int-">deleteSlice(int)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Deletes the specified slice, were 1<=n<=nslices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AVI_Reader.html#deleteSlice-int-">deleteSlice(int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/AVI_Reader.html" title="class in ij.plugin">AVI_Reader</a></dt>
<dd>
<div class="block">Deletes the specified image from this virtual stack (if it is one),
where 1<=n<=nslices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FileInfoVirtualStack.html#deleteSlice-int-">deleteSlice(int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/FileInfoVirtualStack.html" title="class in ij.plugin">FileInfoVirtualStack</a></dt>
<dd>
<div class="block">Deletes the specified image, were 1<=n<=nImages.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ListVirtualStack.html#deleteSlice-int-">deleteSlice(int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ListVirtualStack.html" title="class in ij.plugin">ListVirtualStack</a></dt>
<dd>
<div class="block">Deletes the specified image, were 1<=n<=nslices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#deleteSlice-int-">deleteSlice(int)</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Deletes the specified slice, were 1<=n<=nslices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#descaleX-int-">descaleX(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Converts pixels to calibrated coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#descaleY-int-">descaleY(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Converts pixels to calibrated coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#description">description</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#deselect--">deselect()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#deselect-ij.gui.Roi-">deselect(Roi)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Deselect the specified ROI if it is the only one selected.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#deserialize-byte:A-">deserialize(byte[])</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Deserialize a byte array that was serialized using the FileSaver.serialize().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#DESPECKLE">DESPECKLE</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJApplet.html#destroy--">destroy()</a></span> - Method in class ij.<a href="ij/ImageJApplet.html" title="class in ij">ImageJApplet</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#dfht3-float:A-int-boolean-int-">dfht3(float[], int, boolean, int)</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Performs an optimized 1D FHT of an array or part of an array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#DIALOG">DIALOG</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/DialogListener.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in interface ij.gui.<a href="ij/gui/DialogListener.html" title="interface in ij.gui">DialogListener</a></dt>
<dd>
<div class="block">This method is invoked by a Generic Dialog if any of the inputs have changed
(CANCEL does not trigger it; OK and running the dialog from a macro only
trigger the first DialogListener added to a GenericDialog).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotContentsStyleDialog.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotContentsStyleDialog.html" title="class in ij.gui">PlotContentsStyleDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AppearanceOptions.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/AppearanceOptions.html" title="class in ij.plugin">AppearanceOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ArrowToolOptions.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ArrowToolOptions.html" title="class in ij.plugin">ArrowToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CircularRoiMaker.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CircularRoiMaker.html" title="class in ij.plugin">CircularRoiMaker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Coordinates.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Coordinates.html" title="class in ij.plugin">Coordinates</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/BackgroundSubtracter.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/BackgroundSubtracter.html" title="class in ij.plugin.filter">BackgroundSubtracter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Binary.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Binary.html" title="class in ij.plugin.filter">Binary</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Convolver.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Convolver.html" title="class in ij.plugin.filter">Convolver</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/GaussianBlur.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/GaussianBlur.html" title="class in ij.plugin.filter">GaussianBlur</a></dt>
<dd>
<div class="block">Listener to modifications of the input fields of the dialog</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ImageMath.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ImageMath.html" title="class in ij.plugin.filter">ImageMath</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd>
<div class="block">Read the parameters (during preview or after showing the dialog)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilterRunner.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilterRunner.html" title="class in ij.plugin.filter">PlugInFilterRunner</a></dt>
<dd>
<div class="block">The listener to any change in the dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Rotator.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Rotator.html" title="class in ij.plugin.filter">Rotator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/StackLabeler.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/StackLabeler.html" title="class in ij.plugin.filter">StackLabeler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Translator.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Translator.html" title="class in ij.plugin.filter">Translator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/UnsharpMask.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/UnsharpMask.html" title="class in ij.plugin.filter">UnsharpMask</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Grid.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Grid.html" title="class in ij.plugin">Grid</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackReducer.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/HyperStackReducer.html" title="class in ij.plugin">HyperStackReducer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/OverlayLabels.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/OverlayLabels.html" title="class in ij.plugin">OverlayLabels</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PointToolOptions.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/PointToolOptions.html" title="class in ij.plugin">PointToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RectToolOptions.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RectToolOptions.html" title="class in ij.plugin">RectToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RGBStackConverter.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RGBStackConverter.html" title="class in ij.plugin">RGBStackConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/SpecifyROI.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/SpecifyROI.html" title="class in ij.plugin">SpecifyROI</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Text.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Text.html" title="class in ij.plugin">Text</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/WandToolOptions.html#dialogItemChanged-ij.gui.GenericDialog-java.awt.AWTEvent-">dialogItemChanged(GenericDialog, AWTEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/WandToolOptions.html" title="class in ij.plugin">WandToolOptions</a></dt>
<dd> </dd>
<dt><a href="ij/gui/DialogListener.html" title="interface in ij.gui"><span class="typeNameLink">DialogListener</span></a> - Interface in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">PlugIns or PlugInFilters that want to listen to changes in a GenericDialog
without adding listeners for each dialog field should implementthis method.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#DICOM">DICOM</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#DICOM">DICOM</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/DICOM.html" title="class in ij.plugin"><span class="typeNameLink">DICOM</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin decodes DICOM files.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/DICOM.html#DICOM--">DICOM()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/DICOM.html" title="class in ij.plugin">DICOM</a></dt>
<dd>
<div class="block">Default constructor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/DICOM.html#DICOM-java.io.InputStream-">DICOM(InputStream)</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/DICOM.html" title="class in ij.plugin">DICOM</a></dt>
<dd>
<div class="block">Constructs a DICOM reader that using an InputStream.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/DICOM.html#DICOM-java.io.BufferedInputStream-">DICOM(BufferedInputStream)</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/DICOM.html" title="class in ij.plugin">DICOM</a></dt>
<dd>
<div class="block">Constructs a DICOM reader that using an BufferredInputStream.</div>
</dd>
<dt><a href="ij/util/DicomTools.html" title="class in ij.util"><span class="typeNameLink">DicomTools</span></a> - Class in <a href="ij/util/package-summary.html">ij.util</a></dt>
<dd>
<div class="block">DICOM utilities</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/DicomTools.html#DicomTools--">DicomTools()</a></span> - Constructor for class ij.util.<a href="ij/util/DicomTools.html" title="class in ij.util">DicomTools</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#DIFFERENCE">DIFFERENCE</a></span> - Static variable in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">dst=abs(dst-src)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#digits">digits</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#dilate--">dilate()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#dilate-int-int-">dilate(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#dilate--">dilate()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#dilate--">dilate()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Not implemented.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#dilate--">dilate()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Dilates the image or ROI using a 3x3 minimum filter.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#dilate--">dilate()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Not implemented.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#dimensionsSet">dimensionsSet</a></span> - Variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#DIR_IMAGE">DIR_IMAGE</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#directory">directory</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><a href="ij/io/DirectoryChooser.html" title="class in ij.io"><span class="typeNameLink">DirectoryChooser</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">This class displays a dialog box that allows the user can select a directory.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/DirectoryChooser.html#DirectoryChooser-java.lang.String-">DirectoryChooser(String)</a></span> - Constructor for class ij.io.<a href="ij/io/DirectoryChooser.html" title="class in ij.io">DirectoryChooser</a></dt>
<dd>
<div class="block">Display a dialog using the specified title.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#disableDensityCalibration--">disableDensityCalibration()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#disablePathRecording--">disablePathRecording()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd>
<div class="block">Temporarily disables path recording.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#disablePopupMenu-boolean-">disablePopupMenu(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Disable/enable popup menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#disableReset-boolean-">disableReset(boolean)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Used by RoiManager.multiMeasure() to suppress save as dialogs.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#disableRowLabels--">disableRowLabels()</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Set the row label column to null if the column label is "Label".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#disableUndo">disableUndo</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Disable Edit/Undo command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#dispatch-ij.macro.Functions-">dispatch(Functions)</a></span> - Method in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#display-java.lang.String-java.lang.String-">display(String, String)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#DISPLAY_SUMMARY">DISPLAY_SUMMARY</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Display a summary.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#displayChanged-ij.plugin.frame.DisplayChangeEvent-">displayChanged(DisplayChangeEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Method to pass on changes of the z-slice of a stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FFT.html#displayComplex">displayComplex</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/FFT.html" title="class in ij.plugin">FFT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#displayCounts--">displayCounts()</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AVI_Reader.html#displayDialog-boolean-">displayDialog(boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/AVI_Reader.html" title="class in ij.plugin">AVI_Reader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FFT.html#displayFHT">displayFHT</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/FFT.html" title="class in ij.plugin">FFT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#displayRanges">displayRanges</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FFT.html#displayRawPS">displayRawPS</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/FFT.html" title="class in ij.plugin">FFT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#displayResults--">displayResults()</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Writes the last row in the system results table to the Results window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#displaySummary">displaySummary</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#dispose--">dispose()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HTMLDialog.html#dispose--">dispose()</a></span> - Method in class ij.gui.<a href="ij/gui/HTMLDialog.html" title="class in ij.gui">HTMLDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/NonBlockingGenericDialog.html#dispose--">dispose()</a></span> - Method in class ij.gui.<a href="ij/gui/NonBlockingGenericDialog.html" title="class in ij.gui">NonBlockingGenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#dispose--">dispose()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Releases the ImageProcessor and ImagePlus associated with the plot.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#dispose--">dispose()</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Releases the resources used by this PlotWindow</div>
</dd>
<dt><a href="ij/plugin/Distribution.html" title="class in ij.plugin"><span class="typeNameLink">Distribution</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Analyze/Distribution command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Distribution.html#Distribution--">Distribution()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Distribution.html" title="class in ij.plugin">Distribution</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#DIV_BY_ZERO_VALUE">DIV_BY_ZERO_VALUE</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#DIV_EQUAL">DIV_EQUAL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#DIVIDE">DIVIDE</a></span> - Static variable in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">dst=dst/src</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#divide-ij.process.FHT-">divide(FHT)</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Returns the image resulting from the point by point Hartley division
of this image by the specified image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatBlitter.html#divideByZeroValue">divideByZeroValue</a></span> - Static variable in class ij.process.<a href="ij/process/FloatBlitter.html" title="class in ij.process">FloatBlitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#dmode">dmode</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Double mode</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#DO">DO</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#DO_COMMAND">DO_COMMAND</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#DO_WAND">DO_WAND</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#doCommand-java.lang.String-">doCommand(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Runs a menu command on a separete thread and returns immediately.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#doCommand-ij.ImagePlus-java.lang.String-">doCommand(ImagePlus, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Runs a menu command on a separete thread, using the specified image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#doCustomFit-java.lang.String-double:A-boolean-">doCustomFit(String, double[], boolean)</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Fit a function defined as a macro String like "y = a + b*x + c*x*x".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#doCustomFit-ij.measure.UserFunction-int-java.lang.String-double:A-double:A-boolean-">doCustomFit(UserFunction, int, String, double[], double[], boolean)</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Fit a function defined in a user plugin implementing the UserFunction interface
Use getStatus() and/or getStatusString() to see whether fitting was (probably) successful and
getParams() to access the result.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#DOES_16">DOES_16</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the filter handles 16-bit images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#DOES_32">DOES_32</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the filter handles float images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#DOES_8C">DOES_8C</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the filter handles 8-bit indexed color images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#DOES_8G">DOES_8G</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the filter handles 8-bit grayscale images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#DOES_ALL">DOES_ALL</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the filter handles all types of images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#DOES_RGB">DOES_RGB</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the filter handles RGB images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#DOES_STACKS">DOES_STACKS</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the filter wants its run() method to be
called for all the slices in a stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#doFit-int-">doFit(int)</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Perform curve fitting with one of the built-in functions
doFit(fitType) does the fit quietly
Use getStatus() and/or getStatusString() to see whether fitting was (probably) successful and
getParams() to access the result.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#doFit-int-boolean-">doFit(int, boolean)</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Perform curve fitting with one of the built-in functions
doFit(fitType, true) pops up a dialog allowing the user to set the initial
fit parameters and various numbers controlling the Minimizer
Use getStatus() and/or getStatusString() to see whether fitting was (probably) successful and
getParams() to access the result.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Fitter.html#doFit-int-">doFit(int)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Fitter.html" title="class in ij.plugin.frame">Fitter</a></dt>
<dd>
<div class="block">Fit data in the textArea, show result in log and create plot.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#doHyperStackProjection-boolean-">doHyperStackProjection(boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FFTMath.html#doMath-ij.ImagePlus-ij.ImagePlus-">doMath(ImagePlus, ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/FFTMath.html" title="class in ij.plugin">FFTMath</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#done">done</a></span> - Variable in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#done--">done()</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#DONE">DONE</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the filter does not want its run method called.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#doNotSaveWindowLocations">doNotSaveWindowLocations</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Enable this option to workaround a bug with some Linux window
managers that causes windows to wander down the screen.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#dontSaveHeaders">dontSaveHeaders</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Don't save Results table column headers</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#dontSaveRowNumbers">dontSaveRowNumbers</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Don't save Results table row numbers</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Profiler.html#doOptions--">doOptions()</a></span> - Method in class ij.plugin.<a href="ij/plugin/Profiler.html" title="class in ij.plugin">Profiler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#doProjection--">doProjection()</a></span> - Method in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd>
<div class="block">Performs actual projection using specified method.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#doProjection-boolean-">doProjection(boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd>
<div class="block">Performs actual projection using specified method.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#doRGBProjection--">doRGBProjection()</a></span> - Method in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#doRGBProjection-boolean-">doRGBProjection(boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#DOT">DOT</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Display points using a single pixel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#DOUBLE_CLICK_THRESHOLD">DOUBLE_CLICK_THRESHOLD</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#DOUBLE_HEADED">DOUBLE_HEADED</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#DOUBLE_HEADED_KEY">DOUBLE_HEADED_KEY</a></span> - Static variable in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#doubleBuffer">doubleBuffer</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Double buffer display of selections and overlays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#doWand-int-int-">doWand(int, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Equivalent to clicking on the current image at (x,y) with the
wand tool.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#doWand-int-int-double-java.lang.String-">doWand(int, int, double, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Traces the boundary of the area with pixel values within
'tolerance' of the value of the pixel at the starting location.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#doWand-ij.ImagePlus-int-int-double-java.lang.String-">doWand(ImagePlus, int, int, double, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">This version of doWand adds an ImagePlus argument.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PluginInstaller.html#download-java.lang.String-java.lang.String-">download(String, String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/PluginInstaller.html" title="class in ij.plugin">PluginInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Macro_Runner.html#downloadJar-java.lang.String-">downloadJar(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Macro_Runner.html" title="class in ij.plugin">Macro_Runner</a></dt>
<dd> </dd>
<dt><a href="ij/process/DownsizeTable.html" title="class in ij.process"><span class="typeNameLink">DownsizeTable</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">A table for easier downsizing by convolution with a kernel.</div>
</dd>
<dt><a href="ij/plugin/DragAndDrop.html" title="class in ij.plugin"><span class="typeNameLink">DragAndDrop</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This class opens images, roi's, luts and text files dragged and dropped on the "ImageJ" window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/DragAndDrop.html#DragAndDrop--">DragAndDrop()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/DragAndDrop.html" title="class in ij.plugin">DragAndDrop</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/DragAndDrop.html#dragEnter-java.awt.dnd.DropTargetDragEvent-">dragEnter(DropTargetDragEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/DragAndDrop.html" title="class in ij.plugin">DragAndDrop</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/DragAndDrop.html#dragExit-java.awt.dnd.DropTargetEvent-">dragExit(DropTargetEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/DragAndDrop.html" title="class in ij.plugin">DragAndDrop</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/DragAndDrop.html#dragOver-java.awt.dnd.DropTargetDragEvent-">dragOver(DropTargetDragEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/DragAndDrop.html" title="class in ij.plugin">DragAndDrop</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#draw-java.awt.Graphics-">draw(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd>
<div class="block">Draws this arrow on the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/EllipseRoi.html#draw-java.awt.Graphics-">draw(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/EllipseRoi.html" title="class in ij.gui">EllipseRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageRoi.html#draw-java.awt.Graphics-">draw(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageRoi.html" title="class in ij.gui">ImageRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#draw-java.awt.Graphics-">draw(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd>
<div class="block">Draws this line on the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/OvalRoi.html#draw-java.awt.Graphics-">draw(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/OvalRoi.html" title="class in ij.gui">OvalRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#draw--">draw()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Draws the plot specified for the first time.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#draw--">draw()</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Displays the plot.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#draw-java.awt.Graphics-">draw(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Draws the points on the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#draw-java.awt.Graphics-">draw(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#draw-java.awt.Graphics-">draw(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/RotatedRectRoi.html#draw-java.awt.Graphics-">draw(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/RotatedRectRoi.html" title="class in ij.gui">RotatedRectRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#draw-java.awt.Graphics-">draw(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Non-destructively draws the shape of this object on the associated ImagePlus.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#draw-java.awt.Graphics-">draw(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Draws the text on the screen, clipped to the ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#draw--">draw()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Draws the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#draw-int-int-int-int-">draw(int, int, int, int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Draws image and roi outline using a clip rect.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Filler.html#draw-ij.process.ImageProcessor-">draw(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Filler.html" title="class in ij.plugin.filter">Filler</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by ImageProcessor.draw(Roi)</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#draw-ij.gui.Roi-">draw(Roi)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Draws the specified ROI on this image using the line
width and color defined by ip.setLineWidth() and ip.setColor().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#DRAW_LINE">DRAW_LINE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#DRAW_OFFSET">DRAW_OFFSET</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#DRAW_OVAL">DRAW_OVAL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#DRAW_RECT">DRAW_RECT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#DRAW_STRING">DRAW_STRING</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#drawArrow-int-int-int-int-double-">drawArrow(int, int, int, int, double)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">Use as a public method is not supported any more because it is incompatible with rescaling</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#drawBackgrounds-boolean-">drawBackgrounds(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/LookUpTable.html#drawColorBar-java.awt.Graphics-int-int-int-int-">drawColorBar(Graphics, int, int, int, int)</a></span> - Method in class ij.<a href="ij/LookUpTable.html" title="class in ij">LookUpTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#drawDot-int-int-">drawDot(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Draws a dot using the current line width and fill/draw value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#drawDot2-int-int-">drawDot2(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span> </div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#drawDottedLine-double-double-double-double-int-">drawDottedLine(double, double, double, double, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/EllipseFitter.html#drawEllipse-ij.process.ImageProcessor-">drawEllipse(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/EllipseFitter.html" title="class in ij.process">EllipseFitter</a></dt>
<dd>
<div class="block">Draws the ellipse on the specified image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#drawEllipse-ij.process.ImageProcessor-">drawEllipse(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#drawHistogram-ij.process.ImageProcessor-boolean-">drawHistogram(ImageProcessor, boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#drawInfo-java.awt.Graphics-">drawInfo(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd>
<div class="block">Draws the subtitle.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#drawingColor">drawingColor</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Filler.html#drawLabel-ij.ImagePlus-ij.process.ImageProcessor-int-java.awt.Rectangle-">drawLabel(ImagePlus, ImageProcessor, int, Rectangle)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Filler.html" title="class in ij.plugin.filter">Filler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#drawLabels-boolean-">drawLabels(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#drawLabels-boolean-">drawLabels(boolean)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#drawLine-int-int-">drawLine(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#drawLine-double-double-double-double-">drawLine(double, double, double, double)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#drawLine-int-int-int-int-">drawLine(int, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Draws a line from (x1,y1) to (x2,y2).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#drawLine4-int-int-int-int-">drawLine4(int, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#drawNames-boolean-">drawNames(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#drawNormalizedLine-double-double-double-double-">drawNormalizedLine(double, double, double, double)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Draws a line using a normalized 0-1, 0-1 coordinate system,
with (0,0) at the top left and (1,1) at the lower right corner.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#drawOval-int-int-int-int-">drawOval(int, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Draws an elliptical shape.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#drawOverlay-java.awt.Graphics-">drawOverlay(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#drawOverlay-java.awt.Graphics-">drawOverlay(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#drawOverlay-ij.gui.Overlay-">drawOverlay(Overlay)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Draws the specified Overlay on this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#drawParticle-ij.process.ImageProcessor-ij.gui.Roi-ij.process.ImageStatistics-ij.process.ImageProcessor-">drawParticle(ImageProcessor, Roi, ImageStatistics, ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Draws a selected particle in a separate image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#drawPixel-int-int-">drawPixel(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Draws a pixel in the current foreground color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#drawPixel-int-int-">drawPixel(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Draws a pixel in the current foreground color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#drawPixel-int-int-">drawPixel(int, int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Draws a pixel in the current foreground color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#drawPixel-int-int-">drawPixel(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets the pixel at (x,y) to the current fill/draw value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#drawPixel-int-int-">drawPixel(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Draws a pixel in the current foreground color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#drawPixels-ij.process.ImageProcessor-">drawPixels(ImageProcessor)</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#drawPixels-ij.process.ImageProcessor-">drawPixels(ImageProcessor)</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/OvalRoi.html#drawPixels-ij.process.ImageProcessor-">drawPixels(ImageProcessor)</a></span> - Method in class ij.gui.<a href="ij/gui/OvalRoi.html" title="class in ij.gui">OvalRoi</a></dt>
<dd>
<div class="block">Draws an outline of this OvalRoi on the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#drawPixels-ij.process.ImageProcessor-">drawPixels(ImageProcessor)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#drawPixels-ij.process.ImageProcessor-">drawPixels(ImageProcessor)</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#drawPixels--">drawPixels()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by drawPixels(ImageProcessor)</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#drawPixels-ij.process.ImageProcessor-">drawPixels(ImageProcessor)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Draws the selection outline on the specified ImageProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#drawPixels-ij.process.ImageProcessor-">drawPixels(ImageProcessor)</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Draws the shape of this object onto the specified ImageProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#drawPixels-ij.process.ImageProcessor-">drawPixels(ImageProcessor)</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Renders the text on the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#drawPlot-ij.gui.Plot-">drawPlot(Plot)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Draws a new plot in this window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#drawPolygon-java.awt.Polygon-">drawPolygon(Polygon)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Draws a polygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#drawRect-int-int-int-int-">drawRect(int, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Draws a rectangle.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#drawRoi-ij.gui.Roi-">drawRoi(Roi)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Draws the specified ROI on this image using the stroke
width, stroke color and fill color defined by roi.setStrokeWidth,
roi.setStrokeColor() and roi.setFillColor().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#drawRoiBrush-java.awt.Graphics-">drawRoiBrush(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#drawSphere-double-int-int-int-">drawSphere(double, int, int, int)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Experimental</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#drawString-java.lang.String-">drawString(String)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Draws a string at the current drawing location using the current fill/draw value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#drawString-java.lang.String-int-int-">drawString(String, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Draws a string at the specified location using the current fill/draw value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#drawString-java.lang.String-int-int-java.awt.Color-">drawString(String, int, int, Color)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Draws a string at the specified location with a filled background.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/LookUpTable.html#drawUnscaledColorBar-ij.process.ImageProcessor-int-int-int-int-">drawUnscaledColorBar(ImageProcessor, int, int, int, int)</a></span> - Method in class ij.<a href="ij/LookUpTable.html" title="class in ij">LookUpTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#drawVectors-double:A-double:A-double:A-double:A-">drawVectors(double[], double[], double[], double[])</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adds a set of points that will be drawn as ARROWs.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#drawVectors-java.util.ArrayList-java.util.ArrayList-java.util.ArrayList-java.util.ArrayList-">drawVectors(ArrayList, ArrayList, ArrayList, ArrayList)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adds a set of vectors to the plot using double ArrayLists.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/DragAndDrop.html#drop-java.awt.dnd.DropTargetDropEvent-">drop(DropTargetDropEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/DragAndDrop.html" title="class in ij.plugin">DragAndDrop</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/DragAndDrop.html#dropActionChanged-java.awt.dnd.DropTargetDragEvent-">dropActionChanged(DropTargetDragEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/DragAndDrop.html" title="class in ij.plugin">DragAndDrop</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#DROPPER">DROPPER</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#dstHeight">dstHeight</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#dstWidth">dstWidth</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#DUMP">DUMP</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Program.html#dumpProgram--">dumpProgram()</a></span> - Method in class ij.macro.<a href="ij/macro/Program.html" title="class in ij.macro">Program</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Program.html#dumpSymbolTable--">dumpSymbolTable()</a></span> - Method in class ij.macro.<a href="ij/macro/Program.html" title="class in ij.macro">Program</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#duplicate--">duplicate()</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Returns a clone of this Overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#duplicate--">duplicate()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns a copy of this image or stack, cropped if there is an ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#duplicate--">duplicate()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Duplicates this stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#duplicate--">duplicate()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Returns a duplicate of this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#duplicate--">duplicate()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns a duplicate of this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatPolygon.html#duplicate--">duplicate()</a></span> - Method in class ij.process.<a href="ij/process/FloatPolygon.html" title="class in ij.process">FloatPolygon</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#duplicate--">duplicate()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Returns a duplicate of this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#duplicate--">duplicate()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a duplicate of this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#duplicate--">duplicate()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Returns a duplicate of this image.</div>
</dd>
<dt><a href="ij/plugin/filter/Duplicater.html" title="class in ij.plugin.filter"><span class="typeNameLink">Duplicater</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by Duplicator class</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Duplicater.html#Duplicater--">Duplicater()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Duplicater.html" title="class in ij.plugin.filter">Duplicater</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span></div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Duplicater.html#duplicateStack-ij.ImagePlus-java.lang.String-">duplicateStack(ImagePlus, String)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Duplicater.html" title="class in ij.plugin.filter">Duplicater</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span></div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Duplicater.html#duplicateSubstack-ij.ImagePlus-java.lang.String-int-int-">duplicateSubstack(ImagePlus, String, int, int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Duplicater.html" title="class in ij.plugin.filter">Duplicater</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span></div>
</dd>
<dt><a href="ij/plugin/Duplicator.html" title="class in ij.plugin"><span class="typeNameLink">Duplicator</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Image/Duplicate command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Duplicator.html#Duplicator--">Duplicator()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Duplicator.html" title="class in ij.plugin">Duplicator</a></dt>
<dd> </dd>
</dl>
<a name="I:E">
<!-- -->
</a>
<h2 class="title">E</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Shadows.html#east-ij.process.ImageProcessor-">east(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Shadows.html" title="class in ij.plugin.filter">Shadows</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame"><span class="typeNameLink">Editor</span></a> - Class in <a href="ij/plugin/frame/package-summary.html">ij.plugin.frame</a></dt>
<dd>
<div class="block">This is a simple TextArea based editor for editing and compiling plugins.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#Editor--">Editor()</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#Editor-int-int-int-int-">Editor(int, int, int, int)</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter"><span class="typeNameLink">EDM</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This plugin implements the Euclidean Distance Map (EDM), Watershed,
Ultimate Eroded Points and Voronoi commands in the Process/Binary submenu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#EDM--">EDM()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#edPaste-java.lang.String-">edPaste(String)</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Wand.html#EIGHT_CONNECTED">EIGHT_CONNECTED</a></span> - Static variable in class ij.gui.<a href="ij/gui/Wand.html" title="class in ij.gui">Wand</a></dt>
<dd>
<div class="block">Wand operation type: trace outline of 8-connected pixels</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#ELLIPSE">ELLIPSE</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#ELLIPSE">ELLIPSE</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#ELLIPSE_ROI">ELLIPSE_ROI</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><a href="ij/process/EllipseFitter.html" title="class in ij.process"><span class="typeNameLink">EllipseFitter</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This class fits an ellipse to an ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/EllipseFitter.html#EllipseFitter--">EllipseFitter()</a></span> - Constructor for class ij.process.<a href="ij/process/EllipseFitter.html" title="class in ij.process">EllipseFitter</a></dt>
<dd> </dd>
<dt><a href="ij/gui/EllipseRoi.html" title="class in ij.gui"><span class="typeNameLink">EllipseRoi</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This class implements the ellipse selection tool.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/EllipseRoi.html#EllipseRoi-double-double-double-double-double-">EllipseRoi(double, double, double, double, double)</a></span> - Constructor for class ij.gui.<a href="ij/gui/EllipseRoi.html" title="class in ij.gui">EllipseRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/EllipseRoi.html#EllipseRoi-int-int-ij.ImagePlus-">EllipseRoi(int, int, ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/EllipseRoi.html" title="class in ij.gui">EllipseRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#ELLIPSES">ELLIPSES</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#ELSE">ELSE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#EMBEDDED">EMBEDDED</a></span> - Static variable in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Run embedded in another application.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#enableDebugging--">enableDebugging()</a></span> - Method in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#enableSubPixelResolution--">enableSubPixelResolution()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#enableSubPixelResolution--">enableSubPixelResolution()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#enableYesNoCancel--">enableYesNoCancel()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Make this a "Yes No Cancel" dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#enableYesNoCancel-java.lang.String-java.lang.String-">enableYesNoCancel(String, String)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Make this a "Yes No Cancel" dialog with custom labels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#endPaste--">endPaste()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#ENDS_WITH">ENDS_WITH</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#enhancedLineTool">enhancedLineTool</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Allow lines to be created with one click at start and another at the end</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiEnlarger.html#enlarge-ij.gui.Roi-double-">enlarge(Roi, double)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/RoiEnlarger.html" title="class in ij.plugin">RoiEnlarger</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#EOF">EOF</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#EQ">EQ</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ContrastEnhancer.html#equalize-ij.ImagePlus-">equalize(ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ContrastEnhancer.html" title="class in ij.plugin">ContrastEnhancer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ContrastEnhancer.html#equalize-ij.process.ImageProcessor-">equalize(ImageProcessor)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ContrastEnhancer.html" title="class in ij.plugin">ContrastEnhancer</a></dt>
<dd>
<div class="block">Changes the tone curves of images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#equals-java.lang.Object-">equals(Object)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Checks whether two rectangles are equal.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#equals-ij.measure.Calibration-">equals(Calibration)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Compares two Calibration objects for equality.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#erode--">erode()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#erode-int-int-">erode(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#erode--">erode()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#erode--">erode()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Not implemented.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#erode--">erode()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Erodes the image or ROI using a 3x3 maximum filter.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#erode--">erode()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Not implemented.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#error-java.lang.String-">error(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Displays a message in a dialog box titled "ImageJ".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#error-java.lang.String-java.lang.String-">error(String, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Displays a message in a dialog box with the specified title.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HTMLDialog.html#escapePressed--">escapePressed()</a></span> - Method in class ij.gui.<a href="ij/gui/HTMLDialog.html" title="class in ij.gui">HTMLDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MessageDialog.html#escapePressed--">escapePressed()</a></span> - Method in class ij.gui.<a href="ij/gui/MessageDialog.html" title="class in ij.gui">MessageDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#escapePressed--">escapePressed()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if the <code>Esc</code> key was pressed since the
last ImageJ command started to execute or since resetEscape() was called.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/WaitForUserDialog.html#escPressed--">escPressed()</a></span> - Method in class ij.gui.<a href="ij/gui/WaitForUserDialog.html" title="class in ij.gui">WaitForUserDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#EVAL">EVAL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/SplineFitter.html#evalSpline-double-">evalSpline(double)</a></span> - Method in class ij.measure.<a href="ij/measure/SplineFitter.html" title="class in ij.measure">SplineFitter</a></dt>
<dd>
<div class="block">Evalutes spline function at given point</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/SplineFitter.html#evalSpline-int:A-int:A-int-double-">evalSpline(int[], int[], int, double)</a></span> - Method in class ij.measure.<a href="ij/measure/SplineFitter.html" title="class in ij.measure">SplineFitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/SplineFitter.html#evalSpline-float:A-float:A-int-double-">evalSpline(float[], float[], int, double)</a></span> - Method in class ij.measure.<a href="ij/measure/SplineFitter.html" title="class in ij.measure">SplineFitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#evaluateScript-java.lang.String-">evaluateScript(String)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/EventListener.html" title="class in ij.plugin"><span class="typeNameLink">EventListener</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Plugins/Utilities/Monitor Events command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/EventListener.html#EventListener--">EventListener()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/EventListener.html" title="class in ij.plugin">EventListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJEventListener.html#eventOccurred-int-">eventOccurred(int)</a></span> - Method in interface ij.<a href="ij/IJEventListener.html" title="interface in ij">IJEventListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/EventListener.html#eventOccurred-int-">eventOccurred(int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/EventListener.html" title="class in ij.plugin">EventListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#EXCLUDE_EDGE_PARTICLES">EXCLUDE_EDGE_PARTICLES</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Do not measure particles touching edge of image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FolderOpener.html#excludedFileType-java.lang.String-">excludedFileType(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/FolderOpener.html" title="class in ij.plugin">FolderOpener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#excludeEdgeParticles">excludeEdgeParticles</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#EXEC">EXEC</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><a href="ij/Executer.html" title="class in ij"><span class="typeNameLink">Executer</span></a> - Class in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">Runs ImageJ menu commands in a separate thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Executer.html#Executer-java.lang.String-">Executer(String)</a></span> - Constructor for class ij.<a href="ij/Executer.html" title="class in ij">Executer</a></dt>
<dd>
<div class="block">Create an Executer to run the specified menu command
in this thread using the active image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Executer.html#Executer-java.lang.String-ij.ImagePlus-">Executer(String, ImagePlus)</a></span> - Constructor for class ij.<a href="ij/Executer.html" title="class in ij">Executer</a></dt>
<dd>
<div class="block">Create an Executer that runs the specified menu
command in a separate thread using the specified image,
or using the active image if 'imp' is null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#EXIT">EXIT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#exitConstructingMode--">exitConstructingMode()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#exitWhenQuitting-boolean-">exitWhenQuitting(boolean)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">ImageJ calls System.exit() when qutting when 'exitWhenQuitting' is true.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#EXP">EXP</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#exp--">exp()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#exp--">exp()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Performs a exponential transform on the image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#exp--">exp()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#EXP_RECOVERY">EXP_RECOVERY</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#EXP_RECOVERY">EXP_RECOVERY</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#EXP_RECOVERY_NOOFFSET">EXP_RECOVERY_NOOFFSET</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#EXP_REGRESSION">EXP_REGRESSION</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#EXP_WITH_OFFSET">EXP_WITH_OFFSET</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#EXP_WITH_OFFSET">EXP_WITH_OFFSET</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CanvasResizer.html#expandImage-ij.process.ImageProcessor-int-int-int-int-">expandImage(ImageProcessor, int, int, int, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CanvasResizer.html" title="class in ij.plugin">CanvasResizer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CanvasResizer.html#expandStack-ij.ImageStack-int-int-int-int-">expandStack(ImageStack, int, int, int, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CanvasResizer.html" title="class in ij.plugin">CanvasResizer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#EXPONENTIAL">EXPONENTIAL</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#EXPONENTIAL">EXPONENTIAL</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#EXT">EXT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/RoiListener.html#EXTENDED">EXTENDED</a></span> - Static variable in interface ij.gui.<a href="ij/gui/RoiListener.html" title="interface in ij.gui">RoiListener</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/ExtendedPlugInFilter.html" title="interface in ij.plugin.filter"><span class="typeNameLink">ExtendedPlugInFilter</span></a> - Interface in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">ImageJ plugins that process an image may implement this interface.</div>
</dd>
<dt><a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro"><span class="typeNameLink">ExtensionDescriptor</span></a> - Class in <a href="ij/macro/package-summary.html">ij.macro</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#ExtensionDescriptor-java.lang.String-int:A-ij.macro.MacroExtension-">ExtensionDescriptor(String, int[], MacroExtension)</a></span> - Constructor for class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
</dl>
<a name="I:F">
<!-- -->
</a>
<h2 class="title">F</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#f-double-">f(double)</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Returns the formula value for parameters 'p' at 'x'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#f-double:A-double-">f(double[], double)</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Returns the formula value for parameters 'p' at 'x'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#f-int-double:A-double-">f(int, double[], double)</a></span> - Static method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Returns value of built-in 'fitType' formula value for parameters "p" at "x"</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#f2hex-float-">f2hex(float)</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd>
<div class="block">Converts a float to an 9 byte hex string starting with '#'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#FALSE">FALSE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Debugger.html#FAST_TRACE">FAST_TRACE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/Debugger.html" title="interface in ij.macro">Debugger</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#FCOLOR">FCOLOR</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#FERET">FERET</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#FERET">FERET</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#FERET_ANGLE">FERET_ANGLE</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#FERET_X">FERET_X</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#FERET_Y">FERET_Y</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/FFT.html" title="class in ij.plugin"><span class="typeNameLink">FFT</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This class implements the FFT, Inverse FFT and Redisplay Power Spectrum commands
in the Process/FFT submenu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FFT.html#FFT--">FFT()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/FFT.html" title="class in ij.plugin">FFT</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/FFTCustomFilter.html" title="class in ij.plugin.filter"><span class="typeNameLink">FFTCustomFilter</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This class implements the Process/FFT/Custom Filter command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/FFTCustomFilter.html#FFTCustomFilter--">FFTCustomFilter()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/FFTCustomFilter.html" title="class in ij.plugin.filter">FFTCustomFilter</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/FFTFilter.html" title="class in ij.plugin.filter"><span class="typeNameLink">FFTFilter</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This class implements the Process/FFT/Bandpass Filter command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/FFTFilter.html#FFTFilter--">FFTFilter()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/FFTFilter.html" title="class in ij.plugin.filter">FFTFilter</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/FFTMath.html" title="class in ij.plugin"><span class="typeNameLink">FFTMath</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">The class implements the Process/FFT/Math command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FFTMath.html#FFTMath--">FFTMath()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/FFTMath.html" title="class in ij.plugin">FFTMath</a></dt>
<dd> </dd>
<dt><a href="ij/process/FHT.html" title="class in ij.process"><span class="typeNameLink">FHT</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This class contains a Java implementation of the Fast Hartley
Transform.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#FHT-ij.process.ImageProcessor-">FHT(ImageProcessor)</a></span> - Constructor for class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Constructs a FHT object from an ImageProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#FHT-ij.process.ImageProcessor-boolean-">FHT(ImageProcessor, boolean)</a></span> - Constructor for class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#FHT--">FHT()</a></span> - Constructor for class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#FILE">FILE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#fileChanged--">fileChanged()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#fileFormat">fileFormat</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><a href="ij/io/FileInfo.html" title="class in ij.io"><span class="typeNameLink">FileInfo</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">This class consists of public fields that describe an image file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#FileInfo--">FileInfo()</a></span> - Constructor for class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">Creates a FileInfo object with all of its fields set to their default value.</div>
</dd>
<dt><a href="ij/plugin/FileInfoVirtualStack.html" title="class in ij.plugin"><span class="typeNameLink">FileInfoVirtualStack</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin opens a multi-page TIFF file as a virtual stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FileInfoVirtualStack.html#FileInfoVirtualStack--">FileInfoVirtualStack()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/FileInfoVirtualStack.html" title="class in ij.plugin">FileInfoVirtualStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FileInfoVirtualStack.html#FileInfoVirtualStack-ij.io.FileInfo-">FileInfoVirtualStack(FileInfo)</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/FileInfoVirtualStack.html" title="class in ij.plugin">FileInfoVirtualStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FileInfoVirtualStack.html#FileInfoVirtualStack-ij.io.FileInfo-boolean-">FileInfoVirtualStack(FileInfo, boolean)</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/FileInfoVirtualStack.html" title="class in ij.plugin">FileInfoVirtualStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#fileName">fileName</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FFT.html#fileName">fileName</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/FFT.html" title="class in ij.plugin">FFT</a></dt>
<dd> </dd>
<dt><a href="ij/io/FileOpener.html" title="class in ij.io"><span class="typeNameLink">FileOpener</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">Opens or reverts an image specified by a FileInfo object.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileOpener.html#FileOpener-ij.io.FileInfo-">FileOpener(FileInfo)</a></span> - Constructor for class ij.io.<a href="ij/io/FileOpener.html" title="class in ij.io">FileOpener</a></dt>
<dd> </dd>
<dt><a href="ij/io/FileSaver.html" title="class in ij.io"><span class="typeNameLink">FileSaver</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">Saves images in tiff, gif, jpeg, raw, zip and text format.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#FileSaver-ij.ImagePlus-">FileSaver(ImagePlus)</a></span> - Constructor for class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Constructs a FileSaver from an ImagePlus.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#fileType">fileType</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#FILL">FILL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Filler.html#fill-ij.process.ImageProcessor-">fill(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Filler.html" title="class in ij.plugin.filter">Filler</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by ImageProcessor.fill(Roi)</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#fill-ij.process.ImageProcessor-">fill(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Sets pixels that are within roi and part of the mask to the foreground
color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#fill-ij.process.ImageProcessor-">fill(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Fills pixels that are within roi and part of the mask.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#fill--">fill()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Fills the current rectangular ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#fill--">fill()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Fills the current rectangular ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#fill-ij.process.ImageProcessor-">fill(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Fills pixels that are within roi and part of the mask.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloodFiller.html#fill-int-int-">fill(int, int)</a></span> - Method in class ij.process.<a href="ij/process/FloodFiller.html" title="class in ij.process">FloodFiller</a></dt>
<dd>
<div class="block">Does a 4-connected flood fill using the current fill/draw
value, which is defined by ImageProcessor.setValue().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#fill--">fill()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Fills the image or ROI bounding rectangle with the current fill/draw value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#fill-ij.process.ImageProcessor-">fill(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Fills pixels that are within the ROI bounding rectangle and part of
the mask (i.e.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#fill-ij.gui.Roi-">fill(Roi)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Fills the ROI with the current fill/draw value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/PolygonFiller.html#fill-ij.process.ImageProcessor-java.awt.Rectangle-">fill(ImageProcessor, Rectangle)</a></span> - Method in class ij.process.<a href="ij/process/PolygonFiller.html" title="class in ij.process">PolygonFiller</a></dt>
<dd>
<div class="block">Fills the polygon using the ImageProcessor's current drawing color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#fill--">fill()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Fills the current rectangular ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#fill-ij.process.ImageProcessor-">fill(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Fills pixels that are within roi and part of the mask.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloodFiller.html#fill8-int-int-">fill8(int, int)</a></span> - Method in class ij.process.<a href="ij/process/FloodFiller.html" title="class in ij.process">FloodFiller</a></dt>
<dd>
<div class="block">Does a 8-connected flood fill using the current fill/draw
value, which is defined by ImageProcessor.setValue().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#FILL_BLACK">FILL_BLACK</a></span> - Static variable in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#FILL_COLOR">FILL_COLOR</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#FILL_OVAL">FILL_OVAL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#FILL_RAMP">FILL_RAMP</a></span> - Static variable in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#FILL_RANDOM">FILL_RANDOM</a></span> - Static variable in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#FILL_RECT">FILL_RECT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#FILL_WHITE">FILL_WHITE</a></span> - Static variable in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#fillColor">fillColor</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#FILLED">FILLED</a></span> - Static variable in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/Filler.html" title="class in ij.plugin.filter"><span class="typeNameLink">Filler</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This plugin implements ImageJ's Fill, Clear, Clear Outside and Draw commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Filler.html#Filler--">Filler()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Filler.html" title="class in ij.plugin.filter">Filler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#fillOutside-ij.gui.Roi-">fillOutside(Roi)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Fills outside an Roi.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#fillOval-int-int-int-int-">fillOval(int, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Fills an elliptical shape.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#fillPolygon-java.awt.Polygon-">fillPolygon(Polygon)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Fills a polygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#fillRect-int-int-int-int-">fillRect(int, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Fills a rectangle.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Filters3D.html#filter-ij.ImageStack-int-float-float-float-">filter(ImageStack, int, float, float, float)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Filters3D.html" title="class in ij.plugin">Filters3D</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#filter-int-">filter(int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Filters using a 3x3 neighborhood.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#filter-int-">filter(int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">A 3x3 filter operation, where the argument (ImageProcessor.BLUR_MORE, FIND_EDGES,
MEDIAN_FILTER, MIN or MAX) determines the filter type.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#filter-int-">filter(int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Filters using a 3x3 neighborhood.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#filter-int-">filter(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">A 3x3 filter operation, where the argument (BLUR_MORE, FIND_EDGES,
MEDIAN_FILTER, MIN or MAX) determines the filter type.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#filter-int-">filter(int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Filters using a 3x3 neighborhood.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Undo.html#FILTER">FILTER</a></span> - Static variable in class ij.<a href="ij/Undo.html" title="class in ij">Undo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#filter3D-ij.ImageStack-float-float-float-int-int-int-">filter3D(ImageStack, float, float, float, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd>
<div class="block">3D filter using threads</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#FILTER_MAX">FILTER_MAX</a></span> - Static variable in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#FILTER_MAXLOCAL">FILTER_MAXLOCAL</a></span> - Static variable in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#FILTER_MEAN">FILTER_MEAN</a></span> - Static variable in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#FILTER_MEDIAN">FILTER_MEDIAN</a></span> - Static variable in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#FILTER_MIN">FILTER_MIN</a></span> - Static variable in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#FILTER_VAR">FILTER_VAR</a></span> - Static variable in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#filterRGB-int-double-">filterRGB(int, double)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Performs the specified filter on the red, green and blue planes of this image.</div>
</dd>
<dt><a href="ij/plugin/filter/Filters.html" title="class in ij.plugin.filter"><span class="typeNameLink">Filters</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This plugin implements the Invert, Smooth, Sharpen, Find Edges,
and Add Noise commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Filters.html#Filters--">Filters()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Filters.html" title="class in ij.plugin.filter">Filters</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Filters3D.html" title="class in ij.plugin"><span class="typeNameLink">Filters3D</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Filters3D.html#Filters3D--">Filters3D()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Filters3D.html" title="class in ij.plugin">Filters3D</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#FILTERS_MENU">FILTERS_MENU</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#FINAL_PROCESSING">FINAL_PROCESSING</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the setup method of the filter should be called again after
the calls to the run(ip) have finished.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#FIND_EDGES">FIND_EDGES</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#findAllMenuItems--">findAllMenuItems()</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#findEdges--">findEdges()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#findEdges--">findEdges()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Finds edges in the image or ROI using a Sobel operator.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#findMaxima-double:A-double-int-">findMaxima(double[], double, int)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd>
<div class="block">Calculates peak positions of 1D array N.Vischer, 06-mar-2017</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#findMaxima-double:A-double-boolean-">findMaxima(double[], double, boolean)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#findMaxima-ij.process.ImageProcessor-double-int-boolean-">findMaxima(ImageProcessor, double, int, boolean)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd>
<div class="block">Find the maxima of an image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#findMaxima-ij.process.ImageProcessor-double-double-int-boolean-boolean-">findMaxima(ImageProcessor, double, double, int, boolean, boolean)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd>
<div class="block">Here the processing is done: Find the maxima of an image (does not find minima).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#findMinAndMax--">findMinAndMax()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Calculates the minimum and maximum pixel value for the entire image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#findMinAndMax--">findMinAndMax()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#findMinima-double:A-double-boolean-">findMinima(double[], double, boolean)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd>
<div class="block">Returns minimum positions of array xx, sorted with decreasing strength</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#findMinima-double:A-double-int-">findMinima(double[], double, int)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#findNthLowestNumber-float:A-int-int-">findNthLowestNumber(float[], int, int)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd>
<div class="block">Find the n-th lowest number in part of an array</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#FIT">FIT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/EllipseFitter.html#fit-ij.process.ImageProcessor-ij.process.ImageStatistics-">fit(ImageProcessor, ImageStatistics)</a></span> - Method in class ij.process.<a href="ij/process/EllipseFitter.html" title="class in ij.process">EllipseFitter</a></dt>
<dd>
<div class="block">Fits an ellipse to the current ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#fitList">fitList</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Names of the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#FITS">FITS</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#FITS">FITS</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/FITS_Reader.html" title="class in ij.plugin"><span class="typeNameLink">FITS_Reader</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Opens and displays FITS images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FITS_Reader.html#FITS_Reader--">FITS_Reader()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/FITS_Reader.html" title="class in ij.plugin">FITS_Reader</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/FITS_Writer.html" title="class in ij.plugin"><span class="typeNameLink">FITS_Writer</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin saves a 16 or 32 bit image in FITS format.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FITS_Writer.html#FITS_Writer--">FITS_Writer()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/FITS_Writer.html" title="class in ij.plugin">FITS_Writer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#fitSpline-int-">fitSpline(int)</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#fitSpline--">fitSpline()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#fitSplineForStraightening--">fitSplineForStraightening()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/frame/Fitter.html" title="class in ij.plugin.frame"><span class="typeNameLink">Fitter</span></a> - Class in <a href="ij/plugin/frame/package-summary.html">ij.plugin.frame</a></dt>
<dd>
<div class="block">ImageJ plugin that does curve fitting using the modified CurveFitter class.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Fitter.html#Fitter--">Fitter()</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/Fitter.html" title="class in ij.plugin.frame">Fitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#fitToWindow--">fitToWindow()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#fitToWindow--">fitToWindow()</a></span> - Method in class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">Resizes the plot (unless frozen) to fit the window</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GUI.html#fix-java.awt.Scrollbar-">fix(Scrollbar)</a></span> - Static method in class ij.gui.<a href="ij/gui/GUI.html" title="class in ij.gui">GUI</a></dt>
<dd>
<div class="block">Lightens overly dark scrollbar background on Windows 8.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#fixLineEndings--">fixLineEndings()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd>
<div class="block">Changes Mac OS 9 (CR) and Windows (CRLF) line separators to line feeds (LF).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#fixNewLines-java.lang.String-">fixNewLines(String)</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd>
<div class="block">Converts carriage returns to line feeds.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#flags">flags</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#flatten--">flatten()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns a "flattened" version of this image, in RGB format.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#flattenScale">flattenScale</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#flattenStack--">flattenStack()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Flattens all slices of this stack or HyperStack.<br></div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#flattenTitle">flattenTitle</a></span> - Static variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Title of image used by Flatten command</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#FLATTOP">FLATTOP</a></span> - Static variable in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#flipHorizontal--">flipHorizontal()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Flips the image or ROI horizontally.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#flipHorizontal--">flipHorizontal()</a></span> - Method in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackReverser.html#flipStack-ij.ImagePlus-">flipStack(ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackReverser.html" title="class in ij.plugin">StackReverser</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#flipVertical--">flipVertical()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#flipVertical--">flipVertical()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#flipVertical--">flipVertical()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#flipVertical--">flipVertical()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Flips the image or ROI vertically.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#flipVertical--">flipVertical()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#flipVertical--">flipVertical()</a></span> - Method in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#flipXZ">flipXZ</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Rotate XZ orthogonal views 180 degrees</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#fList">fList</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Equations of the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#FLOAT">FLOAT</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">Output type: new 32-bit image</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#FLOAT_PARAM">FLOAT_PARAM</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#FLOAT_STROKE_WIDTH">FLOAT_STROKE_WIDTH</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><a href="ij/process/FloatBlitter.html" title="class in ij.process"><span class="typeNameLink">FloatBlitter</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This class does bit blitting of 32-bit floating-point images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatBlitter.html#FloatBlitter-ij.process.FloatProcessor-">FloatBlitter(FloatProcessor)</a></span> - Constructor for class ij.process.<a href="ij/process/FloatBlitter.html" title="class in ij.process">FloatBlitter</a></dt>
<dd>
<div class="block">Constructs a FloatBlitter from a FloatProcessor.</div>
</dd>
<dt><a href="ij/process/FloatPolygon.html" title="class in ij.process"><span class="typeNameLink">FloatPolygon</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">Used by the Roi classes to return float coordinate arrays and to
determine if a point is inside or outside of spline fitted selections.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatPolygon.html#FloatPolygon--">FloatPolygon()</a></span> - Constructor for class ij.process.<a href="ij/process/FloatPolygon.html" title="class in ij.process">FloatPolygon</a></dt>
<dd>
<div class="block">Constructs an empty FloatPolygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatPolygon.html#FloatPolygon-float:A-float:A-">FloatPolygon(float[], float[])</a></span> - Constructor for class ij.process.<a href="ij/process/FloatPolygon.html" title="class in ij.process">FloatPolygon</a></dt>
<dd>
<div class="block">Constructs a FloatPolygon from x and y arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatPolygon.html#FloatPolygon-float:A-float:A-int-">FloatPolygon(float[], float[], int)</a></span> - Constructor for class ij.process.<a href="ij/process/FloatPolygon.html" title="class in ij.process">FloatPolygon</a></dt>
<dd>
<div class="block">Constructs a FloatPolygon from x and y arrays.</div>
</dd>
<dt><a href="ij/process/FloatProcessor.html" title="class in ij.process"><span class="typeNameLink">FloatProcessor</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This is an 32-bit floating-point image and methods that operate on that image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#FloatProcessor-int-int-float:A-">FloatProcessor(int, int, float[])</a></span> - Constructor for class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Creates a new FloatProcessor using the specified pixel array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#FloatProcessor-int-int-float:A-java.awt.image.ColorModel-">FloatProcessor(int, int, float[], ColorModel)</a></span> - Constructor for class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Creates a new FloatProcessor using the specified pixel array and ColorModel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#FloatProcessor-int-int-">FloatProcessor(int, int)</a></span> - Constructor for class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Creates a blank FloatProcessor using the default grayscale LUT that
displays zero as black.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#FloatProcessor-int-int-int:A-">FloatProcessor(int, int, int[])</a></span> - Constructor for class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Creates a FloatProcessor from an int array using the default grayscale LUT.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#FloatProcessor-int-int-double:A-">FloatProcessor(int, int, double[])</a></span> - Constructor for class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Creates a FloatProcessor from a double array using the default grayscale LUT.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#FloatProcessor-float:A:A-">FloatProcessor(float[][])</a></span> - Constructor for class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Creates a FloatProcessor from a 2D float array using the default LUT.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#FloatProcessor-int:A:A-">FloatProcessor(int[][])</a></span> - Constructor for class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Creates a FloatProcessor from a 2D int array.</div>
</dd>
<dt><a href="ij/process/FloatStatistics.html" title="class in ij.process"><span class="typeNameLink">FloatStatistics</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">32-bit (float) image statistics, including histogram.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatStatistics.html#FloatStatistics-ij.process.ImageProcessor-">FloatStatistics(ImageProcessor)</a></span> - Constructor for class ij.process.<a href="ij/process/FloatStatistics.html" title="class in ij.process">FloatStatistics</a></dt>
<dd>
<div class="block">Constructs an ImageStatistics object from a FloatProcessor
using the standard measurement options (area, mean,
mode, min and max).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatStatistics.html#FloatStatistics-ij.process.ImageProcessor-int-ij.measure.Calibration-">FloatStatistics(ImageProcessor, int, Calibration)</a></span> - Constructor for class ij.process.<a href="ij/process/FloatStatistics.html" title="class in ij.process">FloatStatistics</a></dt>
<dd>
<div class="block">Constructs a FloatStatistics object from a FloatProcessor
using the specified measurement options.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#FLOOD_FILL">FLOOD_FILL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#floodFill">floodFill</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><a href="ij/process/FloodFiller.html" title="class in ij.process"><span class="typeNameLink">FloodFiller</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This class, which does flood filling, is used by the floodFill() macro function and
by the particle analyzer
The Wikipedia at "http://en.wikipedia.org/wiki/Flood_fill" has a good
description of the algorithm used here as well as examples in C and Java.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloodFiller.html#FloodFiller-ij.process.ImageProcessor-">FloodFiller(ImageProcessor)</a></span> - Constructor for class ij.process.<a href="ij/process/FloodFiller.html" title="class in ij.process">FloodFiller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#FLOOR">FLOOR</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#flush--">flush()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Sets the ImageProcessor, Roi, AWT Image and stack image
arrays to null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/LogStream.html#flush--">flush()</a></span> - Method in class ij.io.<a href="ij/io/LogStream.html" title="class in ij.io">LogStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#fmGraphics">fmGraphics</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#fmImage">fmImage</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#focusGained-java.awt.event.FocusEvent-">focusGained(FocusEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#focusGained-java.awt.event.FocusEvent-">focusGained(FocusEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ColorThresholder.html#focusGained-java.awt.event.FocusEvent-">focusGained(FocusEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ColorThresholder.html" title="class in ij.plugin.frame">ColorThresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInDialog.html#focusGained-java.awt.event.FocusEvent-">focusGained(FocusEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInDialog.html" title="class in ij.plugin.frame">PlugInDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInFrame.html#focusGained-java.awt.event.FocusEvent-">focusGained(FocusEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInFrame.html" title="class in ij.plugin.frame">PlugInFrame</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#focusGained-java.awt.event.FocusEvent-">focusGained(FocusEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Scaler.html#focusGained-java.awt.event.FocusEvent-">focusGained(FocusEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Scaler.html" title="class in ij.plugin">Scaler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#focusGained-java.awt.event.FocusEvent-">focusGained(FocusEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#focusLost-java.awt.event.FocusEvent-">focusLost(FocusEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#focusLost-java.awt.event.FocusEvent-">focusLost(FocusEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ColorThresholder.html#focusLost-java.awt.event.FocusEvent-">focusLost(FocusEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ColorThresholder.html" title="class in ij.plugin.frame">ColorThresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInDialog.html#focusLost-java.awt.event.FocusEvent-">focusLost(FocusEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInDialog.html" title="class in ij.plugin.frame">PlugInDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInFrame.html#focusLost-java.awt.event.FocusEvent-">focusLost(FocusEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInFrame.html" title="class in ij.plugin.frame">PlugInFrame</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#focusLost-java.awt.event.FocusEvent-">focusLost(FocusEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Scaler.html#focusLost-java.awt.event.FocusEvent-">focusLost(FocusEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Scaler.html" title="class in ij.plugin">Scaler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#focusLost-java.awt.event.FocusEvent-">focusLost(FocusEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/FolderOpener.html" title="class in ij.plugin"><span class="typeNameLink">FolderOpener</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Implements the File/Import/Image Sequence command, which
opens a folder of images as a stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FolderOpener.html#FolderOpener--">FolderOpener()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/FolderOpener.html" title="class in ij.plugin">FolderOpener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#font">font</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#fontMetrics">fontMetrics</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#fontSize">fontSize</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">The plot text size, can be overridden by Plot.setFont, Plot.setFontSize, Plot.setXLabelFont etc.</div>
</dd>
<dt><a href="ij/util/FontUtil.html" title="class in ij.util"><span class="typeNameLink">FontUtil</span></a> - Class in <a href="ij/util/package-summary.html">ij.util</a></dt>
<dd>
<div class="block">This class contains static utility methods for replacing fonts that are not available on the
current system.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/FontUtil.html#FontUtil--">FontUtil()</a></span> - Constructor for class ij.util.<a href="ij/util/FontUtil.html" title="class in ij.util">FontUtil</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#FOR">FOR</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJEventListener.html#FOREGROUND_COLOR_CHANGED">FOREGROUND_COLOR_CHANGED</a></span> - Static variable in interface ij.<a href="ij/IJEventListener.html" title="interface in ij">IJEventListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Wand.html#FOUR_CONNECTED">FOUR_CONNECTED</a></span> - Static variable in class ij.gui.<a href="ij/gui/Wand.html" title="class in ij.gui">Wand</a></dt>
<dd>
<div class="block">Wand operation type: trace outline of 4-connected pixels</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#FOUR_CONNECTED">FOUR_CONNECTED</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Use 4-connected particle tracing.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#fourier1D-float:A-int-">fourier1D(float[], int)</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Calculates the Fourier amplitudes of an array, based on a 1D Fast Hartley Transform.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#fps">fps</a></span> - Variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Frame rate in frames per second</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#FPS">FPS</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/FractalBoxCounter.html" title="class in ij.plugin.filter"><span class="typeNameLink">FractalBoxCounter</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">Calculate the so-called "capacity" fractal dimension.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/FractalBoxCounter.html#FractalBoxCounter--">FractalBoxCounter()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/FractalBoxCounter.html" title="class in ij.plugin.filter">FractalBoxCounter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#frame">frame</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#FRAME">FRAME</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#frameInterval">frameInterval</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#frameInterval">frameInterval</a></span> - Variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Frame interval in 'timeUnit's</div>
</dd>
<dt><a href="ij/gui/FreehandRoi.html" title="class in ij.gui"><span class="typeNameLink">FreehandRoi</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">Freehand region of interest or freehand line of interest</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/FreehandRoi.html#FreehandRoi-int-int-ij.ImagePlus-">FreehandRoi(int, int, ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/FreehandRoi.html" title="class in ij.gui">FreehandRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#FREELINE">FREELINE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#FREELINE">FREELINE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#freeMemory--">freeMemory()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Runs the garbage collector and returns a string something
like "64K of 256MB (25%)" that shows how much of
the available memory is in use.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#FREEROI">FREEROI</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#FREEROI">FREEROI</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#freeze--">freeze()</a></span> - Static method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Freezes the active plot window, so the image does not get redrawn for zooming,
setting the range, etc.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#FROM_CHAR_CODE">FROM_CHAR_CODE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#FUNCTION">FUNCTION</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><a href="ij/macro/FunctionFinder.html" title="class in ij.macro"><span class="typeNameLink">FunctionFinder</span></a> - Class in <a href="ij/macro/package-summary.html">ij.macro</a></dt>
<dd>
<div class="block">This class implements the text editor's Macros/Find Functions command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#FunctionFinder-ij.plugin.frame.Editor-">FunctionFinder(Editor)</a></span> - Constructor for class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#FunctionFinder--">FunctionFinder()</a></span> - Constructor for class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#functionIDs">functionIDs</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><a href="ij/macro/Functions.html" title="class in ij.macro"><span class="typeNameLink">Functions</span></a> - Class in <a href="ij/macro/package-summary.html">ij.macro</a></dt>
<dd>
<div class="block">This class implements the built-in macro functions.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#functions">functions</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
</dl>
<a name="I:G">
<!-- -->
</a>
<h2 class="title">G</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#gamma-double-">gamma(double)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#gamma-double-">gamma(double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Performs gamma correction of the image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#gamma-double-">gamma(double)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#GAMMA_VARIATE">GAMMA_VARIATE</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#GAMMA_VARIATE">GAMMA_VARIATE</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#gapBetweenImages">gapBetweenImages</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#GAUSSIAN">GAUSSIAN</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#GAUSSIAN">GAUSSIAN</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#GAUSSIAN_NOOFFSET">GAUSSIAN_NOOFFSET</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><a href="ij/plugin/filter/GaussianBlur.html" title="class in ij.plugin.filter"><span class="typeNameLink">GaussianBlur</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This plug-in filter uses convolution with a Gaussian function for smoothing.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/GaussianBlur.html#GaussianBlur--">GaussianBlur()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/GaussianBlur.html" title="class in ij.plugin.filter">GaussianBlur</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/GaussianBlur3D.html" title="class in ij.plugin"><span class="typeNameLink">GaussianBlur3D</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/GaussianBlur3D.html#GaussianBlur3D--">GaussianBlur3D()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/GaussianBlur3D.html" title="class in ij.plugin">GaussianBlur3D</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/GelAnalyzer.html" title="class in ij.plugin"><span class="typeNameLink">GelAnalyzer</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin generates gel profile plots that can be analyzed using
the wand tool.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/GelAnalyzer.html#GelAnalyzer--">GelAnalyzer()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/GelAnalyzer.html" title="class in ij.plugin">GelAnalyzer</a></dt>
<dd> </dd>
<dt><a href="ij/gui/GenericDialog.html" title="class in ij.gui"><span class="typeNameLink">GenericDialog</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This class is a customizable modal dialog box.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#GenericDialog-java.lang.String-">GenericDialog(String)</a></span> - Constructor for class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Creates a new GenericDialog with the specified title.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#GenericDialog-java.lang.String-java.awt.Frame-">GenericDialog(String, Frame)</a></span> - Constructor for class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Creates a new GenericDialog using the specified title and parent frame.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#get-int-">get(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Returns the ROI with the specified index or null if the index is invalid.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#get-java.lang.String-java.lang.String-">get(String, String)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Uses the keyword <code>key</code> to retrieve a string from the
preferences file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#get-java.lang.String-double-">get(String, double)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Uses the keyword <code>key</code> to retrieve a number from the
preferences file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#get-java.lang.String-boolean-">get(String, boolean)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Uses the keyword <code>key</code> to retrieve a boolean from
the preferences file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#get-int-int-">get(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#get-int-">get(int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#get-int-int-">get(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#get-int-">get(int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#get-int-int-">get(int, int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#get-int-">get(int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#get-int-int-">get(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">This is a faster version of getPixel() that does not do bounds checking.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#get-int-">get(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#get-int-int-">get(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#get-int-">get(int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#get16BitBufferedImage--">get16BitBufferedImage()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Returns a copy of this image as a TYPE_USHORT_GRAY BufferedImage.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ContrastAdjuster.html#get16bitRangeIndex--">get16bitRangeIndex()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/ContrastAdjuster.html" title="class in ij.plugin.frame">ContrastAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_ARGUMENT">GET_ARGUMENT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_BOOLEAN">GET_BOOLEAN</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_BOUNDING_RECT">GET_BOUNDING_RECT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_BOUNDS">GET_BOUNDS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_COORDINATES">GET_COORDINATES</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_COUNT">GET_COUNT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_CURSOR_LOC">GET_CURSOR_LOC</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_DATE_AND_TIME">GET_DATE_AND_TIME</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_DIMENSIONS">GET_DIMENSIONS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_DIRECTORY">GET_DIRECTORY</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_DISPLAYED_AREA">GET_DISPLAYED_AREA</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_FILE_LIST">GET_FILE_LIST</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_FONT_LIST">GET_FONT_LIST</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_HEIGHT">GET_HEIGHT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_HISTOGRAM">GET_HISTOGRAM</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_ID">GET_ID</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_IMAGE_INFO">GET_IMAGE_INFO</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_INFO">GET_INFO</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_LINE">GET_LINE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_LIST">GET_LIST</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_LOCATION_AND_SIZE">GET_LOCATION_AND_SIZE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_LUT">GET_LUT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_METADATA">GET_METADATA</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_MIN_AND_MAX">GET_MIN_AND_MAX</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_NUMBER">GET_NUMBER</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_PIXEL">GET_PIXEL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_PIXEL_SIZE">GET_PIXEL_SIZE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_PROFILE">GET_PROFILE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_RAW_STATISTICS">GET_RAW_STATISTICS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_RESULT">GET_RESULT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_RESULT_LABEL">GET_RESULT_LABEL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_RESULT_STRING">GET_RESULT_STRING</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_SLICE_NUMBER">GET_SLICE_NUMBER</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_STATISTICS">GET_STATISTICS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_STRING">GET_STRING</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_STRING_WIDTH">GET_STRING_WIDTH</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_THRESHOLD">GET_THRESHOLD</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_TIME">GET_TIME</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_TITLE">GET_TITLE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_VALUE">GET_VALUE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_VERSION">GET_VERSION</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_VOXEL_SIZE">GET_VOXEL_SIZE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_WIDTH">GET_WIDTH</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GET_ZOOM">GET_ZOOM</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#getActiveChannels--">getActiveChannels()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getActiveWindow--">getActiveWindow()</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Returns the front most window or null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#getAdditionalFunctions--">getAdditionalFunctions()</a></span> - Static method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getAllNonImageWindows--">getAllNonImageWindows()</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Returns an array containing a list of the non-image Frames and Dialogs.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getAllStatistics--">getAllStatistics()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">This method returns complete calibrated statistics for this image or ROI
(with "Limit to threshold"), but it is up to 70 times slower than getStatistics().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#getAngle--">getAngle()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#getAngle--">getAngle()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Returns the angle in degrees between the first two segments of this polyline.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getAngle-int-int-int-int-">getAngle(int, int, int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the angle in degrees between the specified line and a horizontal line.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getAngle--">getAngle()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Overridden by PolygonRoi (angle between first two points), TextRoi (text angle) and Line (line angle).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#getAngle--">getAngle()</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#getAnimate--">getAnimate()</a></span> - Method in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#getAntialiased--">getAntialiased()</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Returns the state of the 'antialiased' instance variable.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getApplet--">getApplet()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns the Applet that created this ImageJ or null if running as an application.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#getArgs--">getArgs()</a></span> - Static method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Returns the command line arguments passed to ImageJ.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getAutoThreshold--">getAutoThreshold()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a pixel value (threshold) that can be used to divide the image into objects
and background.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getAutoThreshold-int:A-">getAutoThreshold(int[])</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">This is a version of getAutoThreshold() that uses a histogram passed as an argument.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getBackgroundColor--">getBackgroundColor()</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#getBackgroundValue--">getBackgroundValue()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Returns the background fill value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getBackgroundValue--">getBackgroundValue()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns the background fill value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getBackgroundValue--">getBackgroundValue()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Always returns 0.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getBackgroundValue--">getBackgroundValue()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the background fill value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#getBackgroundValue--">getBackgroundValue()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Always returns 0.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#getBatchModeImage-int-">getBatchModeImage(int)</a></span> - Static method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#getBatchModeImageCount--">getBatchModeImageCount()</a></span> - Static method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#getBatchModeImageIDs--">getBatchModeImageIDs()</a></span> - Static method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#getBatchModeRoiManager--">getBatchModeRoiManager()</a></span> - Static method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd>
<div class="block">Returns the batch mode RoiManager instance.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getBestIndex-java.awt.Color-">getBestIndex(Color)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Always returns 0 since RGB images do not use LUTs.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getBestIndex-java.awt.Color-">getBestIndex(Color)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the LUT index that's the best match for this color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getBicubicInterpolatedPixel-double-double-ij.process.ImageProcessor-">getBicubicInterpolatedPixel(double, double, ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">This method is from Chapter 16 of "Digital Image Processing:
An Algorithmic Introduction Using Java" by Burger and Burge
(http://www.imagingbook.com/).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getBicubicInterpolatedPixel-double-double-ij.process.ImageProcessor-">getBicubicInterpolatedPixel(double, double, ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">This method is from Chapter 16 of "Digital Image Processing:
An Algorithmic Introduction Using Java" by Burger and Burge
(http://www.imagingbook.com/).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getBitDepth--">getBitDepth()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the bit depth, 8, 16, 24 (RGB) or 32, or 0 if the bit depth
is unknown.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#getBitDepth--">getBitDepth()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Returns the bit depth (8=byte, 16=short, 24=RGB, 32=float).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#getBitDepth--">getBitDepth()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getBitDepth--">getBitDepth()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getBitDepth--">getBitDepth()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getBitDepth--">getBitDepth()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the bit depth, 8, 16, 24 (RGB) or 32.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#getBitDepth--">getBitDepth()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#getBitDepth--">getBitDepth()</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Returns the bit depth (8, 16, 24 or 32), or 0 if the bit depth is not known.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/BitBuffer.html#getBits-int-">getBits(int)</a></span> - Method in class ij.io.<a href="ij/io/BitBuffer.html" title="class in ij.io">BitBuffer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#getBlockIncrement--">getBlockIncrement()</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Colors.html#getBlue-java.lang.String-">getBlue(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Colors.html" title="class in ij.plugin">Colors</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/LookUpTable.html#getBlues--">getBlues()</a></span> - Method in class ij.<a href="ij/LookUpTable.html" title="class in ij">LookUpTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#getBoolean-java.lang.String-boolean-">getBoolean(String, boolean)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Finds a boolean in IJ_Props or IJ_Prefs.txt.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getBoundingRect--">getBoundingRect()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by getBounds()</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#getBounds--">getBounds()</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd>
<div class="block">Return the bounding rectangle of this arrow.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#getBounds--">getBounds()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd>
<div class="block">Return the bounding rectangle of this line.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getBounds--">getBounds()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Return this selection's bounding rectangle.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatPolygon.html#getBounds--">getBounds()</a></span> - Method in class ij.process.<a href="ij/process/FloatPolygon.html" title="class in ij.process">FloatPolygon</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getBrightness--">getBrightness()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns brightness as a FloatProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getBrushSize--">getBrushSize()</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Returns the size of the selection brush tool, or 0 if the brush tool is not enabled.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getBufferedImage--">getBufferedImage()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns a copy of this image as an 8-bit or RGB BufferedImage.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#getBufferedImage--">getBufferedImage()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Returns this image as a BufferedImage.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getBufferedImage--">getBufferedImage()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Returns this image as an 8-bit BufferedImage.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getBufferedImage--">getBufferedImage()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns this image as a BufferedImage.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#getBufferedImage--">getBufferedImage()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Returns this image as an 8-bit BufferedImage .</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/WaitForUserDialog.html#getButton--">getButton()</a></span> - Method in class ij.gui.<a href="ij/gui/WaitForUserDialog.html" title="class in ij.gui">WaitForUserDialog</a></dt>
<dd>
<div class="block">Returns a reference to the 'OK' button</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getButtons--">getButtons()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns references to the "OK" ("Yes"), "Cancel",
and if present, "No" buttons as an array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getButtonSize--">getButtonSize()</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Returns the button width (button spacing).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/LUT.html#getBytes--">getBytes()</a></span> - Method in class ij.process.<a href="ij/process/LUT.html" title="class in ij.process">LUT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getBytesPerPixel--">getBytesPerPixel()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the number of bytes per pixel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#getBytesPerPixel--">getBytesPerPixel()</a></span> - Method in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">Returns the number of bytes used per pixel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getC--">getC()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the current hyperstack channel position.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getCalibration--">getCalibration()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns this image's calibration.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getCalibrationTable--">getCalibrationTable()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the calibration table or null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#getCanvas--">getCanvas()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getCanvas--">getCanvas()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the ImageCanvas being used to
display this image, or null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/WildcardMatch.html#getCaseSensitive--">getCaseSensitive()</a></span> - Method in class ij.util.<a href="ij/util/WildcardMatch.html" title="class in ij.util">WildcardMatch</a></dt>
<dd>
<div class="block">Returns the current state of case sensitivity.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getChannel--">getChannel()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ChannelSplitter.html#getChannel-ij.ImagePlus-int-">getChannel(ImagePlus, int)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/ChannelSplitter.html" title="class in ij.plugin">ChannelSplitter</a></dt>
<dd>
<div class="block">Returns, as an ImageStack, the specified channel, where 'c' must be greater
than zero and less than or equal to the number of channels in the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getChannel-int-">getChannel(int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns the specified plane (1=red, 2=green, 3=blue, 4=alpha) as a byte array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getChannel-int-ij.process.ByteProcessor-">getChannel(int, ByteProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns the specified plane (1=red, 2=green, 3=blue, 4=alpha) as a ByteProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#getChannelColor--">getChannelColor()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#getChannelLut-int-">getChannelLut(int)</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#getChannelLut--">getChannelLut()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#getChannelProcessor--">getChannelProcessor()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getChannelProcessor--">getChannelProcessor()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns a reference to the current ImageProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getCheckboxes--">getCheckboxes()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns the Vector containing the Checkboxes.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getChoices--">getChoices()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns the Vector containing the Choices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getClassLoader--">getClassLoader()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns the class loader ImageJ uses to run plugins or the
system class loader if Menus.getPlugInsPath() returns null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getClipboard--">getClipboard()</a></span> - Static method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the internal clipboard or null if the internal clipboard is empty.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Program.html#getCode--">getCode()</a></span> - Method in class ij.macro.<a href="ij/macro/Program.html" title="class in ij.macro">Program</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getCoefficients--">getCoefficients()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Returns the calibration function coefficients.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ColorChooser.html#getColor--">getColor()</a></span> - Method in class ij.gui.<a href="ij/gui/ColorChooser.html" title="class in ij.gui">ColorChooser</a></dt>
<dd>
<div class="block">Displays a color selection dialog and returns the color selected by the user.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getColor--">getColor()</a></span> - Static method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the default (global) color used for drawing ROI outlines.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getColor--">getColor()</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by getForegroundColor()</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Colors.html#getColor-java.lang.String-java.awt.Color-">getColor(String, Color)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Colors.html" title="class in ij.plugin">Colors</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#getColor-java.lang.String-java.awt.Color-">getColor(String, Color)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Finds a color in IJ_Props or IJ_Prefs.txt.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getColor-int-int-">getColor(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#getColorModel--">getColorModel()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Returns this stack's color model.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/LookUpTable.html#getColorModel--">getColorModel()</a></span> - Method in class ij.<a href="ij/LookUpTable.html" title="class in ij">LookUpTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getColorModel--">getColorModel()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns this processor's color model.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/LUT.html#getColorModel--">getColorModel()</a></span> - Method in class ij.process.<a href="ij/process/LUT.html" title="class in ij.process">LUT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Colors.html#getColorName-java.awt.Color-java.lang.String-">getColorName(Color, String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Colors.html" title="class in ij.plugin">Colors</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Colors.html#getColors-java.lang.String...-">getColors(String...)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Colors.html" title="class in ij.plugin">Colors</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getColumn-int-">getColumn(int)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns a copy of the given column as a float array,
or null if the column is empty.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getColumn-int-int-int:A-int-">getColumn(int, int, int[], int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the pixel values down the column starting at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getColumnAsDoubles-int-">getColumnAsDoubles(int)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns a copy of the given column as a double array,
or null if the column is empty.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getColumnHeading-int-">getColumnHeading(int)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns the heading of the specified column or null if the column is empty.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getColumnHeadings--">getColumnHeadings()</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns a tab or comma delimited string containing the column headings.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#getColumnHeadings--">getColumnHeadings()</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Returns the column headings as a tab-delimited string.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getColumnIndex-java.lang.String-">getColumnIndex(String)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns the index of the first column with the given heading.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Executer.html#getCommand--">getCommand()</a></span> - Static method in class ij.<a href="ij/Executer.html" title="class in ij">Executer</a></dt>
<dd>
<div class="block">Returns the last command executed.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#getCommand--">getCommand()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd>
<div class="block">Returns the name of the command currently being recorded, or null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#getCommandName--">getCommandName()</a></span> - Static method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#getCommandOptions--">getCommandOptions()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd>
<div class="block">Used by GenericDialog to determine if any options have been recorded.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getCommands--">getCommands()</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Returns the hashtable that associates commands with plugins.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#getCompletedMinimizations--">getCompletedMinimizations()</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Get number of minimizations completed (i.e.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#getComplexTransform--">getComplexTransform()</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Converts this FHT to a complex Fourier transform and returns it as a two slice stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getCompositeMode--">getCompositeMode()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the display mode (IJ.COMPOSITE, IJ.COLOR
or IJ.GRAYSCALE) if this is a CompositeImage, otherwise returns -1.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getContainedFloatPoints--">getContainedFloatPoints()</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Returns the points as a FloatPolygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getContainedFloatPoints--">getContainedFloatPoints()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the coordinates of the pixels inside this ROI as a FloatPolygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getContainedPoints--">getContainedPoints()</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Returns the points as an array of Points.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getContainedPoints--">getContainedPoints()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the coordinates of the pixels inside this ROI as an array of Points.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getContourCentroid--">getContourCentroid()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#getControlPanelProperties--">getControlPanelProperties()</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#getConvexHull--">getConvexHull()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Uses the gift wrap algorithm to find the
convex hull and returns it as a Polygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getConvexHull--">getConvexHull()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#getConvexHull--">getConvexHull()</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#getCopy--">getCopy()</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Returns a clone of this FHT.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getCornerDiameter--">getCornerDiameter()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the rounded rectangle corner diameter (pixels).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getCount-int-">getCount(int)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getCount--">getCount()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Returns the ROI count.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getCounter--">getCounter()</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getCounter-int-">getCounter(int)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Returns the counter assocated with the specified point.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getCounter--">getCounter()</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns the current value of the measurement counter.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#getCounter--">getCounter()</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Returns the current measurement count.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getCounterChoices--">getCounterChoices()</a></span> - Static method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getCounterInfo--">getCounterInfo()</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getCounters--">getCounters()</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getCPosition--">getCPosition()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the channel position of this ROI, or zero
if this ROI is not associated with a particular channel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#getCrossLoc--">getCrossLoc()</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getCTable--">getCTable()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Returns the calibration table.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getCurrentColorModel--">getCurrentColorModel()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the current color model, which may have
been modified by setMinAndMax() or setThreshold().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/LogStream.html#getCurrentErrStream--">getCurrentErrStream()</a></span> - Static method in class ij.io.<a href="ij/io/LogStream.html" title="class in ij.io">LogStream</a></dt>
<dd>
<div class="block">Returns the redirection stream for <code>System.err</code> if it exists.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#getCurrentFont--">getCurrentFont()</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Returns the current (instance) font.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getCurrentImage--">getCurrentImage()</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Returns a reference to the active image or null if there isn't one.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/LogStream.html#getCurrentOutStream--">getCurrentOutStream()</a></span> - Static method in class ij.io.<a href="ij/io/LogStream.html" title="class in ij.io">LogStream</a></dt>
<dd>
<div class="block">Returns the redirection stream for <code>System.out</code> if it exists.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getCurrentPasteMode--">getCurrentPasteMode()</a></span> - Static method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the current paste transfer mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getCurrentSlice--">getCurrentSlice()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the current stack index (one-based) or 1 if this is a single image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getCurrentWindow--">getCurrentWindow()</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Returns the active ImageWindow.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getCursorLoc--">getCursorLoc()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Returns the current cursor location in image coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getCustomRoi--">getCustomRoi()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getCValue-int-">getCValue(int)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Converts a raw pixel value to a density calibrated value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getCValue-double-">getCValue(double)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Converts a raw pixel value to a density calibrated value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#getDebugger--">getDebugger()</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#getDebugInfo--">getDebugInfo()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getDebugInfo--">getDebugInfo()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#getDecimalPlaces-double-">getDecimalPlaces(double)</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd>
<div class="block">Returns the number of decimal places needed to display a
number, or -2 if exponential notation should be used.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#getDecimalPlaces-double-double-">getDecimalPlaces(double, double)</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd>
<div class="block">Returns the number of decimal places needed to display two numbers,
or -2 if exponential notation should be used.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getDefault16bitRange--">getDefault16bitRange()</a></span> - Static method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the default 16-bit display range, 0 (auto-scaling), 8, 10, 12, 14, 15 or 16.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getDefaultColorModel--">getDefaultColorModel()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the default grayscale IndexColorModel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getDefaultCrossColor--">getDefaultCrossColor()</a></span> - Static method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Deprecated</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/OpenDialog.html#getDefaultDirectory--">getDefaultDirectory()</a></span> - Static method in class ij.io.<a href="ij/io/OpenDialog.html" title="class in ij.io">OpenDialog</a></dt>
<dd>
<div class="block">Returns the current working directory, which may be null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#getDefaultDirectory--">getDefaultDirectory()</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Returns the default directory, if any, or null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#getDefaultDoubleHeaded--">getDefaultDoubleHeaded()</a></span> - Static method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getDefaultFillColor--">getDefaultFillColor()</a></span> - Static method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#getDefaultFlags--">getDefaultFlags()</a></span> - Static method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">The default flags, taking PlotWindow.noGridLines, PlotWindow.noTicks into account</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getDefaultHeading-int-">getDefaultHeading(int)</a></span> - Static method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#getDefaultHeadSize--">getDefaultHeadSize()</a></span> - Static method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getDefaultMarkerSize--">getDefaultMarkerSize()</a></span> - Static method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span> </div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#getDefaultOutline--">getDefaultOutline()</a></span> - Static method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getDefaultSize--">getDefaultSize()</a></span> - Static method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RectToolOptions.html#getDefaultStrokeColor--">getDefaultStrokeColor()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/RectToolOptions.html" title="class in ij.plugin">RectToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RectToolOptions.html#getDefaultStrokeWidth--">getDefaultStrokeWidth()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/RectToolOptions.html" title="class in ij.plugin">RectToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#getDefaultStyle--">getDefaultStyle()</a></span> - Static method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getDefaultType--">getDefaultType()</a></span> - Static method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#getDefaultWidth--">getDefaultWidth()</a></span> - Static method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#getDescriptionString--">getDescriptionString()</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Returns a string containing information about the specified image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getDimensions--">getDimensions()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the dimensions of this image (width, height, nChannels,
nSlices, nFrames) as a 5 element int array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getDimensions-boolean-">getDimensions(boolean)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getDir-java.lang.String-">getDir(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Alias for getDirectory().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#getDir-java.lang.String-">getDir(String)</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Macro.html#getDir-java.lang.String-">getDir(String)</a></span> - Static method in class ij.<a href="ij/Macro.html" title="class in ij">Macro</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getDirectory-java.lang.String-">getDirectory(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns the path to the home ("user.home"), startup, ImageJ, plugins, macros,
luts, temp, current or image directory if <code>title</code> is "home", "startup",
"imagej", "plugins", "macros", "luts", "temp", "current", "default", "image", otherwise,
displays a dialog and returns the path to the directory selected by the user.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/DirectoryChooser.html#getDirectory--">getDirectory()</a></span> - Method in class ij.io.<a href="ij/io/DirectoryChooser.html" title="class in ij.io">DirectoryChooser</a></dt>
<dd>
<div class="block">Returns the directory selected by the user.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/OpenDialog.html#getDirectory--">getDirectory()</a></span> - Method in class ij.io.<a href="ij/io/OpenDialog.html" title="class in ij.io">OpenDialog</a></dt>
<dd>
<div class="block">Returns the selected directory.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/SaveDialog.html#getDirectory--">getDirectory()</a></span> - Method in class ij.io.<a href="ij/io/SaveDialog.html" title="class in ij.io">SaveDialog</a></dt>
<dd>
<div class="block">Returns the selected directory.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Functions.html#getDirectory--">getDirectory()</a></span> - Method in class ij.macro.<a href="ij/macro/Functions.html" title="class in ij.macro">Functions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#getDirectory--">getDirectory()</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Returns the path to the directory containing the images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getDisplayList--">getDisplayList()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by ImagePlus.getOverlay()</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getDisplayMode--">getDisplayMode()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the display mode (IJ.COMPOSITE, IJ.COLOR
or IJ.GRAYSCALE) if this is a composite color
image, or 0 if it not.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#getDisplayRangeMax--">getDisplayRangeMax()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getDisplayRangeMax--">getDisplayRangeMax()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#getDisplayRangeMin--">getDisplayRangeMin()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getDisplayRangeMin--">getDisplayRangeMin()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageConverter.html#getDoScaling--">getDoScaling()</a></span> - Static method in class ij.process.<a href="ij/process/ImageConverter.html" title="class in ij.process">ImageConverter</a></dt>
<dd>
<div class="block">Returns true if scaling is enabled.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#getDouble-java.lang.String-double-">getDouble(String, double)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Looks up a real number in IJ_Props or IJ_Prefs.txt.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#getDoubleFromArrayList-java.util.ArrayList-">getDoubleFromArrayList(ArrayList)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#getDoubleHeaded--">getDoubleHeaded()</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#getDrawBackgrounds--">getDrawBackgrounds()</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#getDrawingFrame--">getDrawingFrame()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Returns the rectangle where the data are plotted.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#getDrawLabels--">getDrawLabels()</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getDrawLabels--">getDrawLabels()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#getDrawNames--">getDrawNames()</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#getDrawOffset--">getDrawOffset()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#getDrawOffset--">getDrawOffset()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getDrawOffset--">getDrawOffset()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns true if this is a PolygonRoi that supports sub-pixel
resolution and polygons are drawn on zoomed images offset
down and to the right by 0.5 pixels..</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#getDrawStringMode--">getDrawStringMode()</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NewPlugin.html#getEditor--">getEditor()</a></span> - Method in class ij.plugin.<a href="ij/plugin/NewPlugin.html" title="class in ij.plugin">NewPlugin</a></dt>
<dd>
<div class="block">Returns the Editor the newly created macro or plugin was opened in.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getErrorMessage--">getErrorMessage()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns an error message if getNextNumber was unable to convert a
string into a number, otherwise, returns null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getErrorMessage--">getErrorMessage()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns the last error message written by IJ.error() or null if there
was no error since the last time this method was called.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AVI_Reader.html#getErrorText--">getErrorText()</a></span> - Method in class ij.plugin.<a href="ij/plugin/AVI_Reader.html" title="class in ij.plugin">AVI_Reader</a></dt>
<dd>
<div class="block">Returns a description of the error reading the file with <code>makeStack</code> or null if no error</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/WildcardMatch.html#getEscapeChar--">getEscapeChar()</a></span> - Method in class ij.util.<a href="ij/util/WildcardMatch.html" title="class in ij.util">WildcardMatch</a></dt>
<dd>
<div class="block">Returns the character used to escape the wildcard functionality of a
wildcard character.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getExamplesMenu-java.awt.event.ActionListener-">getExamplesMenu(ActionListener)</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroExtension.html#getExtensionFunctions--">getExtensionFunctions()</a></span> - Method in interface ij.macro.<a href="ij/macro/MacroExtension.html" title="interface in ij.macro">MacroExtension</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#getf-int-int-">getf(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#getf-int-">getf(int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getf-int-int-">getf(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getf-int-">getf(int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getf-int-int-">getf(int, int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getf-int-">getf(int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getf-int-int-">getf(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the value of the pixel at (x,y) as a float.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getf-int-">getf(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#getf-int-int-">getf(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#getf-int-">getf(int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getFeretsDiameter--">getFeretsDiameter()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns Feret's diameter, the greatest distance between
any two points along the ROI boundary.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/EllipseRoi.html#getFeretValues--">getFeretValues()</a></span> - Method in class ij.gui.<a href="ij/gui/EllipseRoi.html" title="class in ij.gui">EllipseRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getFeretValues--">getFeretValues()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Caculates "Feret" (maximum caliper width), "FeretAngle"
and "MinFeret" (minimum caliper width), "FeretX" and "FeretY".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#getFeretValues--">getFeretValues()</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Caculates "Feret" (maximum caliper width) and "MinFeret" (minimum caliper width).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#getFileFormat-java.lang.String-">getFileFormat(String)</a></span> - Static method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getFileInfo--">getFileInfo()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns a FileInfo object containing information, including the
pixel array, needed to save this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/ImportDialog.html#getFileInfo--">getFileInfo()</a></span> - Method in class ij.io.<a href="ij/io/ImportDialog.html" title="class in ij.io">ImportDialog</a></dt>
<dd>
<div class="block">Displays the dialog and returns a FileInfo object that can be used to
open the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/OpenDialog.html#getFileName--">getFileName()</a></span> - Method in class ij.io.<a href="ij/io/OpenDialog.html" title="class in ij.io">OpenDialog</a></dt>
<dd>
<div class="block">Returns the selected file name.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/SaveDialog.html#getFileName--">getFileName()</a></span> - Method in class ij.io.<a href="ij/io/SaveDialog.html" title="class in ij.io">SaveDialog</a></dt>
<dd>
<div class="block">Returns the selected file name.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#getFileName--">getFileName()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#getFileName-int-">getFileName(int)</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Returns the file name of the specified slice, were 1<=n<=nslices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getFilePath-java.lang.String-">getFilePath(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Displays an open file dialog and returns the path to the
choosen file, or returns null if the dialog is canceled.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Macro_Runner.html#getFilePath--">getFilePath()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Macro_Runner.html" title="class in ij.plugin">Macro_Runner</a></dt>
<dd>
<div class="block">Returns the file path of the most recently loaded macro or script.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RandomAccessStream.html#getFilePointer--">getFilePointer()</a></span> - Method in class ij.io.<a href="ij/io/RandomAccessStream.html" title="class in ij.io">RandomAccessStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#getFileSeparator--">getFileSeparator()</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Returns the file.separator system property.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#getFileType-java.lang.String-">getFileType(String)</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Attempts to determine the image file type by looking for
'magic numbers' and the file name extension.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getFillColor--">getFillColor()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the fill color used to display this ROI, or null if it is displayed transparently.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FolderOpener.html#getFilteredList-java.lang.String:A-java.lang.String-java.lang.String-">getFilteredList(String[], String, String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/FolderOpener.html" title="class in ij.plugin">FolderOpener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getFit--">getFit()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">returns the code of the fit type of the fit performed</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getFitCode-java.lang.String-">getFitCode(String)</a></span> - Static method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Returns the code for a fit with given name as defined in fitList, or -1 if not found</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getFitGoodness--">getFitGoodness()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Get a measure of "goodness of fit" where 1.0 is best.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#getFixedMax--">getFixedMax()</a></span> - Static method in class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd>
<div class="block">Returns the profile plot y-axis max.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#getFixedMin--">getFixedMin()</a></span> - Static method in class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd>
<div class="block">Returns the profile plot y-axis min.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#getFlags--">getFlags()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Returns the flags that control the axes</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getFloatAngle-double-double-double-double-">getFloatAngle(double, double, double, double)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the angle in degrees between the specified line and a horizontal line.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getFloatArray--">getFloatArray()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a copy of the pixel data as a 2D float
array with dimensions [x=0..width-1][y=0..height-1].</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getFloatBounds--">getFloatBounds()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Return this selection's bounding rectangle.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatPolygon.html#getFloatBounds--">getFloatBounds()</a></span> - Method in class ij.process.<a href="ij/process/FloatPolygon.html" title="class in ij.process">FloatPolygon</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getFloatHeight--">getFloatHeight()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#getFloatPoints--">getFloatPoints()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd>
<div class="block">Returns, as a FloatPolygon, the two points that define this line.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#getFloatPolygon--">getFloatPolygon()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd>
<div class="block">If the width of this line is less than or equal to one, returns the
starting and ending coordinates as a 2-point FloatPolygon, or, if
the width is greater than one, returns an outline of the line as
a 4-point FloatPolygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/OvalRoi.html#getFloatPolygon--">getFloatPolygon()</a></span> - Method in class ij.gui.<a href="ij/gui/OvalRoi.html" title="class in ij.gui">OvalRoi</a></dt>
<dd>
<div class="block">Returns this OvalRoi as a FloatPolygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#getFloatPolygon--">getFloatPolygon()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Returns this polygon or polyline as float arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getFloatPolygon--">getFloatPolygon()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#getFloatPolygon--">getFloatPolygon()</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getFloatWidth--">getFloatWidth()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#getFont--">getFont()</a></span> - Static method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Returns the name of the global (default) font.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getFont--">getFont()</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getFont--">getFont()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the current font.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/FontUtil.html#getFont-java.lang.String-int-float-">getFont(String, int, float)</a></span> - Static method in class ij.util.<a href="ij/util/FontUtil.html" title="class in ij.util">FontUtil</a></dt>
<dd>
<div class="block">Returns a font with the given family name or, if not available, a similar font, e.g.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getFontMetrics--">getFontMetrics()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the current FontMetrics.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getFontSize--">getFontSize()</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Returns the size (in points) used for the fonts in ImageJ menus.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getForegroundColor--">getForegroundColor()</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getFormula--">getFormula()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">returns a String with the formula of the fit function used</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getFrame--">getFrame()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getFrame-java.lang.String-">getFrame(String)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Obsolete; replaced by getWindow().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Animator.html#getFrameRate--">getFrameRate()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Animator.html" title="class in ij.plugin">Animator</a></dt>
<dd>
<div class="block">Returns the current animation speed in frames per second.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getFreeColumn-java.lang.String-">getFreeColumn(String)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Sets the heading of the the first available column and
returns that column's index.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getFrontWindow--">getFrontWindow()</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Obsolete; replaced by getActiveWindow.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getFullVersion--">getFullVersion()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns the ImageJ version and build number as a String, for
example "1.46n05", or 1.46n99 if there is no build number.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getFunction--">getFunction()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Returns the calibration function ID.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#getFunctionValue--">getFunctionValue()</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Get the value of the minimum, i.e.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/GelAnalyzer.html#getGelImage--">getGelImage()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/GelAnalyzer.html" title="class in ij.plugin">GelAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getGlobalCalibration--">getGlobalCalibration()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the system-wide calibration, or null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#getGlobalJustification--">getGlobalJustification()</a></span> - Static method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Returns the global (default) justification (LEFT, CENTER or RIGHT).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Program.html#getGlobals--">getGlobals()</a></span> - Method in class ij.macro.<a href="ij/macro/Program.html" title="class in ij.macro">Program</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Colors.html#getGreen-java.lang.String-">getGreen(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Colors.html" title="class in ij.plugin">Colors</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/LookUpTable.html#getGreens--">getGreens()</a></span> - Method in class ij.<a href="ij/LookUpTable.html" title="class in ij">LookUpTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getHashCode--">getHashCode()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns a hashcode for this Roi that typically changes
if it is moved, even though it is still the same object.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FITS_Writer.html#getHeader-ij.ImagePlus-">getHeader(ImagePlus)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/FITS_Writer.html" title="class in ij.plugin">FITS_Writer</a></dt>
<dd>
<div class="block">Extracts the original FITS header from the Properties object of the
ImagePlus image (or from the current slice label in the case of an ImageStack)
and returns it as an array of String objects representing each card.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getHeadings--">getHeadings()</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns the column headings as an array of Strings.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#getHeadSize--">getHeadSize()</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getHeight--">getHeight()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#getHeight--">getHeight()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AVI_Reader.html#getHeight--">getHeight()</a></span> - Method in class ij.plugin.<a href="ij/plugin/AVI_Reader.html" title="class in ij.plugin">AVI_Reader</a></dt>
<dd>
<div class="block">Returns the image height of the virtual stack</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FileInfoVirtualStack.html#getHeight--">getHeight()</a></span> - Method in class ij.plugin.<a href="ij/plugin/FileInfoVirtualStack.html" title="class in ij.plugin">FileInfoVirtualStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ListVirtualStack.html#getHeight--">getHeight()</a></span> - Method in class ij.plugin.<a href="ij/plugin/ListVirtualStack.html" title="class in ij.plugin">ListVirtualStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getHeight--">getHeight()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the height of this image in pixels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getHideOverlay--">getHideOverlay()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getHigherZoomLevel-double-">getHigherZoomLevel(double)</a></span> - Static method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#getHistogram--">getHistogram()</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#getHistogram--">getHistogram()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#getHistogram-ij.process.ImageProcessor-">getHistogram(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getHistogram--">getHistogram()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getHistogram-ij.process.ImageProcessor-">getHistogram(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getHistogram--">getHistogram()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Returns a 256 bin histogram of the current ROI or of the entire image if there is no ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getHistogram--">getHistogram()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the histogram of the image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getHistogram-int-">getHistogram(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the histogram of the image or ROI, using the specified number of bins.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#getHistogram--">getHistogram()</a></span> - Method in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Returns the histogram as an array of longs.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#getHistogram--">getHistogram()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Returns 65536 bin histogram of the current ROI, which
can be non-rectangular.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getHistogramMax--">getHistogramMax()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the maximum histogram value used for histograms of float images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getHistogramMin--">getHistogramMin()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the minimum histogram value used for histograms of float images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getHistogramSize--">getHistogramSize()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the number of float image histogram bins.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#getHomeDir--">getHomeDir()</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Obsolete, replaced by getImageJDir(), which, unlike this method,
returns a path that ends with File.separator.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getHSB-byte:A-byte:A-byte:A-">getHSB(byte[], byte[], byte[])</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns hue, saturation and brightness in 3 byte arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getHSBStack--">getHSBStack()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns an ImageStack with three 8-bit slices,
representing hue, saturation and brightness</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getID--">getID()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns this image's unique numeric ID.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getIDList--">getIDList()</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Returns a list of the IDs of open images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#getImage--">getImage()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getImage--">getImage()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Returns the ImagePlus object that is associated with this ImageCanvas.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getImage--">getImage()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the ImagePlus associated with this ROI, or null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getImage--">getImage()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns a reference to the active image, or displays an error
message and aborts the plugin or macro if no images are open.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getImage--">getImage()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns this image as a AWT image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#getImage--">getImage()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getImage-int-">getImage(int)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">For IDs less than zero, returns the ImagePlus with the specified ID.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getImage-java.lang.String-">getImage(String)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Returns the first image that has the specified title or null if it is not found.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#getImageArray--">getImageArray()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Returns the stack as an array of 1D pixel arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#getImageArray--">getImageArray()</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Returns null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getImageCount--">getImageCount()</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Returns the number of open images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#getImageFromVector-int-">getImageFromVector(int)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Get ImagePlus from Windows-Vector vwins.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getImageID--">getImageID()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the ID of the image associated with this ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#getImageID--">getImageID()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Info.html#getImageInfo-ij.ImagePlus-ij.process.ImageProcessor-">getImageInfo(ImagePlus, ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Info.html" title="class in ij.plugin.filter">Info</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span></div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ImageInfo.html#getImageInfo-ij.ImagePlus-">getImageInfo(ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ImageInfo.html" title="class in ij.plugin">ImageInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#getImageJDir--">getImageJDir()</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Returns the path, ending in File.separator, to the ImageJ directory.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getImageJMenu-java.lang.String-">getImageJMenu(String)</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Returns the specified ImageJ menu (e.g., "File>New") or null if it is not found.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#getImagePlus--">getImagePlus()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#getImagePlus--">getImagePlus()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Returns the plot as an ImagePlus.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AVI_Reader.html#getImagePlus--">getImagePlus()</a></span> - Method in class ij.plugin.<a href="ij/plugin/AVI_Reader.html" title="class in ij.plugin">AVI_Reader</a></dt>
<dd>
<div class="block">Returns the ImagePlus opened by run().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#getImageSize-ij.ImagePlus-">getImageSize(ImagePlus)</a></span> - Static method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getImageStack--">getImageStack()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the base image stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getImageStackSize--">getImageStackSize()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">If this is a stack, returns the actual number of images in the stack, else returns 1.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#getImagesURL--">getImagesURL()</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Returns the URL of the directory that contains the ImageJ sample images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#getImageTitleFromVector-int-">getImageTitleFromVector(int)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Get the title of image n from Windows-Vector vwins.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getImageTitles--">getImageTitles()</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Returns a list of the titles of all open images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PlugInInterpreter.html#getImports--">getImports()</a></span> - Method in class ij.plugin.<a href="ij/plugin/PlugInInterpreter.html" title="class in ij.plugin">PlugInInterpreter</a></dt>
<dd>
<div class="block">Returns the import statements that are added to the script.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#getIndex-java.lang.String-">getIndex(String)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Returns the index of the ROI with the specified name, or -1 if not found.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getIndexes--">getIndexes()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Returns an array of the selected indexes or all indexes if none are selected.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#getIndexOfImage-ij.ImagePlus-">getIndexOfImage(ImagePlus)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Get index of "image" in vector of synchronized windows, if image is in vector.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getIndexSampleModel--">getIndexSampleModel()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#getInfo--">getInfo()</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/DICOM.html#getInfo-java.lang.String-">getInfo(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/DICOM.html" title="class in ij.plugin">DICOM</a></dt>
<dd>
<div class="block">Returns the DICOM tags of the specified file as a string.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getInfoProperty--">getInfoProperty()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the "Info" property string, or null if it is not found.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#getInitialMagnification--">getInitialMagnification()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getInsets--">getInsets()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#getInsets--">getInsets()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd>
<div class="block">Override Container getInsets() to make room for some text above the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#getInsets--">getInsets()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getInstance--">getInstance()</a></span> - Static method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getInstance--">getInstance()</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Returns a reference to the ImageJ toolbar.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getInstance--">getInstance()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns a reference to the "ImageJ" frame.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#getInstance--">getInstance()</a></span> - Static method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Channels.html#getInstance--">getInstance()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Channels.html" title="class in ij.plugin.frame">Channels</a></dt>
<dd>
<div class="block">Obsolete; always returns null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#getInstance--">getInstance()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#getInstance--">getInstance()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getInstance--">getInstance()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Returns a reference to the ROI Manager, or null if it is not open
and a batch mode macro is not running.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#getInstance--">getInstance()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#getInstance--">getInstance()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getInstance2--">getInstance2()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Returns a reference to the ROI Manager window or to the
macro batch mode RoiManager, or null if neither exists.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/OtherInstance.html#getInt-java.util.Properties-java.lang.String-">getInt(Properties, String)</a></span> - Static method in class ij.<a href="ij/OtherInstance.html" title="class in ij">OtherInstance</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#getInt-java.lang.String-int-">getInt(String, int)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Finds an int in IJ_Props or IJ_Prefs.txt.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getIntArray--">getIntArray()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a copy of the pixel data as a 2D int array with
dimensions [x=0..width-1][y=0..height-1].</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getInterpolate--">getInterpolate()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the value of the interpolate field.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#getInterpolatedPixel-double-double-">getInterpolatedPixel(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Uses the current interpolation method (BILINEAR or BICUBIC)
to calculate the pixel value at real coordinates (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getInterpolatedPixel-double-double-">getInterpolatedPixel(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Calls getPixelValue(x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getInterpolatedPixel-double-double-">getInterpolatedPixel(double, double)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Uses the current interpolation method (BILINEAR or BICUBIC)
to calculate the pixel value at real coordinates (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getInterpolatedPixel-double-double-">getInterpolatedPixel(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Uses the current interpolation method (bilinear or bicubic)
to find the pixel value at real coordinates (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#getInterpolatedPixel-double-double-">getInterpolatedPixel(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Uses the current interpolation method (BILINEAR or BICUBIC)
to calculate the pixel value at real coordinates (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#getInterpolatedPolygon-double-boolean-">getInterpolatedPolygon(double, boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getInterpolatedPolygon--">getInterpolatedPolygon()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns, as a FloatPolygon, an interpolated version
of this selection that has points spaced 1.0 pixel apart.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getInterpolatedPolygon-double-boolean-">getInterpolatedPolygon(double, boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns, as a FloatPolygon, an interpolated version of
this selection with points spaced 'interval' pixels apart.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getInterpolatedPolygon-ij.process.FloatPolygon-double-boolean-">getInterpolatedPolygon(FloatPolygon, double, boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns, as a FloatPolygon, an interpolated version of this selection
with points spaced abs('interval') pixels apart.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getInterpolatedRGBPixel-double-double-">getInterpolatedRGBPixel(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Uses bilinear interpolation to find the pixel value at real coordinates (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getInterpolatedValue-double-double-">getInterpolatedValue(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Uses bilinear interpolation to find the pixel value at real coordinates (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getInterpolationMethod--">getInterpolationMethod()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the current interpolation method (NONE, BILINEAR or BICUBIC).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getInterpolationMethods--">getInterpolationMethods()</a></span> - Static method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getInvertY--">getInvertY()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Returns the 'invertY' flag.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getIterations--">getIterations()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Get number of iterations performed.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#getIterations--">getIterations()</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Get number of iterations performed (includes all restarts).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getJarFileForMenuEntry-java.lang.String-">getJarFileForMenuEntry(String)</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#getJpegQuality--">getJpegQuality()</a></span> - Static method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Returns the current JPEG quality setting (0-100).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#getJSPrefix-java.lang.String-">getJSPrefix(String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#getJustification--">getJustification()</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Returns the value of the 'justification' instance variable (LEFT, CENTER or RIGHT).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ColorThresholder.html#getLab-ij.process.ImageProcessor-byte:A-byte:A-byte:A-">getLab(ImageProcessor, byte[], byte[], byte[])</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/ColorThresholder.html" title="class in ij.plugin.frame">ColorThresholder</a></dt>
<dd>
<div class="block">Returns Lab in 3 byte arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getLabel-int-">getLabel(int)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns the label of the specified row.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#getLabelColor--">getLabelColor()</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#getLabelFont--">getLabelFont()</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#getLastBatchModeImage--">getLastBatchModeImage()</a></span> - Static method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getLastColumn--">getLastColumn()</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns the index of the last used column, or -1 if no columns are used.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/OpenDialog.html#getLastDirectory--">getLastDirectory()</a></span> - Static method in class ij.io.<a href="ij/io/OpenDialog.html" title="class in ij.io">OpenDialog</a></dt>
<dd>
<div class="block">Returns the path to the last directory opened by the user
using a file open or file save dialog, or using drag and drop.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/ImportDialog.html#getLastFileInfo--">getLastFileInfo()</a></span> - Static method in class ij.io.<a href="ij/io/ImportDialog.html" title="class in ij.io">ImportDialog</a></dt>
<dd>
<div class="block">Returns the FileInfo object used to import the last raw image,
or null if a raw image has not been imported.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/OpenDialog.html#getLastName--">getLastName()</a></span> - Static method in class ij.io.<a href="ij/io/OpenDialog.html" title="class in ij.io">OpenDialog</a></dt>
<dd>
<div class="block">Returns the name of the last file opened by the user
using a file open or file save dialog, or using drag and drop.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/EllipseRoi.html#getLength--">getLength()</a></span> - Method in class ij.gui.<a href="ij/gui/EllipseRoi.html" title="class in ij.gui">EllipseRoi</a></dt>
<dd>
<div class="block">Returns the perimeter of this ellipse.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#getLength--">getLength()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd>
<div class="block">Returns the length of this line.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/OvalRoi.html#getLength--">getLength()</a></span> - Method in class ij.gui.<a href="ij/gui/OvalRoi.html" title="class in ij.gui">OvalRoi</a></dt>
<dd>
<div class="block">Returns the perimeter length.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#getLength--">getLength()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Returns the perimeter (for ROIs) or length (for lines).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getLength--">getLength()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the perimeter length.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#getLength--">getLength()</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Returns the perimeter if this ShapeRoi can be decomposed
into simple ROIs, otherwise returns zero.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatPolygon.html#getLength-boolean-">getLength(boolean)</a></span> - Method in class ij.process.<a href="ij/process/FloatPolygon.html" title="class in ij.process">FloatPolygon</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#getLimits--">getLimits()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Returns the current limits as an array xMin, xMax, yMin, yMax.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getLine-double-double-double-double-">getLine(double, double, double, double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns an array containing the pixel values along the
line starting at (x1,y1) and ending at (x2,y2).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#getLine-int-">getLine(int)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Returns the specified line as a string.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#getLineCount--">getLineCount()</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Returns the number of lines of text in this TextPanel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#getLineNumber--">getLineNumber()</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getLineWidth--">getLineWidth()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the current line width.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getList--">getList()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span> </div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Executer.html#getListenerCount--">getListenerCount()</a></span> - Static method in class ij.<a href="ij/Executer.html" title="class in ij">Executer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#getLoadRate-double-ij.ImagePlus-">getLoadRate(double, ImagePlus)</a></span> - Static method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getLocalCalibration--">getLocalCalibration()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns this image's local calibration, ignoring
the "Global" calibration flag.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#getLocation-java.lang.String-">getLocation(String)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Uses the keyword <code>key</code> to retrieve a location
from the preferences file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getLocationAsString-int-int-">getLocationAsString(int, int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Converts the current cursor location to a string.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getLog--">getLog()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns the contents of the Log window or null if the Log window is not open.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RandomAccessStream.html#getLongFilePointer--">getLongFilePointer()</a></span> - Method in class ij.io.<a href="ij/io/RandomAccessStream.html" title="class in ij.io">RandomAccessStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getLowerZoomLevel-double-">getLowerZoomLevel(double)</a></span> - Static method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getLut--">getLut()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#getLuts--">getLuts()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getLuts--">getLuts()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns, as an array of strings, a list of the LUTs in the Image/Lookup Tables menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getLuts--">getLuts()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns an array containing the lookup tables used by this image,
one per channel, or an empty array if this is an RGB image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getLutUpdateMode--">getLutUpdateMode()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the LUT update mode, which can be RED_LUT, BLACK_AND_WHITE_LUT,
OVER_UNDER_LUT or NO_LUT_UPDATE.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#getMacroCode-java.lang.String-ij.ImagePlus-">getMacroCode(String, ImagePlus)</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Used by the Recorder for recording the text tool.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getMacroCount--">getMacroCount()</a></span> - Method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#getMacroCount--">getMacroCount()</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/MacroToolRunner.html#getMacroCount--">getMacroCount()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/MacroToolRunner.html" title="class in ij.plugin.tool">MacroToolRunner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/MacroToolRunner.html#getMacroProgram--">getMacroProgram()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/MacroToolRunner.html" title="class in ij.plugin.tool">MacroToolRunner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PlugInTool.html#getMacroProgram--">getMacroProgram()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool">PlugInTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getMacroShortcuts--">getMacroShortcuts()</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Returns the hashtable that associates keyboard shortcuts with macros.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getMacrosMenu--">getMacrosMenu()</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getMacrosPath--">getMacrosPath()</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Returns the path to the macros directory or
null if the macros directory was not found.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getMagnification--">getMagnification()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getMagnification--">getMagnification()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/LookUpTable.html#getMapSize--">getMapSize()</a></span> - Method in class ij.<a href="ij/LookUpTable.html" title="class in ij">LookUpTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#getMask--">getMask()</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/OvalRoi.html#getMask--">getMask()</a></span> - Method in class ij.gui.<a href="ij/gui/OvalRoi.html" title="class in ij.gui">OvalRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getMask--">getMask()</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#getMask--">getMask()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getMask--">getMask()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Always returns null for rectangular Roi's</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#getMask--">getMask()</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Returns this ROI's mask pixels as a ByteProcessor with pixels "in" the mask
set to white (255) and pixels "outside" the mask set to black (0).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getMask--">getMask()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">For images with irregular ROIs, returns a byte mask, otherwise, returns
null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getMask--">getMask()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">For images with irregular ROIs, returns a mask, otherwise,
returns null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/PolygonFiller.html#getMask-int-int-">getMask(int, int)</a></span> - Method in class ij.process.<a href="ij/process/PolygonFiller.html" title="class in ij.process">PolygonFiller</a></dt>
<dd>
<div class="block">Returns a byte mask containing a filled version of the polygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getMaskArray--">getMaskArray()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a reference to the mask pixel array, or null if there is no mask.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#getMatchingCoords-ij.gui.ImageCanvas-ij.gui.ImageCanvas-int-int-">getMatchingCoords(ImageCanvas, ImageCanvas, int, int)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Get Screen Coordinates for ImageCanvas ic matching
the OffScreen Coordinates of the current ImageCanvas.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#getMax--">getMax()</a></span> - Method in class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd>
<div class="block">Returns the calculated maximum value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getMax-double:A-">getMax(double[])</a></span> - Static method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Gets index of highest value in an array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#getMax--">getMax()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Returns the largest displayed pixel value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getMax--">getMax()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns the largest displayed pixel value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getMax--">getMax()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Returns the largest displayed pixel value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getMax--">getMax()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the largest displayed pixel value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#getMax--">getMax()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Returns the largest displayed pixel value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#getMaxima-ij.process.ImageProcessor-double-boolean-">getMaxima(ImageProcessor, double, boolean)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd>
<div class="block">Finds the image maxima and returns them as a Polygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#getMaximum--">getMaximum()</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/ArrayUtil.html#getMaximum--">getMaximum()</a></span> - Method in class ij.util.<a href="ij/util/ArrayUtil.html" title="class in ij.util">ArrayUtil</a></dt>
<dd>
<div class="block">The maximum value</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#getMaximumBounds--">getMaximumBounds()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getMaxIterations--">getMaxIterations()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Get maximum number of iterations allowed (sum of iteration count for all restarts)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#getMaxIterations--">getMaxIterations()</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Get maximum number of iterations allowed.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#getMaxRestarts--">getMaxRestarts()</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Get maximum number of minimization restarts to do</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getMaxThreshold--">getMaxThreshold()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the upper threshold level.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GUI.html#getMaxWindowBounds--">getMaxWindowBounds()</a></span> - Static method in class ij.gui.<a href="ij/gui/GUI.html" title="class in ij.gui">GUI</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/ArrayUtil.html#getMean--">getMean()</a></span> - Method in class ij.util.<a href="ij/util/ArrayUtil.html" title="class in ij.util">ArrayUtil</a></dt>
<dd>
<div class="block">Average value</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#getMeasurements--">getMeasurements()</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Memory.html#getMemorySetting--">getMemorySetting()</a></span> - Method in class ij.plugin.<a href="ij/plugin/Memory.html" title="class in ij.plugin">Memory</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getMenuBar--">getMenuBar()</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Program.html#getMenus--">getMenus()</a></span> - Method in class ij.macro.<a href="ij/macro/Program.html" title="class in ij.macro">Program</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getMessage--">getMessage()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns a reference to the Label or MultiLineLabel created by the
last addMessage() call, or null if addMessage() was not called.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#getMethod--">getMethod()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd>
<div class="block">Returns the current thresholding method ("Default", "Huang", etc).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/AutoThresholder.html#getMethods--">getMethods()</a></span> - Static method in class ij.process.<a href="ij/process/AutoThresholder.html" title="class in ij.process">AutoThresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#getMin--">getMin()</a></span> - Method in class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd>
<div class="block">Returns the calculated minimum value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#getMin--">getMin()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Returns the smallest displayed pixel value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getMin--">getMin()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns the smallest displayed pixel value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getMin--">getMin()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Returns the smallest displayed pixel value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getMin--">getMin()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the smallest displayed pixel value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#getMin--">getMin()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Returns the smallest displayed pixel value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getMinimizer--">getMinimizer()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Returns a reference to the Minimizer used, for accessing Minimizer methods directly.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#getMinimum--">getMinimum()</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/ArrayUtil.html#getMinimum--">getMinimum()</a></span> - Method in class ij.util.<a href="ij/util/ArrayUtil.html" title="class in ij.util">ArrayUtil</a></dt>
<dd>
<div class="block">The minimum value</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImagePanel.html#getMinimumSize--">getMinimumSize()</a></span> - Method in class ij.gui.<a href="ij/gui/ImagePanel.html" title="class in ij.gui">ImagePanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MultiLineLabel.html#getMinimumSize--">getMinimumSize()</a></span> - Method in class ij.gui.<a href="ij/gui/MultiLineLabel.html" title="class in ij.gui">MultiLineLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#getMinimumSize--">getMinimumSize()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">The minimum plot size including borders, in pixels (at scale=1)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#getMinimumSize--">getMinimumSize()</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getMinimumSize--">getMinimumSize()</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/TrimmedButton.html#getMinimumSize--">getMinimumSize()</a></span> - Method in class ij.gui.<a href="ij/gui/TrimmedButton.html" title="class in ij.gui">TrimmedButton</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#getMinMax-double:A-">getMinMax(double[])</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#getMinMax-float:A-">getMinMax(float[])</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getMinThreshold--">getMinThreshold()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the lower threshold level.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#getMode--">getMode()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#getMode--">getMode()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd>
<div class="block">Returns the current mode ("Red","B&W" or"Over/Under").</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/WandToolOptions.html#getMode--">getMode()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/WandToolOptions.html" title="class in ij.plugin">WandToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#getModeAsString--">getModeAsString()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getModifiers--">getModifiers()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Returns the mouse event modifiers.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/WildcardMatch.html#getMultipleWildcardChar--">getMultipleWildcardChar()</a></span> - Method in class ij.util.<a href="ij/util/WildcardMatch.html" title="class in ij.util">WildcardMatch</a></dt>
<dd>
<div class="block">Returns the character used to specify any amount of characters.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getMultiPointMode--">getMultiPointMode()</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Returns 'true' if the multi-point tool is enabled.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getName--">getName()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the name of this ROI, or null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#getName-java.lang.String-">getName(String)</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Macro.html#getName-java.lang.String-">getName(String)</a></span> - Static method in class ij.<a href="ij/Macro.html" title="class in ij">Macro</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getName--">getName()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">returns the name of the fit function of the fit performed</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getName-int-">getName(int)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Returns the name of the ROI with the specified index,
or null if the index is out of range.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getName-java.lang.String-">getName(String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Returns the name of the ROI with the specified index.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PlugInInterpreter.html#getName--">getName()</a></span> - Method in class ij.plugin.<a href="ij/plugin/PlugInInterpreter.html" title="class in ij.plugin">PlugInInterpreter</a></dt>
<dd>
<div class="block">Returns the name of this PlugInInterpreter.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/TextReader.html#getName--">getName()</a></span> - Method in class ij.plugin.<a href="ij/plugin/TextReader.html" title="class in ij.plugin">TextReader</a></dt>
<dd>
<div class="block">Returns the file name.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/ThreadUtil.html#getNbCpus--">getNbCpus()</a></span> - Static method in class ij.util.<a href="ij/util/ThreadUtil.html" title="class in ij.util">ThreadUtil</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getNChannels--">getNChannels()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the number of channels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getNChannels--">getNChannels()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns the number of color channels of the image, i.e., 3.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getNChannels--">getNChannels()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the number of color channels in the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#getNCoordinates--">getNCoordinates()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Returns the number of points that define this PolygonRoi.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getNDimensions--">getNDimensions()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the number of dimensions (2, 3, 4 or 5).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getNeighborhood-int-int-double:A:A-">getNeighborhood(int, int, double[][])</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Experimental</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getNextBoolean--">getNextBoolean()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns the state of the next checkbox.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getNextChoice--">getNextChoice()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns the selected item in the next popup menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getNextChoiceIndex--">getNextChoiceIndex()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns the index of the selected item in the next popup menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getNextNumber--">getNextNumber()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns the contents of the next numeric field,
or NaN if the field does not contain a number.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getNextRadioButton--">getNextRadioButton()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns the selected item in the next radio button group.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getNextString--">getNextString()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns the contents of the next text field.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getNextText--">getNextText()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns the contents of the next textarea.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getNFrames--">getNFrames()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the number of frames (time-points).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getNonImageTitles--">getNonImageTitles()</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Returns an array containing the titles of non-image Frames and Dialogs.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getNonImageWindows--">getNonImageWindows()</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Returns an array containing a list of the non-image Frames.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#getNonSplineCoordinates--">getNonSplineCoordinates()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#getNonSplineFloatPolygon--">getNonSplineFloatPolygon()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#getNScrollbars--">getNScrollbars()</a></span> - Method in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getNSlices--">getNSlices()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the image depth (number of z-slices).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getNthImageID-int-">getNthImageID(int)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Returns the ID of the Nth open image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getNumber-java.lang.String-double-">getNumber(String, double)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Allows the user to enter a number in a dialog box.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getNumericFields--">getNumericFields()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns the Vector containing the numeric TextFields.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getNumericProperty-java.lang.String-">getNumericProperty(String)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the numeric value from the "Info" property string
associated with 'key', or NaN if the key is not found or the
value associated with the key is not numeric.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getNumParams--">getNumParams()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Get number of parameters for current fit formula
Do not use before 'doFit', because the fit function would be undefined.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getNumParams-int-">getNumParams(int)</a></span> - Static method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Returns the number of parameters for a given fit type, except for the 'custom' fit,
where the number of parameters is given by the equation: see getNumParams(String)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getNumParams-java.lang.String-">getNumParams(String)</a></span> - Static method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Returns the number of parameters for a custom equation given as a macro String,
like "y = a + b*x + c*x*x" .</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getNumTools--">getNumTools()</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#getOffset--">getOffset()</a></span> - Method in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">Returns the offset as a long.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageRoi.html#getOpacity--">getOpacity()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageRoi.html" title="class in ij.gui">ImageRoi</a></dt>
<dd>
<div class="block">Returns the current opacity.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getOpenAsHyperStack--">getOpenAsHyperStack()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getOpenRecentMenu--">getOpenRecentMenu()</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#getOpenUsingPlugins--">getOpenUsingPlugins()</a></span> - Static method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Returns the state of the openUsingPlugins flag.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Macro.html#getOptions--">getOptions()</a></span> - Static method in class ij.<a href="ij/Macro.html" title="class in ij">Macro</a></dt>
<dd>
<div class="block">If a command started using run(name, options) is running,
and the current thread is the same thread,
returns the options string, otherwise, returns null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#getOrCreateResultsTable--">getOrCreateResultsTable()</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Returns the ResultsTable associated with this TextPanel, or
attempts to create one and returns the created table.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#getOrientation--">getOrientation()</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getOriginalFileInfo--">getOriginalFileInfo()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the FileInfo object that was used to open this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#getOutline--">getOutline()</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#getOutputImage--">getOutputImage()</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Returns the "Outlines", "Masks", "Elipses" or "Count Masks" image,
or null if "Nothing" is selected in the "Show:" menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#getOutputType--">getOutputType()</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">Returns the current output type (BYTE_OVERWRITE, BYTE, SHORT or FLOAT)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getOvalToolType--">getOvalToolType()</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Returns the oval tool type (OVAL_ROI, ELLIPSE_ROI or BRUSH_ROI).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getOverlay--">getOverlay()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Use ImagePlus.getOverlay().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getOverlay--">getOverlay()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the current overly, or null if this image does not have an overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#getOverlay-ij.ImagePlus-">getOverlay(ImagePlus)</a></span> - Static method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getOverlay--">getOverlay()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getPaintPending--">getPaintPending()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/EllipseRoi.html#getParams--">getParams()</a></span> - Method in class ij.gui.<a href="ij/gui/EllipseRoi.html" title="class in ij.gui">EllipseRoi</a></dt>
<dd>
<div class="block">Returns x1, y1, x2, y2 and aspectRatio as a 5 element array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/RotatedRectRoi.html#getParams--">getParams()</a></span> - Method in class ij.gui.<a href="ij/gui/RotatedRectRoi.html" title="class in ij.gui">RotatedRectRoi</a></dt>
<dd>
<div class="block">Returns x1, y1, x2, y2 and width as a 5 element array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getParams--">getParams()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Get the result of fitting, i.e.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#getParams--">getParams()</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Get the result, i.e., the set of parameter values (i.e., variable values)
from the best corner of the simplex.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getPasteMode--">getPasteMode()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the current paste transfer mode, or NOT_PASTING (-1)
if no paste operation is in progress.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/OpenDialog.html#getPath--">getPath()</a></span> - Method in class ij.io.<a href="ij/io/OpenDialog.html" title="class in ij.io">OpenDialog</a></dt>
<dd>
<div class="block">Returns the selected file path or null if the dialog was canceled.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getPixel-int-int-">getPixel(int, int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the pixel value at (x,y) as a 4 element array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#getPixel-int-int-">getPixel(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getPixel-int-int-">getPixel(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getPixel-int-int-int:A-">getPixel(int, int, int[])</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns the 3 samples for the pixel at (x,y) in an array of int.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getPixel-int-int-">getPixel(int, int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Returns a pixel value that must be converted using
Float.intBitsToFloat().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getPixel-int-int-int:A-">getPixel(int, int, int[])</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Returns the value of the pixel at (x,y) in a
one element int array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getPixel-int-int-">getPixel(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the value of the pixel at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getPixel-int-int-int:A-">getPixel(int, int, int[])</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the samples for the pixel at (x,y) in an int array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#getPixel-int-int-">getPixel(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getPixelCount--">getPixelCount()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#getPixelInterpolated-double-double-">getPixelInterpolated(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getPixelInterpolated-double-double-">getPixelInterpolated(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getPixelInterpolated-double-double-">getPixelInterpolated(double, double)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getPixelInterpolated-double-double-">getPixelInterpolated(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Uses the current interpolation method to find the pixel value at real coordinates (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#getPixelInterpolated-double-double-">getPixelInterpolated(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#getPixels--">getPixels()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd>
<div class="block">Returns the pixel values along this line.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#getPixels-int-">getPixels(int)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Returns the pixel array for the specified slice, were 1<=n<=nslices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#getPixels--">getPixels()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Returns a reference to the byte array containing this image's
pixel data.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getPixels--">getPixels()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns a reference to the int array containing
this image's pixel data.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getPixels--">getPixels()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Returns a reference to the float array containing
this image's pixel data.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getPixels--">getPixels()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a reference to this image's pixel array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#getPixels--">getPixels()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Returns a reference to the short array containing this image's
pixel data.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#getPixels-int-">getPixels(int)</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Returns the pixel array for the specified slice, were 1<=n<=nslices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#getPixelsCopy--">getPixelsCopy()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Returns a copy of the pixel data.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getPixelsCopy--">getPixelsCopy()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns a copy of the pixel data.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getPixelsCopy--">getPixelsCopy()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Returns a copy of the pixel data.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getPixelsCopy--">getPixelsCopy()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a copy of the pixel data.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#getPixelsCopy--">getPixelsCopy()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Returns a copy of the pixel data.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#getPixelValue-int-int-">getPixelValue(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getPixelValue-int-int-">getPixelValue(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Converts the specified pixel to grayscale using the
formula g=(r+g+b)/3 and returns it as a float.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getPixelValue-int-int-">getPixelValue(int, int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Returns the value of the pixel at (x,y) as a float.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getPixelValue-int-int-">getPixelValue(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the value of the pixel at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#getPixelValue-int-int-">getPixelValue(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Returns the value of the pixel at (x,y) as a float.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#getPlot--">getPlot()</a></span> - Method in class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">Returns the Plot displayed in this canvas</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotMaker.html#getPlot--">getPlot()</a></span> - Method in interface ij.gui.<a href="ij/gui/PlotMaker.html" title="interface in ij.gui">PlotMaker</a></dt>
<dd>
<div class="block">Returns a profile plot.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#getPlot--">getPlot()</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Returns the Plot associated with this PlotWindow.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#getPlot--">getPlot()</a></span> - Method in class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Profiler.html#getPlot--">getPlot()</a></span> - Method in class ij.plugin.<a href="ij/plugin/Profiler.html" title="class in ij.plugin">Profiler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZAxisProfiler.html#getPlot-ij.ImagePlus-">getPlot(ImagePlus)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/ZAxisProfiler.html" title="class in ij.plugin">ZAxisProfiler</a></dt>
<dd>
<div class="block">Returns a Plot of the selection mean gray value versus slice number.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZAxisProfiler.html#getPlot-ij.ImagePlus-java.lang.String-">getPlot(ImagePlus, String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/ZAxisProfiler.html" title="class in ij.plugin">ZAxisProfiler</a></dt>
<dd>
<div class="block">Returns a Plot of the selection mean versus slice number for the
specified hyperstack, where 'options' can be "time" or "z-axis".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZAxisProfiler.html#getPlot--">getPlot()</a></span> - Method in class ij.plugin.<a href="ij/plugin/ZAxisProfiler.html" title="class in ij.plugin">ZAxisProfiler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#getPlotObjectDesignations--">getPlotObjectDesignations()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Get an array with human-readable designations of the non-hidden PlotObjects (curves, labels, ...)
in the sequence they are plotted (i.e., foreground last).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#getPlotObjectStyles-int-">getPlotObjectStyles(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Get the style of the i-th PlotObject (curve, label, ...) in the sequence
they are plotted (i.e., foreground last), as String with comma delimiters:
Main Color, Secondary Color (or "none"), Line Width [, Symbol shape for XY_DATA] [,hidden]</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#getPlotSize--">getPlotSize()</a></span> - Method in class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd>
<div class="block">Returns the size of the plot that createWindow() creates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getPluginCount--">getPluginCount()</a></span> - Method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getPlugins--">getPlugins()</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Returns a list of the plugins in the plugins menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getPlugInsPath--">getPlugInsPath()</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Returns the path to the user plugins directory or
null if the plugins directory was not found.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getPlugInTool--">getPlugInTool()</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getPointPosition-int-">getPointPosition(int)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#getPoints--">getPoints()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd>
<div class="block">Returns, as a Polygon, the two points that define this line.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getPointType--">getPointType()</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Returns the point type (0=hybrid, 1=crosshair, 2=dot, 3=circle).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#getPolygon--">getPolygon()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd>
<div class="block">If the width of this line is less than or equal to one, returns the
starting and ending coordinates as a 2-point Polygon, or, if
the width is greater than one, returns an outline of the line as
a 4-point Polygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/OvalRoi.html#getPolygon--">getPolygon()</a></span> - Method in class ij.gui.<a href="ij/gui/OvalRoi.html" title="class in ij.gui">OvalRoi</a></dt>
<dd>
<div class="block">Returns this OvalRoi as a Polygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#getPolygon--">getPolygon()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Returns this PolygonRoi as a Polygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getPolygon--">getPolygon()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the outline of this selection as a Polygon, or
null if this is a straight line selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#getPolygon--">getPolygon()</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getPopupMenu--">getPopupMenu()</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#getPort--">getPort()</a></span> - Static method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Returns the port that ImageJ checks on startup to see if another instance is running.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getPosition--">getPosition()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the stack position (image number) of this ROI, or
zero if the ROI is not associated with a particular stack image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#getPowerSpectrum--">getPowerSpectrum()</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Returns an 8-bit power spectrum, log-scaled to 1-254.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#getPrecision--">getPrecision()</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Returns the number of digits displayed to the right of decimal point.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#getPreferredLocation--">getPreferredLocation()</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getPreferredSize--">getPreferredSize()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImagePanel.html#getPreferredSize--">getPreferredSize()</a></span> - Method in class ij.gui.<a href="ij/gui/ImagePanel.html" title="class in ij.gui">ImagePanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MultiLineLabel.html#getPreferredSize--">getPreferredSize()</a></span> - Method in class ij.gui.<a href="ij/gui/MultiLineLabel.html" title="class in ij.gui">MultiLineLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProgressBar.html#getPreferredSize--">getPreferredSize()</a></span> - Method in class ij.gui.<a href="ij/gui/ProgressBar.html" title="class in ij.gui">ProgressBar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#getPreferredSize--">getPreferredSize()</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getPreferredSize--">getPreferredSize()</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/TrimmedButton.html#getPreferredSize--">getPreferredSize()</a></span> - Method in class ij.gui.<a href="ij/gui/TrimmedButton.html" title="class in ij.gui">TrimmedButton</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#getPrefsDir--">getPrefsDir()</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Returns the path to the directory where the
preferences file (IJPrefs.txt) is saved.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/OtherInstance.html#getPrefsDirectory--">getPrefsDirectory()</a></span> - Static method in class ij.<a href="ij/OtherInstance.html" title="class in ij">OtherInstance</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getPreviewCheckbox--">getPreviewCheckbox()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns a reference to the Preview checkbox.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#getProcessor-int-">getProcessor(int)</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageRoi.html#getProcessor--">getProcessor()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageRoi.html" title="class in ij.gui">ImageRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#getProcessor--">getProcessor()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Draws the plot (if not done before) in an ImageProcessor and returns the ImageProcessor with the plot.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getProcessor--">getProcessor()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns the active image or stack slice as an ImageProcessor, or displays
an error message and aborts the plugin or macro if no images are open.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getProcessor--">getProcessor()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns a reference to the current ImageProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#getProcessor-int-">getProcessor(int)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Returns an ImageProcessor for the specified slice,
were 1<=n<=nslices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AVI_Reader.html#getProcessor-int-">getProcessor(int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/AVI_Reader.html" title="class in ij.plugin">AVI_Reader</a></dt>
<dd>
<div class="block">Returns an ImageProcessor for the specified slice of this virtual stack (if it is one)
where 1<=n<=nslices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FileInfoVirtualStack.html#getProcessor-int-">getProcessor(int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/FileInfoVirtualStack.html" title="class in ij.plugin">FileInfoVirtualStack</a></dt>
<dd>
<div class="block">Returns an ImageProcessor for the specified image,
were 1<=n<=nImages.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ListVirtualStack.html#getProcessor-int-">getProcessor(int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ListVirtualStack.html" title="class in ij.plugin">ListVirtualStack</a></dt>
<dd>
<div class="block">Returns an ImageProcessor for the specified slice,
were 1<=n<=nslices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#getProcessor-int-">getProcessor(int)</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Returns an ImageProcessor for the specified slice,
were 1<=n<=nslices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#getProfile--">getProfile()</a></span> - Method in class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd>
<div class="block">Returns the profile plot data.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#getProgram--">getProgram()</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#getProgressBar--">getProgressBar()</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getProgressIncrement-int-int-">getProgressIncrement(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#getProjection--">getProjection()</a></span> - Method in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd>
<div class="block">Retrieve results of most recent projection operation.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getProp-java.lang.String-">getProp(String)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span> </div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getProperties--">getProperties()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getProperties--">getProperties()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns this image's Properties.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#getProperties--">getProperties()</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Returns the ImagePlus Properties assoctated with the current slice, or null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getProperty-java.lang.String-">getProperty(String)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getProperty-java.lang.String-">getProperty(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns the object in IJ.properties associated
with 'key', or null if 'key' is not found.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getProperty-java.lang.String-">getProperty(String)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the property associated with 'key', or null if it is not found.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getPropertyCount--">getPropertyCount()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getPrototypeOverlay--">getPrototypeOverlay()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/JpegWriter.html#getQuality--">getQuality()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/JpegWriter.html" title="class in ij.plugin">JpegWriter</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by FileSaver.getJpegQuality()</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getRadioButtonGroups--">getRadioButtonGroups()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns the Vector that contains the RadioButtonGroups.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getRawInstance--">getRawInstance()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#getRawLength--">getRawLength()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd>
<div class="block">Returns the length of this line in pixels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getRawStatistics--">getRawStatistics()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#getRawType-int-">getRawType(int)</a></span> - Static method in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getRawValue-double-">getRawValue(double)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Converts a density calibrated value into a raw pixel value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getRawX-double-">getRawX(double)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Converts a x-coordinate in physical units to pixels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getRawY-double-">getRawY(double)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Converts a y-coodinate in physical units to pixels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getRawY-double-int-">getRawY(double, int)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Converts a y-coodinate in physical units to pixels,
taking into account the 'invertY' flag.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getRectToolType--">getRectToolType()</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Returns the rectangle tool type (RECT_ROI, ROUNDED_RECT_ROI or ROTATED_RECT_ROI).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Colors.html#getRed-java.lang.String-">getRed(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Colors.html" title="class in ij.plugin">Colors</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#getRedirectImage-ij.ImagePlus-">getRedirectImage(ImagePlus)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Returns the image selected in the "Redirect To:" popup
menu of the Analyze/Set Measurements dialog, or null
if "None" is selected, the image was not found or the
image is not the same size as <code>currentImage</code>.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/LookUpTable.html#getReds--">getReds()</a></span> - Method in class ij.<a href="ij/LookUpTable.html" title="class in ij">LookUpTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getResiduals--">getResiduals()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Returns residuals array, i.e., differences between data and curve.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getRestarts--">getRestarts()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Get maximum number of simplex restarts to do.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#getResultsTable--">getResultsTable()</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd>
<div class="block">Returns the histogram values as a ResultsTable.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#getResultsTable--">getResultsTable()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Creates a ResultsTable with the plot data.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#getResultsTable-boolean-">getResultsTable(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Creates a ResultsTable with the data of the plot.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#getResultsTable--">getResultsTable()</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Returns the plot values as a ResultsTable.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getResultsTable--">getResultsTable()</a></span> - Static method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns the ResultsTable used by the Measure command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#getResultsTable--">getResultsTable()</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Returns the default results table.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#getResultsTable--">getResultsTable()</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Returns the ResultsTable associated with this TextPanel, or null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getResultString--">getResultString()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Get a string with detailed description of the curve fitting results (several lines,
including the fit parameters).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getResultsWindow--">getResultsWindow()</a></span> - Static method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns the "Results" TextWindow.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PlugInInterpreter.html#getReturnValue--">getReturnValue()</a></span> - Method in class ij.plugin.<a href="ij/plugin/PlugInInterpreter.html" title="class in ij.plugin">PlugInInterpreter</a></dt>
<dd>
<div class="block">Returns the value returned by the script, if any, or null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getRGB-byte:A-byte:A-byte:A-">getRGB(byte[], byte[], byte[])</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns the red, green and blue planes as 3 byte arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getRGBWeights--">getRGBWeights()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns the values set by setRGBWeights(), or null if setRGBWeights() has not been called.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getRoi--">getRoi()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the current selection, or null if there is no selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#getRoi--">getRoi()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#getRoi--">getRoi()</a></span> - Method in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd>
<div class="block">Returns the ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getRoi-int-">getRoi(int)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Returns a reference to the ROI at the specified index.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getRoi--">getRoi()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a Rectangle that represents the current
region of interest.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getRoiIndex-ij.gui.Roi-">getRoiIndex(Roi)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Returns the index of the specified Roi, or -1 if it is not found.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getRoiManager--">getRoiManager()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Returns a reference to the ROI Manager and opens
the "ROI Manager" window if it is not already open.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#getRois--">getRois()</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Converts a Shape into Roi object(s).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getROIs--">getROIs()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span> </div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getRoisAsArray--">getRoisAsArray()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Returns the ROIs as an array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ControlPanel.html#getRoot--">getRoot()</a></span> - Method in class ij.plugin.<a href="ij/plugin/ControlPanel.html" title="class in ij.plugin">ControlPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#getRotationCenter--">getRotationCenter()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getRotationCenter--">getRotationCenter()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getRoundRectArcSize--">getRoundRectArcSize()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Obsolete; replaced by getCornerDiameter().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getRoundRectArcSize--">getRoundRectArcSize()</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Returns the rounded rectangle arc size, or 0 if the rounded rectangle tool is not enabled.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getRow-int-int-int:A-int-">getRow(int, int, int[], int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the pixel values along the horizontal line starting at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getRow-int-int-float:A-int-">getRow(int, int, float[], int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the pixel values along the horizontal line starting at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getRowAsString-int-">getRowAsString(int)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns a tab or comma delimited string representing the
given row, where 0<=row<=counter-1.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getRSquared--">getRSquared()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Returns R^2, where 1.0 is best.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/URLOpener.html#getSampleImageNames--">getSampleImageNames()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/URLOpener.html" title="class in ij.plugin">URLOpener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getSaveAsMenu--">getSaveAsMenu()</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Convolver.html#getScale-float:A-">getScale(float[])</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Convolver.html" title="class in ij.plugin.filter">Convolver</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getScaledStroke--">getScaledStroke()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getScaleToFit--">getScaleToFit()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getScreenSize--">getScreenSize()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns the size, in pixels, of the primary display.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getSD--">getSD()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Returns the standard deviation of the residuals.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Filters.html#getSD--">getSD()</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Filters.html" title="class in ij.plugin.filter">Filters</a></dt>
<dd>
<div class="block">Returns the default standard deviation used by Process/Noise/Add Specified Noise.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getSelectedIndex--">getSelectedIndex()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Returns the index of the first selected ROI or -1 if no ROI is selected.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getSelectedIndexes--">getSelectedIndexes()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Returns an array of the selected indexes.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getSelectedRoisAsArray--">getSelectedRoisAsArray()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Returns the selected ROIs as an array, or
all the ROIs if none are selected.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#getSelectionEnd--">getSelectionEnd()</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Returns the index of the last selected line, or -1
if there is no slection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#getSelectionStart--">getSelectionStart()</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Returns the index of the first selected line, or -1
if there is no slection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageRoi.html#getSerializedImage--">getSerializedImage()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageRoi.html" title="class in ij.gui">ImageRoi</a></dt>
<dd>
<div class="block">Returns a serialized version of the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#getShape--">getShape()</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Returns a reference to the Shape object encapsulated by this ShapeRoi.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#getShapeAsArray--">getShapeAsArray()</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Retrieves the end points and control points of the path as a float array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#getShapeRoi--">getShapeRoi()</a></span> - Method in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#getShortcuts--">getShortcuts()</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Returns the hashtable that associates shortcuts with commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandLister.html#getShortcuts--">getShortcuts()</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandLister.html" title="class in ij.plugin">CommandLister</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#getShortSliceLabel-int-">getShortSliceLabel(int)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Returns a shortened version (up to the first 60 characters or first newline and
suffix removed) of the label of the specified slice.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getShortTitle--">getShortTitle()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns a shortened version of image name that does not
include spaces or a file name extension.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getShowAllColor--">getShowAllColor()</a></span> - Static method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Obsolete</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getShowAllList--">getShowAllList()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getShowAllROIs--">getShowAllROIs()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Obsolete</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getShowLabels--">getShowLabels()</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/FontUtil.html#getSimilarFontsList-java.lang.String-">getSimilarFontsList(String)</a></span> - Static method in class ij.util.<a href="ij/util/FontUtil.html" title="class in ij.util">FontUtil</a></dt>
<dd>
<div class="block">For a few basic font types, gets a list of replacement font families
Note that java's 'SansSerif' has wider characters (significantly different metrics) than the other
sans-serif fonts in the list; thus it should be considered a fallback option only.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/WildcardMatch.html#getSingleWildcardChar--">getSingleWildcardChar()</a></span> - Method in class ij.util.<a href="ij/util/WildcardMatch.html" title="class in ij.util">WildcardMatch</a></dt>
<dd>
<div class="block">Returns the character used to specify exactly one character.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ContrastAdjuster.html#getSixteenBitRanges--">getSixteenBitRanges()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/ContrastAdjuster.html" title="class in ij.plugin.frame">ContrastAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#getSize--">getSize()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">The size of the plot including borders with axis labels etc., in pixels</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#getSize--">getSize()</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Returns the point size (0-4).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#getSize--">getSize()</a></span> - Static method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Returns the global (default) font size.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#getSize--">getSize()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Returns the number of slices in this stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Program.html#getSize--">getSize()</a></span> - Method in class ij.macro.<a href="ij/macro/Program.html" title="class in ij.macro">Program</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AVI_Reader.html#getSize--">getSize()</a></span> - Method in class ij.plugin.<a href="ij/plugin/AVI_Reader.html" title="class in ij.plugin">AVI_Reader</a></dt>
<dd>
<div class="block">Returns the number of images in this virtual stack (if it is one)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FileInfoVirtualStack.html#getSize--">getSize()</a></span> - Method in class ij.plugin.<a href="ij/plugin/FileInfoVirtualStack.html" title="class in ij.plugin">FileInfoVirtualStack</a></dt>
<dd>
<div class="block">Returns the number of images in this stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ListVirtualStack.html#getSize--">getSize()</a></span> - Method in class ij.plugin.<a href="ij/plugin/ListVirtualStack.html" title="class in ij.plugin">ListVirtualStack</a></dt>
<dd>
<div class="block">Returns the number of images in this stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#getSize--">getSize()</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Returns the number of slices in this stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getSlice--">getSlice()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#getSliceLabel-int-">getSliceLabel(int)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Returns the label of the specified slice, were 1<=n<=nslices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AVI_Reader.html#getSliceLabel-int-">getSliceLabel(int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/AVI_Reader.html" title="class in ij.plugin">AVI_Reader</a></dt>
<dd>
<div class="block">Returns the label of the specified slice in this virtual stack (if it is one).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FileInfoVirtualStack.html#getSliceLabel-int-">getSliceLabel(int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/FileInfoVirtualStack.html" title="class in ij.plugin">FileInfoVirtualStack</a></dt>
<dd>
<div class="block">Returns the label of the Nth image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ListVirtualStack.html#getSliceLabel-int-">getSliceLabel(int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ListVirtualStack.html" title="class in ij.plugin">ListVirtualStack</a></dt>
<dd>
<div class="block">Returns the name of the specified image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#getSliceLabel-int-">getSliceLabel(int)</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Returns the label of the Nth image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#getSliceLabels--">getSliceLabels()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Returns the slice labels as an array of Strings.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getSliceNumber-java.lang.String-">getSliceNumber(String)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilterRunner.html#getSliceNumber--">getSliceNumber()</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilterRunner.html" title="class in ij.plugin.filter">PlugInFilterRunner</a></dt>
<dd>
<div class="block">Return the slice number currently processed by the calling thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#getSliceNumber-java.lang.String-">getSliceNumber(String)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Returns the slice number associated with the specified name,
or -1 if the name does not include a slice number.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getSliceNumber--">getSliceNumber()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#getSliderHeight--">getSliderHeight()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getSliders--">getSliders()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns the Vector containing the sliders (Scrollbars).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#getSnapshotPixels--">getSnapshotPixels()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getSnapshotPixels--">getSnapshotPixels()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns a reference to the snapshot pixel array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#getSnapshotPixels--">getSnapshotPixels()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getSnapshotPixels--">getSnapshotPixels()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a reference to the snapshot (undo) buffer, or null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#getSnapshotPixels--">getSnapshotPixels()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getSortedFitList--">getSortedFitList()</a></span> - Static method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Returns an array of fit names with nicer sorting</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotMaker.html#getSourceImage--">getSourceImage()</a></span> - Method in interface ij.gui.<a href="ij/gui/PlotMaker.html" title="interface in ij.gui">PlotMaker</a></dt>
<dd>
<div class="block">Returns the ImagePlus used to generate the profile plots.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Profiler.html#getSourceImage--">getSourceImage()</a></span> - Method in class ij.plugin.<a href="ij/plugin/Profiler.html" title="class in ij.plugin">Profiler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZAxisProfiler.html#getSourceImage--">getSourceImage()</a></span> - Method in class ij.plugin.<a href="ij/plugin/ZAxisProfiler.html" title="class in ij.plugin">ZAxisProfiler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#getSrcRect--">getSrcRect()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getStack--">getStack()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the image stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getStackIndex-int-int-int-">getStackIndex(int, int, int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns that stack index (one-based) corresponding to the specified position.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getStackSize--">getStackSize()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">If this is a stack, returns the number of slices, else returns 1.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getStartTime--">getStartTime()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the time in milliseconds when
startTiming() was last called.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Startup.html#getStartupMacro--">getStartupMacro()</a></span> - Method in class ij.plugin.<a href="ij/plugin/Startup.html" title="class in ij.plugin">Startup</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getState--">getState()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getStaticGlobalCalibration--">getStaticGlobalCalibration()</a></span> - Static method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">This is a version of getGlobalCalibration() that can be called from a static context.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getStatistics--">getStatistics()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getStatistics--">getStatistics()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Get calibrated statistics for this image or ROI, including
histogram, area, mean, min and max, standard
deviation and mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getStatistics-int-">getStatistics(int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns an ImageStatistics object generated using the
specified measurement options.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getStatistics-int-int-">getStatistics(int, int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns an ImageStatistics object generated using the
specified measurement options and histogram bin count.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getStatistics-int-int-double-double-">getStatistics(int, int, double, double)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns an ImageStatistics object generated using the
specified measurement options, histogram bin count and histogram range.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getStatistics--">getStatistics()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">This method calculates and returns complete uncalibrated statistics for
this image or ROI but it is up to 70 times slower than getStats().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#getStatistics-ij.process.ImageProcessor-">getStatistics(ImageProcessor)</a></span> - Static method in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#getStatistics-ij.process.ImageProcessor-int-ij.measure.Calibration-">getStatistics(ImageProcessor, int, Calibration)</a></span> - Static method in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getStats--">getStats()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Calculates and returns uncalibrated statistics for this image or ROI,
including histogram, area, mean, min and max, standard deviation,
and mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getStatus--">getStatus()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#getStatusBar--">getStatusBar()</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getStatusString--">getStatusString()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Get a short text with a short description of the status.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getString-java.lang.String-java.lang.String-">getString(String, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Allows the user to enter a string in a dialog box.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#getString-java.lang.String-">getString(String)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Finds an string in IJ_Props or IJ_Prefs.txt.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#getString-java.lang.String-java.lang.String-">getString(String, String)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Finds an string in IJ_Props or IJ_Prefs.txt.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getStringBounds-java.lang.String-">getStringBounds(String)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a rectangle enclosing the pixels affected by drawString
assuming it is drawn at (x=0, y=0).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getStringFields--">getStringFields()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns the Vector containing the string TextFields.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getStringProperty-java.lang.String-">getStringProperty(String)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the string value from the "Info" property string
associated with 'key', or null if the key is not found.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getStringValue-java.lang.String-int-">getStringValue(String, int)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns the string value of the given column and row,
where row must be greater than or equal zero
and less than the value returned by size().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getStringValue-int-int-">getStringValue(int, int)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns the string value of the given column and row, where
column must be less than or equal the value returned by
getLastColumn() and row must be greater than or equal
zero and less than the value returned by size().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#getStringVariable-java.lang.String-">getStringVariable(String)</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getStringWidth-java.lang.String-">getStringWidth(String)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the width in pixels of the specified string, including any background
space (whitespace) between the x drawing coordinate and the string, not necessarily
including all whitespace at the right.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/Java2.html#getStringWidth-java.lang.String-java.awt.FontMetrics-java.awt.Graphics-">getStringWidth(String, FontMetrics, Graphics)</a></span> - Static method in class ij.util.<a href="ij/util/Java2.html" title="class in ij.util">Java2</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getStroke--">getStroke()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the Stroke used to draw this ROI, or null if no Stroke is used.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getStrokeColor--">getStrokeColor()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the the color used to draw the ROI outline or null if the default color is being used.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getStrokeWidth--">getStrokeWidth()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the lineWidth.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/OtherInstance.html#getStubPath--">getStubPath()</a></span> - Static method in class ij.<a href="ij/OtherInstance.html" title="class in ij">OtherInstance</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#getStyle--">getStyle()</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#getStyle--">getStyle()</a></span> - Static method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Returns the global (default) font style.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getSumResidualsSqr--">getSumResidualsSqr()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Program.html#getSymbolTable--">getSymbolTable()</a></span> - Method in class ij.macro.<a href="ij/macro/Program.html" title="class in ij.macro">Program</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getT--">getT()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the current hyperstack frame position.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getTableAsImage--">getTableAsImage()</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns the contents of this ResultsTable as a FloatProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/DicomTools.html#getTag-ij.ImagePlus-java.lang.String-">getTag(ImagePlus, String)</a></span> - Static method in class ij.util.<a href="ij/util/DicomTools.html" title="class in ij.util">DicomTools</a></dt>
<dd>
<div class="block">Returns the value (as a string) of the specified DICOM tag id (in the form "0018,0050")
of the specified image or stack slice.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getTempCurrentImage--">getTempCurrentImage()</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Returns the temporary current image for this thread, or null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#getText--">getText()</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#getText--">getText()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#getText--">getText()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#getText--">getText()</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Returns all the text as a string.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#getTextArea--">getTextArea()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getTextArea1--">getTextArea1()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns a reference to textArea1.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getTextArea2--">getTextArea2()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns a reference to textArea2.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getTextPanel--">getTextPanel()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns a reference to the "Results" window TextPanel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#getTextPanel--">getTextPanel()</a></span> - Method in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd>
<div class="block">Returns a reference to this TextWindow's TextPanel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroRunner.html#getThread--">getThread()</a></span> - Method in class ij.macro.<a href="ij/macro/MacroRunner.html" title="class in ij.macro">MacroRunner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#getThreads--">getThreads()</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Returns the number of threads used by PlugInFilters to process images and stacks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/AutoThresholder.html#getThreshold-ij.process.AutoThresholder.Method-int:A-">getThreshold(AutoThresholder.Method, int[])</a></span> - Method in class ij.process.<a href="ij/process/AutoThresholder.html" title="class in ij.process">AutoThresholder</a></dt>
<dd>
<div class="block">Calculates and returns a threshold using the specified
method and 256 bin histogram.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/AutoThresholder.html#getThreshold-java.lang.String-int:A-">getThreshold(String, int[])</a></span> - Method in class ij.process.<a href="ij/process/AutoThresholder.html" title="class in ij.process">AutoThresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#getTiffFileInfo-java.lang.String-">getTiffFileInfo(String)</a></span> - Static method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Returns the FileInfo of the specified TIFF file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#getTiffInfo--">getTiffInfo()</a></span> - Method in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getTimeUnit--">getTimeUnit()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Returns the distance unit (e.g.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#getTitle--">getTitle()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Returns the title of the image showing the plot (if any) or title of the plot</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getTitle--">getTitle()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the image name.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/WandToolOptions.html#getTolerance--">getTolerance()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/WandToolOptions.html" title="class in ij.plugin">WandToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/ArrowTool.html#getToolIcon--">getToolIcon()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/ArrowTool.html" title="class in ij.plugin.tool">ArrowTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/BrushTool.html#getToolIcon--">getToolIcon()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/BrushTool.html" title="class in ij.plugin.tool">BrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/OverlayBrushTool.html#getToolIcon--">getToolIcon()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/OverlayBrushTool.html" title="class in ij.plugin.tool">OverlayBrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PixelInspectionTool.html#getToolIcon--">getToolIcon()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PixelInspectionTool.html" title="class in ij.plugin.tool">PixelInspectionTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PlugInTool.html#getToolIcon--">getToolIcon()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool">PlugInTool</a></dt>
<dd>
<div class="block">Return the string encoding of the tool icon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/RoiRotationTool.html#getToolIcon--">getToolIcon()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/RoiRotationTool.html" title="class in ij.plugin.tool">RoiRotationTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getToolId--">getToolId()</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Returns the ID of the current tool (Toolbar.RECTANGLE, Toolbar.OVAL, etc.).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getToolId-java.lang.String-">getToolId(String)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Returns the ID of the tool whose name (the description displayed in the status bar)
starts with the specified string, or -1 if the tool is not found.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#getToolName--">getToolName()</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Returns the name of the current tool.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getToolName--">getToolName()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns the name of the current tool.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/ArrowTool.html#getToolName--">getToolName()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/ArrowTool.html" title="class in ij.plugin.tool">ArrowTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/BrushTool.html#getToolName--">getToolName()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/BrushTool.html" title="class in ij.plugin.tool">BrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/OverlayBrushTool.html#getToolName--">getToolName()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/OverlayBrushTool.html" title="class in ij.plugin.tool">OverlayBrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PixelInspectionTool.html#getToolName--">getToolName()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PixelInspectionTool.html" title="class in ij.plugin.tool">PixelInspectionTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PlugInTool.html#getToolName--">getToolName()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool">PlugInTool</a></dt>
<dd>
<div class="block">Return the tool name.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/RoiRotationTool.html#getToolName--">getToolName()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/RoiRotationTool.html" title="class in ij.plugin.tool">RoiRotationTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getTPosition--">getTPosition()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the frame position of this ROI, or zero
if this ROI is not associated with a particular frame.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Clipboard.html#getTransferData-java.awt.datatransfer.DataFlavor-">getTransferData(DataFlavor)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Clipboard.html" title="class in ij.plugin">Clipboard</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Clipboard.html#getTransferDataFlavors--">getTransferDataFlavors()</a></span> - Method in class ij.plugin.<a href="ij/plugin/Clipboard.html" title="class in ij.plugin">Clipboard</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#getTransparentIndex--">getTransparentIndex()</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Returns the transparent index (0-255), or -1 if transparency is disabled.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getType--">getType()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getType--">getType()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the current image type (ImagePlus.GRAY8, ImagePlus.GRAY16,
ImagePlus.GRAY32, ImagePlus.COLOR_256 or ImagePlus.COLOR_RGB).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getTypeAsString--">getTypeAsString()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Convenience method that converts Roi type to a human-readable form.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#getTypeName-int-">getTypeName(int)</a></span> - Static method in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#getUMeans--">getUMeans()</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Returns an array containing the first 20 uncalibrated means.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#getUncalibratedLength--">getUncalibratedLength()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GUI.html#getUnionOfBounds--">getUnionOfBounds()</a></span> - Static method in class ij.gui.<a href="ij/gui/GUI.html" title="class in ij.gui">GUI</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getUniqueName-java.lang.String-">getUniqueName(String)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Returns a unique name by adding, before the extension, -1, -2, etc.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getUnit--">getUnit()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Returns the default length unit (e.g.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#getUnitIncrement--">getUnitIncrement()</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getUnits--">getUnits()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Returns the plural form of the length unit (e.g.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#getValue-java.lang.String-">getValue(String)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#getValue--">getValue()</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Macro.html#getValue-java.lang.String-java.lang.String-java.lang.String-">getValue(String, String, String)</a></span> - Static method in class ij.<a href="ij/Macro.html" title="class in ij">Macro</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getValue-int-int-">getValue(int, int)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by getValueAsDouble</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getValue-java.lang.String-int-">getValue(String, int)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns the value of the specified column and row, where
column is the column heading and row is a number greater
than or equal zero and less than value returned by size().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#getValueAsDouble-int-int-">getValueAsDouble(int, int)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns the value of the given column and row, where
column must be less than or equal the value returned by
getLastColumn() and row must be greater than or equal
zero and less than the value returned by size().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getValueUnit--">getValueUnit()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Returns the value unit.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#getVariable-java.lang.String-">getVariable(String)</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#getVariable2-java.lang.String-">getVariable2(String)</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#getVariableAsString-java.lang.String-">getVariableAsString(String)</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#getVariables--">getVariables()</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/ArrayUtil.html#getVariance--">getVariance()</a></span> - Method in class ij.util.<a href="ij/util/ArrayUtil.html" title="class in ij.util">ArrayUtil</a></dt>
<dd>
<div class="block">Variance value</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#getVersion--">getVersion()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns the ImageJ version number as a string.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PlugInInterpreter.html#getVersion--">getVersion()</a></span> - Method in class ij.plugin.<a href="ij/plugin/PlugInInterpreter.html" title="class in ij.plugin">PlugInInterpreter</a></dt>
<dd>
<div class="block">Returns the version of ImageJ at the time this plugin was created.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#getVisibleAmount--">getVisibleAmount()</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#getVoxel-int-int-int-">getVoxel(int, int, int)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Returns, as a double, the specified voxel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/DicomTools.html#getVoxelDepth-ij.ImageStack-">getVoxelDepth(ImageStack)</a></span> - Static method in class ij.util.<a href="ij/util/DicomTools.html" title="class in ij.util">DicomTools</a></dt>
<dd>
<div class="block">Calculates the voxel depth of the specified DICOM stack based
on the distance between the first and last slices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#getVoxels-int-int-int-int-int-int-float:A-">getVoxels(int, int, int, int, int, int, float[])</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#getVoxels-int-int-int-int-int-int-float:A-int-">getVoxels(int, int, int, int, int, int, float[], int)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#getWeightingFactors--">getWeightingFactors()</a></span> - Static method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns the three weighting factors used by getPixelValue(),
getHistogram() and convertToByte() to do color conversions.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#getWidth--">getWidth()</a></span> - Static method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getWidth--">getWidth()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#getWidth--">getWidth()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AVI_Reader.html#getWidth--">getWidth()</a></span> - Method in class ij.plugin.<a href="ij/plugin/AVI_Reader.html" title="class in ij.plugin">AVI_Reader</a></dt>
<dd>
<div class="block">Returns the image width of the virtual stack</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FileInfoVirtualStack.html#getWidth--">getWidth()</a></span> - Method in class ij.plugin.<a href="ij/plugin/FileInfoVirtualStack.html" title="class in ij.plugin">FileInfoVirtualStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ListVirtualStack.html#getWidth--">getWidth()</a></span> - Method in class ij.plugin.<a href="ij/plugin/ListVirtualStack.html" title="class in ij.plugin">ListVirtualStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#getWidth--">getWidth()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the width of this image in pixels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getWindow--">getWindow()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the ImageWindow that is being used to display
this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getWindow-java.lang.String-">getWindow(String)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Returns the window (a Frame or a Dialog) with the specified
title, or null if a window with that title is not found.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#getWindowCount--">getWindowCount()</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Returns the number of open image windows.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getX-double-">getX(double)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Converts a x-coodinate in pixels to physical units (e.g.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getXBase--">getXBase()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#getXCoordinates--">getXCoordinates()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Obsolete; replaced by either getPolygon() or getFloatPolygon().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getXPoints--">getXPoints()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">returns the array with the x data</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getXUnit--">getXUnit()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Returns the X length unit.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#getXValues--">getXValues()</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#getXValues--">getXValues()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Get the x coordinates of the data set passed with the constructor (if not null)
or otherwise of the data set of the first 'addPoints'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#getXValues--">getXValues()</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#getXZImage--">getXZImage()</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getY-double-">getY(double)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Converts a y-coordinate in pixels to physical units (e.g.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getY-double-int-">getY(double, int)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Converts a y-coordinate in pixels to physical units (e.g.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getYBase--">getYBase()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#getYCoordinates--">getYCoordinates()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Obsolete; replaced by either getPolygon() or getFloatPolygon().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#getYPoints--">getYPoints()</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">returns the array with the y data</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getYUnit--">getYUnit()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Returns the Y length unit, or the default unit if 'yunit' is null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ColorThresholder.html#getYUV-ij.process.ImageProcessor-byte:A-byte:A-byte:A-">getYUV(ImageProcessor, byte[], byte[], byte[])</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ColorThresholder.html" title="class in ij.plugin.frame">ColorThresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#getYValues--">getYValues()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Get the y coordinates of the data set passed with the constructor (if not null)
or otherwise of the data set of the first 'addPoints'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#getYValues--">getYValues()</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#getYZImage--">getYZImage()</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#getZ--">getZ()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns the current hyperstack slice position.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getZ-double-">getZ(double)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Converts a z-coordinate in pixels to physical units (e.g.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GUI.html#getZeroBasedMaxBounds--">getZeroBasedMaxBounds()</a></span> - Static method in class ij.gui.<a href="ij/gui/GUI.html" title="class in ij.gui">GUI</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageRoi.html#getZeroTransparent--">getZeroTransparent()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageRoi.html" title="class in ij.gui">ImageRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#getZPosition--">getZPosition()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns the slice position of this ROI, or zero
if this ROI is not associated with a particular slice.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#getZUnit--">getZUnit()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Returns the Z length unit, or the default unit if 'zunit' is null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#GIF">GIF</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#GIF_OR_JPG">GIF_OR_JPG</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/GIF_Reader.html" title="class in ij.plugin"><span class="typeNameLink">GIF_Reader</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin opens GIFs and Animated GIFs.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/GIF_Reader.html#GIF_Reader--">GIF_Reader()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/GIF_Reader.html" title="class in ij.plugin">GIF_Reader</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/GifWriter.html" title="class in ij.plugin"><span class="typeNameLink">GifWriter</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Writes a stack as an animated Gif</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/GifWriter.html#GifWriter--">GifWriter()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/GifWriter.html" title="class in ij.plugin">GifWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#gLUT1">gLUT1</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#gLUT2">gLUT2</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#GRAY12_UNSIGNED">GRAY12_UNSIGNED</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">12-bit unsigned integer (0-4095).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#GRAY16">GRAY16</a></span> - Static variable in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#GRAY16">GRAY16</a></span> - Static variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">16-bit grayscale (unsigned)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#GRAY16_SIGNED">GRAY16_SIGNED</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">16-bit signed integer (-32768-32767).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#GRAY16_UNSIGNED">GRAY16_UNSIGNED</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">16-bit unsigned integer (0-65535).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#GRAY24_UNSIGNED">GRAY24_UNSIGNED</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">24-bit unsigned integer.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#GRAY32">GRAY32</a></span> - Static variable in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#GRAY32">GRAY32</a></span> - Static variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">32-bit floating-point grayscale</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#GRAY32_FLOAT">GRAY32_FLOAT</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">32-bit floating-point.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#GRAY32_INT">GRAY32_INT</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">32-bit signed integer.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#GRAY32_UNSIGNED">GRAY32_UNSIGNED</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">32-bit unsigned integer.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#GRAY64_FLOAT">GRAY64_FLOAT</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">64-bit floating-point.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#GRAY8">GRAY8</a></span> - Static variable in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#GRAY8">GRAY8</a></span> - Static variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">8-bit grayscale (unsigned)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#GRAY8">GRAY8</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">8-bit unsigned integer (0-255).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#GRAYSCALE">GRAYSCALE</a></span> - Static variable in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd>
<div class="block">Display modes (note: TRANSPARENT mode has not yet been implemented)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#GRAYSCALE">GRAYSCALE</a></span> - Static variable in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Image display modes</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RGBStackSplitter.html#green">green</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/RGBStackSplitter.html" title="class in ij.plugin.filter">RGBStackSplitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#greens">greens</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Grid.html" title="class in ij.plugin"><span class="typeNameLink">Grid</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This class implements the Analyze/Tools/Grid command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Grid.html#Grid--">Grid()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Grid.html" title="class in ij.plugin">Grid</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/GroupedZProjector.html" title="class in ij.plugin"><span class="typeNameLink">GroupedZProjector</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Image/Stacks/Tools/Grouped Z Project command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/GroupedZProjector.html#GroupedZProjector--">GroupedZProjector()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/GroupedZProjector.html" title="class in ij.plugin">GroupedZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/GroupedZProjector.html#groupZProject-ij.ImagePlus-int-int-">groupZProject(ImagePlus, int, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/GroupedZProjector.html" title="class in ij.plugin">GroupedZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/EllipseRoi.html#grow-int-int-">grow(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/EllipseRoi.html" title="class in ij.gui">EllipseRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/FreehandRoi.html#grow-int-int-">grow(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/FreehandRoi.html" title="class in ij.gui">FreehandRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#grow-int-int-">grow(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#grow-int-int-">grow(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#grow-int-int-">grow(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/RotatedRectRoi.html#grow-int-int-">grow(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/RotatedRectRoi.html" title="class in ij.gui">RotatedRectRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GT">GT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#GTE">GTE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><a href="ij/gui/GUI.html" title="class in ij.gui"><span class="typeNameLink">GUI</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This class consists of static GUI utility methods.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GUI.html#GUI--">GUI()</a></span> - Constructor for class ij.gui.<a href="ij/gui/GUI.html" title="class in ij.gui">GUI</a></dt>
<dd> </dd>
</dl>
<a name="I:H">
<!-- -->
</a>
<h2 class="title">H</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#HAMMING">HAMMING</a></span> - Static variable in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#HAND">HAND</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#handCursor">handCursor</a></span> - Static variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.ExceptionHandler.html#handle-java.lang.Throwable-">handle(Throwable)</a></span> - Method in interface ij.<a href="ij/IJ.ExceptionHandler.html" title="interface in ij">IJ.ExceptionHandler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#HANDLE_SIZE">HANDLE_SIZE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#handleColor">handleColor</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#handleException-java.lang.Throwable-">handleException(Throwable)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Displays a stack trace.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroExtension.html#handleExtension-java.lang.String-java.lang.Object:A-">handleExtension(String, Object[])</a></span> - Method in interface ij.macro.<a href="ij/macro/MacroExtension.html" title="interface in ij.macro">MacroExtension</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#handleMouseDown-int-int-">handleMouseDown(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#handleMouseDown-int-int-">handleMouseDown(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#handleMouseDown-int-int-">handleMouseDown(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#handleMouseDrag-int-int-int-">handleMouseDrag(int, int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/EllipseRoi.html#handleMouseUp-int-int-">handleMouseUp(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/EllipseRoi.html" title="class in ij.gui">EllipseRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/FreehandRoi.html#handleMouseUp-int-int-">handleMouseUp(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/FreehandRoi.html" title="class in ij.gui">FreehandRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#handleMouseUp-int-int-">handleMouseUp(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#handleMouseUp-int-int-">handleMouseUp(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#handleMouseUp-int-int-">handleMouseUp(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">With segmented selections, ignore first mouse up and finalize
when user double-clicks, control-clicks or clicks in start box.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#handleMouseUp-int-int-">handleMouseUp(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/RotatedRectRoi.html#handleMouseUp-int-int-">handleMouseUp(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/RotatedRectRoi.html" title="class in ij.gui">RotatedRectRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#handleMouseUp-int-int-">handleMouseUp(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#handlePopupMenu-java.awt.event.MouseEvent-">handlePopupMenu(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#handler">handler</a></span> - Variable in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#handleRoiMouseDown-java.awt.event.MouseEvent-">handleRoiMouseDown(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#HANN">HANN</a></span> - Static variable in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#hasCustomLuts--">hasCustomLuts()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#hasHyperStackPosition--">hasHyperStackPosition()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns 'true' if setPosition(C,Z,T) has been called.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.PointIterator.html#hasNext--">hasNext()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.PointIterator.html" title="class in ij.gui">Line.PointIterator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Program.html#hasVars--">hasVars()</a></span> - Method in class ij.macro.<a href="ij/macro/Program.html" title="class in ij.macro">Program</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Program.html#hasWord-java.lang.String-">hasWord(String)</a></span> - Method in class ij.macro.<a href="ij/macro/Program.html" title="class in ij.macro">Program</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#HEADER2_OFFSET">HEADER2_OFFSET</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#HEADLESS">HEADLESS</a></span> - Static variable in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProgressBar.html#HEIGHT">HEIGHT</a></span> - Static variable in class ij.gui.<a href="ij/gui/ProgressBar.html" title="class in ij.gui">ProgressBar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#height">height</a></span> - Variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#height">height</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#height">height</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#height">height</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#HEIGHT_KEY">HEIGHT_KEY</a></span> - Static variable in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#HEIGHTD">HEIGHTD</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#hexDigits">hexDigits</a></span> - Static variable in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd>
<div class="block">This array contains the 16 hex digits '0'-'F'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Colors.html#hexToColor-java.lang.String-">hexToColor(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Colors.html" title="class in ij.plugin">Colors</a></dt>
<dd>
<div class="block">Converts a hex color (e.g., "ffff00") into "red", "green", "yellow", etc.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Colors.html#hexToColor2-java.lang.String-">hexToColor2(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Colors.html" title="class in ij.plugin">Colors</a></dt>
<dd>
<div class="block">Converts a hex color (e.g., "ffff00") into "Red", "Green", "Yellow", etc.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#HGAP">HGAP</a></span> - Static variable in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotDialog.html#HI_RESOLUTION">HI_RESOLUTION</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotDialog.html" title="class in ij.gui">PlotDialog</a></dt>
<dd>
<div class="block">types of dialog</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#hide--">hide()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Closes the window, if any, that is displaying this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#hideCancelButton--">hideCancelButton()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">No not display "Cancel" button.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/TextReader.html#hideErrorMessages--">hideErrorMessages()</a></span> - Method in class ij.plugin.<a href="ij/plugin/TextReader.html" title="class in ij.plugin">TextReader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#hideProcessStackDialog">hideProcessStackDialog</a></span> - Static variable in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#hideProgress--">hideProgress()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span> </div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#hideZoomIndicator-boolean-">hideZoomIndicator(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#histMax">histMax</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#histMin">histMin</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#histogram">histogram</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Histogram.html" title="class in ij.plugin"><span class="typeNameLink">Histogram</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Analyze/Histogram command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Histogram.html#Histogram--">Histogram()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Histogram.html" title="class in ij.plugin">Histogram</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#histogram">histogram</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Use getHIstogram() to get histogram as long array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#histogram16">histogram16</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Bin width 1 histogram of 16-bit images</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#histogramMax">histogramMax</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#histogramMin">histogramMin</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#histogramSize">histogramSize</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><a href="ij/gui/HistogramWindow.html" title="class in ij.gui"><span class="typeNameLink">HistogramWindow</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This class is an extended ImageWindow that displays histograms.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#HistogramWindow-ij.ImagePlus-">HistogramWindow(ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd>
<div class="block">Displays a histogram using the title "Histogram of ImageName".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#HistogramWindow-java.lang.String-ij.ImagePlus-int-">HistogramWindow(String, ImagePlus, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd>
<div class="block">Displays a histogram using the specified title and number of bins.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#HistogramWindow-java.lang.String-ij.ImagePlus-int-double-double-">HistogramWindow(String, ImagePlus, int, double, double)</a></span> - Constructor for class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd>
<div class="block">Displays a histogram using the specified title, number of bins and histogram range.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#HistogramWindow-java.lang.String-ij.ImagePlus-int-double-double-int-">HistogramWindow(String, ImagePlus, int, double, double, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd>
<div class="block">Displays a histogram using the specified title, number of bins, histogram range and yMax.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#HistogramWindow-java.lang.String-ij.ImagePlus-ij.process.ImageStatistics-">HistogramWindow(String, ImagePlus, ImageStatistics)</a></span> - Constructor for class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd>
<div class="block">Displays a histogram using the specified title and ImageStatistics.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#histYMax">histYMax</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#HOST_COMPUTER">HOST_COMPUTER</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Hotkeys.html" title="class in ij.plugin"><span class="typeNameLink">Hotkeys</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Implements the Plugins/Hotkeys/Create Shortcut and Remove commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Hotkeys.html#Hotkeys--">Hotkeys()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Hotkeys.html" title="class in ij.plugin">Hotkeys</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#HSBtoRGB-double-double-double-">HSBtoRGB(double, double, double)</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#HSBtoRGB-double:A-">HSBtoRGB(double[])</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><a href="ij/gui/HTMLDialog.html" title="class in ij.gui"><span class="typeNameLink">HTMLDialog</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This is modal or non-modal dialog box that displays HTML formated text.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HTMLDialog.html#HTMLDialog-java.lang.String-java.lang.String-">HTMLDialog(String, String)</a></span> - Constructor for class ij.gui.<a href="ij/gui/HTMLDialog.html" title="class in ij.gui">HTMLDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HTMLDialog.html#HTMLDialog-java.awt.Dialog-java.lang.String-java.lang.String-">HTMLDialog(Dialog, String, String)</a></span> - Constructor for class ij.gui.<a href="ij/gui/HTMLDialog.html" title="class in ij.gui">HTMLDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HTMLDialog.html#HTMLDialog-java.lang.String-java.lang.String-boolean-">HTMLDialog(String, String, boolean)</a></span> - Constructor for class ij.gui.<a href="ij/gui/HTMLDialog.html" title="class in ij.gui">HTMLDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HTMLDialog.html#hyperlinkUpdate-javax.swing.event.HyperlinkEvent-">hyperlinkUpdate(HyperlinkEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/HTMLDialog.html" title="class in ij.gui">HTMLDialog</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/HyperStackConverter.html" title="class in ij.plugin"><span class="typeNameLink">HyperStackConverter</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Implements the "Stack to HyperStack", "RGB to HyperStack"
and "HyperStack to Stack" commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackConverter.html#HyperStackConverter--">HyperStackConverter()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/HyperStackConverter.html" title="class in ij.plugin">HyperStackConverter</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/HyperStackMaker.html" title="class in ij.plugin"><span class="typeNameLink">HyperStackMaker</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the File/New/Hyperstack command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackMaker.html#HyperStackMaker--">HyperStackMaker()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/HyperStackMaker.html" title="class in ij.plugin">HyperStackMaker</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/HyperStackReducer.html" title="class in ij.plugin"><span class="typeNameLink">HyperStackReducer</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Implements the Image/HyperStacks/Reduce Dimensionality command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackReducer.html#HyperStackReducer--">HyperStackReducer()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/HyperStackReducer.html" title="class in ij.plugin">HyperStackReducer</a></dt>
<dd>
<div class="block">Default constructor</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackReducer.html#HyperStackReducer-ij.ImagePlus-">HyperStackReducer(ImagePlus)</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/HyperStackReducer.html" title="class in ij.plugin">HyperStackReducer</a></dt>
<dd>
<div class="block">Constructs a HyperStackReducer using the specified source image.</div>
</dd>
</dl>
<a name="I:I">
<!-- -->
</a>
<h2 class="title">I</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#ic">ic</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#ic">ic</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#IF">IF</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#ignoreClipRect">ignoreClipRect</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageLayout.html#ignoreNonImageWidths-boolean-">ignoreNonImageWidths(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageLayout.html" title="class in ij.gui">ImageLayout</a></dt>
<dd>
<div class="block">Determines whether to ignore the width of non-image components when calculating
the preferred width (default false, i.e.</div>
</dd>
<dt><a href="ij/package-summary.html">ij</a> - package ij</dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#ij">ij</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#ij">ij</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><a href="ij/IJ.html" title="class in ij"><span class="typeNameLink">IJ</span></a> - Class in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">This class consists of static utility methods.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#IJ--">IJ()</a></span> - Constructor for class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><a href="ij/IJ.ExceptionHandler.html" title="interface in ij"><span class="typeNameLink">IJ.ExceptionHandler</span></a> - Interface in <a href="ij/package-summary.html">ij</a></dt>
<dd> </dd>
<dt><a href="ij/gui/package-summary.html">ij.gui</a> - package ij.gui</dt>
<dd> </dd>
<dt><a href="ij/io/package-summary.html">ij.io</a> - package ij.io</dt>
<dd> </dd>
<dt><a href="ij/macro/package-summary.html">ij.macro</a> - package ij.macro</dt>
<dd> </dd>
<dt><a href="ij/measure/package-summary.html">ij.measure</a> - package ij.measure</dt>
<dd> </dd>
<dt><a href="ij/plugin/package-summary.html">ij.plugin</a> - package ij.plugin</dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a> - package ij.plugin.filter</dt>
<dd> </dd>
<dt><a href="ij/plugin/frame/package-summary.html">ij.plugin.frame</a> - package ij.plugin.frame</dt>
<dd> </dd>
<dt><a href="ij/plugin/tool/package-summary.html">ij.plugin.tool</a> - package ij.plugin.tool</dt>
<dd> </dd>
<dt><a href="ij/process/package-summary.html">ij.process</a> - package ij.process</dt>
<dd> </dd>
<dt><a href="ij/text/package-summary.html">ij.text</a> - package ij.text</dt>
<dd> </dd>
<dt><a href="ij/util/package-summary.html">ij.util</a> - package ij.util</dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#IJ_CALL">IJ_CALL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><a href="ij/IJEventListener.html" title="interface in ij"><span class="typeNameLink">IJEventListener</span></a> - Interface in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">Plugins that implement this interface are notified when the user
changes the foreground color, changes the background color,
closes the color picker, closes the Log window or switches to
another tool.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#ijInstance">ijInstance</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">reference to current instance of ImageJ (to avoid repeated IJ.getInstance() s)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#IMAGE">IMAGE</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#image">image</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#IMAGE_DESCRIPTION">IMAGE_DESCRIPTION</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#IMAGE_LENGTH">IMAGE_LENGTH</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#IMAGE_OPACITY">IMAGE_OPACITY</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#IMAGE_SIZE">IMAGE_SIZE</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#IMAGE_WIDTH">IMAGE_WIDTH</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/ImageCalculator.html" title="class in ij.plugin"><span class="typeNameLink">ImageCalculator</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Process/Image Calculator command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ImageCalculator.html#ImageCalculator--">ImageCalculator()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ImageCalculator.html" title="class in ij.plugin">ImageCalculator</a></dt>
<dd> </dd>
<dt><a href="ij/gui/ImageCanvas.html" title="class in ij.gui"><span class="typeNameLink">ImageCanvas</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This is a Canvas used to display images in a Window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#ImageCanvas-ij.ImagePlus-">ImageCanvas(ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#imageClosed-ij.ImagePlus-">imageClosed(ImagePlus)</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#imageClosed-ij.ImagePlus-">imageClosed(ImagePlus)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">For live plots, if either the source image or this image are closed, exit live mode</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageListener.html#imageClosed-ij.ImagePlus-">imageClosed(ImagePlus)</a></span> - Method in interface ij.<a href="ij/ImageListener.html" title="interface in ij">ImageListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/EventListener.html#imageClosed-ij.ImagePlus-">imageClosed(ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/EventListener.html" title="class in ij.plugin">EventListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#imageClosed-ij.ImagePlus-">imageClosed(ImagePlus)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#imageClosed-ij.ImagePlus-">imageClosed(ImagePlus)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Implementation of ImageListener interface: update window list, if image is opened or closed</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#imageClosed-ij.ImagePlus-">imageClosed(ImagePlus)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#imageClosed-ij.ImagePlus-">imageClosed(ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><a href="ij/process/ImageConverter.html" title="class in ij.process"><span class="typeNameLink">ImageConverter</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This class converts an ImagePlus object to a different type.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageConverter.html#ImageConverter-ij.ImagePlus-">ImageConverter(ImagePlus)</a></span> - Constructor for class ij.process.<a href="ij/process/ImageConverter.html" title="class in ij.process">ImageConverter</a></dt>
<dd>
<div class="block">Constructs an ImageConverter based on an ImagePlus object.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#imageHeight">imageHeight</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/ImageInfo.html" title="class in ij.plugin"><span class="typeNameLink">ImageInfo</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Image/Show Info command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ImageInfo.html#ImageInfo--">ImageInfo()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ImageInfo.html" title="class in ij.plugin">ImageInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#IMAGEIO">IMAGEIO</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><a href="ij/ImageJ.html" title="class in ij"><span class="typeNameLink">ImageJ</span></a> - Class in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">This frame is the main ImageJ class.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#ImageJ--">ImageJ()</a></span> - Constructor for class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Creates a new ImageJ frame that runs as an application.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#ImageJ-int-">ImageJ(int)</a></span> - Constructor for class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Creates a new ImageJ frame that runs as an application in the specified mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#ImageJ-java.applet.Applet-">ImageJ(Applet)</a></span> - Constructor for class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Creates a new ImageJ frame that runs as an applet.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#ImageJ-java.applet.Applet-int-">ImageJ(Applet, int)</a></span> - Constructor for class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">If 'applet' is not null, creates a new ImageJ frame that runs as an applet.</div>
</dd>
<dt><a href="ij/plugin/ImageJ_Updater.html" title="class in ij.plugin"><span class="typeNameLink">ImageJ_Updater</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Help/Update ImageJ command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ImageJ_Updater.html#ImageJ_Updater--">ImageJ_Updater()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ImageJ_Updater.html" title="class in ij.plugin">ImageJ_Updater</a></dt>
<dd> </dd>
<dt><a href="ij/ImageJApplet.html" title="class in ij"><span class="typeNameLink">ImageJApplet</span></a> - Class in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">Runs ImageJ as an applet and optionally opens up to
nine images using URLs passed as a parameters.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJApplet.html#ImageJApplet--">ImageJApplet()</a></span> - Constructor for class ij.<a href="ij/ImageJApplet.html" title="class in ij">ImageJApplet</a></dt>
<dd> </dd>
<dt><a href="ij/gui/ImageLayout.html" title="class in ij.gui"><span class="typeNameLink">ImageLayout</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This is a custom layout manager that supports resizing of zoomed
images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageLayout.html#ImageLayout-ij.gui.ImageCanvas-">ImageLayout(ImageCanvas)</a></span> - Constructor for class ij.gui.<a href="ij/gui/ImageLayout.html" title="class in ij.gui">ImageLayout</a></dt>
<dd>
<div class="block">Creates a new ImageLayout with center alignment.</div>
</dd>
<dt><a href="ij/ImageListener.html" title="interface in ij"><span class="typeNameLink">ImageListener</span></a> - Interface in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">Plugins that implement this interface are notified when
an image is opened, closed or updated.</div>
</dd>
<dt><a href="ij/plugin/filter/ImageMath.html" title="class in ij.plugin.filter"><span class="typeNameLink">ImageMath</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This plugin implements ImageJ's Process/Math submenu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ImageMath.html#ImageMath--">ImageMath()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/ImageMath.html" title="class in ij.plugin.filter">ImageMath</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#imageOpened-ij.ImagePlus-">imageOpened(ImagePlus)</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#imageOpened-ij.ImagePlus-">imageOpened(ImagePlus)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageListener.html#imageOpened-ij.ImagePlus-">imageOpened(ImagePlus)</a></span> - Method in interface ij.<a href="ij/ImageListener.html" title="interface in ij">ImageListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/EventListener.html#imageOpened-ij.ImagePlus-">imageOpened(ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/EventListener.html" title="class in ij.plugin">EventListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#imageOpened-ij.ImagePlus-">imageOpened(ImagePlus)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#imageOpened-ij.ImagePlus-">imageOpened(ImagePlus)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Implementation of ImageListener interface: update window list, if image is opened or closed</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#imageOpened-ij.ImagePlus-">imageOpened(ImagePlus)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#imageOpened-ij.ImagePlus-">imageOpened(ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><a href="ij/gui/ImagePanel.html" title="class in ij.gui"><span class="typeNameLink">ImagePanel</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This class is used by GenericDialog to add images to dialogs.</div>
</dd>
<dt><a href="ij/ImagePlus.html" title="class in ij"><span class="typeNameLink">ImagePlus</span></a> - Class in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">An ImagePlus contain an ImageProcessor (2D image) or an ImageStack (3D, 4D or 5D image).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#ImagePlus--">ImagePlus()</a></span> - Constructor for class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Constructs an uninitialized ImagePlus.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#ImagePlus-java.lang.String-java.awt.Image-">ImagePlus(String, Image)</a></span> - Constructor for class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Constructs an ImagePlus from an Image or BufferedImage.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#ImagePlus-java.lang.String-ij.process.ImageProcessor-">ImagePlus(String, ImageProcessor)</a></span> - Constructor for class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Constructs an ImagePlus from an ImageProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#ImagePlus-java.lang.String-">ImagePlus(String)</a></span> - Constructor for class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Constructs an ImagePlus from a TIFF, BMP, DICOM, FITS,
PGM, GIF or JPRG specified by a path or from a TIFF, DICOM,
GIF or JPEG specified by a URL.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#ImagePlus-java.lang.String-ij.ImageStack-">ImagePlus(String, ImageStack)</a></span> - Constructor for class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Constructs an ImagePlus from a stack.</div>
</dd>
<dt><a href="ij/process/ImageProcessor.html" title="class in ij.process"><span class="typeNameLink">ImageProcessor</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This abstract class is the superclass for classes that process
the four data types (byte, short, float and RGB) supported by ImageJ.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#ImageProcessor--">ImageProcessor()</a></span> - Constructor for class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/ImageProperties.html" title="class in ij.plugin.filter"><span class="typeNameLink">ImageProperties</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ImageProperties.html#ImageProperties--">ImageProperties()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/ImageProperties.html" title="class in ij.plugin.filter">ImageProperties</a></dt>
<dd> </dd>
<dt><a href="ij/io/ImageReader.html" title="class in ij.io"><span class="typeNameLink">ImageReader</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">Reads raw 8-bit, 16-bit or 32-bit (float or RGB)
images from a stream or URL.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/ImageReader.html#ImageReader-ij.io.FileInfo-">ImageReader(FileInfo)</a></span> - Constructor for class ij.io.<a href="ij/io/ImageReader.html" title="class in ij.io">ImageReader</a></dt>
<dd>
<div class="block">Constructs a new ImageReader using a FileInfo object to describe the file to be read.</div>
</dd>
<dt><a href="ij/gui/ImageRoi.html" title="class in ij.gui"><span class="typeNameLink">ImageRoi</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">An ImageRoi is an Roi that overlays an image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageRoi.html#ImageRoi-int-int-java.awt.image.BufferedImage-">ImageRoi(int, int, BufferedImage)</a></span> - Constructor for class ij.gui.<a href="ij/gui/ImageRoi.html" title="class in ij.gui">ImageRoi</a></dt>
<dd>
<div class="block">Creates a new ImageRoi from a BufferedImage.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageRoi.html#ImageRoi-int-int-ij.process.ImageProcessor-">ImageRoi(int, int, ImageProcessor)</a></span> - Constructor for class ij.gui.<a href="ij/gui/ImageRoi.html" title="class in ij.gui">ImageRoi</a></dt>
<dd>
<div class="block">Creates a new ImageRoi from a ImageProcessor.</div>
</dd>
<dt><a href="ij/ImageStack.html" title="class in ij"><span class="typeNameLink">ImageStack</span></a> - Class in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">This class represents an expandable array of images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#ImageStack--">ImageStack()</a></span> - Constructor for class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Default constructor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#ImageStack-int-int-">ImageStack(int, int)</a></span> - Constructor for class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Creates a new, empty image stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#ImageStack-int-int-int-">ImageStack(int, int, int)</a></span> - Constructor for class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Creates a new, empty image stack with a capacity of 'size'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#ImageStack-int-int-java.awt.image.ColorModel-">ImageStack(int, int, ColorModel)</a></span> - Constructor for class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Creates a new, empty image stack using the specified color model.</div>
</dd>
<dt><a href="ij/process/ImageStatistics.html" title="class in ij.process"><span class="typeNameLink">ImageStatistics</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">Statistics, including the histogram, of an image or selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#ImageStatistics--">ImageStatistics()</a></span> - Constructor for class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/ImagesToStack.html" title="class in ij.plugin"><span class="typeNameLink">ImagesToStack</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Implements the Image/Stacks/Images to Stack" command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ImagesToStack.html#ImagesToStack--">ImagesToStack()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ImagesToStack.html" title="class in ij.plugin">ImagesToStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#imageUpdate-java.awt.Image-int-int-int-int-int-">imageUpdate(Image, int, int, int, int, int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Used by ImagePlus to monitor loading of images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#imageUpdated-ij.ImagePlus-">imageUpdated(ImagePlus)</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#imageUpdated">imageUpdated</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#imageUpdated-ij.ImagePlus-">imageUpdated(ImagePlus)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">For live plots, this method is called if the source image content is changed.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageListener.html#imageUpdated-ij.ImagePlus-">imageUpdated(ImagePlus)</a></span> - Method in interface ij.<a href="ij/ImageListener.html" title="interface in ij">ImageListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/EventListener.html#imageUpdated-ij.ImagePlus-">imageUpdated(ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/EventListener.html" title="class in ij.plugin">EventListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#imageUpdated-ij.ImagePlus-">imageUpdated(ImagePlus)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#imageUpdated-ij.ImagePlus-">imageUpdated(ImagePlus)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#imageUpdated-ij.ImagePlus-">imageUpdated(ImagePlus)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#imageUpdated-ij.ImagePlus-">imageUpdated(ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#imageWidth">imageWidth</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><a href="ij/gui/ImageWindow.html" title="class in ij.gui"><span class="typeNameLink">ImageWindow</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">A frame for displaying images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#ImageWindow-java.lang.String-">ImageWindow(String)</a></span> - Constructor for class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#ImageWindow-ij.ImagePlus-">ImageWindow(ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#ImageWindow-ij.ImagePlus-ij.gui.ImageCanvas-">ImageWindow(ImagePlus, ImageCanvas)</a></span> - Constructor for class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><a href="ij/io/ImageWriter.html" title="class in ij.io"><span class="typeNameLink">ImageWriter</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">Writes a raw image described by a FileInfo object to an OutputStream.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/ImageWriter.html#ImageWriter-ij.io.FileInfo-">ImageWriter(FileInfo)</a></span> - Constructor for class ij.io.<a href="ij/io/ImageWriter.html" title="class in ij.io">ImageWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#img">img</a></span> - Variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#img">img</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#imp">imp</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#imp">imp</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#imp">imp</a></span> - Variable in class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#imp">imp</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#imp">imp</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#IMPORT_MENU">IMPORT_MENU</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><a href="ij/io/ImportDialog.html" title="class in ij.io"><span class="typeNameLink">ImportDialog</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">This is a dialog box used to imports raw 8, 16, 24 and 32-bit images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/ImportDialog.html#ImportDialog-java.lang.String-java.lang.String-">ImportDialog(String, String)</a></span> - Constructor for class ij.io.<a href="ij/io/ImportDialog.html" title="class in ij.io">ImportDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/ImportDialog.html#ImportDialog--">ImportDialog()</a></span> - Constructor for class ij.io.<a href="ij/io/ImportDialog.html" title="class in ij.io">ImportDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#in">in</a></span> - Variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Resizer.html#IN_PLACE">IN_PLACE</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Resizer.html" title="class in ij.plugin">Resizer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#IN_SITU_SHOW">IN_SITU_SHOW</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Replace original image with masks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#IN_TOLERANCE">IN_TOLERANCE</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd>
<div class="block">Output type all points around the maximum within the tolerance</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#INCLUDE_HOLES">INCLUDE_HOLES</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Flood fill to ignore interior holes.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#incrementCounter--">incrementCounter()</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Increments the measurement counter by one.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#INDEX_OF">INDEX_OF</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/DownsizeTable.html#indices">indices</a></span> - Variable in class ij.process.<a href="ij/process/DownsizeTable.html" title="class in ij.process">DownsizeTable</a></dt>
<dd>
<div class="block">For each source point between srcStart and srcEnd, indices of destination
points where the data should be added.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#info">info</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#info">info</a></span> - Variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Plugin writers can use this string to store information about the
image.</div>
</dd>
<dt><a href="ij/plugin/filter/Info.html" title="class in ij.plugin.filter"><span class="typeNameLink">Info</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by ij.plugin.ImageInfo</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Info.html#Info--">Info()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Info.html" title="class in ij.plugin.filter">Info</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span></div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJApplet.html#init--">init()</a></span> - Method in class ij.<a href="ij/ImageJApplet.html" title="class in ij">ImageJApplet</a></dt>
<dd>
<div class="block">Starts ImageJ if it's not already running.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#INITIALIZATION_FAILURE">INITIALIZATION_FAILURE</a></span> - Static variable in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Status returned: Could not initialize the simplex because either the initialParams
resulted in the target function returning NaN or all attempts to find starting
parameters for the other simplex points resulted in the target function returning NaN.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#inputStream">inputStream</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackInserter.html#insert-ij.ImagePlus-ij.ImagePlus-int-int-">insert(ImagePlus, ImagePlus, int, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackInserter.html" title="class in ij.plugin">StackInserter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#insert-ij.process.ImageProcessor-int-int-">insert(ImageProcessor, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Inserts the image contained in 'ip' at (xloc, yloc).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#inSituShow">inSituShow</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#install-java.lang.String-">install(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#install-java.lang.String-java.awt.Menu-">install(String, Menu)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PluginInstaller.html#install-java.lang.String-">install(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/PluginInstaller.html" title="class in ij.plugin">PluginInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#installFile-java.lang.String-">installFile(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#installFromIJJar-java.lang.String-">installFromIJJar(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd>
<div class="block">Installs a macro set contained in ij.jar.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#installLibrary-java.lang.String-">installLibrary(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#installPlugin-java.lang.String-char-java.lang.String-java.lang.String-ij.ImageJ-">installPlugin(String, char, String, String, ImageJ)</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Adds a plugin based command to the end of a specified menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#installSingleTool-java.lang.String-">installSingleTool(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#installStartupMacrosTools--">installStartupMacrosTools()</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#installStartupTools--">installStartupTools()</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#installTool-java.lang.String-">installTool(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#installUserPlugin-java.lang.String-boolean-">installUserPlugin(String, boolean)</a></span> - Method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#instanceColor">instanceColor</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#int2hex-int-int-">int2hex(int, int)</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd>
<div class="block">Converts an int to a zero-padded hex string of fixed length 'digits'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#INTEGRATED_DENSITY">INTEGRATED_DENSITY</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#INTEGRATED_DENSITY">INTEGRATED_DENSITY</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#intelByteOrder">intelByteOrder</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#intelByteOrder">intelByteOrder</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Export TIFF and Raw using little-endian byte order.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#interpolate">interpolate</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Interpolate line profiles.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#interpolate">interpolate</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#interpolateScaledImages">interpolateScaledImages</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Display images scaled <100% using bilinear interpolation</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#interpolationMethod">interpolationMethod</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><a href="ij/macro/Interpreter.html" title="class in ij.macro"><span class="typeNameLink">Interpreter</span></a> - Class in <a href="ij/macro/package-summary.html">ij.macro</a></dt>
<dd>
<div class="block">This is the recursive descent parser/interpreter for the ImageJ macro language.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#Interpreter--">Interpreter()</a></span> - Constructor for class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#INV_RODBARD">INV_RODBARD</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#INVALID_SHORTCUT">INVALID_SHORTCUT</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#invalidNumber--">invalidNumber()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns true if one or more of the numeric fields contained an
invalid number.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#inverseTransform--">inverseTransform()</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Performs an inverse transform, converting this image into the space domain.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#inverseTransform1D-float:A-">inverseTransform1D(float[])</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Performs an inverse 1D Fast Hartley Transform (FHT) of an array</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#inversionTested">inversionTested</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#INVERT">INVERT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#invert--">invert()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Each pixel in the image is inverted using p=max-(p-min), where 'min'
and 'max' are the display range limits set using setMinAndMax().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#invert--">invert()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Inverts the image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#invert--">invert()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#invert--">invert()</a></span> - Method in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#INVERT_Y">INVERT_Y</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#invertedLut">invertedLut</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#invertLut--">invertLut()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Does nothing since RGB images do not use LUTs.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#invertLut--">invertLut()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Inverts the values in this image's LUT (indexed color model).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#ip">ip</a></span> - Variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#IPLAB">IPLAB</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#IS">IS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#is64Bit--">is64Bit()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if ImageJ is running a 64-bit version of Java.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#IS_ACTIVE">IS_ACTIVE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#IS_KEY_DOWN">IS_KEY_DOWN</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#IS_NAN">IS_NAN</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#IS_OPEN">IS_OPEN</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#isActiveOverlayRoi--">isActiveOverlayRoi()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns 'true' if this ROI is displayed and is also in an overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#isAntialiased--">isAntialiased()</a></span> - Static method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Returns the state of the global 'antialiasedText' variable, which is used by the "Fonts" widget.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#isArea--">isArea()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns 'true' if this is an area selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#isAutoRunAndHide--">isAutoRunAndHide()</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd>
<div class="block">Returns true if an "AutoRunAndHide" macro was run/installed.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#isBatchMode--">isBatchMode()</a></span> - Static method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#isBatchModeRoiManager--">isBatchModeRoiManager()</a></span> - Static method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd>
<div class="block">Returns true if there is an internal batch mode RoiManager.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#isBinary--">isBinary()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Returns 'true' if this is a binary image (8-bit-image with only 0 and 255).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#isBinary--">isBinary()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns 'true' if this is a binary image (8-bit-image with only 0 and 255).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#isCalibrationBar--">isCalibrationBar()</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#isClosed--">isClosed()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd>
<div class="block">Has this window been closed?</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#isColorLut--">isColorLut()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns true if this image uses a color LUT.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#isComposite--">isComposite()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns true if this is a CompositeImage.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#isCursor--">isCursor()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Clipboard.html#isDataFlavorSupported-java.awt.datatransfer.DataFlavor-">isDataFlavorSupported(DataFlavor)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Clipboard.html" title="class in ij.plugin">Clipboard</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#isDefaultLut--">isDefaultLut()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns true if the image is using the default grayscale LUT.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#isDisplayedHyperStack--">isDisplayedHyperStack()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns 'true' if this is a hyperstack currently being displayed in a StackWindow.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#isDrawingTool--">isDrawingTool()</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#isDrawingTool--">isDrawingTool()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns 'true' if this is an ROI primarily used from drawing
(e.g., TextRoi or Arrow).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#isDrawingTool--">isDrawingTool()</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#isFrozen--">isFrozen()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#isFrozen--">isFrozen()</a></span> - Method in class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">Whether the plot is frozen, i.e.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/LookUpTable.html#isGrayscale--">isGrayscale()</a></span> - Method in class ij.<a href="ij/LookUpTable.html" title="class in ij">LookUpTable</a></dt>
<dd>
<div class="block">Returns <code>true</code> if this is a 256 entry grayscale LUT.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#isGrayscale--">isGrayscale()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns 'true' if this is a grayscale image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#isGrayscale--">isGrayscale()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns 'true' if this is an image with a grayscale LUT or an
RGB image with identical red, green and blue channels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/EllipseRoi.html#isHandle-int-int-">isHandle(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/EllipseRoi.html" title="class in ij.gui">EllipseRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#isHandle-int-int-">isHandle(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd>
<div class="block">Returns a handle number if the specified screen coordinates are
inside or near a handle, otherwise returns -1.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/OvalRoi.html#isHandle-int-int-">isHandle(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/OvalRoi.html" title="class in ij.gui">OvalRoi</a></dt>
<dd>
<div class="block">Returns a handle number if the specified screen coordinates are
inside or near a handle, otherwise returns -1.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#isHandle-int-int-">isHandle(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Returns a point index if it has been at least one second since
the last point was added and the specified screen coordinates are
inside or near a point, otherwise returns -1.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#isHandle-int-int-">isHandle(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Returns a handle number if the specified screen coordinates are
inside or near a handle, otherwise returns -1.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#isHandle-int-int-">isHandle(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns a handle number if the specified screen coordinates are
inside or near a handle, otherwise returns -1.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/RotatedRectRoi.html#isHandle-int-int-">isHandle(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/RotatedRectRoi.html" title="class in ij.gui">RotatedRectRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#isHandle-int-int-">isHandle(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Always returns -1 since ShapeRois do not have handles.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#isHSB--">isHSB()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Returns true if this is a 3-slice HSB stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#isHyperStack--">isHyperStack()</a></span> - Method in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#isHyperStack--">isHyperStack()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns 'true' if this image is a hyperstack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#isInvertedLut--">isInvertedLut()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns true is this image uses an inverting LUT that
displays zero as white and 255 as black.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#isInvertedLut--">isInvertedLut()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Always returns false since RGB images do not use LUTs.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#isInvertedLut--">isInvertedLut()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns true if this image uses an inverting LUT
that displays zero as white and 255 as black.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#isJava14--">isJava14()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Always returns true.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#isJava15--">isJava15()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Always returns true.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#isJava16--">isJava16()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if ImageJ is running on a Java 1.6 or greater JVM.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#isJava17--">isJava17()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if ImageJ is running on a Java 1.7 or greater JVM.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#isJava18--">isJava18()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if ImageJ is running on a Java 1.8 or greater JVM.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#isJava19--">isJava19()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if ImageJ is running on a Java 1.9 or greater JVM.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#isJava2--">isJava2()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Always returns true.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#isKillable--">isKillable()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span> </div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#isLab--">isLab()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Returns true if this is a Lab stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#isLine--">isLine()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns 'true' if this is a line selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#isLinux--">isLinux()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if ImageJ is running on Linux.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#isLocked--">isLocked()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns 'true' if the image is locked.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#isMacintosh--">isMacintosh()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if this machine is a Macintosh.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#isMacOSX--">isMacOSX()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if this machine is a Macintosh running OS X.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#isMacro--">isMacro()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#isMacro--">isMacro()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if a macro is running, or if the run(), open()
or newImage() method is executing.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/ArrayUtil.html#isMaximum-double-">isMaximum(double)</a></span> - Method in class ij.util.<a href="ij/util/ArrayUtil.html" title="class in ij.util">ArrayUtil</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#ISODATA">ISODATA</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Isodata thresholding method</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#ISODATA2">ISODATA2</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Modified isodata method used in Image/Adjust/Threshold tool</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#isOptionalArg-int-">isOptionalArg(int)</a></span> - Static method in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#isOrthoViewsImage-ij.ImagePlus-">isOrthoViewsImage(ImagePlus)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#isOutputArg-int-">isOutputArg(int)</a></span> - Static method in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#isPowerOf2-int-">isPowerOf2(int)</a></span> - Static method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#isPreviewActive--">isPreviewActive()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns 'true' if this dialog has a "Preview" checkbox and it is enabled.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#isProcessor--">isProcessor()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#isPseudoColorLut--">isPseudoColorLut()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns true if this image uses a pseudocolor or grayscale LUT,
in other words, is this an image that can be filtered.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#isRedirectImage--">isRedirectImage()</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Returns <code>true</code> if an image is selected in the "Redirect To:"
popup menu of the Analyze/Set Measurements dialog box.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#isResultsWindow--">isResultsWindow()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if the "Results" window is open.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#isRGB--">isRGB()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Returns true if this is a 3-slice, 8-bit RGB stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/OtherInstance.html#isRMIEnabled--">isRMIEnabled()</a></span> - Static method in class ij.<a href="ij/OtherInstance.html" title="class in ij">OtherInstance</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#isSelected-int-">isSelected(int)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Returns 'true' if the index is valid and the indexed ROI is selected.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#isSigned16Bit--">isSigned16Bit()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Returns true if this is a signed 16-bit image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#isSigned16Bit--">isSigned16Bit()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns 'true' if this is a signed 16-bit image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#isSigned16Bit--">isSigned16Bit()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Returns 'true' if this is a signed 16-bit image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#isSplineFit--">isSplineFit()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Returns 'true' if this selection has been fitted with a spline.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#isThreshold--">isThreshold()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns 'true' if this image is thresholded.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#isVirtual--">isVirtual()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Returns true if this is a virtual (disk resident) stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#isVirtual--">isVirtual()</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Always return true.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#isVisible--">isVisible()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns true if this ROI is currently displayed on an image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#isVisible--">isVisible()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Returns true if this image is currently being displayed in a window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#isVista--">isVista()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Obsolete; always returns false.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#isWindows--">isWindows()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if this machine is running Windows.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Called if the user activates/deactivates a CheckboxMenuItem</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Handles CheckboxMenuItem state changes.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BatchProcessor.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/BatchProcessor.html" title="class in ij.plugin">BatchProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Colors.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Colors.html" title="class in ij.plugin">Colors</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Concatenator.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Concatenator.html" title="class in ij.plugin">Concatenator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Duplicator.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Duplicator.html" title="class in ij.plugin">Duplicator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Channels.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Channels.html" title="class in ij.plugin.frame">Channels</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ColorThresholder.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ColorThresholder.html" title="class in ij.plugin.frame">ColorThresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ContrastAdjuster.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ContrastAdjuster.html" title="class in ij.plugin.frame">ContrastAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Fitter.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Fitter.html" title="class in ij.plugin.frame">Fitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/LineWidthAdjuster.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/LineWidthAdjuster.html" title="class in ij.plugin.frame">LineWidthAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PasteController.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PasteController.html" title="class in ij.plugin.frame">PasteController</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Item Listener method</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Resizer.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Resizer.html" title="class in ij.plugin">Resizer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Slicer.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Slicer.html" title="class in ij.plugin">Slicer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Startup.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Startup.html" title="class in ij.plugin">Startup</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Thresholder.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Thresholder.html" title="class in ij.plugin">Thresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#itemStateChanged-java.awt.event.ItemEvent-">itemStateChanged(ItemEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#iterator--">iterator()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#iterator--">iterator()</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Custom iterator for points contained in a <a href="ij/gui/PointRoi.html" title="class in ij.gui"><code>PointRoi</code></a>.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#iterator--">iterator()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Required by the <a href="/usr/share/doc/default-jdk-doc/api/java/lang/Iterable.html?is-external=true" title="class or interface in java.lang"><code>Iterable</code></a> interface.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#IterFactor">IterFactor</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">now in the Minimizer class (since ImageJ 1.46f).
(probably of not much value for anyone anyhow?)</span></div>
</div>
</dd>
</dl>
<a name="I:J">
<!-- -->
</a>
<h2 class="title">J</h2>
<dl>
<dt><a href="ij/util/Java2.html" title="class in ij.util"><span class="typeNameLink">Java2</span></a> - Class in <a href="ij/util/package-summary.html">ij.util</a></dt>
<dd>
<div class="block">This class contains static methods that use the Java 2 API.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/Java2.html#Java2--">Java2()</a></span> - Constructor for class ij.util.<a href="ij/util/Java2.html" title="class in ij.util">Java2</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#JAVA_OR_TEXT">JAVA_OR_TEXT</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/JavaProperties.html" title="class in ij.plugin"><span class="typeNameLink">JavaProperties</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Displays the Java system properties in a text window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/JavaProperties.html#JavaProperties--">JavaProperties()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/JavaProperties.html" title="class in ij.plugin">JavaProperties</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NewPlugin.html#JAVASCRIPT">JAVASCRIPT</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/NewPlugin.html" title="class in ij.plugin">NewPlugin</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/JavaScriptEvaluator.html" title="class in ij.plugin"><span class="typeNameLink">JavaScriptEvaluator</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Implements the macro editor's Macros/Evaluate JavaScript command
on systems running Java 1.6 or later.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/JavaScriptEvaluator.html#JavaScriptEvaluator--">JavaScriptEvaluator()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/JavaScriptEvaluator.html" title="class in ij.plugin">JavaScriptEvaluator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#JavaScriptIncludes">JavaScriptIncludes</a></span> - Static variable in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd>
<div class="block">ImportPackage statements added in front of scripts.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#jFileChooserSettingChanged">jFileChooserSettingChanged</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Use JFileChooser setting changed/</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#JPEG">JPEG</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#JPEG">JPEG</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#JPEG">JPEG</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/AVI_Writer.html#JPEG_COMPRESSION">JPEG_COMPRESSION</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/AVI_Writer.html" title="class in ij.plugin.filter">AVI_Writer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#JPEG_TABLES">JPEG_TABLES</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/JpegWriter.html" title="class in ij.plugin"><span class="typeNameLink">JpegWriter</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">The File/Save As/Jpeg command (FileSaver.saveAsJpeg() method)
uses this plugin to save images in JPEG format.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/JpegWriter.html#JpegWriter--">JpegWriter()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/JpegWriter.html" title="class in ij.plugin">JpegWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#justification">justification</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
</dl>
<a name="I:K">
<!-- -->
</a>
<h2 class="title">K</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ExtendedPlugInFilter.html#KEEP_PREVIEW">KEEP_PREVIEW</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/ExtendedPlugInFilter.html" title="interface in ij.plugin.filter">ExtendedPlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the last preview image may be kept as a result.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#KEEP_THRESHOLD">KEEP_THRESHOLD</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag to keep the invisible binary threshold from being reset.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#keepArrowSelections">keepArrowSelections</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Keep arrow selection after adding to overlay</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#keepUndoBuffers">keepUndoBuffers</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Preserve undo (snapshot) buffers when switching images</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/DownsizeTable.html#kernel-double-">kernel(double)</a></span> - Method in class ij.process.<a href="ij/process/DownsizeTable.html" title="class in ij.process">DownsizeTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/DownsizeTable.html#kernelSize">kernelSize</a></span> - Variable in class ij.process.<a href="ij/process/DownsizeTable.html" title="class in ij.process">DownsizeTable</a></dt>
<dd>
<div class="block">Number of kernel points per source data point</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#KEY_PREFIX">KEY_PREFIX</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#keyPressed-java.awt.event.KeyEvent-">keyPressed(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HTMLDialog.html#keyPressed-java.awt.event.KeyEvent-">keyPressed(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/HTMLDialog.html" title="class in ij.gui">HTMLDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MessageDialog.html#keyPressed-java.awt.event.KeyEvent-">keyPressed(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/MessageDialog.html" title="class in ij.gui">MessageDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/NonBlockingGenericDialog.html#keyPressed-java.awt.event.KeyEvent-">keyPressed(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/NonBlockingGenericDialog.html" title="class in ij.gui">NonBlockingGenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/SaveChangesDialog.html#keyPressed-java.awt.event.KeyEvent-">keyPressed(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/SaveChangesDialog.html" title="class in ij.gui">SaveChangesDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/WaitForUserDialog.html#keyPressed-java.awt.event.KeyEvent-">keyPressed(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/WaitForUserDialog.html" title="class in ij.gui">WaitForUserDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/YesNoCancelDialog.html#keyPressed-java.awt.event.KeyEvent-">keyPressed(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui">YesNoCancelDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#keyPressed-java.awt.event.KeyEvent-">keyPressed(KeyEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#keyPressed-java.awt.event.KeyEvent-">keyPressed(KeyEvent)</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#keyPressed-java.awt.event.KeyEvent-">keyPressed(KeyEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#keyPressed-java.awt.event.KeyEvent-">keyPressed(KeyEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Fitter.html#keyPressed-java.awt.event.KeyEvent-">keyPressed(KeyEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Fitter.html" title="class in ij.plugin.frame">Fitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#keyPressed-java.awt.event.KeyEvent-">keyPressed(KeyEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#keyPressed-java.awt.event.KeyEvent-">keyPressed(KeyEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#keyReleased-java.awt.event.KeyEvent-">keyReleased(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HTMLDialog.html#keyReleased-java.awt.event.KeyEvent-">keyReleased(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/HTMLDialog.html" title="class in ij.gui">HTMLDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MessageDialog.html#keyReleased-java.awt.event.KeyEvent-">keyReleased(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/MessageDialog.html" title="class in ij.gui">MessageDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/SaveChangesDialog.html#keyReleased-java.awt.event.KeyEvent-">keyReleased(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/SaveChangesDialog.html" title="class in ij.gui">SaveChangesDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/WaitForUserDialog.html#keyReleased-java.awt.event.KeyEvent-">keyReleased(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/WaitForUserDialog.html" title="class in ij.gui">WaitForUserDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/YesNoCancelDialog.html#keyReleased-java.awt.event.KeyEvent-">keyReleased(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui">YesNoCancelDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#keyReleased-java.awt.event.KeyEvent-">keyReleased(KeyEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#keyReleased-java.awt.event.KeyEvent-">keyReleased(KeyEvent)</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#keyReleased-java.awt.event.KeyEvent-">keyReleased(KeyEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#keyReleased-java.awt.event.KeyEvent-">keyReleased(KeyEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Fitter.html#keyReleased-java.awt.event.KeyEvent-">keyReleased(KeyEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Fitter.html" title="class in ij.plugin.frame">Fitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#keyReleased-java.awt.event.KeyEvent-">keyReleased(KeyEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#keyReleased-java.awt.event.KeyEvent-">keyReleased(KeyEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#keyTyped-java.awt.event.KeyEvent-">keyTyped(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HTMLDialog.html#keyTyped-java.awt.event.KeyEvent-">keyTyped(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/HTMLDialog.html" title="class in ij.gui">HTMLDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MessageDialog.html#keyTyped-java.awt.event.KeyEvent-">keyTyped(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/MessageDialog.html" title="class in ij.gui">MessageDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/SaveChangesDialog.html#keyTyped-java.awt.event.KeyEvent-">keyTyped(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/SaveChangesDialog.html" title="class in ij.gui">SaveChangesDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/WaitForUserDialog.html#keyTyped-java.awt.event.KeyEvent-">keyTyped(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/WaitForUserDialog.html" title="class in ij.gui">WaitForUserDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/YesNoCancelDialog.html#keyTyped-java.awt.event.KeyEvent-">keyTyped(KeyEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui">YesNoCancelDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#keyTyped-java.awt.event.KeyEvent-">keyTyped(KeyEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#keyTyped-java.awt.event.KeyEvent-">keyTyped(KeyEvent)</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#keyTyped-java.awt.event.KeyEvent-">keyTyped(KeyEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#keyTyped-java.awt.event.KeyEvent-">keyTyped(KeyEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Fitter.html#keyTyped-java.awt.event.KeyEvent-">keyTyped(KeyEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Fitter.html" title="class in ij.plugin.frame">Fitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#keyTyped-java.awt.event.KeyEvent-">keyTyped(KeyEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#keyTyped-java.awt.event.KeyEvent-">keyTyped(KeyEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#keywordIDs">keywordIDs</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#keywords">keywords</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#killRoi--">killRoi()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Deletes the current region of interest.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#killStack--">killStack()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#KURTOSIS">KURTOSIS</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#KURTOSIS">KURTOSIS</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#kurtosis">kurtosis</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
</dl>
<a name="I:L">
<!-- -->
</a>
<h2 class="title">L</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/gui/MessageDialog.html#label">label</a></span> - Variable in class ij.gui.<a href="ij/gui/MessageDialog.html" title="class in ij.gui">MessageDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/WaitForUserDialog.html#label">label</a></span> - Variable in class ij.gui.<a href="ij/gui/WaitForUserDialog.html" title="class in ij.gui">WaitForUserDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Filler.html#label-ij.process.ImageProcessor-">label(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Filler.html" title="class in ij.plugin.filter">Filler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackMaker.html#labelHyperstack-ij.ImagePlus-">labelHyperstack(ImagePlus)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/HyperStackMaker.html" title="class in ij.plugin">HyperStackMaker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#LABELS">LABELS</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#LABtoRGB-double-double-double-">LABtoRGB(double, double, double)</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">Convert LAB to RGB.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#LABtoRGB-double:A-">LABtoRGB(double[])</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#LabToRGB-ij.ImagePlus-">LabToRGB(ImagePlus)</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">Converts a Lab stack into an RGB image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#LABtoXYZ-double-double-double-">LABtoXYZ(double, double, double)</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">Convert LAB to XYZ.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#LABtoXYZ-double:A-">LABtoXYZ(double[])</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">Convert LAB to XYZ.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#LAST_HEADING">LAST_HEADING</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#LAST_INDEX_OF">LAST_INDEX_OF</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#lastZoomSX">lastZoomSX</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Screen coordinates where the last zoom operation was done (initialized to impossible value)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#lastZoomSY">lastZoomSY</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageLayout.html#layoutContainer-java.awt.Container-">layoutContainer(Container)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageLayout.html" title="class in ij.gui">ImageLayout</a></dt>
<dd>
<div class="block">Lays out the container and calls ImageCanvas.resizeCanvas()
to adjust the image canvas size as needed.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#LEFT">LEFT</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Text justification.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#LEFT">LEFT</a></span> - Static variable in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#LEFT">LEFT</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#LEFT_JUSTIFY">LEFT_JUSTIFY</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Left justify text.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#LEFT_MARGIN">LEFT_MARGIN</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">Not a fixed value any more, use getDrawingFrame() to get the drawing area</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Wand.html#LEGACY_MODE">LEGACY_MODE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Wand.html" title="class in ij.gui">Wand</a></dt>
<dd>
<div class="block">Wand operation type similar to that of ImageJ 1.42p and before; for backwards
compatibility.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotDialog.html#LEGEND">LEGEND</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotDialog.html" title="class in ij.gui">PlotDialog</a></dt>
<dd>
<div class="block">types of dialog</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#LEGEND_BOTTOM_UP">LEGEND_BOTTOM_UP</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Legend has its curves in bottom-to-top sequence (otherwise top to bottom)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#LEGEND_TRANSPARENT">LEGEND_TRANSPARENT</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Legend erases background (otherwise transparent)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#LENGTH_OF">LENGTH_OF</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#LIMIT">LIMIT</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><a href="ij/gui/Line.html" title="class in ij.gui"><span class="typeNameLink">Line</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This class represents a straight line selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#Line-int-int-int-int-">Line(int, int, int, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd>
<div class="block">Creates a new straight line selection using the specified
starting and ending offscreen integer coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#Line-double-double-double-double-">Line(double, double, double, double)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd>
<div class="block">Creates a new straight line selection using the specified
starting and ending offscreen double coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#Line-int-int-ij.ImagePlus-">Line(int, int, ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd>
<div class="block">Starts the process of creating a new user-generated straight line
selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#Line-int-int-int-int-ij.ImagePlus-">Line(int, int, int, int, ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by Line(int, int, int, int)</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#LINE">LINE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Connect points with solid lines.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#LINE">LINE</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Connect points with solid lines.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#LINE">LINE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#LINE">LINE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><a href="ij/gui/Line.PointIterator.html" title="class in ij.gui"><span class="typeNameLink">Line.PointIterator</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">Dedicated point iterator for thin lines.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#LINE_TO">LINE_TO</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#lineCircleIntersection-double-double-double-double-double-double-double-boolean-">lineCircleIntersection(double, double, double, double, double, double, double, boolean)</a></span> - Static method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">
Calculates intersections of a line segment with a circle
Author N.Vischer
ax, ay, bx, by: points A and B of line segment
cx, cy, rad: Circle center and radius.</div>
</dd>
<dt><a href="ij/plugin/filter/LineGraphAnalyzer.html" title="class in ij.plugin.filter"><span class="typeNameLink">LineGraphAnalyzer</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">Implements ImageJ's Analyze/Tools/Analyze Line Graph command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/LineGraphAnalyzer.html#LineGraphAnalyzer--">LineGraphAnalyzer()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/LineGraphAnalyzer.html" title="class in ij.plugin.filter">LineGraphAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#lineTo-int-int-">lineTo(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Draws a line from the current drawing location to (x2,y2).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Selection.html#lineToArea-ij.gui.Roi-">lineToArea(Roi)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Selection.html" title="class in ij.plugin">Selection</a></dt>
<dd>
<div class="block">Converts a line selection into an area selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#lineWidth">lineWidth</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#lineWidth">lineWidth</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/frame/LineWidthAdjuster.html" title="class in ij.plugin.frame"><span class="typeNameLink">LineWidthAdjuster</span></a> - Class in <a href="ij/plugin/frame/package-summary.html">ij.plugin.frame</a></dt>
<dd>
<div class="block">Adjusts the width of line selections.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/LineWidthAdjuster.html#LineWidthAdjuster--">LineWidthAdjuster()</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/LineWidthAdjuster.html" title="class in ij.plugin.frame">LineWidthAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#list">list</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#LIST">LIST</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#LIST">LIST</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd>
<div class="block">Do not create an image, just list x, y of maxima in the Results table</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ThreadLister.html#listAllThreads-java.io.PrintWriter-">listAllThreads(PrintWriter)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/ThreadLister.html" title="class in ij.plugin">ThreadLister</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandLister.html#listCommands--">listCommands()</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandLister.html" title="class in ij.plugin">CommandLister</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/OverlayCommands.html#listRois-ij.gui.Roi:A-">listRois(Roi[])</a></span> - Static method in class ij.plugin.<a href="ij/plugin/OverlayCommands.html" title="class in ij.plugin">OverlayCommands</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandLister.html#listShortcuts--">listShortcuts()</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandLister.html" title="class in ij.plugin">CommandLister</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#listValues">listValues</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Display the XY coordinates in a separate window.</div>
</dd>
<dt><a href="ij/plugin/ListVirtualStack.html" title="class in ij.plugin"><span class="typeNameLink">ListVirtualStack</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin opens images specified by list of file paths as a virtual stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ListVirtualStack.html#ListVirtualStack--">ListVirtualStack()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ListVirtualStack.html" title="class in ij.plugin">ListVirtualStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#live">live</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#ln--">ln()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Does a natural logarithmic (base e) transform of the image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#load-java.lang.Object-java.applet.Applet-">load(Object, Applet)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Finds and loads the ImageJ configuration file, "IJ_Props.txt".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#load-java.io.BufferedReader-">load(BufferedReader)</a></span> - Method in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd>
<div class="block">Appends the text in the specified file to the end of this TextWindow.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Executer.html#loadLut-java.lang.String-">loadLut(String)</a></span> - Static method in class ij.<a href="ij/Executer.html" title="class in ij">Executer</a></dt>
<dd>
<div class="block">Opens a .lut file from the ImageJ/luts directory and returns 'true' if successful.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/OtherInstance.html#loadPrefs--">loadPrefs()</a></span> - Static method in class ij.<a href="ij/OtherInstance.html" title="class in ij">OtherInstance</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ContrastAdjuster.html#LOC_KEY">LOC_KEY</a></span> - Static variable in class ij.plugin.frame.<a href="ij/plugin/frame/ContrastAdjuster.html" title="class in ij.plugin.frame">ContrastAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/LineWidthAdjuster.html#LOC_KEY">LOC_KEY</a></span> - Static variable in class ij.plugin.frame.<a href="ij/plugin/frame/LineWidthAdjuster.html" title="class in ij.plugin.frame">LineWidthAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#LOC_KEY">LOC_KEY</a></span> - Static variable in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#LOC_KEY">LOC_KEY</a></span> - Static variable in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#LOC_KEY">LOC_KEY</a></span> - Static variable in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#lock--">lock()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Locks the image so other threads can test to see if it
is in use.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#locked">locked</a></span> - Variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#lockSilently--">lockSilently()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Similar to lock, but doesn't beep and display an error
message if the attempt to lock the image fails.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#log">log</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#log-java.lang.String-">log(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#LOG">LOG</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#LOG">LOG</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#LOG">LOG</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#log--">log()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#log--">log()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Does a natural logarithmic (base e) transform of the image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#log--">log()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#LOG2">LOG2</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#LOG2">LOG2</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#LOG_HEIGHT_KEY">LOG_HEIGHT_KEY</a></span> - Static variable in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#LOG_LOC_KEY">LOG_LOC_KEY</a></span> - Static variable in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#LOG_WIDTH_KEY">LOG_WIDTH_KEY</a></span> - Static variable in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJEventListener.html#LOG_WINDOW_CLOSED">LOG_WINDOW_CLOSED</a></span> - Static variable in interface ij.<a href="ij/IJEventListener.html" title="interface in ij">IJEventListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#LOGICAL_AND">LOGICAL_AND</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#LOGICAL_OR">LOGICAL_OR</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ProxySettings.html#logProperties--">logProperties()</a></span> - Method in class ij.plugin.<a href="ij/plugin/ProxySettings.html" title="class in ij.plugin">ProxySettings</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#logScale">logScale</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><a href="ij/io/LogStream.html" title="class in ij.io"><span class="typeNameLink">LogStream</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">This class provides the functionality to divert output sent to the System.out
and System.err streams to ImageJ's log console.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/LogStream.html#LogStream--">LogStream()</a></span> - Constructor for class ij.io.<a href="ij/io/LogStream.html" title="class in ij.io">LogStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#longHistogram">longHistogram</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Long histogram; use getHIstogram() to retrieve.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#longOffset">longOffset</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#longPixelCount">longPixelCount</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Long pixel count</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/OpenDialog.html#lookupPathVariable-java.lang.String-">lookupPathVariable(String)</a></span> - Static method in class ij.io.<a href="ij/io/OpenDialog.html" title="class in ij.io">OpenDialog</a></dt>
<dd> </dd>
<dt><a href="ij/LookUpTable.html" title="class in ij"><span class="typeNameLink">LookUpTable</span></a> - Class in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">This class represents a color look-up table.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/LookUpTable.html#LookUpTable-java.awt.Image-">LookUpTable(Image)</a></span> - Constructor for class ij.<a href="ij/LookUpTable.html" title="class in ij">LookUpTable</a></dt>
<dd>
<div class="block">Constructs a LookUpTable object from an AWT Image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/LookUpTable.html#LookUpTable-java.awt.image.ColorModel-">LookUpTable(ColorModel)</a></span> - Constructor for class ij.<a href="ij/LookUpTable.html" title="class in ij">LookUpTable</a></dt>
<dd>
<div class="block">Constructs a LookUpTable object from a ColorModel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#loop">loop</a></span> - Variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#lostOwnership-java.awt.datatransfer.Clipboard-java.awt.datatransfer.Transferable-">lostOwnership(Clipboard, Transferable)</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#lostOwnership-java.awt.datatransfer.Clipboard-java.awt.datatransfer.Transferable-">lostOwnership(Clipboard, Transferable)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#lostOwnership-java.awt.datatransfer.Clipboard-java.awt.datatransfer.Transferable-">lostOwnership(Clipboard, Transferable)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Fitter.html#lostOwnership-java.awt.datatransfer.Clipboard-java.awt.datatransfer.Transferable-">lostOwnership(Clipboard, Transferable)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Fitter.html" title="class in ij.plugin.frame">Fitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#lostOwnership-java.awt.datatransfer.Clipboard-java.awt.datatransfer.Transferable-">lostOwnership(Clipboard, Transferable)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#lowerThreshold">lowerThreshold</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Minimum threshold when "Limit to threshold" enabled</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#LT">LT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#LTE">LTE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#lut">lut</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#LUT">LUT</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><a href="ij/process/LUT.html" title="class in ij.process"><span class="typeNameLink">LUT</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This is an indexed color model that allows an
lower and upper bound to be specified.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/LUT.html#LUT-byte:A-byte:A-byte:A-">LUT(byte[], byte[], byte[])</a></span> - Constructor for class ij.process.<a href="ij/process/LUT.html" title="class in ij.process">LUT</a></dt>
<dd>
<div class="block">Constructs a LUT from red, green and blue byte arrays, which must have a length of 256.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/LUT.html#LUT-int-int-byte:A-byte:A-byte:A-">LUT(int, int, byte[], byte[], byte[])</a></span> - Constructor for class ij.process.<a href="ij/process/LUT.html" title="class in ij.process">LUT</a></dt>
<dd>
<div class="block">Constructs a LUT from red, green and blue byte arrays, where 'bits'
must be 8 and 'size' must be less than or equal to 256.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/LUT.html#LUT-java.awt.image.IndexColorModel-double-double-">LUT(IndexColorModel, double, double)</a></span> - Constructor for class ij.process.<a href="ij/process/LUT.html" title="class in ij.process">LUT</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/LUT_Editor.html" title="class in ij.plugin"><span class="typeNameLink">LUT_Editor</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/LUT_Editor.html#LUT_Editor--">LUT_Editor()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/LUT_Editor.html" title="class in ij.plugin">LUT_Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#lutAnimation">lutAnimation</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/LutApplier.html" title="class in ij.plugin.filter"><span class="typeNameLink">LutApplier</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This plugin implements the Image/Lookup Tables/Apply LUT command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/LutApplier.html#LutApplier--">LutApplier()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/LutApplier.html" title="class in ij.plugin.filter">LutApplier</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/LutLoader.html" title="class in ij.plugin"><span class="typeNameLink">LutLoader</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Opens NIH Image look-up tables (LUTs), 768 byte binary LUTs
(256 reds, 256 greens and 256 blues), LUTs in text format,
or generates the LUT specified by the string argument
passed to the run() method.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/LutLoader.html#LutLoader--">LutLoader()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/LutLoader.html" title="class in ij.plugin">LutLoader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#lutMessage">lutMessage</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#lutSize">lutSize</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#lutUpdateMode">lutUpdateMode</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/LutViewer.html" title="class in ij.plugin.filter"><span class="typeNameLink">LutViewer</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">Displays the active image's look-up table.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/LutViewer.html#LutViewer--">LutViewer()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/LutViewer.html" title="class in ij.plugin.filter">LutViewer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#LZW">LZW</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#LZW_WITH_DIFFERENCING">LZW_WITH_DIFFERENCING</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/ImageReader.html#lzwUncompress-byte:A-">lzwUncompress(byte[])</a></span> - Method in class ij.io.<a href="ij/io/ImageReader.html" title="class in ij.io">ImageReader</a></dt>
<dd>
<div class="block">Utility method for decoding an LZW-compressed image strip.</div>
</dd>
</dl>
<a name="I:M">
<!-- -->
</a>
<h2 class="title">M</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#M">M</a></span> - Variable in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">sRGB to XYZ conversion matrix</div>
</dd>
<dt><a href="ij/Macro.html" title="class in ij"><span class="typeNameLink">Macro</span></a> - Class in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">The class contains static methods that perform macro operations.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Macro.html#Macro--">Macro()</a></span> - Constructor for class ij.<a href="ij/Macro.html" title="class in ij">Macro</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MACRO">MACRO</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NewPlugin.html#MACRO">MACRO</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/NewPlugin.html" title="class in ij.plugin">NewPlugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Undo.html#MACRO">MACRO</a></span> - Static variable in class ij.<a href="ij/Undo.html" title="class in ij">Undo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Macro.html#MACRO_CANCELED">MACRO_CANCELED</a></span> - Static variable in class ij.<a href="ij/Macro.html" title="class in ij">Macro</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ImageMath.html#MACRO_KEY">MACRO_KEY</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ImageMath.html" title="class in ij.plugin.filter">ImageMath</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Macro_Runner.html" title="class in ij.plugin"><span class="typeNameLink">Macro_Runner</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This class runs macros and scripts installed in the Plugins menu as well as
macros and scripts opened using the Plugins/Macros/Run command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Macro_Runner.html#Macro_Runner--">Macro_Runner()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Macro_Runner.html" title="class in ij.plugin">Macro_Runner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NewPlugin.html#MACRO_TOOL">MACRO_TOOL</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/NewPlugin.html" title="class in ij.plugin">NewPlugin</a></dt>
<dd> </dd>
<dt><a href="ij/macro/MacroConstants.html" title="interface in ij.macro"><span class="typeNameLink">MacroConstants</span></a> - Interface in <a href="ij/macro/package-summary.html">ij.macro</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Program.html#macroCount--">macroCount()</a></span> - Method in class ij.macro.<a href="ij/macro/Program.html" title="class in ij.macro">Program</a></dt>
<dd> </dd>
<dt><a href="ij/macro/MacroExtension.html" title="interface in ij.macro"><span class="typeNameLink">MacroExtension</span></a> - Interface in <a href="ij/macro/package-summary.html">ij.macro</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin"><span class="typeNameLink">MacroInstaller</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Plugins/Macros/Install Macros command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#MacroInstaller--">MacroInstaller()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><a href="ij/macro/MacroRunner.html" title="class in ij.macro"><span class="typeNameLink">MacroRunner</span></a> - Class in <a href="ij/macro/package-summary.html">ij.macro</a></dt>
<dd>
<div class="block">This class runs macros in a separate thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroRunner.html#MacroRunner--">MacroRunner()</a></span> - Constructor for class ij.macro.<a href="ij/macro/MacroRunner.html" title="class in ij.macro">MacroRunner</a></dt>
<dd>
<div class="block">Create a MacrRunner.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroRunner.html#MacroRunner-java.lang.String-">MacroRunner(String)</a></span> - Constructor for class ij.macro.<a href="ij/macro/MacroRunner.html" title="class in ij.macro">MacroRunner</a></dt>
<dd>
<div class="block">Create a new object that interprets macro source in a separate thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroRunner.html#MacroRunner-java.lang.String-ij.plugin.frame.Editor-">MacroRunner(String, Editor)</a></span> - Constructor for class ij.macro.<a href="ij/macro/MacroRunner.html" title="class in ij.macro">MacroRunner</a></dt>
<dd>
<div class="block">Create a new object that interprets macro source in debug mode if 'editor' is not null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroRunner.html#MacroRunner-java.lang.String-java.lang.String-">MacroRunner(String, String)</a></span> - Constructor for class ij.macro.<a href="ij/macro/MacroRunner.html" title="class in ij.macro">MacroRunner</a></dt>
<dd>
<div class="block">Create a new object that interprets macro source in a
separate thread, and also passing a string argument.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroRunner.html#MacroRunner-java.io.File-">MacroRunner(File)</a></span> - Constructor for class ij.macro.<a href="ij/macro/MacroRunner.html" title="class in ij.macro">MacroRunner</a></dt>
<dd>
<div class="block">Create a new object that interprets a macro file using a separate thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroRunner.html#MacroRunner-ij.macro.Program-int-java.lang.String-">MacroRunner(Program, int, String)</a></span> - Constructor for class ij.macro.<a href="ij/macro/MacroRunner.html" title="class in ij.macro">MacroRunner</a></dt>
<dd>
<div class="block">Create a new object that runs a tokenized macro in a separate thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroRunner.html#MacroRunner-ij.macro.Program-int-java.lang.String-java.lang.String-">MacroRunner(Program, int, String, String)</a></span> - Constructor for class ij.macro.<a href="ij/macro/MacroRunner.html" title="class in ij.macro">MacroRunner</a></dt>
<dd>
<div class="block">Create a new object that runs a tokenized macro in a separate thread,
passing a string argument.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroRunner.html#MacroRunner-ij.macro.Program-int-java.lang.String-ij.plugin.frame.Editor-">MacroRunner(Program, int, String, Editor)</a></span> - Constructor for class ij.macro.<a href="ij/macro/MacroRunner.html" title="class in ij.macro">MacroRunner</a></dt>
<dd>
<div class="block">Create a new object that runs a tokenized macro in debug mode if 'editor' is not null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#macroRunning--">macroRunning()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if the run(), open() or newImage() method is executing.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#MACROS_MENU_ITEMS">MACROS_MENU_ITEMS</a></span> - Static variable in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/tool/MacroToolRunner.html" title="class in ij.plugin.tool"><span class="typeNameLink">MacroToolRunner</span></a> - Class in <a href="ij/plugin/tool/package-summary.html">ij.plugin.tool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/MacroToolRunner.html#MacroToolRunner-ij.plugin.MacroInstaller-">MacroToolRunner(MacroInstaller)</a></span> - Constructor for class ij.plugin.tool.<a href="ij/plugin/tool/MacroToolRunner.html" title="class in ij.plugin.tool">MacroToolRunner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#mag">mag</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#magnification">magnification</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#magnification">magnification</a></span> - Variable in class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#MAGNIFIER">MAGNIFIER</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#main-java.lang.String:A-">main(String[])</a></span> - Static method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#MAJOR">MAJOR</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/EllipseFitter.html#major">major</a></span> - Variable in class ij.process.<a href="ij/process/EllipseFitter.html" title="class in ij.process">EllipseFitter</a></dt>
<dd>
<div class="block">Length of major axis</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#major">major</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Length of major axis of fitted ellipse</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#make16bitEDM-ij.process.ImageProcessor-">make16bitEDM(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">Calculates a 16-bit grayscale Euclidean Distance Map for a binary 8-bit image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MAKE_ARROW">MAKE_ARROW</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MAKE_ELLIPSE">MAKE_ELLIPSE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MAKE_LINE">MAKE_LINE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MAKE_OVAL">MAKE_OVAL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MAKE_POINT">MAKE_POINT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MAKE_POLYGON">MAKE_POLYGON</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MAKE_RECTANGLE">MAKE_RECTANGLE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MAKE_ROTATED_RECT">MAKE_ROTATED_RECT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MAKE_SELECTION">MAKE_SELECTION</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MAKE_TEXT">MAKE_TEXT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CompositeConverter.html#makeComposite-ij.ImagePlus-">makeComposite(ImagePlus)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/CompositeConverter.html" title="class in ij.plugin">CompositeConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#makeDefaultColorModel--">makeDefaultColorModel()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/OtherInstance.html#makeFilePrivate-java.lang.String-">makeFilePrivate(String)</a></span> - Static method in class ij.<a href="ij/OtherInstance.html" title="class in ij">OtherInstance</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#makeFloatEDM-ij.process.ImageProcessor-int-boolean-">makeFloatEDM(ImageProcessor, int, boolean)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">Creates the Euclidian Distance Map of a (binary) byte image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/GaussianBlur.html#makeGaussianKernel-double-double-int-">makeGaussianKernel(double, double, int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/GaussianBlur.html" title="class in ij.plugin.filter">GaussianBlur</a></dt>
<dd>
<div class="block">Create a 1-dimensional normalized Gaussian kernel with standard deviation sigma
and the running sum over the kernel
Note: this is one side of the kernel only, not the full kernel as used by the
Convolver class of ImageJ.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#makeHighResolution-java.lang.String-float-boolean-boolean-">makeHighResolution(String, float, boolean, boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Creates a new high-resolution plot by scaling it and displays that plot if showIt is true.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#makeKernel-double-">makeKernel(double)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">Not needed any more, use the rank(ip, ...) method, which creates the kernel</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#makeLine-int-int-int-int-">makeLine(int, int, int, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Creates a straight line selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#makeLine-double-double-double-double-">makeLine(double, double, double, double)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Creates a straight line selection using floating point coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#makeLineRadii-double-">makeLineRadii(double)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd>
<div class="block">Create a circular kernel (structuring element) of a given radius.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Filler.html#makeMask-ij.process.ImageProcessor-java.awt.Rectangle-">makeMask(ImageProcessor, Rectangle)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Filler.html" title="class in ij.plugin.filter">Filler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MontageMaker.html#makeMontage-ij.ImagePlus-">makeMontage(ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MontageMaker.html" title="class in ij.plugin">MontageMaker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MontageMaker.html#makeMontage-ij.ImagePlus-int-int-double-int-int-int-int-boolean-">makeMontage(ImagePlus, int, int, double, int, int, int, int, boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MontageMaker.html" title="class in ij.plugin">MontageMaker</a></dt>
<dd>
<div class="block">Creates a montage and displays it.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MontageMaker.html#makeMontage2-ij.ImagePlus-int-int-double-int-int-int-int-boolean-">makeMontage2(ImagePlus, int, int, double, int, int, int, int, boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MontageMaker.html" title="class in ij.plugin">MontageMaker</a></dt>
<dd>
<div class="block">Creates a montage and returns it as an ImagePlus.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#makeOval-int-int-int-int-">makeOval(int, int, int, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Creates an oval selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#makeOval-double-double-double-double-">makeOval(double, double, double, double)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Creates an subpixel resolution oval selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#makePoint-int-int-">makePoint(int, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Creates a point selection using integer coordinates..</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#makePoint-double-double-">makePoint(double, double)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Creates a point selection using floating point coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#makeRectangle-int-int-int-int-">makeRectangle(int, int, int, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Creates a rectangular selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#makeRectangle-double-double-double-double-">makeRectangle(double, double, double, double)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Creates a subpixel resolution rectangular selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/EllipseFitter.html#makeRoi-ij.process.ImageProcessor-">makeRoi(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/EllipseFitter.html" title="class in ij.process">EllipseFitter</a></dt>
<dd>
<div class="block">Generates the xCoordinates, yCoordinates public arrays
that can be used to create an ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#makeRow-java.lang.String-ij.plugin.CommandFinder.CommandAction-">makeRow(String, CommandFinder.CommandAction)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AVI_Reader.html#makeStack-java.lang.String-int-int-boolean-boolean-boolean-">makeStack(String, int, int, boolean, boolean, boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/AVI_Reader.html" title="class in ij.plugin">AVI_Reader</a></dt>
<dd>
<div class="block">Create an ImageStack from an avi file with given path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackMaker.html#makeStack-ij.process.ImageProcessor-int-int-int-">makeStack(ImageProcessor, int, int, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackMaker.html" title="class in ij.plugin">StackMaker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/SubHyperstackMaker.html#makeSubhyperstack-ij.ImagePlus-java.lang.String-java.lang.String-java.lang.String-">makeSubhyperstack(ImagePlus, String, String, String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/SubHyperstackMaker.html" title="class in ij.plugin">SubHyperstackMaker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/SubHyperstackMaker.html#makeSubhyperstack-ij.ImagePlus-java.util.List-java.util.List-java.util.List-">makeSubhyperstack(ImagePlus, List<Integer>, List<Integer>, List<Integer>)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/SubHyperstackMaker.html" title="class in ij.plugin">SubHyperstackMaker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/SubstackMaker.html#makeSubstack-ij.ImagePlus-java.lang.String-">makeSubstack(ImagePlus, String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/SubstackMaker.html" title="class in ij.plugin">SubstackMaker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/SurfacePlotter.html#makeSurfacePlot-ij.process.ImageProcessor-">makeSurfacePlot(ImageProcessor)</a></span> - Method in class ij.plugin.<a href="ij/plugin/SurfacePlotter.html" title="class in ij.plugin">SurfacePlotter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#makeThumbnail-int-int-double-">makeThumbnail(int, int, double)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Uses averaging to creates a new ColorProcessor containing
a downsized copy of this image or selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#makeUniqueName-java.lang.String-">makeUniqueName(String)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">If 'name' is not unique, adds -1, -2, etc.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#markWidth">markWidth</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#MASKS">MASKS</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#maskSizeError-ij.process.ImageProcessor-">maskSizeError(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/WildcardMatch.html#match-java.lang.String-java.lang.String-">match(String, String)</a></span> - Method in class ij.util.<a href="ij/util/WildcardMatch.html" title="class in ij.util">WildcardMatch</a></dt>
<dd>
<div class="block">Matches a string against a pattern with wildcards.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MATCHES">MATCHES</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/ImageReader.html#max">max</a></span> - Variable in class ij.io.<a href="ij/io/ImageReader.html" title="class in ij.io">ImageReader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#MAX">MAX</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Binner.html#MAX">MAX</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Binner.html" title="class in ij.plugin">Binner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#MAX">MAX</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Filters3D.html#MAX">MAX</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Filters3D.html" title="class in ij.plugin">Filters3D</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#MAX">MAX</a></span> - Static variable in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">dst=max(dst,src)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#max-double-">max(double)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#MAX">MAX</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#max-double-">max(double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Pixels greater than 'value' are set to 'value'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#max">max</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/LUT.html#max">max</a></span> - Variable in class ij.process.<a href="ij/process/LUT.html" title="class in ij.process">LUT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#max-double-">max(double)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#MAX_CHANNELS">MAX_CHANNELS</a></span> - Static variable in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#MAX_COLUMNS">MAX_COLUMNS</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Obsolete; use getLastColumn().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#MAX_COUNTERS">MAX_COUNTERS</a></span> - Static variable in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#MAX_ITERATIONS_EXCEEDED">MAX_ITERATIONS_EXCEEDED</a></span> - Static variable in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Status returned: no convergence detected after maximum iteration count</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#MAX_MACROS">MAX_MACROS</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#MAX_METHOD">MAX_METHOD</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#MAX_MOUSEMOVE_ZOOM">MAX_MOUSEMOVE_ZOOM</a></span> - Static variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">If the mouse moves less than this in screen pixels, successive zoom operations are on the same image pixel</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MAX_OF">MAX_OF</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#MAX_OPEN_RECENT_ITEMS">MAX_OPEN_RECENT_ITEMS</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#MAX_RESTARTS_EXCEEDED">MAX_RESTARTS_EXCEEDED</a></span> - Static variable in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Status returned: not two equal solutions after maximum number of restarts</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#MAX_SIZE">MAX_SIZE</a></span> - Static variable in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#MAX_SIZE">MAX_SIZE</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#MAX_STANDARDS">MAX_STANDARDS</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd>
<div class="block">Maximum number of calibration standard (20)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#MAX_THRESHOLD">MAX_THRESHOLD</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#maxCount">maxCount</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Concatenator.html#maxEntries">maxEntries</a></span> - Variable in class ij.plugin.<a href="ij/plugin/Concatenator.html" title="class in ij.plugin">Concatenator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#maximize--">maximize()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter"><span class="typeNameLink">MaximumFinder</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This ImageJ plug-in filter finds the maxima (or minima) of an image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#MaximumFinder--">MaximumFinder()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Filters3D.html#MAXLOCAL">MAXLOCAL</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Filters3D.html" title="class in ij.plugin">Filters3D</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#maxMemory--">maxMemory()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns the maximum amount of memory available to ImageJ or
zero if ImageJ is unable to determine this limit.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Memory.html#maxMemory--">maxMemory()</a></span> - Method in class ij.plugin.<a href="ij/plugin/Memory.html" title="class in ij.plugin">Memory</a></dt>
<dd>
<div class="block">Returns the maximum amount of memory this JVM will attempt to use.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#maxPoints">maxPoints</a></span> - Variable in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#maxThreshold">maxThreshold</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#maxValue--">maxValue()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Returns the largest possible positive finite pixel value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#maxValue--">maxValue()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the maximum possible pixel value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#maxValue--">maxValue()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Returns the maximum possible pixel value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#MEAN">MEAN</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#MEAN">MEAN</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#MEAN">MEAN</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Filters3D.html#MEAN">MEAN</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Filters3D.html" title="class in ij.plugin">Filters3D</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#mean">mean</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MultiLineLabel.html#measure--">measure()</a></span> - Method in class ij.gui.<a href="ij/gui/MultiLineLabel.html" title="class in ij.gui">MultiLineLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#measure-ij.ImagePlus-">measure(ImagePlus)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Measures the ROIs in this overlay on the specified image
and returns the results as a ResultsTable.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#measure--">measure()</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Measures the image or selection and adds the results to the default results table.</div>
</dd>
<dt><a href="ij/measure/Measurements.html" title="interface in ij.measure"><span class="typeNameLink">Measurements</span></a> - Interface in <a href="ij/measure/package-summary.html">ij.measure</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/MeasurementsWriter.html" title="class in ij.plugin"><span class="typeNameLink">MeasurementsWriter</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Writes measurements to a csv or tab-delimited text file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MeasurementsWriter.html#MeasurementsWriter--">MeasurementsWriter()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/MeasurementsWriter.html" title="class in ij.plugin">MeasurementsWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#MEDIAN">MEDIAN</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#MEDIAN">MEDIAN</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Binner.html#MEDIAN">MEDIAN</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Binner.html" title="class in ij.plugin">Binner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#MEDIAN">MEDIAN</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Filters3D.html#MEDIAN">MEDIAN</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Filters3D.html" title="class in ij.plugin">Filters3D</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#median">median</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#MEDIAN_FILTER">MEDIAN_FILTER</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#MEDIAN_METHOD">MEDIAN_METHOD</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd> </dd>
<dt><a href="ij/process/MedianCut.html" title="class in ij.process"><span class="typeNameLink">MedianCut</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">Converts an RGB image to 8-bit index color using Heckbert's median-cut
color quantization algorithm.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/MedianCut.html#MedianCut-int:A-int-int-">MedianCut(int[], int, int)</a></span> - Constructor for class ij.process.<a href="ij/process/MedianCut.html" title="class in ij.process">MedianCut</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/MedianCut.html#MedianCut-ij.process.ColorProcessor-">MedianCut(ColorProcessor)</a></span> - Constructor for class ij.process.<a href="ij/process/MedianCut.html" title="class in ij.process">MedianCut</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#medianFilter--">medianFilter()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#medianFilter--">medianFilter()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#medianFilter--">medianFilter()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Not implemented.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#medianFilter--">medianFilter()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">A 3x3 median filter.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#medianFilter--">medianFilter()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Not implemented.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/ArrayUtil.html#medianSort--">medianSort()</a></span> - Method in class ij.util.<a href="ij/util/ArrayUtil.html" title="class in ij.util">ArrayUtil</a></dt>
<dd>
<div class="block">The median (sorted array)</div>
</dd>
<dt><a href="ij/plugin/Memory.html" title="class in ij.plugin"><span class="typeNameLink">Memory</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Edit/Options/Memory command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Memory.html#Memory--">Memory()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Memory.html" title="class in ij.plugin">Memory</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/frame/MemoryMonitor.html" title="class in ij.plugin.frame"><span class="typeNameLink">MemoryMonitor</span></a> - Class in <a href="ij/plugin/frame/package-summary.html">ij.plugin.frame</a></dt>
<dd>
<div class="block">This plugin continuously plots ImageJ's memory utilization.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/MemoryMonitor.html#MemoryMonitor--">MemoryMonitor()</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/MemoryMonitor.html" title="class in ij.plugin.frame">MemoryMonitor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#MENU_BAR">MENU_BAR</a></span> - Static variable in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#MENU_SIZE">MENU_SIZE</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><a href="ij/Menus.html" title="class in ij"><span class="typeNameLink">Menus</span></a> - Class in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">This class installs and updates ImageJ's menus.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RGBStackMerge.html#mergeChannels-ij.ImagePlus:A-boolean-">mergeChannels(ImagePlus[], boolean)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/RGBStackMerge.html" title="class in ij.plugin">RGBStackMerge</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RGBStackMerge.html#mergeHyperstacks-ij.ImagePlus:A-boolean-">mergeHyperstacks(ImagePlus[], boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RGBStackMerge.html" title="class in ij.plugin">RGBStackMerge</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RGBStackMerge.html#mergeStacks--">mergeStacks()</a></span> - Method in class ij.plugin.<a href="ij/plugin/RGBStackMerge.html" title="class in ij.plugin">RGBStackMerge</a></dt>
<dd>
<div class="block">Combines up to seven grayscale stacks into one RGB or composite stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RGBStackMerge.html#mergeStacks-ij.ImageStack-ij.ImageStack-ij.ImageStack-boolean-">mergeStacks(ImageStack, ImageStack, ImageStack, boolean)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/RGBStackMerge.html" title="class in ij.plugin">RGBStackMerge</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RGBStackMerge.html#mergeStacks-int-int-int-ij.ImageStack-ij.ImageStack-ij.ImageStack-boolean-">mergeStacks(int, int, int, ImageStack, ImageStack, ImageStack, boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RGBStackMerge.html" title="class in ij.plugin">RGBStackMerge</a></dt>
<dd> </dd>
<dt><a href="ij/gui/MessageDialog.html" title="class in ij.gui"><span class="typeNameLink">MessageDialog</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">A modal dialog box that displays information.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/MessageDialog.html#MessageDialog-java.awt.Frame-java.lang.String-java.lang.String-">MessageDialog(Frame, String, String)</a></span> - Constructor for class ij.gui.<a href="ij/gui/MessageDialog.html" title="class in ij.gui">MessageDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#META_DATA">META_DATA</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#META_DATA_BYTE_COUNTS">META_DATA_BYTE_COUNTS</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#metaData">metaData</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#metaDataTypes">metaDataTypes</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#METAMORPH1">METAMORPH1</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#METAMORPH2">METAMORPH2</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Thresholder.html#methods">methods</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Thresholder.html" title="class in ij.plugin">Thresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#METHODS">METHODS</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#Mi">Mi</a></span> - Variable in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">XYZ to sRGB conversion matrix</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#micronSymbol">micronSymbol</a></span> - Static variable in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/ImageReader.html#min">min</a></span> - Variable in class ij.io.<a href="ij/io/ImageReader.html" title="class in ij.io">ImageReader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#MIN">MIN</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Binner.html#MIN">MIN</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Binner.html" title="class in ij.plugin">Binner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#MIN">MIN</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Filters3D.html#MIN">MIN</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Filters3D.html" title="class in ij.plugin">Filters3D</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#MIN">MIN</a></span> - Static variable in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">dst=min(dst,src)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#min-double-">min(double)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#MIN">MIN</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#min-double-">min(double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Pixels less than 'value' are set to 'value'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#min">min</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/LUT.html#min">min</a></span> - Variable in class ij.process.<a href="ij/process/LUT.html" title="class in ij.process">LUT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#min-double-">min(double)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#MIN_FERET">MIN_FERET</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#MIN_FRAMEHEIGHT">MIN_FRAMEHEIGHT</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">minimum width of frame area in plot</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#MIN_FRAMEWIDTH">MIN_FRAMEWIDTH</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">minimum width of frame area in plot</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#MIN_HEIGHT">MIN_HEIGHT</a></span> - Static variable in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#MIN_MAX">MIN_MAX</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#MIN_METHOD">MIN_METHOD</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MIN_OF">MIN_OF</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#MIN_THRESHOLD">MIN_THRESHOLD</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#MIN_WIDTH">MIN_WIDTH</a></span> - Static variable in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#minimize--">minimize()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#minimize-double:A-double:A-">minimize(double[], double[])</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Perform minimization with the gradient-enhanced simplex method once or a few
times, depending on the value of 'restarts'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#minimizeOnce-double:A-double:A-">minimizeOnce(double[], double[])</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Perform minimization with the simplex method once, including re-initialization until
we have a stable solution.</div>
</dd>
<dt><a href="ij/measure/Minimizer.html" title="class in ij.measure"><span class="typeNameLink">Minimizer</span></a> - Class in <a href="ij/measure/package-summary.html">ij.measure</a></dt>
<dd>
<div class="block">Minimizer based on Nelder-Mead simplex method (also known as polytope method),
including the 'outside contraction' as described in:
J.C.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#Minimizer--">Minimizer()</a></span> - Constructor for class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageLayout.html#minimumLayoutSize-java.awt.Container-">minimumLayoutSize(Container)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageLayout.html" title="class in ij.gui">ImageLayout</a></dt>
<dd>
<div class="block">Returns the minimum dimensions for this layout.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#minMaxSet">minMaxSet</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#MINOR">MINOR</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/EllipseFitter.html#minor">minor</a></span> - Variable in class ij.process.<a href="ij/process/EllipseFitter.html" title="class in ij.process">EllipseFitter</a></dt>
<dd>
<div class="block">Length of minor axis</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#minor">minor</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Length of minor axis of fitted ellipse</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#minThreshold">minThreshold</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MINUS_EQUAL">MINUS_EQUAL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MINUS_MINUS">MINUS_MINUS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#minValue--">minValue()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Returns the smallest possible positive nonzero pixel value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#minValue--">minValue()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns the minimum possible pixel value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#MODE">MODE</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#MODE">MODE</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#mode">mode</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Int mode (limited to 2^31-1)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#MODE_KEY">MODE_KEY</a></span> - Static variable in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/RoiListener.html#MODIFIED">MODIFIED</a></span> - Static variable in interface ij.gui.<a href="ij/gui/RoiListener.html" title="interface in ij.gui">RoiListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#modifiers-int-">modifiers(int)</a></span> - Static method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Return the current list of modifier keys.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#MONOSPACED">MONOSPACED</a></span> - Static variable in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/MontageMaker.html" title="class in ij.plugin"><span class="typeNameLink">MontageMaker</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Implements the Image/Stacks/Make Montage command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MontageMaker.html#MontageMaker--">MontageMaker()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/MontageMaker.html" title="class in ij.plugin">MontageMaker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#mouseClicked-java.awt.event.MouseEvent-">mouseClicked(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#mouseClicked-java.awt.event.MouseEvent-">mouseClicked(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#mouseClicked-java.awt.event.MouseEvent-">mouseClicked(MouseEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#mouseClicked-java.awt.event.MouseEvent-">mouseClicked(MouseEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#mouseClicked-java.awt.event.MouseEvent-">mouseClicked(MouseEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#mouseClicked-java.awt.event.MouseEvent-">mouseClicked(MouseEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Propagate mouse clicked events to all synchronized windows.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#mouseClicked-java.awt.event.MouseEvent-">mouseClicked(MouseEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PlugInTool.html#mouseClicked-ij.ImagePlus-java.awt.event.MouseEvent-">mouseClicked(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool">PlugInTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#mouseClicked-java.awt.event.MouseEvent-">mouseClicked(MouseEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#mouseDownInHandle-int-int-int-">mouseDownInHandle(int, int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#mouseDownInHandle-int-int-int-">mouseDownInHandle(int, int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#mouseDownInHandle-int-int-int-">mouseDownInHandle(int, int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#mouseDragged-java.awt.event.MouseEvent-">mouseDragged(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#mouseDragged-java.awt.event.MouseEvent-">mouseDragged(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#mouseDragged-java.awt.event.MouseEvent-">mouseDragged(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#mouseDragged-java.awt.event.MouseEvent-">mouseDragged(MouseEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Propagate mouse dragged events to all synchronized windows.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#mouseDragged-java.awt.event.MouseEvent-">mouseDragged(MouseEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/ArrowTool.html#mouseDragged-ij.ImagePlus-java.awt.event.MouseEvent-">mouseDragged(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/ArrowTool.html" title="class in ij.plugin.tool">ArrowTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/BrushTool.html#mouseDragged-ij.ImagePlus-java.awt.event.MouseEvent-">mouseDragged(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/BrushTool.html" title="class in ij.plugin.tool">BrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/OverlayBrushTool.html#mouseDragged-ij.ImagePlus-java.awt.event.MouseEvent-">mouseDragged(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/OverlayBrushTool.html" title="class in ij.plugin.tool">OverlayBrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PixelInspectionTool.html#mouseDragged-ij.ImagePlus-java.awt.event.MouseEvent-">mouseDragged(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PixelInspectionTool.html" title="class in ij.plugin.tool">PixelInspectionTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PlugInTool.html#mouseDragged-ij.ImagePlus-java.awt.event.MouseEvent-">mouseDragged(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool">PlugInTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/RoiRotationTool.html#mouseDragged-ij.ImagePlus-java.awt.event.MouseEvent-">mouseDragged(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/RoiRotationTool.html" title="class in ij.plugin.tool">RoiRotationTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#mouseDragged-java.awt.event.MouseEvent-">mouseDragged(MouseEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#mouseEntered-java.awt.event.MouseEvent-">mouseEntered(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#mouseEntered-java.awt.event.MouseEvent-">mouseEntered(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#mouseEntered-java.awt.event.MouseEvent-">mouseEntered(MouseEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#mouseEntered-java.awt.event.MouseEvent-">mouseEntered(MouseEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#mouseEntered-java.awt.event.MouseEvent-">mouseEntered(MouseEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#mouseEntered-java.awt.event.MouseEvent-">mouseEntered(MouseEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Propagate mouse entered events to all synchronized windows.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#mouseEntered-java.awt.event.MouseEvent-">mouseEntered(MouseEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PlugInTool.html#mouseEntered-ij.ImagePlus-java.awt.event.MouseEvent-">mouseEntered(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool">PlugInTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#mouseEntered-java.awt.event.MouseEvent-">mouseEntered(MouseEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#mouseExited-java.awt.event.MouseEvent-">mouseExited(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#mouseExited-java.awt.event.MouseEvent-">mouseExited(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">overrides ImageCanvas.mouseExited; removes 'range' arrows</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#mouseExited-java.awt.event.MouseEvent-">mouseExited(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#mouseExited-java.awt.event.MouseEvent-">mouseExited(MouseEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#mouseExited-java.awt.event.MouseEvent-">mouseExited(MouseEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#mouseExited-java.awt.event.MouseEvent-">mouseExited(MouseEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#mouseExited-java.awt.event.MouseEvent-">mouseExited(MouseEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Propagate mouse exited events to all synchronized windows.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#mouseExited-java.awt.event.MouseEvent-">mouseExited(MouseEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PlugInTool.html#mouseExited-ij.ImagePlus-java.awt.event.MouseEvent-">mouseExited(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool">PlugInTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#mouseExited-java.awt.event.MouseEvent-">mouseExited(MouseEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#mouseMoved-int-int-">mouseMoved(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#mouseMoved-java.awt.event.MouseEvent-">mouseMoved(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#mouseMoved-int-int-">mouseMoved(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd>
<div class="block">This method is called by ImageCanvas.mouseMoved(MouseEvent).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#mouseMoved-java.awt.event.MouseEvent-">mouseMoved(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#mouseMoved-int-int-">mouseMoved(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Updates the X and Y values when the mouse is moved and, if appropriate,
shows/hides the overlay with the triangular buttons for changing the axis
range limits Overrides mouseMoved() in ImageWindow.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#mouseMoved-java.awt.event.MouseEvent-">mouseMoved(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#mouseMoved-java.awt.event.MouseEvent-">mouseMoved(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#mouseMoved-java.awt.event.MouseEvent-">mouseMoved(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#mouseMoved-int-int-">mouseMoved(int, int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Displays the cursor coordinates and pixel value in the status bar.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#mouseMoved-java.awt.event.MouseEvent-">mouseMoved(MouseEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Draws the "synchronize" cursor in each of the synchronized
windows.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#mouseMoved-java.awt.event.MouseEvent-">mouseMoved(MouseEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PlugInTool.html#mouseMoved-ij.ImagePlus-java.awt.event.MouseEvent-">mouseMoved(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool">PlugInTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#mouseMoved-java.awt.event.MouseEvent-">mouseMoved(MouseEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#mousePressed-java.awt.event.MouseEvent-">mousePressed(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#mousePressed-java.awt.event.MouseEvent-">mousePressed(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">overrides ImageCanvas.mousePressed: no further processing of clicks on 'range' arrows</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#mousePressed-java.awt.event.MouseEvent-">mousePressed(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#mousePressed-java.awt.event.MouseEvent-">mousePressed(MouseEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#mousePressed-java.awt.event.MouseEvent-">mousePressed(MouseEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#mousePressed-java.awt.event.MouseEvent-">mousePressed(MouseEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#mousePressed-java.awt.event.MouseEvent-">mousePressed(MouseEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Propagate mouse pressed events to all synchronized windows.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#mousePressed-java.awt.event.MouseEvent-">mousePressed(MouseEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/ArrowTool.html#mousePressed-ij.ImagePlus-java.awt.event.MouseEvent-">mousePressed(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/ArrowTool.html" title="class in ij.plugin.tool">ArrowTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/BrushTool.html#mousePressed-ij.ImagePlus-java.awt.event.MouseEvent-">mousePressed(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/BrushTool.html" title="class in ij.plugin.tool">BrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/OverlayBrushTool.html#mousePressed-ij.ImagePlus-java.awt.event.MouseEvent-">mousePressed(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/OverlayBrushTool.html" title="class in ij.plugin.tool">OverlayBrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PixelInspectionTool.html#mousePressed-ij.ImagePlus-java.awt.event.MouseEvent-">mousePressed(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PixelInspectionTool.html" title="class in ij.plugin.tool">PixelInspectionTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PlugInTool.html#mousePressed-ij.ImagePlus-java.awt.event.MouseEvent-">mousePressed(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool">PlugInTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/RoiRotationTool.html#mousePressed-ij.ImagePlus-java.awt.event.MouseEvent-">mousePressed(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/RoiRotationTool.html" title="class in ij.plugin.tool">RoiRotationTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#mousePressed-java.awt.event.MouseEvent-">mousePressed(MouseEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#mouseReleased-java.awt.event.MouseEvent-">mouseReleased(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#mouseReleased-java.awt.event.MouseEvent-">mouseReleased(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">Overrides ImageCanvas.mouseReleased, handles clicks on 'range' arrows</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#mouseReleased-java.awt.event.MouseEvent-">mouseReleased(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#mouseReleased-java.awt.event.MouseEvent-">mouseReleased(MouseEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#mouseReleased-java.awt.event.MouseEvent-">mouseReleased(MouseEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#mouseReleased-java.awt.event.MouseEvent-">mouseReleased(MouseEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#mouseReleased-java.awt.event.MouseEvent-">mouseReleased(MouseEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#mouseReleased-java.awt.event.MouseEvent-">mouseReleased(MouseEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Propagate mouse released events to all synchronized
windows.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#mouseReleased-java.awt.event.MouseEvent-">mouseReleased(MouseEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/ArrowTool.html#mouseReleased-ij.ImagePlus-java.awt.event.MouseEvent-">mouseReleased(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/ArrowTool.html" title="class in ij.plugin.tool">ArrowTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/BrushTool.html#mouseReleased-ij.ImagePlus-java.awt.event.MouseEvent-">mouseReleased(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/BrushTool.html" title="class in ij.plugin.tool">BrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/OverlayBrushTool.html#mouseReleased-ij.ImagePlus-java.awt.event.MouseEvent-">mouseReleased(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/OverlayBrushTool.html" title="class in ij.plugin.tool">OverlayBrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PlugInTool.html#mouseReleased-ij.ImagePlus-java.awt.event.MouseEvent-">mouseReleased(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool">PlugInTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/RoiRotationTool.html#mouseReleased-ij.ImagePlus-java.awt.event.MouseEvent-">mouseReleased(ImagePlus, MouseEvent)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/RoiRotationTool.html" title="class in ij.plugin.tool">RoiRotationTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#mouseReleased-java.awt.event.MouseEvent-">mouseReleased(MouseEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#mouseWheelMoved-java.awt.event.MouseWheelEvent-">mouseWheelMoved(MouseWheelEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#mouseWheelMoved-java.awt.event.MouseWheelEvent-">mouseWheelMoved(MouseWheelEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Mouse wheel: zooms when shift or ctrl is pressed, scrolls in x if space bar down, in y otherwise.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#mouseWheelMoved-java.awt.event.MouseWheelEvent-">mouseWheelMoved(MouseWheelEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#mouseWheelMoved-java.awt.event.MouseWheelEvent-">mouseWheelMoved(MouseWheelEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#mouseWheelMoved-java.awt.event.MouseWheelEvent-">mouseWheelMoved(MouseWheelEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#mouseWheelMoved-java.awt.event.MouseWheelEvent-">mouseWheelMoved(MouseWheelEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MOVE_TO">MOVE_TO</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#moveCursor">moveCursor</a></span> - Static variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/RoiListener.html#MOVED">MOVED</a></span> - Static variable in interface ij.gui.<a href="ij/gui/RoiListener.html" title="interface in ij.gui">RoiListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/EllipseRoi.html#moveHandle-int-int-">moveHandle(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/EllipseRoi.html" title="class in ij.gui">EllipseRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#moveHandle-int-int-">moveHandle(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/OvalRoi.html#moveHandle-int-int-">moveHandle(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/OvalRoi.html" title="class in ij.gui">OvalRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#moveHandle-int-int-">moveHandle(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#moveHandle-int-int-">moveHandle(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/RotatedRectRoi.html#moveHandle-int-int-">moveHandle(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/RotatedRectRoi.html" title="class in ij.gui">RotatedRectRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#moveRoisToOverlay-ij.ImagePlus-">moveRoisToOverlay(ImagePlus)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Moves all the ROIs to the specified image's overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#moveTo-int-int-">moveTo(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets the current drawing location.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#moveToMisc">moveToMisc</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Move isolated plugins to Miscellaneous submenu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#MOVING">MOVING</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#MOVING_HANDLE">MOVING_HANDLE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#MUL_EQUAL">MUL_EQUAL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><a href="ij/gui/MultiLineLabel.html" title="class in ij.gui"><span class="typeNameLink">MultiLineLabel</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">Custom component for displaying multiple lines.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/MultiLineLabel.html#MultiLineLabel-java.lang.String-">MultiLineLabel(String)</a></span> - Constructor for class ij.gui.<a href="ij/gui/MultiLineLabel.html" title="class in ij.gui">MultiLineLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MultiLineLabel.html#MultiLineLabel-java.lang.String-int-">MultiLineLabel(String, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/MultiLineLabel.html" title="class in ij.gui">MultiLineLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#multiMeasure-ij.ImagePlus-">multiMeasure(ImagePlus)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">This method measures the selected ROIs, or all ROIs if
none are selected, on all the slices of a stack and returns
a ResultsTable arranged with one row per slice.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#MULTIPLY">MULTIPLY</a></span> - Static variable in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">dst=src*src</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#multiply-ij.process.FHT-">multiply(FHT)</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Returns the image resulting from the point by point Hartley multiplication
of this image and the specified image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#multiply-double-">multiply(double)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#multiply-double-">multiply(double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Multiplies each pixel in the image or ROI by 'value'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#multiply-double-">multiply(double)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#multiPointMode">multiPointMode</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Use MultiPoint tool.</div>
</dd>
</dl>
<a name="I:N">
<!-- -->
</a>
<h2 class="title">N</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#n-double-">n(double)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Converts a number to a formatted string with a tab at the end.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#N_COORDINATES">N_COORDINATES</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#name">name</a></span> - Variable in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#NAME_LENGTH">NAME_LENGTH</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#NAME_OFFSET">NAME_OFFSET</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#NaN">NaN</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#NaN_EMPTY_CELLS">NaN_EMPTY_CELLS</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#nBins">nBins</a></span> - Static variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#nBins">nBins</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#nChannels">nChannels</a></span> - Variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/EllipseFitter.html#nCoordinates">nCoordinates</a></span> - Variable in class ij.process.<a href="ij/process/EllipseFitter.html" title="class in ij.process">EllipseFitter</a></dt>
<dd>
<div class="block">Initialized by makeRoi()</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#NEAREST_NEIGHBOR">NEAREST_NEIGHBOR</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Interpolation methods</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#NEQ">NEQ</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#NEW_ARRAY">NEW_ARRAY</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#NEW_IMAGE">NEW_IMAGE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#NEW_MENU">NEW_MENU</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#NEW_SUBFILE_TYPE">NEW_SUBFILE_TYPE</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#newDescriptor-java.lang.String-ij.macro.MacroExtension-int:A-">newDescriptor(String, MacroExtension, int[])</a></span> - Static method in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#newDescriptor-java.lang.String-ij.macro.MacroExtension-">newDescriptor(String, MacroExtension)</a></span> - Static method in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#newDescriptor-java.lang.String-ij.macro.MacroExtension-int-">newDescriptor(String, MacroExtension, int)</a></span> - Static method in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#newDescriptor-java.lang.String-ij.macro.MacroExtension-int-int-">newDescriptor(String, MacroExtension, int, int)</a></span> - Static method in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#newDescriptor-java.lang.String-ij.macro.MacroExtension-int-int-int-">newDescriptor(String, MacroExtension, int, int, int)</a></span> - Static method in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#newDescriptor-java.lang.String-ij.macro.MacroExtension-int-int-int-int-">newDescriptor(String, MacroExtension, int, int, int, int)</a></span> - Static method in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/ExtensionDescriptor.html#newDescriptor-java.lang.String-ij.macro.MacroExtension-java.lang.Integer:A-">newDescriptor(String, MacroExtension, Integer[])</a></span> - Static method in class ij.macro.<a href="ij/macro/ExtensionDescriptor.html" title="class in ij.macro">ExtensionDescriptor</a></dt>
<dd> </dd>
<dt><a href="ij/gui/NewImage.html" title="class in ij.gui"><span class="typeNameLink">NewImage</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">New image dialog box plus several static utility methods for creating images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#NewImage--">NewImage()</a></span> - Constructor for class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#newImage-java.lang.String-java.lang.String-int-int-int-">newImage(String, String, int, int, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Opens a new image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#newMaxCount">newMaxCount</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#newPixels">newPixels</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/NewPlugin.html" title="class in ij.plugin"><span class="typeNameLink">NewPlugin</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This class creates a new macro or the Java source for a new plugin.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NewPlugin.html#NewPlugin--">NewPlugin()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/NewPlugin.html" title="class in ij.plugin">NewPlugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Converter.html#newWindowCreated">newWindowCreated</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Converter.html" title="class in ij.plugin">Converter</a></dt>
<dd>
<div class="block">obsolete</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.PointIterator.html#next--">next()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.PointIterator.html" title="class in ij.gui">Line.PointIterator</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/NextImageOpener.html" title="class in ij.plugin"><span class="typeNameLink">NextImageOpener</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NextImageOpener.html#NextImageOpener--">NextImageOpener()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/NextImageOpener.html" title="class in ij.plugin">NextImageOpener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#nFrames">nFrames</a></span> - Variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#NIH_IMAGE_HDR">NIH_IMAGE_HDR</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#nImages">nImages</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#NIMAGES">NIMAGES</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#NO_CHANGES">NO_CHANGES</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the filter makes no changes to the pixel data and does not require undo.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/AVI_Writer.html#NO_COMPRESSION">NO_COMPRESSION</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/AVI_Writer.html" title="class in ij.plugin.filter">AVI_Writer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#NO_IMAGE_REQUIRED">NO_IMAGE_REQUIRED</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the filter does not require that an image be open.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#NO_LUT_UPDATE">NO_LUT_UPDATE</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#NO_SHOW">NO_SHOW</a></span> - Static variable in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Run embedded and invisible in another application.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#NO_THRESHOLD">NO_THRESHOLD</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Value returned by getMinThreshold() when thresholding is not enabled.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#NO_UNDO">NO_UNDO</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the filter does not require undo.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#NO_WINDOW">NO_WINDOW</a></span> - Static variable in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#noBorder">noBorder</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Do not draw black border around image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#noClickToGC">noClickToGC</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Don't run garbage collector when user clicks in status bar</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#noGridLines">noGridLines</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Have axes with no grid lines.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#noImage--">noImage()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Displays a "no images are open" dialog box.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#noise-double-">noise(double)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Adds pseudorandom, Gaussian ("normally") distributed values, with
mean 0.0 and the specified standard deviation, to this image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#noise-double-">noise(double)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#noise-double-">noise(double)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#noise-double-">noise(double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Adds pseudorandom, Gaussian ("normally") distributed values, with
mean 0.0 and the specified standard deviation, to this image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#noise-double-">noise(double)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Adds pseudorandom, Gaussian ("normally") distributed values, with
mean 0.0 and the specified standard deviation, to this image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#NOISE_SD">NOISE_SD</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#nonBatchMacroRunning--">nonBatchMacroRunning()</a></span> - Static method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><a href="ij/gui/NonBlockingGenericDialog.html" title="class in ij.gui"><span class="typeNameLink">NonBlockingGenericDialog</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This is an extension of GenericDialog that is non-model.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/NonBlockingGenericDialog.html#NonBlockingGenericDialog-java.lang.String-">NonBlockingGenericDialog(String)</a></span> - Constructor for class ij.gui.<a href="ij/gui/NonBlockingGenericDialog.html" title="class in ij.gui">NonBlockingGenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#NONE">NONE</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#NONE">NONE</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Interpolation methods</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#nonScalable">nonScalable</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#NOP">NOP</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#noPointLabels">noPointLabels</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Do not label multiple points created using point tool.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#NORMAL">NORMAL</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#NORMAL_RETURN">NORMAL_RETURN</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#noRowNumbers">noRowNumbers</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Do not include row numbers when copying tables to clipboard.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Shadows.html#north-ij.process.ImageProcessor-">north(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Shadows.html" title="class in ij.plugin.filter">Shadows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Shadows.html#northeast-ij.process.ImageProcessor-">northeast(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Shadows.html" title="class in ij.plugin.filter">Shadows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Shadows.html#northwest-ij.process.ImageProcessor-">northwest(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Shadows.html" title="class in ij.plugin.filter">Shadows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#not-ij.gui.ShapeRoi-">not(ShapeRoi)</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Unary subtraction operator.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Debugger.html#NOT_DEBUGGING">NOT_DEBUGGING</a></span> - Static variable in interface ij.macro.<a href="ij/macro/Debugger.html" title="interface in ij.macro">Debugger</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#NOT_INSTALLED">NOT_INSTALLED</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#NOT_PASTING">NOT_PASTING</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#NOTCHED">NOTCHED</a></span> - Static variable in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#NOTHING">NOTHING</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Undo.html#NOTHING">NOTHING</a></span> - Static variable in class ij.<a href="ij/Undo.html" title="class in ij">Undo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#noTicks">noTicks</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Have axes with no ticks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#notifyEventListeners-int-">notifyEventListeners(int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#notifyListeners-int-">notifyListeners(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#notifyListeners-int-">notifyListeners(int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#nPoints">nPoints</a></span> - Variable in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Wand.html#npoints">npoints</a></span> - Variable in class ij.gui.<a href="ij/gui/Wand.html" title="class in ij.gui">Wand</a></dt>
<dd>
<div class="block">The number of points in the generated outline.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatPolygon.html#npoints">npoints</a></span> - Variable in class ij.process.<a href="ij/process/FloatPolygon.html" title="class in ij.process">FloatPolygon</a></dt>
<dd>
<div class="block">The number of points.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#NRESULTS">NRESULTS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#nSlices">nSlices</a></span> - Variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#NSLICES">NSLICES</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#nudge-int-">nudge(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Nudge ROI one pixel on arrow key press.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#nudgeCorner-int-">nudgeCorner(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd>
<div class="block">Nudge end point of line by one pixel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#nudgeCorner-int-">nudgeCorner(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Nudge lower right corner of rectangular and oval ROIs by
one pixel based on arrow key press.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#NUMBER">NUMBER</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#numberField">numberField</a></span> - Variable in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#NUMERIC_FUNCTION">NUMERIC_FUNCTION</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#numericFunctionIDs">numericFunctionIDs</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#numericFunctions">numericFunctions</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
</dl>
<a name="I:O">
<!-- -->
</a>
<h2 class="title">O</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#offScreenX-int-">offScreenX(int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Converts a screen x-coordinate to an offscreen x-coordinate.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#offScreenXD-int-">offScreenXD(int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Converts a screen x-coordinate to a floating-point offscreen x-coordinate.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#offScreenY-int-">offScreenY(int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Converts a screen y-coordinate to an offscreen y-coordinate.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#offScreenYD-int-">offScreenYD(int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Converts a screen y-coordinate to a floating-point offscreen y-coordinate.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#offset">offset</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#OJJ">OJJ</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#okForFits-ij.ImagePlus-">okForFits(ImagePlus)</a></span> - Static method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#okForGif-ij.ImagePlus-">okForGif(ImagePlus)</a></span> - Static method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#okForJpeg-ij.ImagePlus-">okForJpeg(ImagePlus)</a></span> - Static method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Always returns true.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#oldHeight">oldHeight</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#oldWidth">oldWidth</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#oldX">oldX</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#oldX">oldX</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#oldY">oldY</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#oldY">oldY</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#ONE">ONE</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">Unit in old make16bitEDM: this pixel value corresponds to a distance of one pixel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#onePixelWide">onePixelWide</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#OPEN">OPEN</a></span> - Static variable in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#open-java.lang.String-int-int-int-int-int-">open(String, int, int, int, int, int)</a></span> - Static method in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#open--">open()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Displays a file open dialog box and then opens the tiff, dicom,
fits, pgm, jpeg, bmp, gif, lut, roi, or text file selected by
the user.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#open-java.lang.String-">open(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Opens and displays a tiff, dicom, fits, pgm, jpeg, bmp, gif, lut,
roi, or text file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#open-java.lang.String-int-">open(String, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Opens and displays the nth image in the specified tiff stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileOpener.html#open--">open()</a></span> - Method in class ij.io.<a href="ij/io/FileOpener.html" title="class in ij.io">FileOpener</a></dt>
<dd>
<div class="block">Opens the image and displays it.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileOpener.html#open-boolean-">open(boolean)</a></span> - Method in class ij.io.<a href="ij/io/FileOpener.html" title="class in ij.io">FileOpener</a></dt>
<dd>
<div class="block">Obsolete, replaced by openImage() and open().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#open--">open()</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Displays a file open dialog box and then opens the tiff, dicom,
fits, pgm, jpeg, bmp, gif, lut, roi, or text file selected by
the user.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#open-java.lang.String-">open(String)</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Opens and displays the specified tiff, dicom, fits, pgm, jpeg,
bmp, gif, lut, roi, or text file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#open-java.lang.String-">open(String)</a></span> - Static method in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd>
<div class="block">Opens the Roi at the specified path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#OPEN">OPEN</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Macro.html#open-java.lang.String-">open(String)</a></span> - Static method in class ij.<a href="ij/Macro.html" title="class in ij">Macro</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#open-java.lang.String-">open(String)</a></span> - Static method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Opens a tab or comma delimited text file and returns it as a
ResultsTable.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AVI_Reader.html#open-java.lang.String-boolean-">open(String, boolean)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/AVI_Reader.html" title="class in ij.plugin">AVI_Reader</a></dt>
<dd>
<div class="block">Opens an AVI file as a stack in memory or a virtual stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/DICOM.html#open-java.lang.String-">open(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/DICOM.html" title="class in ij.plugin">DICOM</a></dt>
<dd>
<div class="block">Opens the specified file as a DICOM.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#OPEN">OPEN</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FolderOpener.html#open-java.lang.String-">open(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/FolderOpener.html" title="class in ij.plugin">FolderOpener</a></dt>
<dd>
<div class="block">Opens the images in the specified directory as a stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FolderOpener.html#open-java.lang.String-java.lang.String-">open(String, String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/FolderOpener.html" title="class in ij.plugin">FolderOpener</a></dt>
<dd>
<div class="block">Opens the images in the specified directory as a stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#open-java.lang.String-java.lang.String-">open(String, String)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd>
<div class="block">Opens a file and replaces the text (if any) by the contents of the file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/LutLoader.html#open-java.lang.String-">open(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/LutLoader.html" title="class in ij.plugin">LutLoader</a></dt>
<dd>
<div class="block">Opens the specified ImageJ LUT and returns
it as an IndexColorModel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/LutLoader.html#open-java.io.InputStream-">open(InputStream)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/LutLoader.html" title="class in ij.plugin">LutLoader</a></dt>
<dd>
<div class="block">Opens an ImageJ LUT using an InputStream
and returns it as an IndexColorModel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/TextReader.html#open--">open()</a></span> - Method in class ij.plugin.<a href="ij/plugin/TextReader.html" title="class in ij.plugin">TextReader</a></dt>
<dd>
<div class="block">Displays a file open dialog and opens the specified text file as a float image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/TextReader.html#open-java.lang.String-">open(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/TextReader.html" title="class in ij.plugin">TextReader</a></dt>
<dd>
<div class="block">Opens the specified text file as a float image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#open100Percent">open100Percent</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Open images at 100% magnification</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PGM_Reader.html#open16bitAsciiImage-java.io.StreamTokenizer-int-int-">open16bitAsciiImage(StreamTokenizer, int, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/PGM_Reader.html" title="class in ij.plugin">PGM_Reader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PGM_Reader.html#open16bitRawImage-java.io.InputStream-int-int-">open16bitRawImage(InputStream, int, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/PGM_Reader.html" title="class in ij.plugin">PGM_Reader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#open2-java.lang.String-">open2(String)</a></span> - Static method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Opens a tab or comma delimited text file and returns it
as a ResultsTable, without requiring a try/catch statement.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openAndAddToRecent-java.lang.String-">openAndAddToRecent(String)</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Opens the specified file and adds it to the File/Open Recent menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PGM_Reader.html#openAsciiImage-java.io.StreamTokenizer-int-byte:A-">openAsciiImage(StreamTokenizer, int, byte[])</a></span> - Method in class ij.plugin.<a href="ij/plugin/PGM_Reader.html" title="class in ij.plugin">PGM_Reader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#openAsString-java.lang.String-">openAsString(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Opens a text file as a string.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FolderOpener.html#openAsVirtualStack-boolean-">openAsVirtualStack(boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/FolderOpener.html" title="class in ij.plugin">FolderOpener</a></dt>
<dd> </dd>
<dt><a href="ij/io/OpenDialog.html" title="class in ij.io"><span class="typeNameLink">OpenDialog</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">This class displays a dialog window from
which the user can select an input file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/OpenDialog.html#OpenDialog-java.lang.String-">OpenDialog(String)</a></span> - Constructor for class ij.io.<a href="ij/io/OpenDialog.html" title="class in ij.io">OpenDialog</a></dt>
<dd>
<div class="block">Displays a file open dialog with 'title' as the title.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/OpenDialog.html#OpenDialog-java.lang.String-java.lang.String-">OpenDialog(String, String)</a></span> - Constructor for class ij.io.<a href="ij/io/OpenDialog.html" title="class in ij.io">OpenDialog</a></dt>
<dd>
<div class="block">Displays a file open dialog with 'title' as
the title.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/OpenDialog.html#OpenDialog-java.lang.String-java.lang.String-java.lang.String-">OpenDialog(String, String, String)</a></span> - Constructor for class ij.io.<a href="ij/io/OpenDialog.html" title="class in ij.io">OpenDialog</a></dt>
<dd>
<div class="block">Displays a file open dialog, using the specified
default directory and file name.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#openDicomsAsFloat">openDicomsAsFloat</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Open DICOMs as 32-bit float images</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#OPENED">OPENED</a></span> - Static variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><a href="ij/io/Opener.html" title="class in ij.io"><span class="typeNameLink">Opener</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">Opens tiff (and tiff stacks), dicom, fits, pgm, jpeg, bmp or
gif images, and look-up tables, using a file open dialog or a path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#Opener--">Opener()</a></span> - Constructor for class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/DragAndDrop.html#openFile-java.io.File-">openFile(File)</a></span> - Method in class ij.plugin.<a href="ij/plugin/DragAndDrop.html" title="class in ij.plugin">DragAndDrop</a></dt>
<dd>
<div class="block">Open a file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PGM_Reader.html#openFile-java.lang.String-">openFile(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/PGM_Reader.html" title="class in ij.plugin">PGM_Reader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FolderOpener.html#openFolder-java.lang.String-">openFolder(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/FolderOpener.html" title="class in ij.plugin">FolderOpener</a></dt>
<dd>
<div class="block">Opens the images in the specified directory as a stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#openFromByteArray-byte:A-">openFromByteArray(byte[])</a></span> - Static method in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd>
<div class="block">Opens an ROI from a byte array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#openFromIJJar-java.lang.String-">openFromIJJar(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd>
<div class="block">Returns a text file contained in ij.jar.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#openFromIJJarAsString-java.lang.String-">openFromIJJarAsString(String)</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd>
<div class="block">Opens a text file in ij.jar as a String (example path: "/macros/Circle_Tool.txt").</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PGM_Reader.html#openHeader-java.io.StreamTokenizer-">openHeader(StreamTokenizer)</a></span> - Method in class ij.plugin.<a href="ij/plugin/PGM_Reader.html" title="class in ij.plugin">PGM_Reader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#openImage-java.lang.String-">openImage(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Opens the specified file as a tiff, bmp, dicom, fits, pgm, gif, jpeg
or text image and returns an ImagePlus object if successful.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#openImage-java.lang.String-int-">openImage(String, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Opens the nth image of the specified tiff stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#openImage--">openImage()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Opens an image using a file open dialog and returns it as an ImagePlus object.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileOpener.html#openImage--">openImage()</a></span> - Method in class ij.io.<a href="ij/io/FileOpener.html" title="class in ij.io">FileOpener</a></dt>
<dd>
<div class="block">Opens the image and returns it has an ImagePlus object.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/ImportDialog.html#openImage--">openImage()</a></span> - Method in class ij.io.<a href="ij/io/ImportDialog.html" title="class in ij.io">ImportDialog</a></dt>
<dd>
<div class="block">Displays the dialog and opens the specified image or images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openImage-java.lang.String-">openImage(String)</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Opens, but does not display, the specified image file
and returns an ImagePlus object object if successful,
or returns null if the file is not in a supported format
or is not found.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openImage-java.lang.String-int-">openImage(String, int)</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Open the nth image of the specified tiff stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openImage-java.lang.String-java.lang.String-">openImage(String, String)</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Attempts to open the specified file as a tiff, bmp, dicom, fits,
pgm, gif or jpeg image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openLut-java.lang.String-">openLut(String)</a></span> - Static method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Opens a lookup table (LUT) and returns it as a LUT object, or returns null if there is an error.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/LutLoader.html#openLut-java.lang.String-">openLut(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/LutLoader.html" title="class in ij.plugin">LutLoader</a></dt>
<dd>
<div class="block">Opens a LUT and returns it as a LUT object.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BatchProcessor.html#openMacroFromJar-java.lang.String-">openMacroFromJar(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/BatchProcessor.html" title="class in ij.plugin">BatchProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openMultiple--">openMultiple()</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Displays a JFileChooser and then opens the tiff, dicom,
fits, pgm, jpeg, bmp, gif, lut, roi, or text files selected by
the user.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#openNextDir">openNextDir</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#openNextName">openNextName</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PGM_Reader.html#openRawImage-java.io.InputStream-int-byte:A-">openRawImage(InputStream, int, byte[])</a></span> - Method in class ij.plugin.<a href="ij/plugin/PGM_Reader.html" title="class in ij.plugin">PGM_Reader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openResultsTable-java.lang.String-">openResultsTable(String)</a></span> - Static method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Opens a tab or comma delimited text file in the Results window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openRoi-java.lang.String-">openRoi(String)</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Attempts to open the specified ROI, returning null if unsuccessful.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiReader.html#openRoi-java.lang.String-java.lang.String-">openRoi(String, String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RoiReader.html" title="class in ij.plugin">RoiReader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openTable-java.lang.String-">openTable(String)</a></span> - Static method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Opens a tab or comma delimited text file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openTextImage-java.lang.String-java.lang.String-">openTextImage(String, String)</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Opens the specified text file as a float image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openTiff-java.lang.String-java.lang.String-">openTiff(String, String)</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Attempts to open the specified file as a tiff.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openTiff-java.lang.String-int-">openTiff(String, int)</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Opens the nth image of the specified TIFF stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openTiff-java.io.InputStream-java.lang.String-">openTiff(InputStream, String)</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Attempts to open the specified inputStream as a
TIFF, returning an ImagePlus object if successful.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openTiffStack-ij.io.FileInfo:A-">openTiffStack(FileInfo[])</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Attemps to open a tiff file as a stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openURL-java.lang.String-">openURL(String)</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Attempts to open the specified url as a tiff, zip compressed tiff,
dicom, gif or jpeg.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BrowserLauncher.html#openURL-java.lang.String-">openURL(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/BrowserLauncher.html" title="class in ij.plugin">BrowserLauncher</a></dt>
<dd>
<div class="block">Attempts to open the default web browser to the given URL.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#openUrlAsString-java.lang.String-">openUrlAsString(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Opens a URL and returns the contents as a string.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openUsingBioFormats-java.lang.String-">openUsingBioFormats(String)</a></span> - Static method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Opens an image file using the Bio-Formats plugin.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#openVirtual-java.lang.String-">openVirtual(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Opens the specified tiff file as a virtual stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AVI_Reader.html#openVirtual-java.lang.String-">openVirtual(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/AVI_Reader.html" title="class in ij.plugin">AVI_Reader</a></dt>
<dd>
<div class="block">Opens an AVI file as a virtual stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FileInfoVirtualStack.html#openVirtual-java.lang.String-">openVirtual(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/FileInfoVirtualStack.html" title="class in ij.plugin">FileInfoVirtualStack</a></dt>
<dd>
<div class="block">Opens the specified tiff file as a virtual stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openWithHandleExtraFileTypes-java.lang.String-int:A-">openWithHandleExtraFileTypes(String, int[])</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#openZip-java.lang.String-">openZip(String)</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Opens a single TIFF or DICOM contained in a ZIP archive,
or a ZIPed collection of ".roi" files created by the ROI manager.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#OPTIONS">OPTIONS</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Options.html" title="class in ij.plugin"><span class="typeNameLink">Options</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements most of the commands
in the Edit/Options sub-menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Options.html#Options--">Options()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Options.html" title="class in ij.plugin">Options</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#OPTIONS">OPTIONS</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#OPTIONS2">OPTIONS2</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#or-ij.gui.ShapeRoi-">or(ShapeRoi)</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Unary union operator.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#OR">OR</a></span> - Static variable in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">dst=dst OR src</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#or-int-">or(int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#or-int-">or(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Binary OR of each pixel in the image or ROI with 'value'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#or-int-">or(int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#ORIENTATION">ORIENTATION</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#originalBitDepth">originalBitDepth</a></span> - Variable in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Used by the FFT class.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#originalColorModel">originalColorModel</a></span> - Variable in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Used by the FFT class.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#originalHeight">originalHeight</a></span> - Variable in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Used by the FFT class.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#originalWidth">originalWidth</a></span> - Variable in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Used by the FFT class.</div>
</dd>
<dt><a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin"><span class="typeNameLink">Orthogonal_Views</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin projects dynamically orthogonal XZ and YZ views of a stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#Orthogonal_Views--">Orthogonal_Views()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><a href="ij/OtherInstance.html" title="class in ij"><span class="typeNameLink">OtherInstance</span></a> - Class in <a href="ij/package-summary.html">ij</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/OtherInstance.html#OtherInstance--">OtherInstance()</a></span> - Constructor for class ij.<a href="ij/OtherInstance.html" title="class in ij">OtherInstance</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#OUTLIERS">OUTLIERS</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#OUTLINE">OUTLINE</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/BinaryProcessor.html#outline--">outline()</a></span> - Method in class ij.process.<a href="ij/process/BinaryProcessor.html" title="class in ij.process">BinaryProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#outline--">outline()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#OUTLINE_KEY">OUTLINE_KEY</a></span> - Static variable in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#OUTLINES">OUTLINES</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#outOfMemory-java.lang.String-">outOfMemory(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Displays an "out of memory" message to the "Log" window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#OVAL">OVAL</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#OVAL">OVAL</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#OVAL_ROI">OVAL_ROI</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><a href="ij/gui/OvalRoi.html" title="class in ij.gui"><span class="typeNameLink">OvalRoi</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">Oval region of interest</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/OvalRoi.html#OvalRoi-int-int-int-int-">OvalRoi(int, int, int, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/OvalRoi.html" title="class in ij.gui">OvalRoi</a></dt>
<dd>
<div class="block">Creates an OvalRoi.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/OvalRoi.html#OvalRoi-double-double-double-double-">OvalRoi(double, double, double, double)</a></span> - Constructor for class ij.gui.<a href="ij/gui/OvalRoi.html" title="class in ij.gui">OvalRoi</a></dt>
<dd>
<div class="block">Creates an OvalRoi using double arguments.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/OvalRoi.html#OvalRoi-int-int-ij.ImagePlus-">OvalRoi(int, int, ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/OvalRoi.html" title="class in ij.gui">OvalRoi</a></dt>
<dd>
<div class="block">Starts the process of creating a user-defined OvalRoi.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/OvalRoi.html#OvalRoi-int-int-int-int-ij.ImagePlus-">OvalRoi(int, int, int, int, ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/OvalRoi.html" title="class in ij.gui">OvalRoi</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span> </div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#OVER_UNDER_LUT">OVER_UNDER_LUT</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><a href="ij/gui/Overlay.html" title="class in ij.gui"><span class="typeNameLink">Overlay</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">An Overlay is a list of ROIs that can be drawn non-destructively on an Image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#Overlay--">Overlay()</a></span> - Constructor for class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Constructs an empty Overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#Overlay-ij.gui.Roi-">Overlay(Roi)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Constructs an Overlay and adds the specified ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#overlay">overlay</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#overlay">overlay</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#OVERLAY">OVERLAY</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Undo.html#OVERLAY_ADDITION">OVERLAY_ADDITION</a></span> - Static variable in class ij.<a href="ij/Undo.html" title="class in ij">Undo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#OVERLAY_BACKGROUNDS">OVERLAY_BACKGROUNDS</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#OVERLAY_BOLD">OVERLAY_BOLD</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#OVERLAY_FONT_SIZE">OVERLAY_FONT_SIZE</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#OVERLAY_LABEL_COLOR">OVERLAY_LABEL_COLOR</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#OVERLAY_LABELS">OVERLAY_LABELS</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#OVERLAY_MASKS">OVERLAY_MASKS</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#OVERLAY_NAMES">OVERLAY_NAMES</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#OVERLAY_OUTLINES">OVERLAY_OUTLINES</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/tool/OverlayBrushTool.html" title="class in ij.plugin.tool"><span class="typeNameLink">OverlayBrushTool</span></a> - Class in <a href="ij/plugin/tool/package-summary.html">ij.plugin.tool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/OverlayBrushTool.html#OverlayBrushTool--">OverlayBrushTool()</a></span> - Constructor for class ij.plugin.tool.<a href="ij/plugin/tool/OverlayBrushTool.html" title="class in ij.plugin.tool">OverlayBrushTool</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/OverlayCommands.html" title="class in ij.plugin"><span class="typeNameLink">OverlayCommands</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the commands in the Image/Overlay menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/OverlayCommands.html#OverlayCommands--">OverlayCommands()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/OverlayCommands.html" title="class in ij.plugin">OverlayCommands</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/OverlayLabels.html" title="class in ij.plugin"><span class="typeNameLink">OverlayLabels</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Image/Overlay/Labels command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/OverlayLabels.html#OverlayLabels--">OverlayLabels()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/OverlayLabels.html" title="class in ij.plugin">OverlayLabels</a></dt>
<dd> </dd>
</dl>
<a name="I:P">
<!-- -->
</a>
<h2 class="title">P</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#PACK_BITS">PACK_BITS</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/ImageReader.html#packBitsUncompress-byte:A-int-">packBitsUncompress(byte[], int)</a></span> - Method in class ij.io.<a href="ij/io/ImageReader.html" title="class in ij.io">ImageReader</a></dt>
<dd>
<div class="block">Based on the Bio-Formats PackbitsCodec written by Melissa Linkert.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#pad-int-int-">pad(int, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Pad 'n' with leading zeros to the specified number of digits.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#padEdges">padEdges</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Extend the borders to foreground for binary erosions and closings.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#paint-java.awt.Graphics-">paint(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#paint-java.awt.Graphics-">paint(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImagePanel.html#paint-java.awt.Graphics-">paint(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/ImagePanel.html" title="class in ij.gui">ImagePanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#paint-java.awt.Graphics-">paint(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MultiLineLabel.html#paint-java.awt.Graphics-">paint(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/MultiLineLabel.html" title="class in ij.gui">MultiLineLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProgressBar.html#paint-java.awt.Graphics-">paint(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/ProgressBar.html" title="class in ij.gui">ProgressBar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#paint-java.awt.Graphics-">paint(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/YesNoCancelDialog.html#paint-java.awt.Graphics-">paint(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui">YesNoCancelDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#paintDoubleBuffered">paintDoubleBuffered</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Aways paint using double buffering, except on OS X</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#panel">panel</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Panel for GUI</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#PARALLELIZE_IMAGES">PARALLELIZE_IMAGES</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if images may be processed in parallel threads.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#PARALLELIZE_STACKS">PARALLELIZE_STACKS</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the slices of a stack may be processed in parallel threads</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#PARSE_FLOAT">PARSE_FLOAT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#PARSE_INT">PARSE_INT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#parseDouble-java.lang.String-">parseDouble(String)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#parseDouble-java.lang.String-double-">parseDouble(String, double)</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd>
<div class="block">Returns a double containg the value represented by the
specified <code>String</code>.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#parseDouble-java.lang.String-">parseDouble(String)</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd>
<div class="block">Returns a double containg the value represented by the
specified <code>String</code>.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#parseMenu-java.lang.String-java.awt.Menu-">parseMenu(String, Menu)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter"><span class="typeNameLink">ParticleAnalyzer</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">Implements ImageJ's Analyze Particles command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#ParticleAnalyzer-int-int-ij.measure.ResultsTable-double-double-double-double-">ParticleAnalyzer(int, int, ResultsTable, double, double, double, double)</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Constructs a ParticleAnalyzer.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#ParticleAnalyzer-int-int-ij.measure.ResultsTable-double-double-">ParticleAnalyzer(int, int, ResultsTable, double, double)</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Constructs a ParticleAnalyzer using the default min and max circularity values (0 and 1).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#ParticleAnalyzer--">ParticleAnalyzer()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Default constructor</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloodFiller.html#particleAnalyzerFill-int-int-double-double-ij.process.ImageProcessor-java.awt.Rectangle-">particleAnalyzerFill(int, int, double, double, ImageProcessor, Rectangle)</a></span> - Method in class ij.process.<a href="ij/process/FloodFiller.html" title="class in ij.process">FloodFiller</a></dt>
<dd>
<div class="block">This method is used by the particle analyzer to remove interior holes from particle masks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#paste--">paste()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#paste--">paste()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Inserts the contents of the internal clipboard into the active image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Undo.html#PASTE">PASTE</a></span> - Static variable in class ij.<a href="ij/Undo.html" title="class in ij">Undo</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/frame/PasteController.html" title="class in ij.plugin.frame"><span class="typeNameLink">PasteController</span></a> - Class in <a href="ij/plugin/frame/package-summary.html">ij.plugin.frame</a></dt>
<dd>
<div class="block">Implements ImageJ's Paste Control window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PasteController.html#PasteController--">PasteController()</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/PasteController.html" title="class in ij.plugin.frame">PasteController</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#pasteMode">pasteMode</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/PluginClassLoader.html#path">path</a></span> - Variable in class ij.io.<a href="ij/io/PluginClassLoader.html" title="class in ij.io">PluginClassLoader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#PERIMETER">PERIMETER</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#PERIMETER">PERIMETER</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#PGM">PGM</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#PGM">PGM</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/PGM_Reader.html" title="class in ij.plugin"><span class="typeNameLink">PGM_Reader</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin opens PxM format images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PGM_Reader.html#PGM_Reader--">PGM_Reader()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/PGM_Reader.html" title="class in ij.plugin">PGM_Reader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#ph">ph</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#PHOTO_INTERP">PHOTO_INTERP</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#PI">PI</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#pixelCount">pixelCount</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Int pixel count (limited to 2^31-1)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#pixelDepth">pixelDepth</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#pixelDepth">pixelDepth</a></span> - Variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Pixel depth in 'unit's</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#pixelHeight">pixelHeight</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#pixelHeight">pixelHeight</a></span> - Variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Pixel height in 'unit's</div>
</dd>
<dt><a href="ij/plugin/tool/PixelInspectionTool.html" title="class in ij.plugin.tool"><span class="typeNameLink">PixelInspectionTool</span></a> - Class in <a href="ij/plugin/tool/package-summary.html">ij.plugin.tool</a></dt>
<dd>
<div class="block">This plugin continuously displays the pixel values of the cursor and
its surroundings.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PixelInspectionTool.html#PixelInspectionTool--">PixelInspectionTool()</a></span> - Constructor for class ij.plugin.tool.<a href="ij/plugin/tool/PixelInspectionTool.html" title="class in ij.plugin.tool">PixelInspectionTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#pixels">pixels</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#pixels">pixels</a></span> - Variable in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#pixels">pixels</a></span> - Variable in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#pixels8">pixels8</a></span> - Variable in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#pixelWidth">pixelWidth</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#pixelWidth">pixelWidth</a></span> - Variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Pixel width in 'unit's</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#PLANAR_CONFIGURATION">PLANAR_CONFIGURATION</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><a href="ij/gui/Plot.html" title="class in ij.gui"><span class="typeNameLink">Plot</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This class creates an image that line graphs, scatter plots and plots of vector fields
(arrows) can be drawn on and displayed.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#Plot-java.lang.String-java.lang.String-java.lang.String-float:A-float:A-">Plot(String, String, String, float[], float[])</a></span> - Constructor for class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Constructs a new Plot.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#Plot-java.lang.String-java.lang.String-java.lang.String-double:A-double:A-">Plot(String, String, String, double[], double[])</a></span> - Constructor for class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">This version of the constructor accepts double arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#Plot-java.lang.String-java.lang.String-java.lang.String-java.lang.String-float:A-float:A-">Plot(String, String, String, String, float[], float[])</a></span> - Constructor for class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">This is a constructor that works with JavaScript.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#Plot-java.lang.String-java.lang.String-java.lang.String-">Plot(String, String, String)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">This is a version of the constructor with no intial arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#Plot-java.lang.String-java.lang.String-java.lang.String-int-">Plot(String, String, String, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">This is a version of the constructor with no intial arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#Plot-java.lang.String-java.lang.String-java.lang.String-float:A-float:A-int-">Plot(String, String, String, float[], float[], int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">This version of the constructor has a 'flags' argument for
controlling whether ticks, grid, etc.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#Plot-java.lang.String-java.lang.String-java.lang.String-double:A-double:A-int-">Plot(String, String, String, double[], double[], int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">This version of the constructor accepts double arrays and has a 'flags' argument.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#Plot-ij.ImagePlus-java.io.InputStream-">Plot(ImagePlus, InputStream)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Constructs a new plot from an InputStream and closes the stream.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#plot">plot</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#PLOT">PLOT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Fitter.html#plot-ij.measure.CurveFitter-">plot(CurveFitter)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Fitter.html" title="class in ij.plugin.frame">Fitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Fitter.html#plot-ij.measure.CurveFitter-boolean-">plot(CurveFitter, boolean)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Fitter.html" title="class in ij.plugin.frame">Fitter</a></dt>
<dd> </dd>
<dt><a href="ij/gui/PlotCanvas.html" title="class in ij.gui"><span class="typeNameLink">PlotCanvas</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This subclass of ImageCanvas has special provisions for plots:
- Zooming: sets the plot range
- Scrolling: moves data area
This behavior is suppressed if the plot is frozen</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#PlotCanvas-ij.ImagePlus-">PlotCanvas(ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">Creates a new PlotCanvas</div>
</dd>
<dt><a href="ij/gui/PlotContentsStyleDialog.html" title="class in ij.gui"><span class="typeNameLink">PlotContentsStyleDialog</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This class implements the Plot Window's More>Contents Style dialog</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotContentsStyleDialog.html#PlotContentsStyleDialog-ij.gui.Plot-">PlotContentsStyleDialog(Plot)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PlotContentsStyleDialog.html" title="class in ij.gui">PlotContentsStyleDialog</a></dt>
<dd>
<div class="block">Creator that sets a plot to use</div>
</dd>
<dt><a href="ij/gui/PlotDialog.html" title="class in ij.gui"><span class="typeNameLink">PlotDialog</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotDialog.html#PlotDialog-ij.gui.Plot-int-">PlotDialog(Plot, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PlotDialog.html" title="class in ij.gui">PlotDialog</a></dt>
<dd>
<div class="block">Construct a new PlotDialog, show it and do the appropriate action on the plot</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#plotHeight">plotHeight</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">The height of the plot in pixels.</div>
</dd>
<dt><a href="ij/gui/PlotMaker.html" title="interface in ij.gui"><span class="typeNameLink">PlotMaker</span></a> - Interface in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">Plugins that generate "Live" profile plots (Profiler and ZAxisProfiler)
displayed in PlotWindows implement this interface.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#plotScale">plotScale</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#plotWidth">plotWidth</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">The width of the plot (without frame) in pixels.</div>
</dd>
<dt><a href="ij/gui/PlotWindow.html" title="class in ij.gui"><span class="typeNameLink">PlotWindow</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This class implements the Analyze/Plot Profile command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#PlotWindow-java.lang.String-java.lang.String-java.lang.String-float:A-float:A-">PlotWindow(String, String, String, float[], float[])</a></span> - Constructor for class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by the Plot class.</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#PlotWindow-java.lang.String-java.lang.String-java.lang.String-double:A-double:A-">PlotWindow(String, String, String, double[], double[])</a></span> - Constructor for class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by the Plot class.</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#PlotWindow-ij.ImagePlus-ij.gui.Plot-">PlotWindow(ImagePlus, Plot)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Creates a PlotWindow from a given ImagePlus with a Plot object.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NewPlugin.html#PLUGIN">PLUGIN</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/NewPlugin.html" title="class in ij.plugin">NewPlugin</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/PlugIn.html" title="interface in ij.plugin"><span class="typeNameLink">PlugIn</span></a> - Interface in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Plugins that acquire images or display windows should
implement this interface.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NewPlugin.html#PLUGIN_FILTER">PLUGIN_FILTER</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/NewPlugin.html" title="class in ij.plugin">NewPlugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NewPlugin.html#PLUGIN_FRAME">PLUGIN_FRAME</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/NewPlugin.html" title="class in ij.plugin">NewPlugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NewPlugin.html#PLUGIN_TOOL">PLUGIN_TOOL</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/NewPlugin.html" title="class in ij.plugin">NewPlugin</a></dt>
<dd> </dd>
<dt><a href="ij/io/PluginClassLoader.html" title="class in ij.io"><span class="typeNameLink">PluginClassLoader</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">ImageJ uses this class loader to load plugins and resources from the
plugins directory and immediate subdirectories.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/PluginClassLoader.html#PluginClassLoader-java.lang.String-">PluginClassLoader(String)</a></span> - Constructor for class ij.io.<a href="ij/io/PluginClassLoader.html" title="class in ij.io">PluginClassLoader</a></dt>
<dd>
<div class="block">Creates a new PluginClassLoader that searches in the directory path
passed as a parameter.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/PluginClassLoader.html#PluginClassLoader-java.lang.String-boolean-">PluginClassLoader(String, boolean)</a></span> - Constructor for class ij.io.<a href="ij/io/PluginClassLoader.html" title="class in ij.io">PluginClassLoader</a></dt>
<dd>
<div class="block">This version of the constructor is used when ImageJ is launched using Java WebStart.</div>
</dd>
<dt><a href="ij/plugin/frame/PlugInDialog.html" title="class in ij.plugin.frame"><span class="typeNameLink">PlugInDialog</span></a> - Class in <a href="ij/plugin/frame/package-summary.html">ij.plugin.frame</a></dt>
<dd>
<div class="block">This is a non-modal dialog that plugins can extend.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInDialog.html#PlugInDialog-java.lang.String-">PlugInDialog(String)</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/PlugInDialog.html" title="class in ij.plugin.frame">PlugInDialog</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter"><span class="typeNameLink">PlugInFilter</span></a> - Interface in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">ImageJ plugins that process an image should implement this interface.</div>
</dd>
<dt><a href="ij/plugin/filter/PlugInFilterRunner.html" title="class in ij.plugin.filter"><span class="typeNameLink">PlugInFilterRunner</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilterRunner.html#PlugInFilterRunner-java.lang.Object-java.lang.String-java.lang.String-">PlugInFilterRunner(Object, String, String)</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilterRunner.html" title="class in ij.plugin.filter">PlugInFilterRunner</a></dt>
<dd>
<div class="block">The constructor runs a PlugInFilter or ExtendedPlugInFilter by calling its
setup, run, etc.</div>
</dd>
<dt><a href="ij/plugin/frame/PlugInFrame.html" title="class in ij.plugin.frame"><span class="typeNameLink">PlugInFrame</span></a> - Class in <a href="ij/plugin/frame/package-summary.html">ij.plugin.frame</a></dt>
<dd>
<div class="block">This is a closeable window that plugins can extend.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInFrame.html#PlugInFrame-java.lang.String-">PlugInFrame(String)</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/PlugInFrame.html" title="class in ij.plugin.frame">PlugInFrame</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/PluginInstaller.html" title="class in ij.plugin"><span class="typeNameLink">PluginInstaller</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Installs plugins dragged and dropped on the "ImageJ" window, or plugins,
macros or scripts opened using the Plugins/Install command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PluginInstaller.html#PluginInstaller--">PluginInstaller()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/PluginInstaller.html" title="class in ij.plugin">PluginInstaller</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/PlugInInterpreter.html" title="class in ij.plugin"><span class="typeNameLink">PlugInInterpreter</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Plugins that run scripts (e.g., BeanShell, Jython) extend this class.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PlugInInterpreter.html#PlugInInterpreter--">PlugInInterpreter()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/PlugInInterpreter.html" title="class in ij.plugin">PlugInInterpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Concatenator.html#pluginName">pluginName</a></span> - Variable in class ij.plugin.<a href="ij/plugin/Concatenator.html" title="class in ij.plugin">Concatenator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#PLUGINS_MENU">PLUGINS_MENU</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool"><span class="typeNameLink">PlugInTool</span></a> - Class in <a href="ij/plugin/tool/package-summary.html">ij.plugin.tool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PlugInTool.html#PlugInTool--">PlugInTool()</a></span> - Constructor for class ij.plugin.tool.<a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool">PlugInTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#PLUS_EQUAL">PLUS_EQUAL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#PLUS_PLUS">PLUS_PLUS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#PNG">PNG</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/AVI_Writer.html#PNG_COMPRESSION">PNG_COMPRESSION</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/AVI_Writer.html" title="class in ij.plugin.filter">AVI_Writer</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/PNG_Writer.html" title="class in ij.plugin"><span class="typeNameLink">PNG_Writer</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Saves in PNG format using the ImageIO classes.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PNG_Writer.html#PNG_Writer--">PNG_Writer()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/PNG_Writer.html" title="class in ij.plugin">PNG_Writer</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/PNM_Writer.html" title="class in ij.plugin"><span class="typeNameLink">PNM_Writer</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PNM_Writer.html#PNM_Writer--">PNM_Writer()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/PNM_Writer.html" title="class in ij.plugin">PNM_Writer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#POINT">POINT</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#POINT">POINT</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#POINT_SELECTION">POINT_SELECTION</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd>
<div class="block">Do not create image, only mark points</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#POINT_TYPE">POINT_TYPE</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#pointAddToManager">pointAddToManager</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Add points to ROI Manager.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#pointAddToOverlay">pointAddToOverlay</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Add points to overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#pointAutoMeasure">pointAutoMeasure</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Point tool auto-measure mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#pointAutoNextSlice">pointAutoNextSlice</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Point tool auto-next slice mode (not saved in IJ_Prefs).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.PointIterator.html#PointIterator-ij.gui.Line-">PointIterator(Line)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Line.PointIterator.html" title="class in ij.gui">Line.PointIterator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.PointIterator.html#PointIterator-double-double-double-double-">PointIterator(double, double, double, double)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Line.PointIterator.html" title="class in ij.gui">Line.PointIterator</a></dt>
<dd> </dd>
<dt><a href="ij/gui/PointRoi.html" title="class in ij.gui"><span class="typeNameLink">PointRoi</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This class represents a collection of points.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#PointRoi-int:A-int:A-int-">PointRoi(int[], int[], int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Creates a new PointRoi using the specified int arrays of offscreen coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#PointRoi-float:A-float:A-int-">PointRoi(float[], float[], int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Creates a new PointRoi using the specified float arrays of offscreen coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#PointRoi-float:A-float:A-">PointRoi(float[], float[])</a></span> - Constructor for class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Creates a new PointRoi using the specified float arrays of offscreen coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#PointRoi-ij.process.FloatPolygon-">PointRoi(FloatPolygon)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Creates a new PointRoi from a FloatPolygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#PointRoi-java.awt.Polygon-">PointRoi(Polygon)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Creates a new PointRoi from a Polygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#PointRoi-int-int-">PointRoi(int, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Creates a new PointRoi using the specified offscreen int coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#PointRoi-double-double-">PointRoi(double, double)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Creates a new PointRoi using the specified offscreen double coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#PointRoi-int-int-ij.ImagePlus-">PointRoi(int, int, ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Creates a new PointRoi using the specified screen coordinates.</div>
</dd>
<dt><a href="ij/plugin/PointToolOptions.html" title="class in ij.plugin"><span class="typeNameLink">PointToolOptions</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Edit/Options/Point Tool command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PointToolOptions.html#PointToolOptions--">PointToolOptions()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/PointToolOptions.html" title="class in ij.plugin">PointToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#POLY2">POLY2</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#POLY2">POLY2</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#POLY3">POLY3</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#POLY3">POLY3</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#POLY4">POLY4</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#POLY4">POLY4</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#POLY5">POLY5</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#POLY6">POLY6</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#POLY7">POLY7</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#POLY8">POLY8</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#POLYGON">POLYGON</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#POLYGON">POLYGON</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><a href="ij/process/PolygonFiller.html" title="class in ij.process"><span class="typeNameLink">PolygonFiller</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This class fills polygons using the scan-line filling algorithm
described at "http://www.cs.rit.edu/~icss571/filling/".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/PolygonFiller.html#PolygonFiller--">PolygonFiller()</a></span> - Constructor for class ij.process.<a href="ij/process/PolygonFiller.html" title="class in ij.process">PolygonFiller</a></dt>
<dd>
<div class="block">Constructs a PolygonFiller.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/PolygonFiller.html#PolygonFiller-int:A-int:A-int-">PolygonFiller(int[], int[], int)</a></span> - Constructor for class ij.process.<a href="ij/process/PolygonFiller.html" title="class in ij.process">PolygonFiller</a></dt>
<dd>
<div class="block">Constructs a PolygonFiller using the specified polygon.</div>
</dd>
<dt><a href="ij/gui/PolygonRoi.html" title="class in ij.gui"><span class="typeNameLink">PolygonRoi</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This class represents a polygon region of interest or polyline of interest.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#PolygonRoi-int:A-int:A-int-int-">PolygonRoi(int[], int[], int, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Creates a new polygon or polyline ROI from x and y coordinate arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#PolygonRoi-float:A-float:A-int-int-">PolygonRoi(float[], float[], int, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Creates a new polygon or polyline ROI from float x and y arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#PolygonRoi-float:A-float:A-int-">PolygonRoi(float[], float[], int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Creates a new polygon or polyline ROI from float x and y arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#PolygonRoi-java.awt.Polygon-int-">PolygonRoi(Polygon, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Creates a new polygon or polyline ROI from a Polygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#PolygonRoi-ij.process.FloatPolygon-int-">PolygonRoi(FloatPolygon, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Creates a new polygon or polyline ROI from a FloatPolygon.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#PolygonRoi-int:A-int:A-int-ij.ImagePlus-int-">PolygonRoi(int[], int[], int, ImagePlus, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span> </div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#PolygonRoi-int-int-ij.ImagePlus-">PolygonRoi(int, int, ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd>
<div class="block">Starts the process of creating a new user-generated polygon or polyline ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#POLYLINE">POLYLINE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#POLYLINE">POLYLINE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#populateList-java.lang.String-">populateList(String)</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#populateList-java.lang.String-">populateList(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#POSITION">POSITION</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#positionWindow--">positionWindow()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#POW">POW</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#POWER">POWER</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#POWER">POWER</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#POWER_REGRESSION">POWER_REGRESSION</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#powerOf2Size--">powerOf2Size()</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Returns true of this FHT contains a square image with a width that is a power of two.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#precision">precision</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#PREDEFINED_FUNCTION">PREDEFINED_FUNCTION</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#PREDICTOR">PREDICTOR</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageLayout.html#preferredLayoutSize-java.awt.Container-">preferredLayoutSize(Container)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageLayout.html" title="class in ij.gui">ImageLayout</a></dt>
<dd>
<div class="block">Returns the preferred dimensions for this layout.</div>
</dd>
<dt><a href="ij/Prefs.html" title="class in ij"><span class="typeNameLink">Prefs</span></a> - Class in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">This class contains the ImageJ preferences, which are
loaded from the "IJ_Props.txt" and "IJ_Prefs.txt" files.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#Prefs--">Prefs()</a></span> - Constructor for class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#PREFS_NAME">PREFS_NAME</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#previewRunning-boolean-">previewRunning(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Used by PlugInFilterRunner to provide visable feedback whether preview
is running or not by switching from "Preview" to "wait..."</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#previousRoi">previousRoi</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#PRINT">PRINT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Printer.html#print-java.awt.Graphics-java.awt.print.PageFormat-int-">print(Graphics, PageFormat, int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Printer.html" title="class in ij.plugin.filter">Printer</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/Printer.html" title="class in ij.plugin.filter"><span class="typeNameLink">Printer</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This plugin implements the File/Page Setup and File/Print commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Printer.html#Printer--">Printer()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Printer.html" title="class in ij.plugin.filter">Printer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#processStack">processStack</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#processWindowEvent-java.awt.event.WindowEvent-">processWindowEvent(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#processWindowEvent-java.awt.event.WindowEvent-">processWindowEvent(WindowEvent)</a></span> - Method in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#profile">profile</a></span> - Variable in class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd> </dd>
<dt><a href="ij/gui/ProfilePlot.html" title="class in ij.gui"><span class="typeNameLink">ProfilePlot</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">Creates a density profile plot of a rectangular selection or line selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#ProfilePlot--">ProfilePlot()</a></span> - Constructor for class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#ProfilePlot-ij.ImagePlus-">ProfilePlot(ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#ProfilePlot-ij.ImagePlus-boolean-">ProfilePlot(ImagePlus, boolean)</a></span> - Constructor for class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Profiler.html" title="class in ij.plugin"><span class="typeNameLink">Profiler</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Implements the Analyze/Plot Profile and Edit/Options/Profile Plot Options commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Profiler.html#Profiler--">Profiler()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Profiler.html" title="class in ij.plugin">Profiler</a></dt>
<dd> </dd>
<dt><a href="ij/macro/Program.html" title="class in ij.macro"><span class="typeNameLink">Program</span></a> - Class in <a href="ij/macro/package-summary.html">ij.macro</a></dt>
<dd>
<div class="block">An object of this type is a tokenized macro file and the associated symbol table.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Program.html#Program--">Program()</a></span> - Constructor for class ij.macro.<a href="ij/macro/Program.html" title="class in ij.macro">Program</a></dt>
<dd> </dd>
<dt><a href="ij/gui/ProgressBar.html" title="class in ij.gui"><span class="typeNameLink">ProgressBar</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This is the progress bar that is displayed in the lower right hand corner of
the ImageJ window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProgressBar.html#ProgressBar-int-int-">ProgressBar(int, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/ProgressBar.html" title="class in ij.gui">ProgressBar</a></dt>
<dd>
<div class="block">This constructor is called once by ImageJ at startup.</div>
</dd>
<dt><a href="ij/plugin/Projector.html" title="class in ij.plugin"><span class="typeNameLink">Projector</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin creates a sequence of projections of a rotating volume (stack of slices) onto a plane using
nearest-point (surface), brightest-point, or mean-value projection or a weighted combination of nearest-
point projection with either of the other two methods (partial opacity).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Projector.html#Projector--">Projector()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Projector.html" title="class in ij.plugin">Projector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#PROPERTY_KEY">PROPERTY_KEY</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">key in ImagePlus properties to access the plot behind an ImagePlus</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#PROPS_NAME">PROPS_NAME</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/ProxySettings.html" title="class in ij.plugin"><span class="typeNameLink">ProxySettings</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Plugins/Utilities/Proxy Settings command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ProxySettings.html#ProxySettings--">ProxySettings()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ProxySettings.html" title="class in ij.plugin">ProxySettings</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#PUT_PIXEL">PUT_PIXEL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#putBehind--">putBehind()</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Activates the next image window on the window list.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Slicer.html#putColumn-ij.process.ImageProcessor-int-int-float:A-int-">putColumn(ImageProcessor, int, int, float[], int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Slicer.html" title="class in ij.plugin">Slicer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#putColumn-int-int-int:A-int-">putColumn(int, int, int[], int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Inserts the pixels contained in 'data' into a
column starting at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#putPixel-int-int-int-">putPixel(int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Stores the specified value at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#putPixel-int-int-int:A-">putPixel(int, int, int[])</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Sets a pixel in the image using a 3 element (R, G and B)
int array of samples.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#putPixel-int-int-int-">putPixel(int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Stores the specified value at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#putPixel-int-int-int:A-">putPixel(int, int, int[])</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Sets a pixel in the image using a one element int array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#putPixel-int-int-int-">putPixel(int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Stores the specified value at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#putPixel-int-int-int:A-">putPixel(int, int, int[])</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets a pixel in the image using an int array of samples.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#putPixel-int-int-int-">putPixel(int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Stores the specified value at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#putPixel-int-int-int-">putPixel(int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Stores the specified value at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#putPixelValue-int-int-double-">putPixelValue(int, int, double)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Stores the specified real value at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#putPixelValue-int-int-double-">putPixelValue(int, int, double)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Stores the specified real grayscale value at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#putPixelValue-int-int-double-">putPixelValue(int, int, double)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Stores the specified real value at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#putPixelValue-int-int-double-">putPixelValue(int, int, double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Stores the specified value at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#putPixelValue-int-int-double-">putPixelValue(int, int, double)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Stores the specified real value at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Slicer.html#putRow-ij.process.ImageProcessor-int-int-float:A-int-">putRow(ImageProcessor, int, int, float[], int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Slicer.html" title="class in ij.plugin">Slicer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#putRow-int-int-int:A-int-">putRow(int, int, int[], int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Inserts the pixels contained in 'data' into a
horizontal line starting at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#putRow-int-int-float:A-int-">putRow(int, int, float[], int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Inserts the pixels contained in 'data' into a
horizontal line starting at (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/ArrayUtil.html#putValue-int-float-">putValue(int, float)</a></span> - Method in class ij.util.<a href="ij/util/ArrayUtil.html" title="class in ij.util">ArrayUtil</a></dt>
<dd>
<div class="block">put a value to a index</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#pw">pw</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
</dl>
<a name="I:Q">
<!-- -->
</a>
<h2 class="title">Q</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#quadrantSwapNeeded">quadrantSwapNeeded</a></span> - Variable in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Used by the FFT class.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#quit--">quit()</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Called by ImageJ when the user selects Quit.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#quitting--">quitting()</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Returns true if ImageJ is exiting.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#quittingViaMacro--">quittingViaMacro()</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Returns true if ImageJ is quitting as a result of a run("Quit") macro call.</div>
</dd>
</dl>
<a name="I:R">
<!-- -->
</a>
<h2 class="title">R</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#radioButtonGroups">radioButtonGroups</a></span> - Variable in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/SaltAndPepper.html#rand-int-int-">rand(int, int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/SaltAndPepper.html" title="class in ij.plugin.filter">SaltAndPepper</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#RANDOM">RANDOM</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><a href="ij/io/RandomAccessStream.html" title="class in ij.io"><span class="typeNameLink">RandomAccessStream</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">This class uses a memory cache to allow seeking within
an InputStream.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RandomAccessStream.html#RandomAccessStream-java.io.InputStream-">RandomAccessStream(InputStream)</a></span> - Constructor for class ij.io.<a href="ij/io/RandomAccessStream.html" title="class in ij.io">RandomAccessStream</a></dt>
<dd>
<div class="block">Constructs a RandomAccessStream from an InputStream.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RandomAccessStream.html#RandomAccessStream-java.io.RandomAccessFile-">RandomAccessStream(RandomAccessFile)</a></span> - Constructor for class ij.io.<a href="ij/io/RandomAccessStream.html" title="class in ij.io">RandomAccessStream</a></dt>
<dd>
<div class="block">Constructs a RandomAccessStream from an RandomAccessFile.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#rank-ij.process.ImageProcessor-double-int-">rank(ImageProcessor, double, int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd>
<div class="block">Filters an image by any method except 'despecle' or 'remove outliers'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#rank-ij.process.ImageProcessor-double-int-int-float-">rank(ImageProcessor, double, int, int, float)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd>
<div class="block">Filters an image by any method except 'despecle' (for 'despeckle', use 'median' and radius=1)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#rank-double:A-">rank(double[])</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd>
<div class="block">Returns a sorted list of indices of the specified double array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#rank-java.lang.String:A-">rank(String[])</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd>
<div class="block">Returns a sorted list of indices of the specified String array.</div>
</dd>
<dt><a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter"><span class="typeNameLink">RankFilters</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This plugin implements the Mean, Minimum, Maximum, Variance, Median, Open Maxima, Close Maxima,
Remove Outliers, Remove NaNs and Despeckle commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#RankFilters--">RankFilters()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#raster">raster</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#RAW">RAW</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#RAW">RAW</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Raw.html" title="class in ij.plugin"><span class="typeNameLink">Raw</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the File/Import/Raw command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Raw.html#Raw--">Raw()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Raw.html" title="class in ij.plugin">Raw</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#RAW_INTEGRATED_DENSITY">RAW_INTEGRATED_DENSITY</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#rc2DFHT-float:A-boolean-int-">rc2DFHT(float[], boolean, int)</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Performs a 2D FHT (Fast Hartley Transform).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RandomAccessStream.html#read--">read()</a></span> - Method in class ij.io.<a href="ij/io/RandomAccessStream.html" title="class in ij.io">RandomAccessStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RandomAccessStream.html#read-byte:A-int-int-">read(byte[], int, int)</a></span> - Method in class ij.io.<a href="ij/io/RandomAccessStream.html" title="class in ij.io">RandomAccessStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RandomAccessStream.html#readDouble--">readDouble()</a></span> - Method in class ij.io.<a href="ij/io/RandomAccessStream.html" title="class in ij.io">RandomAccessStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RandomAccessStream.html#readFloat--">readFloat()</a></span> - Method in class ij.io.<a href="ij/io/RandomAccessStream.html" title="class in ij.io">RandomAccessStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RandomAccessStream.html#readFully-byte:A-">readFully(byte[])</a></span> - Method in class ij.io.<a href="ij/io/RandomAccessStream.html" title="class in ij.io">RandomAccessStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RandomAccessStream.html#readFully-byte:A-int-">readFully(byte[], int)</a></span> - Method in class ij.io.<a href="ij/io/RandomAccessStream.html" title="class in ij.io">RandomAccessStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RandomAccessStream.html#readInt--">readInt()</a></span> - Method in class ij.io.<a href="ij/io/RandomAccessStream.html" title="class in ij.io">RandomAccessStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RandomAccessStream.html#readLong--">readLong()</a></span> - Method in class ij.io.<a href="ij/io/RandomAccessStream.html" title="class in ij.io">RandomAccessStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/ImageReader.html#readPixels-java.io.InputStream-">readPixels(InputStream)</a></span> - Method in class ij.io.<a href="ij/io/ImageReader.html" title="class in ij.io">ImageReader</a></dt>
<dd>
<div class="block">Reads the image from the InputStream and returns the pixel
array (byte, short, int or float).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/ImageReader.html#readPixels-java.io.InputStream-long-">readPixels(InputStream, long)</a></span> - Method in class ij.io.<a href="ij/io/ImageReader.html" title="class in ij.io">ImageReader</a></dt>
<dd>
<div class="block">Skips the specified number of bytes, then reads an image and
returns the pixel array (byte, short, int or float).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/ImageReader.html#readPixels-java.lang.String-">readPixels(String)</a></span> - Method in class ij.io.<a href="ij/io/ImageReader.html" title="class in ij.io">ImageReader</a></dt>
<dd>
<div class="block">Reads the image from a URL and returns the pixel array (byte,
short, int or float).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RandomAccessStream.html#readShort--">readShort()</a></span> - Method in class ij.io.<a href="ij/io/RandomAccessStream.html" title="class in ij.io">RandomAccessStream</a></dt>
<dd> </dd>
<dt><a href="ij/RecentOpener.html" title="class in ij"><span class="typeNameLink">RecentOpener</span></a> - Class in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">Opens, in a separate thread, files selected from the File/Open Recent submenu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#record">record</a></span> - Static variable in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd>
<div class="block">This variable is true if the recorder is running.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#record-java.lang.String-">record(String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#record-java.lang.String-java.lang.String-">record(String, String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#record-java.lang.String-java.lang.String-java.lang.String-">record(String, String, String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#record-java.lang.String-java.lang.String-java.lang.String-java.lang.String-">record(String, String, String, String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#record-java.lang.String-int-">record(String, int)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#record-java.lang.String-int-int-">record(String, int, int)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#record-java.lang.String-int-int-java.lang.String-">record(String, int, int, String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#record-java.lang.String-double-double-">record(String, double, double)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#record-java.lang.String-int-int-int-">record(String, int, int, int)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#record-java.lang.String-java.lang.String-int-">record(String, String, int)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#record-java.lang.String-java.lang.String-int-int-">record(String, String, int, int)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#record-java.lang.String-int-int-int-int-">record(String, int, int, int, int)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#record-java.lang.String-int-int-int-int-int-">record(String, int, int, int, int, int)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#record-java.lang.String-int-int-int-int-double-">record(String, int, int, int, int, double)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#record-java.lang.String-java.lang.String-java.lang.String-int-int-int-int-int-">record(String, String, String, int, int, int, int, int)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#RECORD_STARTS">RECORD_STARTS</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Record starting coordinates so outline can be recreated later using doWand(x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#recordCall-java.lang.String-">recordCall(String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#recordCall-java.lang.String-java.lang.String-">recordCall(String, String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame"><span class="typeNameLink">Recorder</span></a> - Class in <a href="ij/plugin/frame/package-summary.html">ij.plugin.frame</a></dt>
<dd>
<div class="block">This is ImageJ's macro recorder.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#Recorder--">Recorder()</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#Recorder-boolean-">Recorder(boolean)</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#recordInMacros">recordInMacros</a></span> - Static variable in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd>
<div class="block">Set this variable true to allow recording within IJ.run() calls.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#recordOption-java.lang.String-java.lang.String-">recordOption(String, String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#recordOption-java.lang.String-">recordOption(String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#recordPath-java.lang.String-java.lang.String-">recordPath(String, String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#recordRoi-ij.gui.Roi-">recordRoi(Roi)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#recordRoi-java.awt.Polygon-int-">recordRoi(Polygon, int)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#recordScriptRoi-java.awt.Polygon-int-">recordScriptRoi(Polygon, int)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#recordStarts">recordStarts</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#recordString-java.lang.String-">recordString(String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#RECT">RECT</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#RECT_ROI">RECT_ROI</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#RECTANGLE">RECTANGLE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#RECTANGLE">RECTANGLE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/RectToolOptions.html" title="class in ij.plugin"><span class="typeNameLink">RectToolOptions</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the rounded rectangle tool dialog box.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RectToolOptions.html#RectToolOptions--">RectToolOptions()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/RectToolOptions.html" title="class in ij.plugin">RectToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RGBStackSplitter.html#red">red</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/RGBStackSplitter.html" title="class in ij.plugin.filter">RGBStackSplitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#RED_LUT">RED_LUT</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#redirectErrorMessages--">redirectErrorMessages()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Causes IJ.error() output to be temporarily redirected to the "Log" window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#redirectErrorMessages-boolean-">redirectErrorMessages(boolean)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Set 'true' and IJ.error() output will be temporarily redirected to the "Log" window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#redirectingErrorMessages--">redirectingErrorMessages()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns the state of the 'redirectErrorMessages' flag, which is set by File/Import/Image Sequence.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/LogStream.html#redirectSystem-boolean-">redirectSystem(boolean)</a></span> - Static method in class ij.io.<a href="ij/io/LogStream.html" title="class in ij.io">LogStream</a></dt>
<dd>
<div class="block">Redirects all output sent to <code>System.out</code> and <code>System.err</code> to ImageJ's log console
using the default prefixes.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/LogStream.html#redirectSystem--">redirectSystem()</a></span> - Static method in class ij.io.<a href="ij/io/LogStream.html" title="class in ij.io">LogStream</a></dt>
<dd>
<div class="block">Redirects all output sent to <code>System.out</code> and <code>System.err</code> to ImageJ's log console
using the default prefixes.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/LogStream.html#redirectSystemErr-java.lang.String-">redirectSystemErr(String)</a></span> - Static method in class ij.io.<a href="ij/io/LogStream.html" title="class in ij.io">LogStream</a></dt>
<dd>
<div class="block">Redirects all output sent to <code>System.err</code> to ImageJ's log console.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/LogStream.html#redirectSystemOut-java.lang.String-">redirectSystemOut(String)</a></span> - Static method in class ij.io.<a href="ij/io/LogStream.html" title="class in ij.io">LogStream</a></dt>
<dd>
<div class="block">Redirects all output sent to <code>System.out</code> to ImageJ's log console.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#reds">reds</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackReducer.html#reduce-ij.ImagePlus-">reduce(ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/HyperStackReducer.html" title="class in ij.plugin">HyperStackReducer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackReducer.html#reduceHyperstack-ij.ImagePlus-int-boolean-">reduceHyperstack(ImagePlus, int, boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackReducer.html" title="class in ij.plugin">StackReducer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackReducer.html#reduceStack-ij.ImagePlus-int-">reduceStack(ImagePlus, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackReducer.html" title="class in ij.plugin">StackReducer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#reflexAngle">reflexAngle</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Angle tool measures reflex angle</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#register-java.lang.Class-">register(Class)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Adds the specified class to a Vector to keep it from being garbage
collected, which would cause the classes static fields to be reset.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#register-java.lang.Class-">register(Class)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Adds the specified class to a Vector to keep it from being
garbage collected, causing static fields to be reset.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Functions.html#registerExtensions-ij.macro.MacroExtension-">registerExtensions(MacroExtension)</a></span> - Static method in class ij.macro.<a href="ij/macro/Functions.html" title="class in ij.macro">Functions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#REINITIALIZATION_FAILURE">REINITIALIZATION_FAILURE</a></span> - Static variable in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Status returned: Could not reinitialize the simplex because all attempts to find restarting
parameters resulted in the target function returning NaN.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.PointIterator.html#remove--">remove()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.PointIterator.html" title="class in ij.gui">Line.PointIterator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#remove-int-">remove(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Removes the ROI with the specified index from this Overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#remove-ij.gui.Roi-">remove(Roi)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Removes the specified ROI from this Overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#remove-java.lang.String-">remove(String)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Removes all ROIs that have the specified name.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#REMOVE_NAN">REMOVE_NAN</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#removeAdjustmentListener-java.awt.event.AdjustmentListener-">removeAdjustmentListener(AdjustmentListener)</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#removeBatchModeImage-ij.ImagePlus-">removeBatchModeImage(ImagePlus)</a></span> - Static method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Executer.html#removeCommandListener-ij.CommandListener-">removeCommandListener(CommandListener)</a></span> - Static method in class ij.<a href="ij/Executer.html" title="class in ij">Executer</a></dt>
<dd>
<div class="block">Removes the specified command listener.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#removeEventListener-ij.IJEventListener-">removeEventListener(IJEventListener)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#removeImageListener-ij.ImageListener-">removeImageListener(ImageListener)</a></span> - Static method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#removeKeyListener-java.awt.event.KeyListener-">removeKeyListener(KeyListener)</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageLayout.html#removeLayoutComponent-java.awt.Component-">removeLayoutComponent(Component)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageLayout.html" title="class in ij.gui">ImageLayout</a></dt>
<dd>
<div class="block">Not used by this class.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#removeMacroTools--">removeMacroTools()</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#removeRoiListener-ij.gui.RoiListener-">removeRoiListener(RoiListener)</a></span> - Static method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#removeSplineFit--">removeSplineFit()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#removeWindow-java.awt.Window-">removeWindow(Window)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Removes the specified window from the Window menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#removeWindow-java.awt.Frame-">removeWindow(Frame)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Removes the specified Frame from the Window menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#RENAME">RENAME</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#rename-int-java.lang.String-">rename(int, String)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#rename-java.lang.String-">rename(String)</a></span> - Method in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#renameResults-java.lang.String-">renameResults(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Renames a results window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#renameResults-java.lang.String-java.lang.String-">renameResults(String, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Changes the name of a results window from 'oldTitle' to 'newTitle'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#repaint--">repaint()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#repaintImageWindows--">repaintImageWindows()</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Repaints all open image windows.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#repaintWindow--">repaintWindow()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Calls draw to draw the image and also repaints the
image window to force the information displayed above
the image (dimension, type, size) to be updated.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#REPLACE">REPLACE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#requireControlKey">requireControlKey</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Require control or command key for keybaord shortcuts.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#REQUIRES">REQUIRES</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#reset--">reset()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#RESET">RESET</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#reset--">reset()</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#reset--">reset()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Clears this RoiManager so that it contains no ROIs.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#reset--">reset()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Reset the image from snapshot.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#reset-ij.process.ImageProcessor-">reset(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Restore pixels that are within roi but not part of mask.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#reset--">reset()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#reset-ij.process.ImageProcessor-">reset(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#reset--">reset()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#reset-ij.process.ImageProcessor-">reset(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#reset--">reset()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Restores the pixel data from the snapshot (undo) buffer.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#reset-ij.process.ImageProcessor-">reset(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Restores pixels from the snapshot buffer that are
within the rectangular roi but not part of the mask.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#reset--">reset()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#reset-ij.process.ImageProcessor-">reset(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Undo.html#reset--">reset()</a></span> - Static method in class ij.<a href="ij/Undo.html" title="class in ij">Undo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#RESET_MIN_MAX">RESET_MIN_MAX</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#RESET_THRESHOLD">RESET_THRESHOLD</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#resetBinaryThreshold--">resetBinaryThreshold()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Resets the threshold if minThreshold=maxThreshold and lutUpdateMode=NO_LUT_UPDATE.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#resetBoundingRect--">resetBoundingRect()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#resetClassLoader--">resetClassLoader()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#resetClipboard--">resetClipboard()</a></span> - Static method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Clears the internal clipboard.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#resetCounter--">resetCounter()</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Sets the measurement counter to zero.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#resetCounter">resetCounter</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#resetCounters--">resetCounters()</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#resetDisplayRange--">resetDisplayRange()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#resetDisplayRange--">resetDisplayRange()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#resetDisplayRanges--">resetDisplayRanges()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#resetDoubleBuffer--">resetDoubleBuffer()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#resetEscape--">resetEscape()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">This method sets the <code>Esc</code> key to the "up" position.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#resetMinAndMax--">resetMinAndMax()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Resets the minimum and maximum displayed pixel values of the
current image to be the same as the min and max pixel values.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#resetMinAndMax-ij.ImagePlus-">resetMinAndMax(ImagePlus)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Resets the minimum and maximum displayed pixel values of the
specified image to be the same as the min and max pixel values.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#resetMinAndMax--">resetMinAndMax()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Resets this image's LUT.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#resetMinAndMax--">resetMinAndMax()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Recalculates the min and max values used to scale pixel
values to 0-255 for display.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#resetMinAndMax--">resetMinAndMax()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">For short and float images, recalculates the min and max
image values needed to correctly display the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#resetMinAndMax--">resetMinAndMax()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Recalculates the min and max values used to scale pixel
values to 0-255 for display.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#resetMultiMeasureResults--">resetMultiMeasureResults()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/GaussianBlur.html#resetOutOfRoi-ij.process.ImageProcessor-int-">resetOutOfRoi(ImageProcessor, int)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/GaussianBlur.html" title="class in ij.plugin.filter">GaussianBlur</a></dt>
<dd>
<div class="block">Set the processed pixels above and below the roi rectangle back to their
previous value (i.e., snapshot buffer).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#resetPreferences--">resetPreferences()</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Delete the preferences file when ImageJ quits.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#resetRoi--">resetRoi()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets the ROI (Region of Interest) and clipping rectangle to the entire image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#resetSelection--">resetSelection()</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Clears the selection, if any.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#resetStack--">resetStack()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#resetThreshold--">resetThreshold()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Disables thresholding on the current image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#resetThreshold-ij.ImagePlus-">resetThreshold(ImagePlus)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Disables thresholding on the specified image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#resetThreshold--">resetThreshold()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Disables thresholding.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#resize-int-int-">resize(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Creates a new ByteProcessor containing a scaled copy of this image or selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#resize-int-int-">resize(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Creates a new ColorProcessor containing a scaled copy of this image or selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#resize-int-int-">resize(int, int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Creates a new FloatProcessor containing a scaled copy of this image or selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#resize-int-int-">resize(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a new ImageProcessor containing a scaled copy of this image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#resize-int-">resize(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a new ImageProcessor containing a scaled copy
of this image or ROI, with the aspect ratio maintained.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#resize-int-int-boolean-">resize(int, int, boolean)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a new ImageProcessor containing a scaled copy of this image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#resize-int-int-">resize(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Creates a new ShortProcessor containing a scaled copy of this image or selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#resize-int-int-">resize(int, int)</a></span> - Method in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd>
<div class="block">Creates a new stack with dimensions 'newWidth' x 'newHeight'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#resize-int-int-boolean-">resize(int, int, boolean)</a></span> - Method in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#resizeLinearly-int-int-">resizeLinearly(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Use linear interpolation to resize images that have a width or height of one.</div>
</dd>
<dt><a href="ij/plugin/Resizer.html" title="class in ij.plugin"><span class="typeNameLink">Resizer</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Edit/Crop and Image/Adjust/Size commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Resizer.html#Resizer--">Resizer()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Resizer.html" title="class in ij.plugin">Resizer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#RESIZING">RESIZING</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Slicer.html#reslice-ij.ImagePlus-">reslice(ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Slicer.html" title="class in ij.plugin">Slicer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#RESOLUTION_UNIT">RESOLUTION_UNIT</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#RESTORE_PREVIOUS_TOOL">RESTORE_PREVIOUS_TOOL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#RESTORE_SETTINGS">RESTORE_SETTINGS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#restorePreviousTool--">restorePreviousTool()</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#restoreRoi--">restoreRoi()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#restoreTools--">restoreTools()</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/ResultsSorter.html" title="class in ij.plugin"><span class="typeNameLink">ResultsSorter</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Results Table's Sort command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ResultsSorter.html#ResultsSorter--">ResultsSorter()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ResultsSorter.html" title="class in ij.plugin">ResultsSorter</a></dt>
<dd> </dd>
<dt><a href="ij/measure/ResultsTable.html" title="class in ij.measure"><span class="typeNameLink">ResultsTable</span></a> - Class in <a href="ij/measure/package-summary.html">ij.measure</a></dt>
<dd>
<div class="block">This is a table for storing measurement results and strings as columns of values.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#ResultsTable--">ResultsTable()</a></span> - Constructor for class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Constructs an empty ResultsTable with the counter=0, no columns
and the precision set to 3 or the "Decimal places" value in
Analyze/Set Measurements if that value is higher than 3.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#RETURN">RETURN</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#reverseNextPreviousOrder">reverseNextPreviousOrder</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Reverse channel-slice-frame priority used by Next Slice and Previous Slice commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#revert--">revert()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Implements the File/Revert command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#revert--">revert()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/LogStream.html#revertSystem--">revertSystem()</a></span> - Static method in class ij.io.<a href="ij/io/LogStream.html" title="class in ij.io">LogStream</a></dt>
<dd>
<div class="block">Use this method to revert both <code>System.out</code> and <code>System.err</code>
to their original output streams.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/LogStream.html#revertSystemErr--">revertSystemErr()</a></span> - Static method in class ij.io.<a href="ij/io/LogStream.html" title="class in ij.io">LogStream</a></dt>
<dd>
<div class="block">Use this method to revert<code>System.err</code>
to the original output stream.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/LogStream.html#revertSystemOut--">revertSystemOut()</a></span> - Static method in class ij.io.<a href="ij/io/LogStream.html" title="class in ij.io">LogStream</a></dt>
<dd>
<div class="block">Use this method to revert<code>System.out</code>
to the original output stream.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileOpener.html#revertToSaved-ij.ImagePlus-">revertToSaved(ImagePlus)</a></span> - Method in class ij.io.<a href="ij/io/FileOpener.html" title="class in ij.io">FileOpener</a></dt>
<dd>
<div class="block">Restores the original version of the specified image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#rgb">rgb</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#RGB">RGB</a></span> - Static variable in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#RGB">RGB</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">24-bit interleaved RGB.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#rgb">rgb</a></span> - Variable in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Used by the FFT class.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#RGB48">RGB48</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">48-bit interleaved RGB.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#RGB48_PLANAR">RGB48_PLANAR</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">48-bit planar RGB.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#RGB_DILATE">RGB_DILATE</a></span> - Static variable in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#RGB_ERODE">RGB_ERODE</a></span> - Static variable in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#RGB_FIND_EDGES">RGB_FIND_EDGES</a></span> - Static variable in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#RGB_MAX">RGB_MAX</a></span> - Static variable in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#RGB_MEDIAN">RGB_MEDIAN</a></span> - Static variable in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#RGB_MIN">RGB_MIN</a></span> - Static variable in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#RGB_NOISE">RGB_NOISE</a></span> - Static variable in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#RGB_PLANAR">RGB_PLANAR</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd>
<div class="block">24-bit planer RGB.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#RGB_RESIZE">RGB_RESIZE</a></span> - Static variable in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#RGB_ROTATE">RGB_ROTATE</a></span> - Static variable in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#RGB_SCALE">RGB_SCALE</a></span> - Static variable in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#RGB_THRESHOLD">RGB_THRESHOLD</a></span> - Static variable in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#RGB_TRANSLATE">RGB_TRANSLATE</a></span> - Static variable in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/RGBStackConverter.html" title="class in ij.plugin"><span class="typeNameLink">RGBStackConverter</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Converts a 2 or 3 slice stack, or a hyperstack, to RGB.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RGBStackConverter.html#RGBStackConverter--">RGBStackConverter()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/RGBStackConverter.html" title="class in ij.plugin">RGBStackConverter</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/RGBStackMerge.html" title="class in ij.plugin"><span class="typeNameLink">RGBStackMerge</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Image/Color/Merge Channels command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RGBStackMerge.html#RGBStackMerge--">RGBStackMerge()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/RGBStackMerge.html" title="class in ij.plugin">RGBStackMerge</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/RGBStackSplitter.html" title="class in ij.plugin.filter"><span class="typeNameLink">RGBStackSplitter</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">Deprecated; replaced by ij.plugin.ChannelSplitter.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RGBStackSplitter.html#RGBStackSplitter--">RGBStackSplitter()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/RGBStackSplitter.html" title="class in ij.plugin.filter">RGBStackSplitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#RGBtoHSB-int-int-int-">RGBtoHSB(int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#RGBtoHSB-int:A-">RGBtoHSB(int[])</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ColorThresholder.html#RGBtoLab--">RGBtoLab()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/ColorThresholder.html" title="class in ij.plugin.frame">ColorThresholder</a></dt>
<dd>
<div class="block">Converts the current image from RGB to CIE L*a*b* and stores the results
in the same RGB image R=L*, G=a*, B=b*.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#RGBtoLAB-int-">RGBtoLAB(int)</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#RGBtoLAB-int:A-">RGBtoLAB(int[])</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#RGBToLab-ij.ImagePlus-">RGBToLab(ImagePlus)</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">Converts an RGB image into a Lab stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#RGBtoXYZ-int-int-int-">RGBtoXYZ(int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">Convert RGB to XYZ</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#RGBtoXYZ-int:A-">RGBtoXYZ(int[])</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">Convert RGB to XYZ</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ColorThresholder.html#RGBtoYUV--">RGBtoYUV()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/ColorThresholder.html" title="class in ij.plugin.frame">ColorThresholder</a></dt>
<dd>
<div class="block">Converts the current image from RGB to YUV and stores
the results in the same RGB image R=Y, G=U, B=V.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#rh">rh</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#RIGHT">RIGHT</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Text justification.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#RIGHT">RIGHT</a></span> - Static variable in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#RIGHT">RIGHT</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#RIGHT_JUSTIFY">RIGHT_JUSTIFY</a></span> - Static variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Right justify text.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#RIGHT_MARGIN">RIGHT_MARGIN</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">Not a fixed value any more, use getDrawingFrame() to get the drawing area</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#rLUT1">rLUT1</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#rLUT2">rLUT2</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#RODBARD">RODBARD</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#RODBARD">RODBARD</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#RODBARD2">RODBARD2</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#RODBARD2">RODBARD2</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><a href="ij/gui/Roi.html" title="class in ij.gui"><span class="typeNameLink">Roi</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">A rectangular region of interest and superclass for the other ROI classes.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#Roi-int-int-int-int-">Roi(int, int, int, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Creates a rectangular ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#Roi-double-double-double-double-">Roi(double, double, double, double)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Creates a rectangular ROI using double arguments.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#Roi-int-int-int-int-int-">Roi(int, int, int, int, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Creates a new rounded rectangular ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#Roi-double-double-double-double-int-">Roi(double, double, double, double, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Creates a rounded rectangular ROI using double arguments.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#Roi-java.awt.Rectangle-">Roi(Rectangle)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Creates a new rectangular Roi.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#Roi-int-int-ij.ImagePlus-">Roi(int, int, ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Starts the process of creating a user-defined rectangular Roi,
where sx and sy are the starting screen coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#Roi-int-int-ij.ImagePlus-int-">Roi(int, int, ImagePlus, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Starts the process of creating a user-defined rectangular Roi,
where sx and sy are the starting screen coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#Roi-int-int-int-int-ij.ImagePlus-">Roi(int, int, int, int, ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span> </div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#roi">roi</a></span> - Variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#roi">roi</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#ROI">ROI</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#ROI">ROI</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Undo.html#ROI">ROI</a></span> - Static variable in class ij.<a href="ij/Undo.html" title="class in ij">Undo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#ROI_HEIGHT">ROI_HEIGHT</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#ROI_MANAGER">ROI_MANAGER</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#ROI_MASKS">ROI_MASKS</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#ROI_PROPS_LENGTH">ROI_PROPS_LENGTH</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#ROI_PROPS_OFFSET">ROI_PROPS_OFFSET</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#ROI_REQUIRED">ROI_REQUIRED</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the filter requires an ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#ROI_WIDTH">ROI_WIDTH</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#ROI_X">ROI_X</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#ROI_Y">ROI_Y</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#ROIColor">ROIColor</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#ROICOLOR">ROICOLOR</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><a href="ij/io/RoiDecoder.html" title="class in ij.io"><span class="typeNameLink">RoiDecoder</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">Decodes an ImageJ, NIH Image or Scion Image ROI file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#RoiDecoder-java.lang.String-">RoiDecoder(String)</a></span> - Constructor for class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd>
<div class="block">Constructs an RoiDecoder using a file path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#RoiDecoder-byte:A-java.lang.String-">RoiDecoder(byte[], String)</a></span> - Constructor for class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd>
<div class="block">Constructs an RoiDecoder using a byte array.</div>
</dd>
<dt><a href="ij/io/RoiEncoder.html" title="class in ij.io"><span class="typeNameLink">RoiEncoder</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">Saves an ROI to a file or stream.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiEncoder.html#RoiEncoder-java.lang.String-">RoiEncoder(String)</a></span> - Constructor for class ij.io.<a href="ij/io/RoiEncoder.html" title="class in ij.io">RoiEncoder</a></dt>
<dd>
<div class="block">Creates an RoiEncoder using the specified path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiEncoder.html#RoiEncoder-java.io.OutputStream-">RoiEncoder(OutputStream)</a></span> - Constructor for class ij.io.<a href="ij/io/RoiEncoder.html" title="class in ij.io">RoiEncoder</a></dt>
<dd>
<div class="block">Creates an RoiEncoder using the specified OutputStream.</div>
</dd>
<dt><a href="ij/plugin/RoiEnlarger.html" title="class in ij.plugin"><span class="typeNameLink">RoiEnlarger</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin, which enlarges or shrinks selections, implements the Edit/Selection/Enlarge command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiEnlarger.html#RoiEnlarger--">RoiEnlarger()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/RoiEnlarger.html" title="class in ij.plugin">RoiEnlarger</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#roiHeight">roiHeight</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#roiHeight">roiHeight</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/RoiInterpolator.html" title="class in ij.plugin"><span class="typeNameLink">RoiInterpolator</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This class interpolates between ROIs in the ROI Manager.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiInterpolator.html#RoiInterpolator--">RoiInterpolator()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/RoiInterpolator.html" title="class in ij.plugin">RoiInterpolator</a></dt>
<dd> </dd>
<dt><a href="ij/gui/RoiListener.html" title="interface in ij.gui"><span class="typeNameLink">RoiListener</span></a> - Interface in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">Plugins that implement this interface are notified when
an ROI is created, modified or deleted.</div>
</dd>
<dt><a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame"><span class="typeNameLink">RoiManager</span></a> - Class in <a href="ij/plugin/frame/package-summary.html">ij.plugin.frame</a></dt>
<dd>
<div class="block">This plugin implements the Analyze/Tools/ROI Manager command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#RoiManager--">RoiManager()</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Opens the "ROI Manager" window, or activates it if it is already open.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#RoiManager-boolean-">RoiManager(boolean)</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#roiManagerSelect-ij.gui.Roi-boolean-">roiManagerSelect(Roi, boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#roiModified-ij.ImagePlus-int-">roiModified(ImagePlus, int)</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#roiModified-ij.ImagePlus-int-">roiModified(ImagePlus, int)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">For live plots, update the plot if the ROI of the source image changes</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/RoiListener.html#roiModified-ij.ImagePlus-int-">roiModified(ImagePlus, int)</a></span> - Method in interface ij.gui.<a href="ij/gui/RoiListener.html" title="interface in ij.gui">RoiListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/EventListener.html#roiModified-ij.ImagePlus-int-">roiModified(ImagePlus, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/EventListener.html" title="class in ij.plugin">EventListener</a></dt>
<dd> </dd>
<dt><a href="ij/gui/RoiProperties.html" title="class in ij.gui"><span class="typeNameLink">RoiProperties</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">Displays a dialog that allows the user to specify ROI properties such as color and line width.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/RoiProperties.html#RoiProperties-java.lang.String-ij.gui.Roi-">RoiProperties(String, Roi)</a></span> - Constructor for class ij.gui.<a href="ij/gui/RoiProperties.html" title="class in ij.gui">RoiProperties</a></dt>
<dd>
<div class="block">Constructs a ColorChooser using the specified title and initial color.</div>
</dd>
<dt><a href="ij/plugin/RoiReader.html" title="class in ij.plugin"><span class="typeNameLink">RoiReader</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Opens ImageJ, NIH Image and Scion Image for windows ROI outlines.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiReader.html#RoiReader--">RoiReader()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/RoiReader.html" title="class in ij.plugin">RoiReader</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/tool/RoiRotationTool.html" title="class in ij.plugin.tool"><span class="typeNameLink">RoiRotationTool</span></a> - Class in <a href="ij/plugin/tool/package-summary.html">ij.plugin.tool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/RoiRotationTool.html#RoiRotationTool--">RoiRotationTool()</a></span> - Constructor for class ij.plugin.tool.<a href="ij/plugin/tool/RoiRotationTool.html" title="class in ij.plugin.tool">RoiRotationTool</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/RoiRotator.html" title="class in ij.plugin"><span class="typeNameLink">RoiRotator</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Edit/Selection/Rotate command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiRotator.html#RoiRotator--">RoiRotator()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/RoiRotator.html" title="class in ij.plugin">RoiRotator</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/RoiScaler.html" title="class in ij.plugin"><span class="typeNameLink">RoiScaler</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Edit/Selection/Scale command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiScaler.html#RoiScaler--">RoiScaler()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/RoiScaler.html" title="class in ij.plugin">RoiScaler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#roiWidth">roiWidth</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#roiWidth">roiWidth</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/RoiWriter.html" title="class in ij.plugin.filter"><span class="typeNameLink">RoiWriter</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">Saves the current ROI outline to a file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RoiWriter.html#RoiWriter--">RoiWriter()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/RoiWriter.html" title="class in ij.plugin.filter">RoiWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#roiX">roiX</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#roiX">roiX</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#roiY">roiY</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#roiY">roiY</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/BackgroundSubtracter.html#rollingBallBackground-ij.process.ImageProcessor-double-boolean-boolean-boolean-boolean-boolean-">rollingBallBackground(ImageProcessor, double, boolean, boolean, boolean, boolean, boolean)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/BackgroundSubtracter.html" title="class in ij.plugin.filter">BackgroundSubtracter</a></dt>
<dd>
<div class="block">Create or subtract a background, works for all image types.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/BackgroundSubtracter.html#rollingBallBrightnessBackground-ij.process.ColorProcessor-double-boolean-boolean-boolean-boolean-boolean-">rollingBallBrightnessBackground(ColorProcessor, double, boolean, boolean, boolean, boolean, boolean)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/BackgroundSubtracter.html" title="class in ij.plugin.filter">BackgroundSubtracter</a></dt>
<dd>
<div class="block">Create or subtract a background, based on the brightness of an RGB image (keeping
the hue of each pixel unchanged)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageRoi.html#rotate-double-">rotate(double)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageRoi.html" title="class in ij.gui">ImageRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiRotator.html#rotate-ij.gui.Roi-double-">rotate(Roi, double)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/RoiRotator.html" title="class in ij.plugin">RoiRotator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiRotator.html#rotate-ij.gui.Roi-double-double-double-">rotate(Roi, double, double, double)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/RoiRotator.html" title="class in ij.plugin">RoiRotator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#rotate-double-">rotate(double)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Rotates the image or ROI 'angle' degrees clockwise.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#rotate-double-">rotate(double)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Rotates the image or ROI 'angle' degrees clockwise.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#rotate-double-">rotate(double)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Rotates the image or ROI 'angle' degrees clockwise.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#rotate-double-">rotate(double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Rotates the image or selection 'angle' degrees clockwise.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#rotate-double-">rotate(double)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Rotates the image or ROI 'angle' degrees clockwise.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#ROTATED_RECT">ROTATED_RECT</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#ROTATED_RECT_ROI">ROTATED_RECT_ROI</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><a href="ij/gui/RotatedRectRoi.html" title="class in ij.gui"><span class="typeNameLink">RotatedRectRoi</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This class implements the rotated rectangle selection tool.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/RotatedRectRoi.html#RotatedRectRoi-double-double-double-double-double-">RotatedRectRoi(double, double, double, double, double)</a></span> - Constructor for class ij.gui.<a href="ij/gui/RotatedRectRoi.html" title="class in ij.gui">RotatedRectRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/RotatedRectRoi.html#RotatedRectRoi-int-int-ij.ImagePlus-">RotatedRectRoi(int, int, ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/RotatedRectRoi.html" title="class in ij.gui">RotatedRectRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#rotateLeft--">rotateLeft()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Rotates the entire image 90 degrees counter-clockwise.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#rotateLeft--">rotateLeft()</a></span> - Method in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Straightener.html#rotateLine-ij.ImagePlus-int-">rotateLine(ImagePlus, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Straightener.html" title="class in ij.plugin">Straightener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#rotateRight--">rotateRight()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Rotates the entire image 90 degrees clockwise.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#rotateRight--">rotateRight()</a></span> - Method in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#rotateYZ">rotateYZ</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Rotate YZ orthogonal views 90 degrees</div>
</dd>
<dt><a href="ij/plugin/filter/Rotator.html" title="class in ij.plugin.filter"><span class="typeNameLink">Rotator</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This plugin implements the Image/Rotate/Arbitrarily command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Rotator.html#Rotator--">Rotator()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Rotator.html" title="class in ij.plugin.filter">Rotator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#ROUND">ROUND</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#ROUNDED_RECT_ARC_SIZE">ROUNDED_RECT_ARC_SIZE</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#ROUNDED_RECT_ROI">ROUNDED_RECT_ROI</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#ROUNDNESS">ROUNDNESS</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#rowIndex-int-">rowIndex(int)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Converts a y coordinate in pixels into a row index.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#ROWS_PER_STRIP">ROWS_PER_STRIP</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#rowsPerStrip">rowsPerStrip</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#rt">rt</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Executer.html#run--">run()</a></span> - Method in class ij.<a href="ij/Executer.html" title="class in ij">Executer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#run--">run()</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#run--">run()</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#run--">run()</a></span> - Method in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#run-java.lang.String-">run(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Runs an ImageJ command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#run-java.lang.String-java.lang.String-">run(String, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Runs an ImageJ command, with options that are passed to the
GenericDialog and OpenDialog classes.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#run-ij.ImagePlus-java.lang.String-java.lang.String-">run(ImagePlus, String, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Runs an ImageJ command using the specified image and options.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#run--">run()</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Quit using a separate thread, hopefully avoiding thread deadlocks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd>
<div class="block">Interprets the specified string.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#run-java.lang.String-java.lang.String-">run(String, String)</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd>
<div class="block">Runs the specified macro, passing it a string
argument and returning a string value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#run-ij.macro.Program-">run(Program)</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd>
<div class="block">Interprets the specified tokenized macro file starting at location 0.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#run-int-">run(int)</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd>
<div class="block">Runs an existing macro starting at the specified program counter location.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#RUN">RUN</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroRunner.html#run-ij.macro.Program-int-java.lang.String-">run(Program, int, String)</a></span> - Method in class ij.macro.<a href="ij/macro/MacroRunner.html" title="class in ij.macro">MacroRunner</a></dt>
<dd>
<div class="block">Runs a tokenized macro on the current thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroRunner.html#run--">run()</a></span> - Method in class ij.macro.<a href="ij/macro/MacroRunner.html" title="class in ij.macro">MacroRunner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AboutBox.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/AboutBox.html" title="class in ij.plugin">AboutBox</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Animator.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Animator.html" title="class in ij.plugin">Animator</a></dt>
<dd>
<div class="block">Set 'arg' to "set" to display a dialog that allows the user to specify the
animation speed.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AppearanceOptions.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/AppearanceOptions.html" title="class in ij.plugin">AppearanceOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ArrowToolOptions.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ArrowToolOptions.html" title="class in ij.plugin">ArrowToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/AVI_Reader.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/AVI_Reader.html" title="class in ij.plugin">AVI_Reader</a></dt>
<dd>
<div class="block">The plugin is invoked by ImageJ using this method.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BatchConverter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/BatchConverter.html" title="class in ij.plugin">BatchConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BatchMeasure.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/BatchMeasure.html" title="class in ij.plugin">BatchMeasure</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BatchProcessor.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/BatchProcessor.html" title="class in ij.plugin">BatchProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BatchProcessor.html#run--">run()</a></span> - Method in class ij.plugin.<a href="ij/plugin/BatchProcessor.html" title="class in ij.plugin">BatchProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Binner.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Binner.html" title="class in ij.plugin">Binner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BMP_Reader.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/BMP_Reader.html" title="class in ij.plugin">BMP_Reader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BMP_Writer.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/BMP_Writer.html" title="class in ij.plugin">BMP_Writer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BrowserLauncher.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/BrowserLauncher.html" title="class in ij.plugin">BrowserLauncher</a></dt>
<dd>
<div class="block">Opens the specified URL (default is the ImageJ home page).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CalibrationBar.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CalibrationBar.html" title="class in ij.plugin">CalibrationBar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CanvasResizer.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CanvasResizer.html" title="class in ij.plugin">CanvasResizer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ChannelArranger.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ChannelArranger.html" title="class in ij.plugin">ChannelArranger</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ChannelArranger.html#run-ij.ImagePlus-int:A-">run(ImagePlus, int[])</a></span> - Static method in class ij.plugin.<a href="ij/plugin/ChannelArranger.html" title="class in ij.plugin">ChannelArranger</a></dt>
<dd>
<div class="block">Changes the order of the channels in a hyperstack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ChannelSplitter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ChannelSplitter.html" title="class in ij.plugin">ChannelSplitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CircularRoiMaker.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CircularRoiMaker.html" title="class in ij.plugin">CircularRoiMaker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ClassChecker.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ClassChecker.html" title="class in ij.plugin">ClassChecker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Clipboard.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Clipboard.html" title="class in ij.plugin">Clipboard</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Colors.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Colors.html" title="class in ij.plugin">Colors</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd>
<div class="block">Displays the Command Finder dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandLister.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandLister.html" title="class in ij.plugin">CommandLister</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Commands.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Commands.html" title="class in ij.plugin">Commands</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Compiler.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Compiler.html" title="class in ij.plugin">Compiler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CompositeConverter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CompositeConverter.html" title="class in ij.plugin">CompositeConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Concatenator.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Concatenator.html" title="class in ij.plugin">Concatenator</a></dt>
<dd>
<div class="block">Optional string argument sets the name dialog boxes if called from another plugin.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Concatenator.html#run--">run()</a></span> - Method in class ij.plugin.<a href="ij/plugin/Concatenator.html" title="class in ij.plugin">Concatenator</a></dt>
<dd>
<div class="block">Displays a dialog requiring user to choose images and
returns ImagePlus of concatenated images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Concatenator.html#run-ij.ImagePlus-ij.ImagePlus-">run(ImagePlus, ImagePlus)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Concatenator.html" title="class in ij.plugin">Concatenator</a></dt>
<dd>
<div class="block">Concatenate two images or stacks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Concatenator.html#run-ij.ImagePlus-ij.ImagePlus-ij.ImagePlus-">run(ImagePlus, ImagePlus, ImagePlus)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Concatenator.html" title="class in ij.plugin">Concatenator</a></dt>
<dd>
<div class="block">Concatenate three images or stacks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Concatenator.html#run-ij.ImagePlus-ij.ImagePlus-ij.ImagePlus-ij.ImagePlus-">run(ImagePlus, ImagePlus, ImagePlus, ImagePlus)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Concatenator.html" title="class in ij.plugin">Concatenator</a></dt>
<dd>
<div class="block">Concatenate four images or stacks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Concatenator.html#run-ij.ImagePlus-ij.ImagePlus-ij.ImagePlus-ij.ImagePlus-ij.ImagePlus-">run(ImagePlus, ImagePlus, ImagePlus, ImagePlus, ImagePlus)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Concatenator.html" title="class in ij.plugin">Concatenator</a></dt>
<dd>
<div class="block">Concatenate five images or stacks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ContrastEnhancer.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ContrastEnhancer.html" title="class in ij.plugin">ContrastEnhancer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ControlPanel.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ControlPanel.html" title="class in ij.plugin">ControlPanel</a></dt>
<dd>
<div class="block">Creates a panel with the hierarchical tree structure of ImageJ's commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Converter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Converter.html" title="class in ij.plugin">Converter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Coordinates.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Coordinates.html" title="class in ij.plugin">Coordinates</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/DICOM.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/DICOM.html" title="class in ij.plugin">DICOM</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Distribution.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Distribution.html" title="class in ij.plugin">Distribution</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/DragAndDrop.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/DragAndDrop.html" title="class in ij.plugin">DragAndDrop</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/DragAndDrop.html#run--">run()</a></span> - Method in class ij.plugin.<a href="ij/plugin/DragAndDrop.html" title="class in ij.plugin">DragAndDrop</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Duplicator.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Duplicator.html" title="class in ij.plugin">Duplicator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Duplicator.html#run-ij.ImagePlus-">run(ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Duplicator.html" title="class in ij.plugin">Duplicator</a></dt>
<dd>
<div class="block">Returns a copy of the image, stack or hyperstack contained in the specified ImagePlus.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Duplicator.html#run-ij.ImagePlus-int-int-">run(ImagePlus, int, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Duplicator.html" title="class in ij.plugin">Duplicator</a></dt>
<dd>
<div class="block">Returns a new stack containing a subrange of the specified stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Duplicator.html#run-ij.ImagePlus-int-int-int-int-int-int-">run(ImagePlus, int, int, int, int, int, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Duplicator.html" title="class in ij.plugin">Duplicator</a></dt>
<dd>
<div class="block">Returns a new hyperstack containing a possibly reduced version of the input image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/EventListener.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/EventListener.html" title="class in ij.plugin">EventListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FFT.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/FFT.html" title="class in ij.plugin">FFT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FFTMath.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/FFTMath.html" title="class in ij.plugin">FFTMath</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FileInfoVirtualStack.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/FileInfoVirtualStack.html" title="class in ij.plugin">FileInfoVirtualStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/AVI_Writer.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/AVI_Writer.html" title="class in ij.plugin.filter">AVI_Writer</a></dt>
<dd>
<div class="block">Asks for the compression type and filename; then saves as AVI file</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/BackgroundSubtracter.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/BackgroundSubtracter.html" title="class in ij.plugin.filter">BackgroundSubtracter</a></dt>
<dd>
<div class="block">Background for any image type</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Benchmark.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Benchmark.html" title="class in ij.plugin.filter">Benchmark</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Binary.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Binary.html" title="class in ij.plugin.filter">Binary</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Calibrator.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Calibrator.html" title="class in ij.plugin.filter">Calibrator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Convolver.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Convolver.html" title="class in ij.plugin.filter">Convolver</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Duplicater.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Duplicater.html" title="class in ij.plugin.filter">Duplicater</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span></div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">Called by the PlugInFilterRunner to process the image or one frame of a stack</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/FFTCustomFilter.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/FFTCustomFilter.html" title="class in ij.plugin.filter">FFTCustomFilter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/FFTFilter.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/FFTFilter.html" title="class in ij.plugin.filter">FFTFilter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Filler.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Filler.html" title="class in ij.plugin.filter">Filler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Filters.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Filters.html" title="class in ij.plugin.filter">Filters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/FractalBoxCounter.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/FractalBoxCounter.html" title="class in ij.plugin.filter">FractalBoxCounter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/GaussianBlur.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/GaussianBlur.html" title="class in ij.plugin.filter">GaussianBlur</a></dt>
<dd>
<div class="block">This method is invoked for each slice during execution</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ImageMath.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ImageMath.html" title="class in ij.plugin.filter">ImageMath</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ImageProperties.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ImageProperties.html" title="class in ij.plugin.filter">ImageProperties</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Info.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Info.html" title="class in ij.plugin.filter">Info</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span></div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/LineGraphAnalyzer.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/LineGraphAnalyzer.html" title="class in ij.plugin.filter">LineGraphAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/LutApplier.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/LutApplier.html" title="class in ij.plugin.filter">LutApplier</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/LutViewer.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/LutViewer.html" title="class in ij.plugin.filter">LutViewer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd>
<div class="block">The plugin is inferred from ImageJ by this method</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Filters use this method to process the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilterRunner.html#run--">run()</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilterRunner.html" title="class in ij.plugin.filter">PlugInFilterRunner</a></dt>
<dd>
<div class="block">The dispatcher for the background threads</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Printer.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Printer.html" title="class in ij.plugin.filter">Printer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RGBStackSplitter.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/RGBStackSplitter.html" title="class in ij.plugin.filter">RGBStackSplitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RoiWriter.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/RoiWriter.html" title="class in ij.plugin.filter">RoiWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Rotator.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Rotator.html" title="class in ij.plugin.filter">Rotator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/SaltAndPepper.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/SaltAndPepper.html" title="class in ij.plugin.filter">SaltAndPepper</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ScaleDialog.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ScaleDialog.html" title="class in ij.plugin.filter">ScaleDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Shadows.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Shadows.html" title="class in ij.plugin.filter">Shadows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/StackLabeler.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/StackLabeler.html" title="class in ij.plugin.filter">StackLabeler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ThresholdToSelection.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ThresholdToSelection.html" title="class in ij.plugin.filter">ThresholdToSelection</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ThresholdToSelection.html#run-ij.ImagePlus-">run(ImagePlus)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/ThresholdToSelection.html" title="class in ij.plugin.filter">ThresholdToSelection</a></dt>
<dd>
<div class="block">Returns a selection created from the thresholded pixels in the
specified image, or null if there are no thresholded pixels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Transformer.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Transformer.html" title="class in ij.plugin.filter">Transformer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Translator.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Translator.html" title="class in ij.plugin.filter">Translator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/UnsharpMask.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/UnsharpMask.html" title="class in ij.plugin.filter">UnsharpMask</a></dt>
<dd>
<div class="block">This method is invoked for each slice or color channel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Writer.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Writer.html" title="class in ij.plugin.filter">Writer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/XYWriter.html#run-ij.process.ImageProcessor-">run(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/XYWriter.html" title="class in ij.plugin.filter">XYWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Filters3D.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Filters3D.html" title="class in ij.plugin">Filters3D</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FITS_Reader.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/FITS_Reader.html" title="class in ij.plugin">FITS_Reader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FITS_Writer.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/FITS_Writer.html" title="class in ij.plugin">FITS_Writer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FolderOpener.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/FolderOpener.html" title="class in ij.plugin">FolderOpener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ColorThresholder.html#run--">run()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ColorThresholder.html" title="class in ij.plugin.frame">ColorThresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ContrastAdjuster.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ContrastAdjuster.html" title="class in ij.plugin.frame">ContrastAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ContrastAdjuster.html#run--">run()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ContrastAdjuster.html" title="class in ij.plugin.frame">ContrastAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#run--">run()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd>
<div class="block">Downloads BeanShell or Jython interpreter using a separate thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/LineWidthAdjuster.html#run--">run()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/LineWidthAdjuster.html" title="class in ij.plugin.frame">LineWidthAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInDialog.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInDialog.html" title="class in ij.plugin.frame">PlugInDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInFrame.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInFrame.html" title="class in ij.plugin.frame">PlugInFrame</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#run--">run()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/GaussianBlur3D.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/GaussianBlur3D.html" title="class in ij.plugin">GaussianBlur3D</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/GelAnalyzer.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/GelAnalyzer.html" title="class in ij.plugin">GelAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/GIF_Reader.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/GIF_Reader.html" title="class in ij.plugin">GIF_Reader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/GifWriter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/GifWriter.html" title="class in ij.plugin">GifWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Grid.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Grid.html" title="class in ij.plugin">Grid</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/GroupedZProjector.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/GroupedZProjector.html" title="class in ij.plugin">GroupedZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Histogram.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Histogram.html" title="class in ij.plugin">Histogram</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Hotkeys.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Hotkeys.html" title="class in ij.plugin">Hotkeys</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackConverter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/HyperStackConverter.html" title="class in ij.plugin">HyperStackConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackMaker.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/HyperStackMaker.html" title="class in ij.plugin">HyperStackMaker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackReducer.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/HyperStackReducer.html" title="class in ij.plugin">HyperStackReducer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ImageCalculator.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ImageCalculator.html" title="class in ij.plugin">ImageCalculator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ImageCalculator.html#run-java.lang.String-ij.ImagePlus-ij.ImagePlus-">run(String, ImagePlus, ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ImageCalculator.html" title="class in ij.plugin">ImageCalculator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ImageInfo.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ImageInfo.html" title="class in ij.plugin">ImageInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ImageJ_Updater.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ImageJ_Updater.html" title="class in ij.plugin">ImageJ_Updater</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ImagesToStack.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ImagesToStack.html" title="class in ij.plugin">ImagesToStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/JavaProperties.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/JavaProperties.html" title="class in ij.plugin">JavaProperties</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/JavaScriptEvaluator.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/JavaScriptEvaluator.html" title="class in ij.plugin">JavaScriptEvaluator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/JavaScriptEvaluator.html#run-java.lang.String-java.lang.String-">run(String, String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/JavaScriptEvaluator.html" title="class in ij.plugin">JavaScriptEvaluator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/JavaScriptEvaluator.html#run--">run()</a></span> - Method in class ij.plugin.<a href="ij/plugin/JavaScriptEvaluator.html" title="class in ij.plugin">JavaScriptEvaluator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/JpegWriter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/JpegWriter.html" title="class in ij.plugin">JpegWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ListVirtualStack.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ListVirtualStack.html" title="class in ij.plugin">ListVirtualStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/LUT_Editor.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/LUT_Editor.html" title="class in ij.plugin">LUT_Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/LutLoader.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/LutLoader.html" title="class in ij.plugin">LutLoader</a></dt>
<dd>
<div class="block">If 'arg'="", displays a file open dialog and opens the specified
LUT.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Macro_Runner.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Macro_Runner.html" title="class in ij.plugin">Macro_Runner</a></dt>
<dd>
<div class="block">Opens and runs the specified macro file (.txt or .ijm) or script file (.js, .bsh or .py)
on the current thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MeasurementsWriter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MeasurementsWriter.html" title="class in ij.plugin">MeasurementsWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Memory.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Memory.html" title="class in ij.plugin">Memory</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MontageMaker.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MontageMaker.html" title="class in ij.plugin">MontageMaker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NewPlugin.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/NewPlugin.html" title="class in ij.plugin">NewPlugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NextImageOpener.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/NextImageOpener.html" title="class in ij.plugin">NextImageOpener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Options.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Options.html" title="class in ij.plugin">Options</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#run--">run()</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/OverlayCommands.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/OverlayCommands.html" title="class in ij.plugin">OverlayCommands</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/OverlayLabels.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/OverlayLabels.html" title="class in ij.plugin">OverlayLabels</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PGM_Reader.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/PGM_Reader.html" title="class in ij.plugin">PGM_Reader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PlugIn.html#run-java.lang.String-">run(String)</a></span> - Method in interface ij.plugin.<a href="ij/plugin/PlugIn.html" title="interface in ij.plugin">PlugIn</a></dt>
<dd>
<div class="block">This method is called when the plugin is loaded.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PluginInstaller.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/PluginInstaller.html" title="class in ij.plugin">PluginInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PlugInInterpreter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/PlugInInterpreter.html" title="class in ij.plugin">PlugInInterpreter</a></dt>
<dd>
<div class="block">Run script on separate thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PlugInInterpreter.html#run-java.lang.String-java.lang.String-">run(String, String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/PlugInInterpreter.html" title="class in ij.plugin">PlugInInterpreter</a></dt>
<dd>
<div class="block">Run script on current thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PNG_Writer.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/PNG_Writer.html" title="class in ij.plugin">PNG_Writer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PNM_Writer.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/PNM_Writer.html" title="class in ij.plugin">PNM_Writer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PointToolOptions.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/PointToolOptions.html" title="class in ij.plugin">PointToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Profiler.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Profiler.html" title="class in ij.plugin">Profiler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Projector.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Projector.html" title="class in ij.plugin">Projector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ProxySettings.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ProxySettings.html" title="class in ij.plugin">ProxySettings</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Raw.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Raw.html" title="class in ij.plugin">Raw</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RectToolOptions.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RectToolOptions.html" title="class in ij.plugin">RectToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Resizer.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Resizer.html" title="class in ij.plugin">Resizer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ResultsSorter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ResultsSorter.html" title="class in ij.plugin">ResultsSorter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RGBStackConverter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RGBStackConverter.html" title="class in ij.plugin">RGBStackConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RGBStackMerge.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RGBStackMerge.html" title="class in ij.plugin">RGBStackMerge</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiEnlarger.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RoiEnlarger.html" title="class in ij.plugin">RoiEnlarger</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiInterpolator.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RoiInterpolator.html" title="class in ij.plugin">RoiInterpolator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiReader.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RoiReader.html" title="class in ij.plugin">RoiReader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiRotator.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RoiRotator.html" title="class in ij.plugin">RoiRotator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiScaler.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RoiScaler.html" title="class in ij.plugin">RoiScaler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ScaleBar.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ScaleBar.html" title="class in ij.plugin">ScaleBar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Scaler.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Scaler.html" title="class in ij.plugin">Scaler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ScreenGrabber.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ScreenGrabber.html" title="class in ij.plugin">ScreenGrabber</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Selection.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Selection.html" title="class in ij.plugin">Selection</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/SimpleCommands.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/SimpleCommands.html" title="class in ij.plugin">SimpleCommands</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Slicer.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Slicer.html" title="class in ij.plugin">Slicer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/SpecifyROI.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/SpecifyROI.html" title="class in ij.plugin">SpecifyROI</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Stack_Statistics.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Stack_Statistics.html" title="class in ij.plugin">Stack_Statistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackCombiner.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackCombiner.html" title="class in ij.plugin">StackCombiner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackEditor.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackEditor.html" title="class in ij.plugin">StackEditor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackInserter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackInserter.html" title="class in ij.plugin">StackInserter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackMaker.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackMaker.html" title="class in ij.plugin">StackMaker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackPlotter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackPlotter.html" title="class in ij.plugin">StackPlotter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackReducer.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackReducer.html" title="class in ij.plugin">StackReducer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackReverser.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackReverser.html" title="class in ij.plugin">StackReverser</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackWriter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackWriter.html" title="class in ij.plugin">StackWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Startup.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Startup.html" title="class in ij.plugin">Startup</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Straightener.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Straightener.html" title="class in ij.plugin">Straightener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/SubHyperstackMaker.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/SubHyperstackMaker.html" title="class in ij.plugin">SubHyperstackMaker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/SubstackMaker.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/SubstackMaker.html" title="class in ij.plugin">SubstackMaker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/SurfacePlotter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/SurfacePlotter.html" title="class in ij.plugin">SurfacePlotter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Text.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Text.html" title="class in ij.plugin">Text</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/TextFileReader.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/TextFileReader.html" title="class in ij.plugin">TextFileReader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/TextReader.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/TextReader.html" title="class in ij.plugin">TextReader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/TextWriter.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/TextWriter.html" title="class in ij.plugin">TextWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ThreadLister.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ThreadLister.html" title="class in ij.plugin">ThreadLister</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Thresholder.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Thresholder.html" title="class in ij.plugin">Thresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Timer.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Timer.html" title="class in ij.plugin">Timer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/BrushTool.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/BrushTool.html" title="class in ij.plugin.tool">BrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/BrushTool.html#run--">run()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/BrushTool.html" title="class in ij.plugin.tool">BrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/OverlayBrushTool.html#run--">run()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/OverlayBrushTool.html" title="class in ij.plugin.tool">OverlayBrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PlugInTool.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool">PlugInTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/URLOpener.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/URLOpener.html" title="class in ij.plugin">URLOpener</a></dt>
<dd>
<div class="block">If 'urlOrName' is a URL, opens the image at that URL.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/WandToolOptions.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/WandToolOptions.html" title="class in ij.plugin">WandToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/WindowOrganizer.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/WindowOrganizer.html" title="class in ij.plugin">WindowOrganizer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/XY_Reader.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/XY_Reader.html" title="class in ij.plugin">XY_Reader</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/XYCoordinates.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/XYCoordinates.html" title="class in ij.plugin">XYCoordinates</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZAxisProfiler.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ZAxisProfiler.html" title="class in ij.plugin">ZAxisProfiler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Zoom.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Zoom.html" title="class in ij.plugin">Zoom</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#run-ij.ImagePlus-java.lang.String-">run(ImagePlus, String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd>
<div class="block">Performs projection on the entire stack using the specified method and returns
the result, where 'method' is "avg", "min", "max", "sum", "sd" or "median".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#run-ij.ImagePlus-java.lang.String-int-int-">run(ImagePlus, String, int, int)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd>
<div class="block">Performs projection using the specified method and stack range, and returns
the result, where 'method' is "avg", "min", "max", "sum", "sd" or "median".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#run-java.lang.String-">run(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/BinaryInterpolator.html#run-ij.ImagePlus-ij.gui.Roi:A-">run(ImagePlus, Roi[])</a></span> - Method in class ij.process.<a href="ij/process/BinaryInterpolator.html" title="class in ij.process">BinaryInterpolator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/BinaryInterpolator.html#run-ij.ImageStack-">run(ImageStack)</a></span> - Method in class ij.process.<a href="ij/process/BinaryInterpolator.html" title="class in ij.process">BinaryInterpolator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/RecentOpener.html#run--">run()</a></span> - Method in class ij.<a href="ij/RecentOpener.html" title="class in ij">RecentOpener</a></dt>
<dd>
<div class="block">Open the file and move the path to top of the submenu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#run--">run()</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">For better performance, open double-clicked files on
separate thread instead of on event dispatch thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#RUN_MACRO">RUN_MACRO</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Debugger.html#RUN_TO_CARET">RUN_TO_CARET</a></span> - Static variable in interface ij.macro.<a href="ij/macro/Debugger.html" title="interface in ij.macro">Debugger</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Debugger.html#RUN_TO_COMPLETION">RUN_TO_COMPLETION</a></span> - Static variable in interface ij.macro.<a href="ij/macro/Debugger.html" title="interface in ij.macro">Debugger</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#runBatchMacro-java.lang.String-ij.ImagePlus-">runBatchMacro(String, ImagePlus)</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd>
<div class="block">Runs Process/Batch/ macros.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Macro_Runner.html#runBeanShell-java.lang.String-java.lang.String-">runBeanShell(String, String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Macro_Runner.html" title="class in ij.plugin">Macro_Runner</a></dt>
<dd>
<div class="block">Runs a BeanShell script on the current thread, passing a string argument,
which the script can retrieve using the getArgument() function.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#runCommand-java.lang.String-">runCommand(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#runCommand-java.lang.String-">runCommand(String)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Executes the ROI Manager "Add", "Add & Draw", "Update", "Delete", "Measure", "Draw",
"Show All", "Show None", "Fill", "Deselect", "Select All", "Combine", "AND", "XOR", "Split",
"Sort" or "Multi Measure" command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#runCommand-ij.ImagePlus-java.lang.String-">runCommand(ImagePlus, String)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Using the specified image, runs the ROI Manager "Add", "Add & Draw", "Update",
"Delete", "Measure", "Draw", "Show All", "Show None", "Fill", "Deselect", "Select All",
"Combine", "AND", "XOR", "Split", "Sort" or "Multi Measure" command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#runCommand-java.lang.String-java.lang.String-">runCommand(String, String)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Executes the ROI Manager "Open", "Save" or "Rename" command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#runCommand-java.lang.String-java.lang.String-double-">runCommand(String, String, double)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Adds the current selection to the ROI Manager, using the
specified color (a 6 digit hex string) and line width.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#runFilterPlugIn-java.lang.Object-java.lang.String-java.lang.String-">runFilterPlugIn(Object, String, String)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#runFromLabel-java.lang.String-">runFromLabel(String)</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Macro_Runner.html#runJavaScript-java.lang.String-java.lang.String-">runJavaScript(String, String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Macro_Runner.html" title="class in ij.plugin">Macro_Runner</a></dt>
<dd>
<div class="block">Runs a JavaScript script on the current thread, passing a string argument,
which the script can retrieve using the getArgument() function.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#runMacro-java.lang.String-">runMacro(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Runs the macro contained in the string <code>macro</code>.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#runMacro-java.lang.String-java.lang.String-">runMacro(String, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Runs the macro contained in the string <code>macro</code>.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#runMacro-ij.macro.Program-int-java.lang.String-">runMacro(Program, int, String)</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd>
<div class="block">Interprets the specified tokenized macro starting at the specified location.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Macro_Runner.html#runMacro-java.lang.String-java.lang.String-">runMacro(String, String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Macro_Runner.html" title="class in ij.plugin">Macro_Runner</a></dt>
<dd>
<div class="block">Runs the specified macro on the current thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#runMacro-java.lang.String-">runMacro(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#runMacro-java.lang.String-ij.plugin.frame.Editor-">runMacro(String, Editor)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#runMacroCommand-java.lang.String-">runMacroCommand(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd>
<div class="block">Runs a command in the Plugins/Macros submenu on the current thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#runMacroFile-java.lang.String-java.lang.String-">runMacroFile(String, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Runs the specified macro or script file in the current thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#runMacroFile-java.lang.String-">runMacroFile(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Runs the specified macro file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Macro_Runner.html#runMacroFile-java.lang.String-java.lang.String-">runMacroFile(String, String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Macro_Runner.html" title="class in ij.plugin">Macro_Runner</a></dt>
<dd>
<div class="block">Opens and runs the specified macro or script on the current
thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Macro_Runner.html#runMacroFromIJJar-java.lang.String-java.lang.String-">runMacroFromIJJar(String, String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Macro_Runner.html" title="class in ij.plugin">Macro_Runner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Macro_Runner.html#runMacroFromJar-java.lang.String-java.lang.String-">runMacroFromJar(String, String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Macro_Runner.html" title="class in ij.plugin">Macro_Runner</a></dt>
<dd>
<div class="block">Runs the specified macro from a JAR file in the plugins folder,
passing it the specified argument.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#runMacroShortcut-java.lang.String-">runMacroShortcut(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#runMacroTool-java.lang.String-">runMacroTool(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/MacroToolRunner.html#runMacroTool-java.lang.String-">runMacroTool(String)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/MacroToolRunner.html" title="class in ij.plugin.tool">MacroToolRunner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PlugInTool.html#runMacroTool-java.lang.String-">runMacroTool(String)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool">PlugInTool</a></dt>
<dd>
<div class="block">These methods are overridden by MacroToolRunner.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#runMenuTool-java.lang.String-java.lang.String-">runMenuTool(String, String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/MacroToolRunner.html#runMenuTool-java.lang.String-java.lang.String-">runMenuTool(String, String)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/MacroToolRunner.html" title="class in ij.plugin.tool">MacroToolRunner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PlugInTool.html#runMenuTool-java.lang.String-java.lang.String-">runMenuTool(String, String)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool">PlugInTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#running">running</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd>
<div class="block">This variable is set false if the user presses the escape key or closes the window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#running2">running2</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd>
<div class="block">This variable is set false if the user clicks in this
window, presses the escape key, or closes the window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#runPlugIn-ij.ImagePlus-java.lang.String-java.lang.String-">runPlugIn(ImagePlus, String, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Runs the specified plugin using the specified image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#runPlugIn-java.lang.String-java.lang.String-">runPlugIn(String, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Runs the specified plugin and returns a reference to it.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#runPlugIn-java.lang.String-java.lang.String-java.lang.String-">runPlugIn(String, String, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Runs the specified plugin and returns a reference to it.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Macro_Runner.html#runPython-java.lang.String-java.lang.String-">runPython(String, String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Macro_Runner.html" title="class in ij.plugin">Macro_Runner</a></dt>
<dd>
<div class="block">Runs a Python script on the current thread, passing a string argument,
which the script can retrieve using the getArgument() function.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroRunner.html#runShortcut-ij.macro.Program-int-java.lang.String-">runShortcut(Program, int, String)</a></span> - Method in class ij.macro.<a href="ij/macro/MacroRunner.html" title="class in ij.macro">MacroRunner</a></dt>
<dd>
<div class="block">Runs tokenized macro on current thread if pgm.queueCommands is true.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#runSocketListener">runSocketListener</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Run the SocketListener.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#runUserPlugIn-java.lang.String-java.lang.String-java.lang.String-boolean-">runUserPlugIn(String, String, String, boolean)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#rw">rw</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#rx">rx</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#ry">ry</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
</dl>
<a name="I:S">
<!-- -->
</a>
<h2 class="title">S</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/plugin/ControlPanel.html#s2ints-java.lang.String-">s2ints(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ControlPanel.html" title="class in ij.plugin">ControlPanel</a></dt>
<dd>
<div class="block">Breaks the specified string into an array
of ints.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/FractalBoxCounter.html#s2ints-java.lang.String-">s2ints(String)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/FractalBoxCounter.html" title="class in ij.plugin.filter">FractalBoxCounter</a></dt>
<dd>
<div class="block">Breaks the specified string into an array
of ints.</div>
</dd>
<dt><a href="ij/plugin/filter/SaltAndPepper.html" title="class in ij.plugin.filter"><span class="typeNameLink">SaltAndPepper</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">Implements ImageJ's Process/Noise/Salt and Pepper command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/SaltAndPepper.html#SaltAndPepper--">SaltAndPepper()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/SaltAndPepper.html" title="class in ij.plugin.filter">SaltAndPepper</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#SAMPLE_FORMAT">SAMPLE_FORMAT</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#sampleModel">sampleModel</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#SAMPLES_PER_PIXEL">SAMPLES_PER_PIXEL</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#samplesPerPixel">samplesPerPixel</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#SansSerif12">SansSerif12</a></span> - Static variable in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">SansSerif, 12-point, plain font.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#save">save</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#save-java.lang.String-">save(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Saves the current image, lookup table, selection or text window to the specified file path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#save-ij.ImagePlus-java.lang.String-">save(ImagePlus, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Saves the specified image, lookup table or selection to the specified file path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#save--">save()</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Resaves the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiEncoder.html#save-ij.gui.Roi-java.lang.String-">save(Roi, String)</a></span> - Static method in class ij.io.<a href="ij/io/RoiEncoder.html" title="class in ij.io">RoiEncoder</a></dt>
<dd>
<div class="block">Saves the specified ROI as a file, returning 'true' if successful.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SAVE">SAVE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#save-java.lang.String-">save(String)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Saves this ResultsTable as a tab or comma delimited text file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/JpegWriter.html#save-ij.ImagePlus-java.lang.String-int-">save(ImagePlus, String, int)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/JpegWriter.html" title="class in ij.plugin">JpegWriter</a></dt>
<dd>
<div class="block">Thread-safe method.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MeasurementsWriter.html#save-java.lang.String-">save(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MeasurementsWriter.html" title="class in ij.plugin">MeasurementsWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#save-java.io.PrintWriter-">save(PrintWriter)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Writes all the text in this TextPanel to a file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SAVE_AS">SAVE_AS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#SAVE_AS_MENU">SAVE_AS_MENU</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SAVE_SETTINGS">SAVE_SETTINGS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#saveAs-java.lang.String-java.lang.String-">saveAs(String, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#saveAs-ij.ImagePlus-java.lang.String-java.lang.String-">saveAs(ImagePlus, String, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Macro.html#saveAs-java.lang.String-">saveAs(String)</a></span> - Static method in class ij.<a href="ij/Macro.html" title="class in ij">Macro</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#saveAs-java.lang.String-">saveAs(String)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#saveAs--">saveAs()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#saveAs-java.lang.String-">saveAs(String)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Saves all the text in this TextPanel to a file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsBmp--">saveAsBmp()</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the image in BMP format using a save file dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsBmp-java.lang.String-">saveAsBmp(String)</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the image in BMP format using the specified path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiEncoder.html#saveAsByteArray-ij.gui.Roi-">saveAsByteArray(Roi)</a></span> - Static method in class ij.io.<a href="ij/io/RoiEncoder.html" title="class in ij.io">RoiEncoder</a></dt>
<dd>
<div class="block">Saves the specified ROI as a byte array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsFits--">saveAsFits()</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the image in FITS format using a save file dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsFits-java.lang.String-">saveAsFits(String)</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the image in FITS format using the specified path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsGif--">saveAsGif()</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the image in GIF format using a save file
dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsGif-java.lang.String-">saveAsGif(String)</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the image in Gif format using the specified path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsJpeg--">saveAsJpeg()</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the image in JPEG format using a save file
dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsJpeg-java.lang.String-">saveAsJpeg(String)</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the image in JPEG format using the specified path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsLut--">saveAsLut()</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the current LUT using a save file
dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsLut-java.lang.String-">saveAsLut(String)</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the current LUT using the specified path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsPgm--">saveAsPgm()</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Saves grayscale images in PGM (portable graymap) format
and RGB images in PPM (portable pixmap) format,
using a save file dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsPgm-java.lang.String-">saveAsPgm(String)</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Saves grayscale images in PGM (portable graymap) format
and RGB images in PPM (portable pixmap) format,
using the specified path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsPng--">saveAsPng()</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the image in PNG format using a save file dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsPng-java.lang.String-">saveAsPng(String)</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the image in PNG format using the specified path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsRaw--">saveAsRaw()</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the image or stack as raw data using a save file
dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsRaw-java.lang.String-">saveAsRaw(String)</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the image as raw data using the specified path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsRawStack-java.lang.String-">saveAsRawStack(String)</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the stack as raw data using the specified path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsText--">saveAsText()</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the image as tab-delimited text using a save file
dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsText-java.lang.String-">saveAsText(String)</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the image as tab-delimited text using the specified path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#saveAsTiff-ij.ImagePlus-java.lang.String-">saveAsTiff(ImagePlus, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Saves the specified image in TIFF format.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsTiff--">saveAsTiff()</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Saves the image or stack in TIFF format using a save file
dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsTiff-java.lang.String-">saveAsTiff(String)</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Saves the image in TIFF format using the specified path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsTiffStack-java.lang.String-">saveAsTiffStack(String)</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Saves the stack as a multi-image TIFF using the specified path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsZip--">saveAsZip()</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Uses a save file dialog to save the image or stack as a TIFF
in a ZIP archive.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveAsZip-java.lang.String-">saveAsZip(String)</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Save the image or stack in TIFF/ZIP format using the specified path.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BMP_Writer.html#saveBitmap-java.lang.String-java.awt.Image-int-int-">saveBitmap(String, Image, int, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/BMP_Writer.html" title="class in ij.plugin">BMP_Writer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#saveChanges-int-">saveChanges(int)</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Currently not implemented</div>
</dd>
<dt><a href="ij/gui/SaveChangesDialog.html" title="class in ij.gui"><span class="typeNameLink">SaveChangesDialog</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">A modal dialog box with a one line message and
"Don't Save", "Cancel" and "Save" buttons.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/SaveChangesDialog.html#SaveChangesDialog-java.awt.Frame-java.lang.String-">SaveChangesDialog(Frame, String)</a></span> - Constructor for class ij.gui.<a href="ij/gui/SaveChangesDialog.html" title="class in ij.gui">SaveChangesDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#saveCommand--">saveCommand()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd>
<div class="block">Writes the current command and options to the Recorder window.</div>
</dd>
<dt><a href="ij/io/SaveDialog.html" title="class in ij.io"><span class="typeNameLink">SaveDialog</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">This class displays a dialog window from
which the user can save a file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/SaveDialog.html#SaveDialog-java.lang.String-java.lang.String-java.lang.String-">SaveDialog(String, String, String)</a></span> - Constructor for class ij.io.<a href="ij/io/SaveDialog.html" title="class in ij.io">SaveDialog</a></dt>
<dd>
<div class="block">Displays a file save dialog with 'title' as the
title, 'defaultName' as the initial file name, and
'extension' (e.g.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/SaveDialog.html#SaveDialog-java.lang.String-java.lang.String-java.lang.String-java.lang.String-">SaveDialog(String, String, String, String)</a></span> - Constructor for class ij.io.<a href="ij/io/SaveDialog.html" title="class in ij.io">SaveDialog</a></dt>
<dd>
<div class="block">Displays a file save dialog, using the specified
default directory and file name and extension.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#saveDisplayRangesAndLuts-ij.ImagePlus-ij.io.FileInfo-">saveDisplayRangesAndLuts(ImagePlus, FileInfo)</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#saveGlobals-ij.macro.Program-">saveGlobals(Program)</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd>
<div class="block">Saves global variables.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#saveImageDescription-byte:A-ij.io.FileInfo-">saveImageDescription(byte[], FileInfo)</a></span> - Method in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd>
<div class="block">Save the image description in the specified FileInfo.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#saveLocation-java.lang.String-java.awt.Point-">saveLocation(String, Point)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Saves the Point <code>loc</code> in the preferences
file as a string using the keyword <code>key</code>.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#saveMetadata-java.lang.String-java.lang.String-">saveMetadata(String, String)</a></span> - Method in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/BatchProcessor.html#saveOutput-boolean-">saveOutput(boolean)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/BatchProcessor.html" title="class in ij.plugin">BatchProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/NewImage.html#savePreferences-java.util.Properties-">savePreferences(Properties)</a></span> - Static method in class ij.gui.<a href="ij/gui/NewImage.html" title="class in ij.gui">NewImage</a></dt>
<dd>
<div class="block">Called when ImageJ quits.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#savePreferences-java.util.Properties-">savePreferences(Properties)</a></span> - Static method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Called once when ImageJ quits.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#savePreferences-java.util.Properties-">savePreferences(Properties)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Called once when ImageJ quits.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/ImportDialog.html#savePreferences-java.util.Properties-">savePreferences(Properties)</a></span> - Static method in class ij.io.<a href="ij/io/ImportDialog.html" title="class in ij.io">ImportDialog</a></dt>
<dd>
<div class="block">Called once when ImageJ quits.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#savePreferences-java.util.Properties-">savePreferences(Properties)</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Called once when ImageJ quits.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#savePreferences-java.util.Properties-">savePreferences(Properties)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Called once when ImageJ quits.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#savePreferences-java.util.Properties-">savePreferences(Properties)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Called once when ImageJ quits.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#savePreferences--">savePreferences()</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Saves user preferences in the IJ_Prefs.txt properties file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#savePrefs-java.util.Properties-java.lang.String-">savePrefs(Properties, String)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/SaveChangesDialog.html#savePressed--">savePressed()</a></span> - Method in class ij.gui.<a href="ij/gui/SaveChangesDialog.html" title="class in ij.gui">SaveChangesDialog</a></dt>
<dd>
<div class="block">Returns true if the user dismissed dialog by pressing "Save".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#saveResults-ij.process.ImageStatistics-ij.gui.Roi-">saveResults(ImageStatistics, Roi)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Saves the measurements specified in the "Set Measurements" dialog,
or by calling setMeasurements(), in the default results table.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#saveResults-ij.process.ImageStatistics-ij.gui.Roi-">saveResults(ImageStatistics, Roi)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Saves statistics for one particle in a results table.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#saveRoi--">saveRoi()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RoiWriter.html#saveRoi-ij.ImagePlus-">saveRoi(ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/RoiWriter.html" title="class in ij.plugin.filter">RoiWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#saveString-java.lang.String-java.lang.String-">saveString(String, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Saves a string as a file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#saveThreshold-double-double-ij.measure.Calibration-">saveThreshold(double, double, Calibration)</a></span> - Method in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#saveXValues">saveXValues</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Write first X column when listing or saving.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/XYWriter.html#saveXYCoordinates-ij.ImagePlus-">saveXYCoordinates(ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/XYWriter.html" title="class in ij.plugin.filter">XYWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiScaler.html#scale-ij.gui.Roi-double-double-boolean-">scale(Roi, double, double, boolean)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/RoiScaler.html" title="class in ij.plugin">RoiScaler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#scale-double-double-">scale(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Scales the image or selection using the specified scale factors.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#scale-double-double-">scale(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Scales the image or selection using the specified scale factors.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#scale-double-double-">scale(double, double)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Scales the image or selection using the specified scale factors.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#scale-double-double-">scale(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Scales the image by the specified factors.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#scale-double-double-">scale(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Scales the image or selection using the specified scale factors.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#scale-double-double-">scale(double, double)</a></span> - Method in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#scale-double-double-double-">scale(double, double, double)</a></span> - Method in class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Resizer.html#SCALE_T">SCALE_T</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Resizer.html" title="class in ij.plugin">Resizer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#scaleAndSetThreshold-double-double-int-">scaleAndSetThreshold(double, double, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Set the threshold using a 0-255 range.</div>
</dd>
<dt><a href="ij/plugin/ScaleBar.html" title="class in ij.plugin"><span class="typeNameLink">ScaleBar</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Analyze/Tools/Draw Scale Bar command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ScaleBar.html#ScaleBar--">ScaleBar()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ScaleBar.html" title="class in ij.plugin">ScaleBar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#scaled--">scaled()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Returns true if this image is spatially calibrated.</div>
</dd>
<dt><a href="ij/plugin/filter/ScaleDialog.html" title="class in ij.plugin.filter"><span class="typeNameLink">ScaleDialog</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">Implements the Analyze/Set Scale command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ScaleDialog.html#ScaleDialog--">ScaleDialog()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/ScaleDialog.html" title="class in ij.plugin.filter">ScaleDialog</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Scaler.html" title="class in ij.plugin"><span class="typeNameLink">Scaler</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Image/Scale command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Scaler.html#Scaler--">Scaler()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Scaler.html" title="class in ij.plugin">Scaler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#scaleXtoPxl-double-">scaleXtoPxl(double)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Converts calibrated coordinates to pixel coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#scaleYtoPxl-double-">scaleYtoPxl(double)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Converts calibrated coordinates to pixel coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#SCIENTIFIC_NOTATION">SCIENTIFIC_NOTATION</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SCREEN_HEIGHT">SCREEN_HEIGHT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SCREEN_WIDTH">SCREEN_WIDTH</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/ScreenGrabber.html" title="class in ij.plugin"><span class="typeNameLink">ScreenGrabber</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Plugins/Utilities/Capture Screen
and Plugins/Utilities/Capture Image commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ScreenGrabber.html#ScreenGrabber--">ScreenGrabber()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ScreenGrabber.html" title="class in ij.plugin">ScreenGrabber</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#screenX-int-">screenX(int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Converts an offscreen x-coordinate to a screen x-coordinate.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#screenX-int-">screenX(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#screenXD-double-">screenXD(double)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Converts a floating-point offscreen x-coordinate to a screen x-coordinate.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#screenXD-double-">screenXD(double)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#screenY-int-">screenY(int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Converts an offscreen y-coordinate to a screen y-coordinate.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#screenY-int-">screenY(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#screenYD-double-">screenYD(double)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Converts a floating-point offscreen x-coordinate to a screen x-coordinate.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#screenYD-double-">screenYD(double)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#scriptMode--">scriptMode()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#scroll-int-int-">scroll(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#scroll-int-int-">scroll(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">overrides ImageCanvas.scroll; if plot is not frozen, scrolling modifies the plot data range</div>
</dd>
<dt><a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui"><span class="typeNameLink">ScrollbarWithLabel</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This class, based on Joachim Walter's Image5D package, adds "c", "z" labels
and play-pause icons (T) to the stack and hyperstacks dimension sliders.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#ScrollbarWithLabel--">ScrollbarWithLabel()</a></span> - Constructor for class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#ScrollbarWithLabel-ij.gui.StackWindow-int-int-int-int-char-">ScrollbarWithLabel(StackWindow, int, int, int, int, char)</a></span> - Constructor for class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#scrollToTop--">scrollToTop()</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#SD_METHOD">SD_METHOD</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RandomAccessStream.html#seek-long-">seek(long)</a></span> - Method in class ij.io.<a href="ij/io/RandomAccessStream.html" title="class in ij.io">RandomAccessStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RandomAccessStream.html#seek-int-">seek(int)</a></span> - Method in class ij.io.<a href="ij/io/RandomAccessStream.html" title="class in ij.io">RandomAccessStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#SEGMENTED">SEGMENTED</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd>
<div class="block">Output type watershed-segmented image</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SELECT">SELECT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#select-int-">select(int)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Assigns the ROI at the specified index to the current image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#select-ij.ImagePlus-int-">select(ImagePlus, int)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Assigns the ROI at the specified index to 'imp'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#select-int-boolean-boolean-">select(int, boolean, boolean)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SELECT_IMAGE">SELECT_IMAGE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#selectAll--">selectAll()</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Selects all the lines in this TextPanel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#selectAndMakeVisible-ij.ImagePlus-int-">selectAndMakeVisible(ImagePlus, int)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Selection.html" title="class in ij.plugin"><span class="typeNameLink">Selection</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the commands in the Edit/Selection submenu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Selection.html#Selection--">Selection()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Selection.html" title="class in ij.plugin">Selection</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SELECTION_CONTAINS">SELECTION_CONTAINS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SELECTION_NAME">SELECTION_NAME</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SELECTION_TYPE">SELECTION_TYPE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#selectWindow-int-">selectWindow(int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">For IDs less than zero, activates the image with the specified ID.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#selectWindow-java.lang.String-">selectWindow(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Activates the window with the specified title.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/OtherInstance.html#sendArguments-java.lang.String:A-">sendArguments(String[])</a></span> - Static method in class ij.<a href="ij/OtherInstance.html" title="class in ij">OtherInstance</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#separator">separator</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">file.separator system property</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#serialize--">serialize()</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Converts this image to a TIFF encoded array of bytes,
which can be decoded using Opener.deserialize().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#set-java.lang.String-java.lang.String-">set(String, String)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Saves the value of the string <code>text</code> in the preferences
file using the keyword <code>key</code>.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#set-java.lang.String-int-">set(String, int)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Saves <code>value</code> in the preferences file using
the keyword <code>key</code>.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#set-java.lang.String-double-">set(String, double)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Saves <code>value</code> in the preferences file using
the keyword <code>key</code>.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#set-java.lang.String-boolean-">set(String, boolean)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Saves the boolean variable <code>value</code> in the preferences
file using the keyword <code>key</code>.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#set-int-int-int-">set(int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#set-int-int-">set(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#set-int-int-int-">set(int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#set-int-int-">set(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#set-int-int-int-">set(int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#set-int-int-">set(int, int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#set-double-">set(double)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#set-int-int-int-">set(int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">This is a faster version of putPixel() that does not clip
out of range values and does not do bounds checking.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#set-int-int-">set(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#set-double-">set(double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Assigns 'value' to each pixel in the image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#set-int-int-int-">set(int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#set-int-int-">set(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#set-double-">set(double)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ContrastAdjuster.html#set16bitRange-int-">set16bitRange(int)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/ContrastAdjuster.html" title="class in ij.plugin.frame">ContrastAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_AUTO_THRESHOLD">SET_AUTO_THRESHOLD</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_BACKGROUND">SET_BACKGROUND</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_BATCH_MODE">SET_BATCH_MODE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_COLOR">SET_COLOR</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_FONT">SET_FONT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_FOREGROUND">SET_FOREGROUND</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_JUSTIFICATION">SET_JUSTIFICATION</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_KEY_DOWN">SET_KEY_DOWN</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_LINE_WIDTH">SET_LINE_WIDTH</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_LOCATION">SET_LOCATION</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_LUT">SET_LUT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_METADATA">SET_METADATA</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_MIN_MAX">SET_MIN_MAX</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_OPTION">SET_OPTION</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_PASTE_MODE">SET_PASTE_MODE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_PIXEL">SET_PIXEL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotDialog.html#SET_RANGE">SET_RANGE</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotDialog.html" title="class in ij.gui">PlotDialog</a></dt>
<dd>
<div class="block">types of dialog</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_RESULT">SET_RESULT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_RGB_WEIGHTS">SET_RGB_WEIGHTS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_SELECTION_LOC">SET_SELECTION_LOC</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_SELECTION_NAME">SET_SELECTION_NAME</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_SLICE">SET_SLICE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_THRESHOLD">SET_THRESHOLD</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_TOOL">SET_TOOL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_VOXEL_SIZE">SET_VOXEL_SIZE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SET_Z_COORDINATE">SET_Z_COORDINATE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setActivated--">setActivated()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Called by ImageWindow.windowActivated().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setActiveChannels-java.lang.String-">setActiveChannels(String)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Controls which channels in a composite color image are displayed,
where 'channels' is a list of ones and zeros that specify the channels to
display.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#setAdditionalFunctions-java.lang.String-">setAdditionalFunctions(String)</a></span> - Static method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd>
<div class="block">The specified string, if not null, is added to strings passed to the run() method.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Wand.html#setAllPoints-boolean-">setAllPoints(boolean)</a></span> - Static method in class ij.gui.<a href="ij/gui/Wand.html" title="class in ij.gui">Wand</a></dt>
<dd>
<div class="block">Set 'true' and output will contain intermediate points for straight lines longer than one pixel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageRoi.html#setAngle-double-">setAngle(double)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageRoi.html" title="class in ij.gui">ImageRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#setAngle-double-">setAngle(double)</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#setAnimate-boolean-">setAnimate(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#setAntialiased-boolean-">setAntialiased(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Sets the 'antialiased' instance variable.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/Java2.html#setAntialiased-java.awt.Graphics-boolean-">setAntialiased(Graphics, boolean)</a></span> - Static method in class ij.util.<a href="ij/util/Java2.html" title="class in ij.util">Java2</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setAntialiasedText-boolean-">setAntialiasedText(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Determines whether to use antialiased text (default true)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#setAntialiasedText-boolean-">setAntialiasedText(boolean)</a></span> - Static method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Sets the state of the global 'antialiasedText' variable.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setAntialiasedText-boolean-">setAntialiasedText(boolean)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Specifies whether or not text is drawn using antialiasing.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/Java2.html#setAntialiasedText-java.awt.Graphics-boolean-">setAntialiasedText(Graphics, boolean)</a></span> - Static method in class ij.util.<a href="ij/util/Java2.html" title="class in ij.util">Java2</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setAntialiasRendering-boolean-">setAntialiasRendering(boolean)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Enable/disable use of antialiasing by the flatten() method.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setAutoThreshold-ij.ImagePlus-java.lang.String-">setAutoThreshold(ImagePlus, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setAutoThreshold-java.lang.String-">setAutoThreshold(String)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setAutoThreshold-java.lang.String-boolean-int-">setAutoThreshold(String, boolean, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setAutoThreshold-ij.process.AutoThresholder.Method-boolean-">setAutoThreshold(AutoThresholder.Method, boolean)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setAutoThreshold-ij.process.AutoThresholder.Method-boolean-int-">setAutoThreshold(AutoThresholder.Method, boolean, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setAutoThreshold-int-int-">setAutoThreshold(int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Automatically sets the lower and upper threshold levels, where 'method'
must be ISODATA or ISODATA2 and 'lutUpdate' must be RED_LUT,
BLACK_AND_WHITE_LUT, OVER_UNDER_LUT or NO_LUT_UPDATE.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Resizer.html#setAverageWhenDownsizing-boolean-">setAverageWhenDownsizing(boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Resizer.html" title="class in ij.plugin">Resizer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setAxes-boolean-boolean-boolean-boolean-boolean-boolean-int-int-">setAxes(boolean, boolean, boolean, boolean, boolean, boolean, int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the properties of the axes.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setAxisLabelFont-int-float-">setAxisLabelFont(int, float)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the size of the x and y label font size and style.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setAxisXLog-boolean-">setAxisXLog(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the X Axis format to Log or Linear.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setAxisYLog-boolean-">setAxisYLog(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the Y Axis format to Log or Linear.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Thresholder.html#setBackground-java.lang.String-">setBackground(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Thresholder.html" title="class in ij.plugin">Thresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setBackgroundColor-java.awt.Color-">setBackgroundColor(Color)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Set the plot frame background color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setBackgroundColor-java.lang.String-">setBackgroundColor(String)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Set the plot frame background color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#setBackgroundColor-java.awt.Color-">setBackgroundColor(Color)</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setBackgroundColor-int-int-int-">setBackgroundColor(int, int, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Sets the background color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#setBackgroundColor-java.awt.Color-">setBackgroundColor(Color)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#setBackgroundValue-double-">setBackgroundValue(double)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Sets the background fill value, where 0<=value<=255.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setBackgroundValue-double-">setBackgroundValue(double)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Sets the background fill value, where <code>value</code> is interpreted as an RGB int.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#setBackgroundValue-double-">setBackgroundValue(double)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Does nothing.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setBackgroundValue-double-">setBackgroundValue(double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets the background fill value used by the rotate() and scale() methods.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#setBackgroundValue-double-">setBackgroundValue(double)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Does nothing.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProgressBar.html#setBatchMode-boolean-">setBatchMode(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/ProgressBar.html" title="class in ij.gui">ProgressBar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/Java2.html#setBilinearInterpolation-java.awt.Graphics-boolean-">setBilinearInterpolation(Graphics, boolean)</a></span> - Static method in class ij.util.<a href="ij/util/Java2.html" title="class in ij.util">Java2</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setBinaryThreshold--">setBinaryThreshold()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#setBitDepth-int-">setBitDepth(int)</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Sets the bit depth (8, 16, 24 or 32).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#setBlackBackground--">setBlackBackground()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#setBlockIncrement-int-">setBlockIncrement(int)</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setBrightness-ij.process.FloatProcessor-">setBrightness(FloatProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Updates the brightness using the pixels in the specified FloatProcessor).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#setBrushSize-int-">setBrushSize(int)</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Set the size of the selection brush tool, in pixels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/BrushTool.html#setBrushWidth-int-">setBrushWidth(int)</a></span> - Static method in class ij.plugin.tool.<a href="ij/plugin/tool/BrushTool.html" title="class in ij.plugin.tool">BrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setC-int-">setC(int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Sets the hyperstack channel position (one based).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#setC-ij.gui.ImageWindow-int-">setC(ImageWindow, int)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setCalibration-ij.measure.Calibration-">setCalibration(Calibration)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Sets this image's calibration.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setCalibrationTable-float:A-">setCalibrationTable(float[])</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Set a lookup table used by getPixelValue(), getLine() and
convertToFloat() to calibrate pixel values.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#setCancelLabel-java.lang.String-">setCancelLabel(String)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Sets a replacement label for the "Cancel" button.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/WildcardMatch.html#setCaseSensitive-boolean-">setCaseSensitive(boolean)</a></span> - Method in class ij.util.<a href="ij/util/WildcardMatch.html" title="class in ij.util">WildcardMatch</a></dt>
<dd>
<div class="block">Makes pattern matching case insensitive.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setChannel-int-ij.process.ByteProcessor-">setChannel(int, ByteProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Sets the pixels of one color channel from a ByteProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#setChannelColorModel-java.awt.image.IndexColorModel-">setChannelColorModel(IndexColorModel)</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#setChannelLut-ij.process.LUT-">setChannelLut(LUT)</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#setChannelLut-ij.process.LUT-int-">setChannelLut(LUT, int)</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#setChannelsUpdated--">setChannelsUpdated()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd>
<div class="block">Deprecated</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setClipRect-java.awt.Rectangle-">setClipRect(Rectangle)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Updates the clipping rectangle used by lineTo(), drawLine(), drawDot() and drawPixel().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setColor-java.awt.Color-">setColor(Color)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Changes the drawing color for the next objects that will be added to the plot.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setColor-java.lang.String-">setColor(String)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setColor-java.awt.Color-java.awt.Color-">setColor(Color, Color)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Changes the drawing color for the next objects that will be added to the plot.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setColor-java.lang.String-java.lang.String-">setColor(String, String)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the drawing color for the next objects that will be added to the plot.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#setColor-java.awt.Color-">setColor(Color)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">use the corresponding method of the Plot class</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setColor-java.awt.Color-">setColor(Color)</a></span> - Static method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Sets the default (global) color used for ROI outlines.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#setColor-java.awt.Color-">setColor(Color)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by setForegroundColor()</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setColor-java.awt.Color-">setColor(Color)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Sets current foreground color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#setColor-java.awt.Color-">setColor(Color)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Sets the foreground drawing color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setColor-java.awt.Color-">setColor(Color)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Sets the foreground color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setColor-int-">setColor(int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Sets the fill/draw color, where <code>color</code> is an RGB int.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#setColor-java.awt.Color-">setColor(Color)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Sets the foreground fill/draw color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setColor-java.awt.Color-">setColor(Color)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets the default fill/draw value to the pixel
value closest to the specified color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setColor-int-">setColor(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets the default fill/draw value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setColor-double-">setColor(double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets the default fill/draw value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#setColor-java.awt.Color-">setColor(Color)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Sets the foreground fill/draw color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#setColorModel-java.awt.image.ColorModel-">setColorModel(ColorModel)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Assigns a new color model to this stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setColorModel-java.awt.image.ColorModel-">setColorModel(ColorModel)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setColorModel-java.awt.image.ColorModel-">setColorModel(ColorModel)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets the color model.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setColumnHeadings-java.lang.String-">setColumnHeadings(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Clears the "Results" window and sets the column headings to
those in the tab-delimited 'headings' String.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#setColumnHeadings-java.lang.String-">setColumnHeadings(String)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Clears this TextPanel and sets the column headings to
those in the tab-delimited 'headings' String.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#setCommand-java.lang.String-">setCommand(String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd>
<div class="block">Starts recording a command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#setCommandName-java.lang.String-">setCommandName(String)</a></span> - Static method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageRoi.html#setComposite-java.awt.Composite-">setComposite(Composite)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageRoi.html" title="class in ij.gui">ImageRoi</a></dt>
<dd>
<div class="block">Sets the composite mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setCornerDiameter-int-">setCornerDiameter(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Sets the rounded rectangle corner diameter (pixels).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#setCounter-int-">setCounter(int)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#setCounterInfo-int:A-">setCounterInfo(int[])</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#setCounters-int:A-">setCounters(int[])</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#setCrossLoc-int-int-int-">setCrossLoc(int, int, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#setCTable-float:A-java.lang.String-">setCTable(float[], String)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Sets the calibration table.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#setCurrentFont-java.awt.Font-">setCurrentFont(Font)</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Set the current (instance) font.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#setCurrentWindow-ij.gui.ImageWindow-">setCurrentWindow(ImageWindow)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Makes the image contained in the specified window the active image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setCursor-int-int-int-int-">setCursor(int, int, int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Sets the cursor based on the current tool and cursor location.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setCursor-java.awt.Cursor-int-">setCursor(Cursor, int)</a></span> - Static method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Experimental</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#setCursor-ij.ImagePlus-ij.gui.Roi-">setCursor(ImagePlus, Roi)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setCustomRoi-boolean-">setCustomRoi(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Allows plugins (e.g., Orthogonal_Views) to create a custom ROI using a display list.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#setDebugger-ij.macro.Debugger-">setDebugger(Debugger)</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setDebugMode-boolean-">setDebugMode(boolean)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Enable/disable debug mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#setDebugMode-int-">setDebugMode(int)</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#setDecimalPlaces-int-int-">setDecimalPlaces(int, int)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setDefault16bitRange-int-">setDefault16bitRange(int)</a></span> - Static method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Set the default 16-bit display range, where 'bitDepth' must be 0 (auto-scaling),
8 (0-255), 10 (0-1023), 12 (0-4095, 14 (0-16383), 15 (0-32767) or 16 (0-65535).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#setDefaultAngle-double-">setDefaultAngle(double)</a></span> - Static method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Sets the default angle.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#setDefaultCounter-int-">setDefaultCounter(int)</a></span> - Static method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#setDefaultCrossColor-java.awt.Color-">setDefaultCrossColor(Color)</a></span> - Static method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Deprecated</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/DirectoryChooser.html#setDefaultDirectory-java.lang.String-">setDefaultDirectory(String)</a></span> - Static method in class ij.io.<a href="ij/io/DirectoryChooser.html" title="class in ij.io">DirectoryChooser</a></dt>
<dd>
<div class="block">Sets the default directory presented in the dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/OpenDialog.html#setDefaultDirectory-java.lang.String-">setDefaultDirectory(String)</a></span> - Static method in class ij.io.<a href="ij/io/OpenDialog.html" title="class in ij.io">OpenDialog</a></dt>
<dd>
<div class="block">Sets the current working directory.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#setDefaultDirectory-java.lang.String-">setDefaultDirectory(String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#setDefaultDoubleHeaded-boolean-">setDefaultDoubleHeaded(boolean)</a></span> - Static method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setDefaultFillColor-java.awt.Color-">setDefaultFillColor(Color)</a></span> - Static method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#setDefaultFillColor-java.awt.Color-">setDefaultFillColor(Color)</a></span> - Static method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Sets the default fill (background) color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#setDefaultHeadings--">setDefaultHeadings()</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Sets the headings used by the Measure command ("Area", "Mean", etc.).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#setDefaultHeadings--">setDefaultHeadings()</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Sets the default headings ("Area", "Mean", etc.).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#setDefaultHeadSize-double-">setDefaultHeadSize(double)</a></span> - Static method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#setDefaultMarkerSize-java.lang.String-">setDefaultMarkerSize(String)</a></span> - Static method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span> </div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#setDefaultOutline-boolean-">setDefaultOutline(boolean)</a></span> - Static method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#setDefaultSize-int-">setDefaultSize(int)</a></span> - Static method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#setDefaultString-int-java.lang.String-">setDefaultString(int, String)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#setDefaultStyle-int-">setDefaultStyle(int)</a></span> - Static method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#setDefaultType-int-">setDefaultType(int)</a></span> - Static method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#setDefaultWidth-double-">setDefaultWidth(double)</a></span> - Static method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilterRunner.html#setDialog-ij.gui.GenericDialog-">setDialog(GenericDialog)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilterRunner.html" title="class in ij.plugin.filter">PlugInFilterRunner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setDimensions-int-int-int-">setDimensions(int, int, int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Sets the 3rd, 4th and 5th dimensions, where
<code>nChannels</code>*<code>nSlices</code>*<code>nFrames</code>
must be equal to the stack size.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setDisplayList-java.util.Vector-">setDisplayList(Vector)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by ImagePlus.setOverlay(ij.gui.Overlay)</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setDisplayList-java.awt.Shape-java.awt.Color-java.awt.BasicStroke-">setDisplayList(Shape, Color, BasicStroke)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by ImagePlus.setOverlay(Shape, Color, BasicStroke)</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setDisplayList-ij.gui.Roi-java.awt.Color-">setDisplayList(Roi, Color)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by ImagePlus.setOverlay(Roi, Color, int, Color)</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setDisplayMode-int-">setDisplayMode(int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Sets the display mode of composite color images, where 'mode'
should be IJ.COMPOSITE, IJ.COLOR or IJ.GRAYSCALE.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#setDisplayRange-double-double-">setDisplayRange(double, double)</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setDisplayRange-double-double-">setDisplayRange(double, double)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Sets the display range of the current channel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setDisplayRange-double-double-int-">setDisplayRange(double, double, int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Sets the display range of specified channels in an RGB image, where 4=red,
2=green, 1=blue, 6=red+green, etc.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageConverter.html#setDoScaling-boolean-">setDoScaling(boolean)</a></span> - Static method in class ij.process.<a href="ij/process/ImageConverter.html" title="class in ij.process">ImageConverter</a></dt>
<dd>
<div class="block">Set true to scale to 0-255 when converting short to byte or float
to byte and to 0-65535 when converting float to short.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#setDoubleHeaded-boolean-">setDoubleHeaded(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setDrawingColor-int-int-boolean-">setDrawingColor(int, int, boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Sets the foreground drawing color (or background color if
'setBackground' is true) to the color of the pixel at (ox,oy).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setDrawingSize-int-int-">setDrawingSize(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Obsolete; replaced by setSize()</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#setDrawOffset-boolean-">setDrawOffset(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#setDrawOffset-boolean-">setDrawOffset(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setDrawOffset-boolean-">setDrawOffset(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#setDrawStringMode-boolean-">setDrawStringMode(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#setEchoChar-char-">setEchoChar(char)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Sets the echo character for the next string field.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#setEditMode-ij.ImagePlus-boolean-">setEditMode(ImagePlus, boolean)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/WildcardMatch.html#setEscapeChar-char-">setEscapeChar(char)</a></span> - Method in class ij.util.<a href="ij/util/WildcardMatch.html" title="class in ij.util">WildcardMatch</a></dt>
<dd>
<div class="block">Sets the new character to be used as an escape character, overriding the
the default of '\'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setExceptionHandler-ij.IJ.ExceptionHandler-">setExceptionHandler(IJ.ExceptionHandler)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Installs a custom exception handler that
overrides the handleException() method.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/SaveDialog.html#setExtension-java.lang.String-java.lang.String-">setExtension(String, String)</a></span> - Static method in class ij.io.<a href="ij/io/SaveDialog.html" title="class in ij.io">SaveDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#setExtraArrayElements-int-">setExtraArrayElements(int)</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Add a given number of extra elements to array of parameters (independent vaiables)
for private use in the user function.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#setf-int-int-float-">setf(int, int, float)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#setf-int-float-">setf(int, float)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setf-int-int-float-">setf(int, int, float)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setf-int-float-">setf(int, float)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#setf-int-int-float-">setf(int, int, float)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#setf-int-float-">setf(int, float)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setf-int-int-float-">setf(int, int, float)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets the value of the pixel at (x,y) to 'value'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setf-int-float-">setf(int, float)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#setf-int-int-float-">setf(int, int, float)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#setf-int-float-">setf(int, float)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setFileInfo-ij.io.FileInfo-">setFileInfo(FileInfo)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Saves this image's FileInfo so it can be later
retieved using getOriginalFileInfo().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#setFileName-java.lang.String-">setFileName(String)</a></span> - Method in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Macro_Runner.html#setFilePath-java.lang.String-">setFilePath(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Macro_Runner.html" title="class in ij.plugin">Macro_Runner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#setFillColor-java.awt.Color-">setFillColor(Color)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Sets the fill color of all the ROIs in this overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setFillColor-java.awt.Color-">setFillColor(Color)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Sets the fill color used to display this ROI, or set to null to display it transparently.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setFlattenScale-double-">setFlattenScale(double)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setFloatArray-float:A:A-">setFloatArray(float[][])</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Replaces the pixel data with contents of the specified 2D float array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#setFocusable-boolean-">setFocusable(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MultiLineLabel.html#setFont-java.awt.Font-">setFont(Font)</a></span> - Method in class ij.gui.<a href="ij/gui/MultiLineLabel.html" title="class in ij.gui">MultiLineLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setFont-java.awt.Font-">setFont(Font)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the font for all following drawLabel etc.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setFont-int-float-">setFont(int, float)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the font size and style for all following drawLabel etc.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#setFont-java.lang.String-int-int-">setFont(String, int, int)</a></span> - Static method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Sets the global font face, size and style that will be used by
TextROIs interactively created using the text tool.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#setFont-java.lang.String-int-int-boolean-">setFont(String, int, int, boolean)</a></span> - Static method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Sets the font face, size, style and antialiasing mode that will
be used by TextROIs interactively created using the text tool.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#setFont-java.awt.Font-">setFont(Font)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setFont-java.awt.Font-">setFont(Font)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets the font used by drawString().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#setFont-java.awt.Font-boolean-">setFont(Font, boolean)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#setFontColor-java.lang.String-">setFontColor(String)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Sets the color ("blue", "black", etc.) of the font used to label outlines in the next particle analyzer instance.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#setFontSize-int-">setFontSize(int)</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Set the size (in points) used for the fonts in ImageJ menus.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#setFontSize-int-">setFontSize(int)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Sets the size of the font used to label outlines in the next particle analyzer instance.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#setForegroundColor-java.awt.Color-">setForegroundColor(Color)</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setForegroundColor-int-int-int-">setForegroundColor(int, int, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Sets the foreground color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#setForegroundColor-java.awt.Color-">setForegroundColor(Color)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setFormatFlags-int-">setFormatFlags(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the flags that control the axes format.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setFrameSize-int-int-">setFrameSize(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the plot frame size in (unscaled) pixels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#setFromFloatArrays-float:A:A-">setFromFloatArrays(float[][])</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#setFromFloatProcessors-ij.process.FloatProcessor:A-">setFromFloatProcessors(FloatProcessor[])</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setFrozen-boolean-">setFrozen(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Freezes or unfreezes the plot.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#setFunction-int-double:A-java.lang.String-">setFunction(int, double[], String)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Sets the calibration function, coefficient table and unit (e.g.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#setFunction-int-double:A-java.lang.String-boolean-">setFunction(int, double[], String, boolean)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#setFunction-ij.measure.UserFunction-int-">setFunction(UserFunction, int)</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Set the the target function, i.e.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setGlobalCalibration-ij.measure.Calibration-">setGlobalCalibration(Calibration)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Sets the system-wide calibration.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#setGlobalJustification-int-">setGlobalJustification(int)</a></span> - Static method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Sets the 'justification' instance variable (must be LEFT, CENTER or RIGHT)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#setHeading-int-java.lang.String-">setHeading(int, String)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">Replaced by addValue(String,double) and setValue(String,int,double)</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#setHeadSize-double-">setHeadSize(double)</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#setHelpLabel-java.lang.String-">setHelpLabel(String)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Sets a replacement label for the "Help" button.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#setHideLabels-boolean-">setHideLabels(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span> </div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#setHideOutputImage-boolean-">setHideOutputImage(boolean)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Set 'hideOutputImage' true to not display the "Show:" image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setHideOverlay-boolean-">setHideOverlay(boolean)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setHistogramRange-double-double-">setHistogramRange(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Set the range used for histograms of float images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setHistogramSize-int-">setHistogramSize(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Set the number of bins to be used for histograms of float images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setHSB-byte:A-byte:A-byte:A-">setHSB(byte[], byte[], byte[])</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Sets the current pixels from 3 byte arrays (hue, saturation and brightness).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setIgnoreClipRect-boolean-">setIgnoreClipRect(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setIgnoreFlush-boolean-">setIgnoreFlush(boolean)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setIgnoreGlobalCalibration-boolean-">setIgnoreGlobalCalibration(boolean)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setIJMenuBar">setIJMenuBar</a></span> - Variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setIJMenuBar-boolean-">setIJMenuBar(boolean)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setIJMenuBar--">setIJMenuBar()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#setIJMenuBar">setIJMenuBar</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Set MenuBar on Macs running Java 8.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Concatenator.html#setIm5D-boolean-">setIm5D(boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Concatenator.html" title="class in ij.plugin">Concatenator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#setImage-ij.ImagePlus-">setImage(ImagePlus)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setImage-ij.ImagePlus-">setImage(ImagePlus)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setImage-java.awt.Image-">setImage(Image)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Replaces the image, if any, with the one specified.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setImage-ij.ImagePlus-">setImage(ImagePlus)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Replaces this image with the specified ImagePlus.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#setImage-ij.ImagePlus-">setImage(ImagePlus)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Disables the density calibation if the specified image has a differenent bit depth.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#setImage-ij.ImagePlus-">setImage(ImagePlus)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd>
<div class="block">Explicitly set image to be projected.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#setImageJMenuBar-ij.gui.ImageWindow-">setImageJMenuBar(ImageWindow)</a></span> - Static method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setImagePlus-ij.ImagePlus-">setImagePlus(ImagePlus)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the ImagePlus where the plot will be displayed.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#setImagesURL-java.lang.String-">setImagesURL(String)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Sets the URL of the directory that contains the ImageJ sample images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setImageUpdated--">setImageUpdated()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">ImagePlus.updateAndDraw calls this method to force the paint()
method to update the image from the ImageProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#setInitialParameters-double:A-">setInitialParameters(double[])</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Sets the initial parameters, which override the default initial parameters.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setInputEvent-java.awt.event.InputEvent-">setInputEvent(InputEvent)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#setInsets-int-int-int-">setInsets(int, int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Set the insets (margins), in pixels, that will be
used for the next component added to the dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setInstanceColor-java.awt.Color-">setInstanceColor(Color)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by setStrokeColor()</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setIntArray-int:A:A-">setIntArray(int[][])</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Replaces the pixel data with contents of the specified 2D int array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setInterpolate-boolean-">setInterpolate(boolean)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">This method has been replaced by setInterpolationMethod().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setInterpolationMethod-int-">setInterpolationMethod(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Use this method to set the interpolation method (NONE,
BILINEAR or BICUBIC) used by scale(), resize() and rotate().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#setInvertY-boolean-">setInvertY(boolean)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Sets the 'invertY' flag.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#setIsCalibrationBar-boolean-">setIsCalibrationBar(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setIsCursor-boolean-">setIsCursor(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#setIsMacroWindow-boolean-">setIsMacroWindow(boolean)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#setJpegQuality-int-">setJpegQuality(int)</a></span> - Static method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd>
<div class="block">Specifies the image quality (0-100).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setJustification-int-">setJustification(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the justification used by addLabel(), where <code>justification</code>
is Plot.LEFT, Plot.CENTER or Plot.RIGHT.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#setJustification-int-">setJustification(int)</a></span> - Method in class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Sets the 'justification' instance variable (must be LEFT, CENTER or RIGHT)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setJustification-int-">setJustification(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets the justification used by drawString(), where <code>justification</code>
is CENTER_JUSTIFY, RIGHT_JUSTIFY or LEFT_JUSTIFY.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setKeyDown-int-">setKeyDown(int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setKeyUp-int-">setKeyUp(int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#setLabel-java.lang.String-int-">setLabel(String, int)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Adds a label to the beginning of the specified row,
or updates an existing lable, where 0<=row<counter.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#setLabelColor-java.awt.Color-">setLabelColor(Color)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#setLabelFont-java.awt.Font-">setLabelFont(Font)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/OpenDialog.html#setLastDirectory-java.lang.String-">setLastDirectory(String)</a></span> - Static method in class ij.io.<a href="ij/io/OpenDialog.html" title="class in ij.io">OpenDialog</a></dt>
<dd>
<div class="block">Sets the path to the directory containing the last file opened by the user.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/OpenDialog.html#setLastName-java.lang.String-">setLastName(String)</a></span> - Static method in class ij.io.<a href="ij/io/OpenDialog.html" title="class in ij.io">OpenDialog</a></dt>
<dd>
<div class="block">Sets the name of the last file opened by the user.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setLegend-java.lang.String-int-">setLegend(String, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adds a legend.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setLimits-double-double-double-double-">setLimits(double, double, double, double)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the x-axis and y-axis range.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#setLimits-double-double-double-double-">setLimits(double, double, double, double)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">use the corresponding method of the Plot class</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setLimitsToDefaults-boolean-">setLimitsToDefaults(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the plot range to the initial value determined from minima&maxima or given by setLimits.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setLimitsToFit-boolean-">setLimitsToFit(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the plot range to encompass all data.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#setLine-int-java.lang.String-">setLine(int, String)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Replaces the contents of the specified line, where 'index'
must be greater than or equal to zero and less than
the value returned by getLineCount().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setLineWidth-int-">setLineWidth(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Changes the line width for the next objects that will be added to the plot.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setLineWidth-float-">setLineWidth(float)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Changes the line width for the next objects that will be added to the plot.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#setLineWidth-int-">setLineWidth(int)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">use the corresponding method of the Plot class</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setLineWidth-int-">setLineWidth(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by setStrokeWidth(int)</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#setLineWidth-int-">setLineWidth(int)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Sets the outline line width for the next ParticleAnalyzer instance.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setLineWidth-int-">setLineWidth(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets the line width used by lineTo() and drawDot().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#setLocation-int-int-">setLocation(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#setLocation-int-int-">setLocation(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#setLocation-double-double-">setLocation(double, double)</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setLocation-int-int-">setLocation(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Set the location of the ROI in image coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setLocation-double-double-">setLocation(double, double)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Set the location of the ROI in image coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#setLocationAndSize-int-int-int-int-">setLocationAndSize(int, int, int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd>
<div class="block">Moves and resizes this window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setLogScaleX--">setLogScaleX()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets log scale in x.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setLogScaleY--">setLogScaleY()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#setLoopBackAndForth-boolean-">setLoopBackAndForth(boolean)</a></span> - Static method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Set the default state of the animation "Loop back and forth" flag</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setLut-ij.process.LUT-">setLut(LUT)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Assigns a LUT (lookup table) to this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setLut-ij.process.LUT-">setLut(LUT)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setLutAnimation-boolean-">setLutAnimation(boolean)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">For 16 and 32 bit processors, set 'lutAnimation' true
to have createImage() use the cached 8-bit version
of the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#setLuts-ij.process.LUT:A-">setLuts(LUT[])</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setMagnification-double-">setMagnification(double)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#setMagnification-double-">setMagnification(double)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">The image of a PlotCanvas is always shown at 100% magnification unless the plot is frozen</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setMask-ij.process.ImageProcessor-">setMask(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Defines a byte mask that limits processing to an
irregular ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#setMaxError-double-">setMaxError(double)</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Set the maximum error.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#setMaxError-double-">setMaxError(double)</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Sets the accuracy of convergence.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#setMaxError-double-double-">setMaxError(double, double)</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Sets the accuracy of convergence.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#setMaximum-int-">setMaximum(int)</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#setMaximumThreads-int-">setMaximumThreads(int)</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Call setMaximuThreads(1) to avoid multi-threaded execution (in case the user-provided
target function does not allow moultithreading).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setMaxIntervals-int-">setMaxIntervals(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the maximum number of intervals in a plot.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#setMaxIterations-int-">setMaxIterations(int)</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Set maximum number of iterations allowed (sum of iteration count for all restarts)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#setMaxIterations-int-">setMaxIterations(int)</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Set maximum number of iterations allowed (including all restarts and all threads).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#setMaxRestarts-int-">setMaxRestarts(int)</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Set maximum number of minimization restarts to do.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#setMeasurement-int-boolean-">setMeasurement(int, boolean)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Sets the specified system-wide measurement option.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#setMeasurements-int-">setMeasurements(int)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Sets the system-wide measurement options.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#setMenuBarCount">setMenuBarCount</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#setMenuBarTime">setMenuBarTime</a></span> - Static variable in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#setMethod-java.lang.String-">setMethod(String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd>
<div class="block">Sets the thresholding method ("Default", "Huang", etc).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Thresholder.html#setMethod-java.lang.String-">setMethod(String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Thresholder.html" title="class in ij.plugin">Thresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#setMethod-int-">setMethod(int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#setMinAndMax-double-double-">setMinAndMax(double, double)</a></span> - Static method in class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd>
<div class="block">Sets the y-axis min and max.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setMinAndMax-double-double-">setMinAndMax(double, double)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Sets the display range (minimum and maximum displayed pixel values) of the current image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setMinAndMax-ij.ImagePlus-double-double-">setMinAndMax(ImagePlus, double, double)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Sets the display range (minimum and maximum displayed pixel values) of the specified image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setMinAndMax-double-double-int-">setMinAndMax(double, double, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Sets the minimum and maximum displayed pixel values on the specified RGB
channels, where 4=red, 2=green and 1=blue.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#setMinAndMax-double-double-">setMinAndMax(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Maps the entries in this image's LUT from min-max to 0-255.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setMinAndMax-double-double-">setMinAndMax(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Uses a table look-up to map the pixels in this image from min-max to 0-255.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setMinAndMax-double-double-int-">setMinAndMax(double, double, int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#setMinAndMax-double-double-">setMinAndMax(double, double)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Sets the min and max variables that control how real
pixel values are mapped to 0-255 screen values.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setMinAndMax-double-double-">setMinAndMax(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">This image will be displayed by mapping pixel values in the
range min-max to screen values in the range 0-255.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#setMinAndMax-double-double-">setMinAndMax(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Sets the min and max variables that control how real
pixel values are mapped to 0-255 screen values.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#setMinimum-int-">setMinimum(int)</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setMinorTickLength-int-">setMinorTickLength(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the length of the minor tick in pixels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#setMode-int-">setMode(int)</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#setMode-java.lang.String-">setMode(String)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd>
<div class="block">Sets the current mode ("Red","B&W" or"Over/Under").</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setName-java.lang.String-">setName(String)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Sets the name of this ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#setNaNEmptyCells-boolean-">setNaNEmptyCells(boolean)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Set 'true' to initially fill data arrays with NaNs instead of zeros.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#setNextLocation-java.awt.Point-">setNextLocation(Point)</a></span> - Static method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd>
<div class="block">Causes the next image to be displayed at the specified location.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#setNextLocation-int-int-">setNextLocation(int, int)</a></span> - Static method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd>
<div class="block">Causes the next image to be displayed at the specified location.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/WaitForUserDialog.html#setNextLocation-int-int-">setNextLocation(int, int)</a></span> - Static method in class ij.gui.<a href="ij/gui/WaitForUserDialog.html" title="class in ij.gui">WaitForUserDialog</a></dt>
<dd>
<div class="block">Display the next WaitForUser dialog at the specified location.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setNonScalable-boolean-">setNonScalable(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Set 'nonScalable' true to have TextRois in a display
list drawn at a fixed location and size.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ContrastEnhancer.html#setNormalize-boolean-">setNormalize(boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ContrastEnhancer.html" title="class in ij.plugin">ContrastEnhancer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Convolver.html#setNormalize-boolean-">setNormalize(boolean)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Convolver.html" title="class in ij.plugin.filter">Convolver</a></dt>
<dd>
<div class="block">If 'normalize' is true (the default), the convolve(), convolveFloat() and
convolveFloat1D() (4 argument version) methods divide each kernel
coefficient by the sum of the coefficients, preserving image brightness.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotContentsStyleDialog.html#setNPasses-int-">setNPasses(int)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotContentsStyleDialog.html" title="class in ij.gui">PlotContentsStyleDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/BackgroundSubtracter.html#setNPasses-int-">setNPasses(int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/BackgroundSubtracter.html" title="class in ij.plugin.filter">BackgroundSubtracter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Binary.html#setNPasses-int-">setNPasses(int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Binary.html" title="class in ij.plugin.filter">Binary</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Convolver.html#setNPasses-int-">setNPasses(int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Convolver.html" title="class in ij.plugin.filter">Convolver</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#setNPasses-int-">setNPasses(int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">Prepare the progress bar.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ExtendedPlugInFilter.html#setNPasses-int-">setNPasses(int)</a></span> - Method in interface ij.plugin.filter.<a href="ij/plugin/filter/ExtendedPlugInFilter.html" title="interface in ij.plugin.filter">ExtendedPlugInFilter</a></dt>
<dd>
<div class="block">This method is called by ImageJ to inform the plugin-filter
about the passes to its run method.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/GaussianBlur.html#setNPasses-int-">setNPasses(int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/GaussianBlur.html" title="class in ij.plugin.filter">GaussianBlur</a></dt>
<dd>
<div class="block">Set the number of passes of the blur1Direction method.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ImageMath.html#setNPasses-int-">setNPasses(int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ImageMath.html" title="class in ij.plugin.filter">ImageMath</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#setNPasses-int-">setNPasses(int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd>
<div class="block">Set his to the number of images to process (for the watershed progress bar only).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#setNPasses-int-">setNPasses(int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd>
<div class="block">This method is called by ImageJ to set the number of calls to run(ip)
corresponding to 100% of the progress bar</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Rotator.html#setNPasses-int-">setNPasses(int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Rotator.html" title="class in ij.plugin.filter">Rotator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/StackLabeler.html#setNPasses-int-">setNPasses(int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/StackLabeler.html" title="class in ij.plugin.filter">StackLabeler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Translator.html#setNPasses-int-">setNPasses(int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Translator.html" title="class in ij.plugin.filter">Translator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/UnsharpMask.html#setNPasses-int-">setNPasses(int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/UnsharpMask.html" title="class in ij.plugin.filter">UnsharpMask</a></dt>
<dd>
<div class="block">Since most computing time is spent in GaussianBlur, forward the
information about the number of passes to Gaussian Blur.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#setOffsetMultiplySlopeParams-int-int-int-">setOffsetMultiplySlopeParams(int, int, int)</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">For improved fitting performance when using a custom fit formula, one may
specify parameters that can be calculated directly by linear regression.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#setOKLabel-java.lang.String-">setOKLabel(String)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Sets a replacement label for the "OK" button.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageRoi.html#setOpacity-double-">setOpacity(double)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageRoi.html" title="class in ij.gui">ImageRoi</a></dt>
<dd>
<div class="block">Sets the composite mode using the specified opacity (alpha), in the
range 0.0-1.0, where 0.0 is fully transparent and 1.0 is fully opaque.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setOpenAsHyperStack-boolean-">setOpenAsHyperStack(boolean)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#setOpenUsingPlugins-boolean-">setOpenUsingPlugins(boolean)</a></span> - Static method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Open all images using HandleExtraFileTypes.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#setOption-java.lang.String-boolean-">setOption(String, boolean)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Macro.html#setOptions-java.lang.String-">setOptions(String)</a></span> - Static method in class ij.<a href="ij/Macro.html" title="class in ij">Macro</a></dt>
<dd>
<div class="block">Define a set of Macro options for the current Thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Macro.html#setOptions-java.lang.Thread-java.lang.String-">setOptions(Thread, String)</a></span> - Static method in class ij.<a href="ij/Macro.html" title="class in ij">Macro</a></dt>
<dd>
<div class="block">Define a set of Macro options for a Thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#setOutline-boolean-">setOutline(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#setOutputType-int-">setOutputType(int)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">Sets the output type (BYTE_OVERWRITE, BYTE, SHORT or FLOAT)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setOverColor-int-int-int-">setOverColor(int, int, int)</a></span> - Static method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets the upper Over/Under threshold color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setOverlay-ij.gui.Overlay-">setOverlay(Overlay)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Use ImagePlus.setOverlay(ij.gui.Overlay).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setOverlay-ij.gui.Overlay-">setOverlay(Overlay)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Installs a list of ROIs that will be drawn on this image as a non-destructive overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setOverlay-java.awt.Shape-java.awt.Color-java.awt.BasicStroke-">setOverlay(Shape, Color, BasicStroke)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Creates an Overlay from the specified Shape, Color
and BasicStroke, and assigns it to this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setOverlay-ij.gui.Roi-java.awt.Color-int-java.awt.Color-">setOverlay(Roi, Color, int, Color)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Creates an Overlay from the specified ROI, and assigns it to this image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setOverlay-ij.gui.Overlay-">setOverlay(Overlay)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">This method is used to display virtual stack overlays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setPaintPending-boolean-">setPaintPending(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#setParamResolutions-double:A-">setParamResolutions(double[])</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Set the resolution of the parameters, for problems where the target function is not smooth
but suffers from numerical noise.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setPasteMode-int-">setPasteMode(int)</a></span> - Static method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Sets the Paste transfer mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setPasteMode-java.lang.String-">setPasteMode(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Sets the transfer mode used by the <i>Edit/Paste</i> command, where mode is "Copy", "Blend", "Average", "Difference",
"Transparent", "Transparent2", "AND", "OR", "XOR", "Add", "Subtract", "Multiply", or "Divide".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#setPixels-java.lang.Object-int-">setPixels(Object, int)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Assigns a pixel array to the specified slice,
were 1<=n<=nslices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#setPixels-java.lang.Object-">setPixels(Object)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#setPixels-int-ij.process.FloatProcessor-">setPixels(int, FloatProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Sets the pixels from a FloatProcessor, no scaling.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setPixels-java.lang.Object-">setPixels(Object)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setPixels-int-ij.process.FloatProcessor-">setPixels(int, FloatProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Sets the pixels of one color channel from a FloatProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#setPixels-java.lang.Object-">setPixels(Object)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#setPixels-int-ij.process.FloatProcessor-">setPixels(int, FloatProcessor)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Sets the pixels, and min&max values from a FloatProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setPixels-java.lang.Object-">setPixels(Object)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets a new pixel array for the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setPixels-int-ij.process.FloatProcessor-">setPixels(int, FloatProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets the pixels (of one color channel for RGB images) from a FloatProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#setPixels-java.lang.Object-">setPixels(Object)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#setPixels-int-ij.process.FloatProcessor-">setPixels(int, FloatProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Sets the pixels from a FloatProcessor, no scaling.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#setPixels-java.lang.Object-int-">setPixels(Object, int)</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Assigns a pixel array to the specified slice,
were 1<=n<=nslices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#setPlot-ij.gui.Plot-">setPlot(Plot)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">Tells the PlotCanvas which plot to use for zooming etc.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#setPlot-ij.gui.Plot-">setPlot(Plot)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Sets the Plot object shown in this PlotWindow.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setPlotMaker-ij.gui.PlotMaker-">setPlotMaker(PlotMaker)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setPlotObjectStyles-int-java.lang.String-">setPlotObjectStyles(int, String)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Set the style of the i-th PlotObject (curve, label, ...) in the sequence
they are plotted (i.e., foreground last), from a String with comma delimiters:
Main Color, Secondary Color (or "none"), Line Width [, Symbol shape for XY_DATA] [,hidden]</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#setPointType-int-">setPointType(int)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Sets the point type (0=hybrid, 1=crosshair, 2=dot, 3=circle).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/PolygonFiller.html#setPolygon-int:A-int:A-int-">setPolygon(int[], int[], int)</a></span> - Method in class ij.process.<a href="ij/process/PolygonFiller.html" title="class in ij.process">PolygonFiller</a></dt>
<dd>
<div class="block">Specifies the polygon to be filled.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setPosition-int-">setPosition(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Sets the stack position (image number) of this ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setPosition-int-int-int-">setPosition(int, int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Sets the hyperstack position of this ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setPosition-ij.ImagePlus-">setPosition(ImagePlus)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Sets the position of this ROI based on the stack position of the specified image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#setPosition-int-int-int-">setPosition(int, int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setPosition-int-int-int-">setPosition(int, int, int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Sets the current hyperstack position and updates the display,
where 'channel', 'slice' and 'frame' are one-based indexes.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setPosition-int-">setPosition(int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Set the current hyperstack position based on the stack index 'n' (one-based).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setPositionWithoutUpdate-int-int-int-">setPositionWithoutUpdate(int, int, int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Sets the current hyperstack position without updating the display,
where 'channel', 'slice' and 'frame' are one-based indexes.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#setPrecision-int-">setPrecision(int)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Sets the decimal places (digits to the right of decimal point)
that are used when this table is displayed.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#setPrecision-int-">setPrecision(int)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Sets the number of digits displayed to the right of decimal point.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setPreviousMinMax--">setPreviousMinMax()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">reverts plot range to previous values and updates the image</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageRoi.html#setProcessor-ij.process.ImageProcessor-">setProcessor(ImageProcessor)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageRoi.html" title="class in ij.gui">ImageRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setProcessor-ij.process.ImageProcessor-">setProcessor(ImageProcessor)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Replaces the ImageProcessor with the one specified and updates the
display.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setProcessor-java.lang.String-ij.process.ImageProcessor-">setProcessor(String, ImageProcessor)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Replaces the ImageProcessor with the one specified and updates the display.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#setProcessor-ij.process.ImageProcessor-int-">setProcessor(ImageProcessor, int)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Assigns the pixel array of an ImageProcessor to the
specified slice, were 1<=n<=nslices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ContrastEnhancer.html#setProcessStack-boolean-">setProcessStack(boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ContrastEnhancer.html" title="class in ij.plugin">ContrastEnhancer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setProgressBar-ij.gui.ProgressBar-">setProgressBar(ProgressBar)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Assigns a progress bar to this processor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setProperties-java.lang.String-">setProperties(String)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setProperty-java.lang.String-java.lang.String-">setProperty(String, String)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setProperty-java.lang.String-java.lang.Object-">setProperty(String, Object)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Adds a key-value pair to IJ.properties.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setProperty-java.lang.String-java.lang.Object-">setProperty(String, Object)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Adds a key-value pair to this image's properties.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setPrototypeOverlay-ij.gui.Overlay-">setPrototypeOverlay(Overlay)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/JpegWriter.html#setQuality-int-">setQuality(int)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/JpegWriter.html" title="class in ij.plugin">JpegWriter</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by FileSaver.setJpegQuality()</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#setRandomSeed-int-">setRandomSeed(int)</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Set a seed to initialize the random number generator, which is used for initialization
of the simplex.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setRawThreshold-ij.ImagePlus-double-double-java.lang.String-">setRawThreshold(ImagePlus, double, double, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">This is a version of setThreshold() that always uses raw (uncalibrated) values
in the range 0-255 for 8-bit images and 0-65535 for 16-bit images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#setRedirectImage-ij.ImagePlus-">setRedirectImage(ImagePlus)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Set the "Redirect To" image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#setRestarts-int-">setRestarts(int)</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Set maximum number of simplex restarts to do.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#setResultsTable-ij.measure.ResultsTable-">setResultsTable(ResultsTable)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#setResultsTable-ij.measure.ResultsTable-">setResultsTable(ResultsTable)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Sets the ResultsTable to be used by the next
ParticleAnalyzer instance.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#setResultsTable-ij.measure.ResultsTable-">setResultsTable(ResultsTable)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Sets the ResultsTable associated with this TextPanel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setRGB-byte:A-byte:A-byte:A-">setRGB(byte[], byte[], byte[])</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Sets the current pixels from 3 byte arrays (reg, green, blue).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setRGBWeights-double-double-double-">setRGBWeights(double, double, double)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">This is a thread-safe (non-static) version of setWeightingFactors().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setRGBWeights-double:A-">setRGBWeights(double[])</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">This is a thread-safe (non-static) version of setWeightingFactors().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setRoi-ij.gui.Roi-">setRoi(Roi)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Assigns the specified ROI to this image and displays it.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setRoi-ij.gui.Roi-boolean-">setRoi(Roi, boolean)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Assigns 'newRoi' to this image and displays it if 'updateDisplay' is true.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setRoi-int-int-int-int-">setRoi(int, int, int, int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Creates a rectangular selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setRoi-java.awt.Rectangle-">setRoi(Rectangle)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Creates a rectangular selection.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#setRoi-java.awt.Rectangle-">setRoi(Rectangle)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setRoi-java.awt.Rectangle-">setRoi(Rectangle)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Defines a rectangular region of interest and sets the mask
to null if this ROI is not the same size as the previous one.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setRoi-int-int-int-int-">setRoi(int, int, int, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Defines a rectangular region of interest and sets the mask to
null if this ROI is not the same size as the previous one.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setRoi-ij.gui.Roi-">setRoi(Roi)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Defines a non-rectangular region of interest that will consist of a
rectangular ROI and a mask.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setRoi-java.awt.Polygon-">setRoi(Polygon)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Defines a polygonal region of interest that will consist of a
rectangular ROI and a mask.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#setRoiManager-ij.plugin.frame.RoiManager-">setRoiManager(RoiManager)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Sets the RoiManager to be used by the next ParticleAnalyzer
instance.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setRotationCenter-double-double-">setRotationCenter(double, double)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setRoundRectArcSize-int-">setRoundRectArcSize(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Obsolete; replaced by setCornerDiameter().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#setRoundRectArcSize-int-">setRoundRectArcSize(int)</a></span> - Static method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Sets the rounded rectangle corner diameter (pixels).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setScale-float-">setScale(float)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the scale.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setScaleToFit-boolean-">setScaleToFit(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#setSelectedIndexes-int:A-">setSelectedIndexes(int[])</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Selects multiple ROIs, where 'indexes' is an array of integers, each
greater than or equal to 0 and less than the value returned by getCount().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#setSelection-int-int-">setSelection(int, int)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Creates a selection and insures that it is visible.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setShowAllColor-java.awt.Color-">setShowAllColor(Color)</a></span> - Static method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Obsolete</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setShowAllList-ij.gui.Overlay-">setShowAllList(Overlay)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setShowAllROIs-boolean-">setShowAllROIs(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Obsolete</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileOpener.html#setShowConflictMessage-boolean-">setShowConflictMessage(boolean)</a></span> - Static method in class ij.io.<a href="ij/io/FileOpener.html" title="class in ij.io">FileOpener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setShowCursorStatus-boolean-">setShowCursorStatus(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Called by IJ.showStatus() to prevent status bar text from
being overwritten until the cursor moves at least 12 pixels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#setShowLabels-boolean-">setShowLabels(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#setShowProgress-boolean-">setShowProgress(boolean)</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Enables/disables display of the progress bar during transforms.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#setSigned16BitCalibration--">setSigned16BitCalibration()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Sets up a calibration function that subtracts 32,768 from pixel values.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#setSilentMode-boolean-">setSilentMode(boolean)</a></span> - Method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">The "Opening: path" status message is not displayed in silent mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setSize-int-int-">setSize(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setSize-int-int-">setSize(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the canvas size in (unscaled) pixels and sets the scale to 1.0.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#setSize-int-">setSize(int)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Sets the point size, where 'size' is 0-4.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/ArrayUtil.html#setSize-int-">setSize(int)</a></span> - Method in class ij.util.<a href="ij/util/ArrayUtil.html" title="class in ij.util">ArrayUtil</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setSlice-int-">setSlice(int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Switches to the specified stack slice, where 1<='slice'<=stack-size.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setSlice-int-">setSlice(int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Displays the specified stack image, where 1<=n<=stackSize.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#setSliceLabel-java.lang.String-int-">setSliceLabel(String, int)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Sets the label of the specified slice, were 1<=n<=nslices.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#setSliceLabel-java.lang.String-int-">setSliceLabel(String, int)</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Does nothing.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setSliceNumber-int-">setSliceNumber(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">PlugInFilterRunner uses this method to set the slice number.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setSliceWithoutUpdate-int-">setSliceWithoutUpdate(int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Displays the specified stack image (1<=n<=stackSize)
without updating the display.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#setSliderHeight-int-">setSliderHeight(int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#setSmartRecording-boolean-">setSmartRecording(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Unchanged parameters are not recorder in 'smart recording' mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setSnapshotCopyMode-boolean-">setSnapshotCopyMode(boolean)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">The getPixelsCopy() method returns a reference to the
snapshot buffer if it is not null and 'snapshotCopyMode' is true.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#setSnapshotPixels-java.lang.Object-">setSnapshotPixels(Object)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setSnapshotPixels-java.lang.Object-">setSnapshotPixels(Object)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#setSnapshotPixels-java.lang.Object-">setSnapshotPixels(Object)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setSnapshotPixels-java.lang.Object-">setSnapshotPixels(Object)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets a new pixel array for the snapshot (undo) buffer.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#setSnapshotPixels-java.lang.Object-">setSnapshotPixels(Object)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setSourceRect-java.awt.Rectangle-">setSourceRect(Rectangle)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Sets the region of the image (in pixels) to be displayed.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#setSourceRect-java.awt.Rectangle-">setSourceRect(Rectangle)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">Scrolling a PlotCanvas is updating the plot, not viewing part of the plot, unless the plot is frozen</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setStack-ij.ImageStack-">setStack(ImageStack)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Replaces the image with the specified stack and updates the display.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setStack-java.lang.String-ij.ImageStack-">setStack(String, ImageStack)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Replaces the image with the specified stack and updates
the display.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setStack-ij.ImageStack-int-int-int-">setStack(ImageStack, int, int, int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/WandToolOptions.html#setStart-int-int-">setStart(int, int)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/WandToolOptions.html" title="class in ij.plugin">WandToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#setStartSlice-int-">setStartSlice(int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#setStatusAndEsc-java.lang.String-boolean-">setStatusAndEsc(String, boolean)</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Create output on the number of iterations in the ImageJ Status line, e.g.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#setStatusAndEsc-java.lang.String-boolean-">setStatusAndEsc(String, boolean)</a></span> - Method in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Create output on the number of iterations in the ImageJ Status line, e.g.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#setStopSlice-int-">setStopSlice(int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setStroke-java.awt.BasicStroke-">setStroke(BasicStroke)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Sets the Stroke used to draw this ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#setStrokeColor-java.awt.Color-">setStrokeColor(Color)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Sets the stroke color of all the ROIs in this overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setStrokeColor-java.awt.Color-">setStrokeColor(Color)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Sets the color used by this ROI to draw its outline.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#setStrokeWidth-float-">setStrokeWidth(float)</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setStrokeWidth-float-">setStrokeWidth(float)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Sets the width of the line used to draw this ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#setStrokeWidth-double-">setStrokeWidth(double)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">This is a version of setStrokeWidth() that accepts a double argument.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#setStyle-int-">setStyle(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#setStyle-java.lang.String-">setStyle(String)</a></span> - Method in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/Java2.html#setSystemLookAndFeel--">setSystemLookAndFeel()</a></span> - Static method in class ij.util.<a href="ij/util/Java2.html" title="class in ij.util">Java2</a></dt>
<dd>
<div class="block">Sets the Swing look and feel to the system look and feel (Windows only).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setT-int-">setT(int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Sets the hyperstack frame position (one based).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#setT-ij.gui.ImageWindow-int-">setT(ImageWindow, int)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#setTempCurrentImage-ij.ImagePlus-">setTempCurrentImage(ImagePlus)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Makes the specified image temporarily the active
image for this thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#setTempCurrentImage-java.lang.Thread-ij.ImagePlus-">setTempCurrentImage(Thread, ImagePlus)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">Sets a temporary image for the specified thread.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/MultiLineLabel.html#setText-java.lang.String-">setText(String)</a></span> - Method in class ij.gui.<a href="ij/gui/MultiLineLabel.html" title="class in ij.gui">MultiLineLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setTextPanel-ij.text.TextPanel-">setTextPanel(TextPanel)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">TextWindow calls this method with a null argument when the "Results" window is closed.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#setThreads-int-">setThreads(int)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Sets the number of threads (1-32) used by PlugInFilters to process stacks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setThreshold-double-double-">setThreshold(double, double)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Sets the lower and upper threshold levels and displays the image
using red to highlight thresholded pixels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setThreshold-double-double-java.lang.String-">setThreshold(double, double, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Sets the lower and upper threshold levels and displays the image using
the specified <code>displayMode</code> ("Red", "Black & White", "Over/Under" or "No Update").</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setThreshold-ij.ImagePlus-double-double-">setThreshold(ImagePlus, double, double)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Sets the lower and upper threshold levels of the specified image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setThreshold-ij.ImagePlus-double-double-java.lang.String-">setThreshold(ImagePlus, double, double, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Sets the lower and upper threshold levels of the specified image and updates the display using
the specified <code>displayMode</code> ("Red", "Black & White", "Over/Under" or "No Update").</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#setThreshold-double-double-int-">setThreshold(double, double, int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#setThreshold-double-double-int-">setThreshold(double, double, int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setThreshold-double-double-int-">setThreshold(double, double, int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets the lower and upper threshold levels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#setThreshold-double-double-int-">setThreshold(double, double, int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setTickLength-int-">setTickLength(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the length of the major tick in pixels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#setTimeUnit-java.lang.String-">setTimeUnit(String)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Sets the time unit (e.g.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setTitle-java.lang.String-">setTitle(String)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Sets the image name.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#setTitle-java.lang.String-">setTitle(String)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#setTool-java.lang.String-">setTool(String)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#setTool-int-">setTool(int)</a></span> - Method in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setTool-int-">setTool(int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Switches to the specified tool, where id = Toolbar.RECTANGLE (0),
Toolbar.OVAL (1), etc.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setTool-java.lang.String-">setTool(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Switches to the specified tool, where 'name' is "rect", "elliptical",
"brush", etc.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#setTransparentColor-java.awt.Color-">setTransparentColor(Color)</a></span> - Method in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">Sets the transparent color used in the COPY_TRANSPARENT
mode (default is Color.white).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteBlitter.html#setTransparentColor-java.awt.Color-">setTransparentColor(Color)</a></span> - Method in class ij.process.<a href="ij/process/ByteBlitter.html" title="class in ij.process">ByteBlitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorBlitter.html#setTransparentColor-java.awt.Color-">setTransparentColor(Color)</a></span> - Method in class ij.process.<a href="ij/process/ColorBlitter.html" title="class in ij.process">ColorBlitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatBlitter.html#setTransparentColor-java.awt.Color-">setTransparentColor(Color)</a></span> - Method in class ij.process.<a href="ij/process/FloatBlitter.html" title="class in ij.process">FloatBlitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortBlitter.html#setTransparentColor-java.awt.Color-">setTransparentColor(Color)</a></span> - Method in class ij.process.<a href="ij/process/ShortBlitter.html" title="class in ij.process">ShortBlitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#setTransparentIndex-int-">setTransparentIndex(int)</a></span> - Static method in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Sets the transparent index (0-255), or set to -1 to disable transparency.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setType-int-">setType(int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setUnderColor-int-int-int-">setUnderColor(int, int, int)</a></span> - Static method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Set the lower Over/Under thresholding color.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#setUnit-java.lang.String-">setUnit(String)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Sets the default length unit (e.g.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#setUnitIncrement-int-">setUnitIncrement(int)</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#setUnsavedMeasurements-boolean-">setUnsavedMeasurements(boolean)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#setup--">setup()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#setup--">setup()</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/AVI_Writer.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/AVI_Writer.html" title="class in ij.plugin.filter">AVI_Writer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/BackgroundSubtracter.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/BackgroundSubtracter.html" title="class in ij.plugin.filter">BackgroundSubtracter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Benchmark.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Benchmark.html" title="class in ij.plugin.filter">Benchmark</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Binary.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Binary.html" title="class in ij.plugin.filter">Binary</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Calibrator.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Calibrator.html" title="class in ij.plugin.filter">Calibrator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Convolver.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Convolver.html" title="class in ij.plugin.filter">Convolver</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Duplicater.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Duplicater.html" title="class in ij.plugin.filter">Duplicater</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span></div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">Prepare for processing; also called at the very end with argument 'final'
to show any newly created output image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/FFTCustomFilter.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/FFTCustomFilter.html" title="class in ij.plugin.filter">FFTCustomFilter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/FFTFilter.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/FFTFilter.html" title="class in ij.plugin.filter">FFTFilter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Filler.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Filler.html" title="class in ij.plugin.filter">Filler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Filters.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Filters.html" title="class in ij.plugin.filter">Filters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/FractalBoxCounter.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/FractalBoxCounter.html" title="class in ij.plugin.filter">FractalBoxCounter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/GaussianBlur.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/GaussianBlur.html" title="class in ij.plugin.filter">GaussianBlur</a></dt>
<dd>
<div class="block">Method to return types supported</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ImageMath.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ImageMath.html" title="class in ij.plugin.filter">ImageMath</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ImageProperties.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ImageProperties.html" title="class in ij.plugin.filter">ImageProperties</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Info.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Info.html" title="class in ij.plugin.filter">Info</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span></div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/LineGraphAnalyzer.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/LineGraphAnalyzer.html" title="class in ij.plugin.filter">LineGraphAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/LutApplier.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/LutApplier.html" title="class in ij.plugin.filter">LutApplier</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/LutViewer.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/LutViewer.html" title="class in ij.plugin.filter">LutViewer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd>
<div class="block">Method to return types supported</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">This method is called once when the filter is loaded.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Printer.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Printer.html" title="class in ij.plugin.filter">Printer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd>
<div class="block">Setup of the PlugInFilter.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RGBStackSplitter.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/RGBStackSplitter.html" title="class in ij.plugin.filter">RGBStackSplitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RoiWriter.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/RoiWriter.html" title="class in ij.plugin.filter">RoiWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Rotator.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Rotator.html" title="class in ij.plugin.filter">Rotator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/SaltAndPepper.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/SaltAndPepper.html" title="class in ij.plugin.filter">SaltAndPepper</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ScaleDialog.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ScaleDialog.html" title="class in ij.plugin.filter">ScaleDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Shadows.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Shadows.html" title="class in ij.plugin.filter">Shadows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/StackLabeler.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/StackLabeler.html" title="class in ij.plugin.filter">StackLabeler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ThresholdToSelection.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ThresholdToSelection.html" title="class in ij.plugin.filter">ThresholdToSelection</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Transformer.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Transformer.html" title="class in ij.plugin.filter">Transformer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Translator.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Translator.html" title="class in ij.plugin.filter">Translator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/UnsharpMask.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/UnsharpMask.html" title="class in ij.plugin.filter">UnsharpMask</a></dt>
<dd>
<div class="block">Method to return types supported</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Writer.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Writer.html" title="class in ij.plugin.filter">Writer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/XYWriter.html#setup-java.lang.String-ij.ImagePlus-">setup(String, ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/XYWriter.html" title="class in ij.plugin.filter">XYWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Undo.html#setup-int-ij.ImagePlus-">setup(int, ImagePlus)</a></span> - Static method in class ij.<a href="ij/Undo.html" title="class in ij">Undo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SETUP_UNDO">SETUP_UNDO</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#setupDialog-ij.ImagePlus-int-">setupDialog(ImagePlus, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Displays a "Process all images?" dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#setupScroll-int-int-">setupScroll(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#setupScroll-int-int-">setupScroll(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">overrides ImageCanvas.setupScroll; if plot is not frozen, scrolling modifies the plot data range</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setUseBicubic-boolean-">setUseBicubic(boolean)</a></span> - Static method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ContrastEnhancer.html#setUseStackHistogram-boolean-">setUseStackHistogram(boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ContrastEnhancer.html" title="class in ij.plugin">ContrastEnhancer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#setValue-int-">setValue(int)</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#setValue-java.lang.String-int-double-">setValue(String, int, double)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Sets the value of the given column and row, where
where 0<=row<counter.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#setValue-int-int-double-">setValue(int, int, double)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Sets the value of the given column and row, where
where 0<=column<=(lastRow+1 and 0<=row<=counter.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#setValue-java.lang.String-int-java.lang.String-">setValue(String, int, String)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Sets the string value of the given column and row, where
where 0<=row<counter.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#setValue-int-int-java.lang.String-">setValue(int, int, String)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Sets the string value of the given column and row, where
where 0<=column<=(lastRow+1 and 0<=row<=counter.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#setValue-double-">setValue(double)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Sets the default fill/draw value, where 0<=value<=255.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setValue-double-">setValue(double)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Sets the default fill/draw value, where <code>value</code> is interpreted as an RGB int.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#setValue-double-">setValue(double)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Sets the default fill/draw value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#setValue-double-">setValue(double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets the default fill/draw value.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#setValue-double-">setValue(double)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Sets the default fill/draw value, where 0<=value<=65535).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#setValueUnit-java.lang.String-">setValueUnit(String)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Sets the value unit.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#setVariable-java.lang.String-double-">setVariable(String, double)</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#setVisibleAmount-int-">setVisibleAmount(int)</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#setVoxel-int-int-int-double-">setVoxel(int, int, int, double)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#setVoxels-int-int-int-int-int-int-float:A-">setVoxels(int, int, int, int, int, int, float[])</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Experimental</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#setVoxels-int-int-int-int-int-int-float:A-int-">setVoxels(int, int, int, int, int, int, float[], int)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Experimental</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#setWeightingFactors-double-double-double-">setWeightingFactors(double, double, double)</a></span> - Static method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Sets the weighting factors used by getPixelValue(), getHistogram()
and convertToByte() to do color conversions.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#setWidth-int-">setWidth(int)</a></span> - Static method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/WildcardMatch.html#setWildcardChars-char-char-">setWildcardChars(char, char)</a></span> - Method in class ij.util.<a href="ij/util/WildcardMatch.html" title="class in ij.util">WildcardMatch</a></dt>
<dd>
<div class="block">Sets new characters to be used as wildcard characters, overriding the
the default of '?' for any single character match and '*' for any
amount of characters, including 0 characters.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setWindow-ij.gui.ImageWindow-">setWindow(ImageWindow)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">This method should only be called from an ImageWindow.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#setWindow-java.awt.Window-">setWindow(Window)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">The specified Window becomes the front window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#setWindow-java.awt.Frame-">setWindow(Frame)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd>
<div class="block">The specified frame becomes the front window, the one returnd by getFrontWindow().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setXLabelFont-java.awt.Font-">setXLabelFont(Font)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the xLabelFont; must not be mull.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setXMinorTicks-boolean-">setXMinorTicks(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets whether to show minor ticks on the x axis (if linear).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setXTicks-boolean-">setXTicks(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets whether to show major ticks at the x axis.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#setXUnit-java.lang.String-">setXUnit(String)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Sets the X length unit.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setXYLabels-java.lang.String-java.lang.String-">setXYLabels(String, String)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the labels of the x and y axes.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setYLabelFont-java.awt.Font-">setYLabelFont(Font)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets the yLabelFont; must not be null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setYMinorTicks-boolean-">setYMinorTicks(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets whether to show minor ticks on the y axis (if linear).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#setYTicks-boolean-">setYTicks(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Sets whether to show major ticks at the y axis.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#setYUnit-java.lang.String-">setYUnit(String)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Sets the Y length unit.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#setZ-int-">setZ(int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Sets the hyperstack slice position (one based).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#setZ-ij.gui.ImageWindow-int-">setZ(ImageWindow, int)</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageRoi.html#setZeroTransparent-boolean-">setZeroTransparent(boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageRoi.html" title="class in ij.gui">ImageRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#setZUnit-java.lang.String-">setZUnit(String)</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Sets the Z length unit.</div>
</dd>
<dt><a href="ij/plugin/filter/Shadows.html" title="class in ij.plugin.filter"><span class="typeNameLink">Shadows</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">Implements the commands in the Process/Shadows submenu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Shadows.html#Shadows--">Shadows()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Shadows.html" title="class in ij.plugin.filter">Shadows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#SHAPE_DESCRIPTORS">SHAPE_DESCRIPTORS</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#SHAPE_ROI_SIZE">SHAPE_ROI_SIZE</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><a href="ij/gui/ShapeRoi.html" title="class in ij.gui"><span class="typeNameLink">ShapeRoi</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">A subclass of <code>ij.gui.Roi</code> (2D Regions Of Interest) implemented in terms of java.awt.Shape.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#ShapeRoi-ij.gui.Roi-">ShapeRoi(Roi)</a></span> - Constructor for class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Constructs a ShapeRoi from an Roi.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#ShapeRoi-java.awt.Shape-">ShapeRoi(Shape)</a></span> - Constructor for class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Constructs a ShapeRoi from a Shape.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#ShapeRoi-int-int-java.awt.Shape-">ShapeRoi(int, int, Shape)</a></span> - Constructor for class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Constructs a ShapeRoi from a Shape.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#ShapeRoi-float:A-">ShapeRoi(float[])</a></span> - Constructor for class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Constructs a ShapeRoi from an array of variable length path segments.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#shapeToRoi--">shapeToRoi()</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Attempts to convert this ShapeRoi into a non-composite Roi.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#sharpen--">sharpen()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sharpens the image or ROI using a 3x3 convolution kernel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/UnsharpMask.html#sharpenFloat-ij.process.FloatProcessor-double-float-">sharpenFloat(FloatProcessor, double, float)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/UnsharpMask.html" title="class in ij.plugin.filter">UnsharpMask</a></dt>
<dd>
<div class="block">Unsharp Mask filtering of a float image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SHIFT_LEFT">SHIFT_LEFT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SHIFT_RIGHT">SHIFT_RIGHT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#shiftKeyDown--">shiftKeyDown()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if the shift key is down.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#SHORT">SHORT</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">Output type: new 16-bit image</div>
</dd>
<dt><a href="ij/process/ShortBlitter.html" title="class in ij.process"><span class="typeNameLink">ShortBlitter</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This class does bit blitting of 16-bit images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortBlitter.html#ShortBlitter-ij.process.ShortProcessor-">ShortBlitter(ShortProcessor)</a></span> - Constructor for class ij.process.<a href="ij/process/ShortBlitter.html" title="class in ij.process">ShortBlitter</a></dt>
<dd>
<div class="block">Constructs a ShortBlitter from a ShortProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#SHORTCUT_IN_USE">SHORTCUT_IN_USE</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#shortcutInUse-java.lang.String-">shortcutInUse(String)</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Returns 'true' if this keyboard shortcut is in use.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#SHORTCUTS_MENU">SHORTCUTS_MENU</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><a href="ij/process/ShortProcessor.html" title="class in ij.process"><span class="typeNameLink">ShortProcessor</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">ShortProcessors contain a 16-bit unsigned image
and methods that operate on that image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#ShortProcessor-int-int-short:A-java.awt.image.ColorModel-">ShortProcessor(int, int, short[], ColorModel)</a></span> - Constructor for class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Creates a new ShortProcessor using the specified pixel array and ColorModel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#ShortProcessor-int-int-">ShortProcessor(int, int)</a></span> - Constructor for class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Creates a blank ShortProcessor using the default grayscale LUT that
displays zero as black.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#ShortProcessor-java.awt.image.BufferedImage-">ShortProcessor(BufferedImage)</a></span> - Constructor for class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Creates a ShortProcessor from a TYPE_USHORT_GRAY BufferedImage.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#ShortProcessor-int-int-short:A-java.awt.image.ColorModel-boolean-">ShortProcessor(int, int, short[], ColorModel, boolean)</a></span> - Constructor for class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">16 bit images are normally unsigned but signed images can be simulated by
subtracting 32768 and using a calibration function to restore the original values.</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#ShortProcessor-int-int-boolean-">ShortProcessor(int, int, boolean)</a></span> - Constructor for class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Obsolete.</div>
</dd>
<dt><a href="ij/process/ShortStatistics.html" title="class in ij.process"><span class="typeNameLink">ShortStatistics</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">16-bit image statistics, including histogram.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortStatistics.html#ShortStatistics-ij.process.ImageProcessor-">ShortStatistics(ImageProcessor)</a></span> - Constructor for class ij.process.<a href="ij/process/ShortStatistics.html" title="class in ij.process">ShortStatistics</a></dt>
<dd>
<div class="block">Construct an ImageStatistics object from a ShortProcessor
using the standard measurement options (area, mean,
mode, min and max).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortStatistics.html#ShortStatistics-ij.process.ImageProcessor-int-ij.measure.Calibration-">ShortStatistics(ImageProcessor, int, Calibration)</a></span> - Constructor for class ij.process.<a href="ij/process/ShortStatistics.html" title="class in ij.process">ShortStatistics</a></dt>
<dd>
<div class="block">Constructs a ShortStatistics object from a ShortProcessor using
the specified measurement options.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#show--">show()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Displays the plot in a PlotWindow and returns a reference to the PlotWindow.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProgressBar.html#show-double-">show(double)</a></span> - Method in class ij.gui.<a href="ij/gui/ProgressBar.html" title="class in ij.gui">ProgressBar</a></dt>
<dd>
<div class="block">Updates the progress bar, where abs(progress) should run from 0 to 1.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProgressBar.html#show-double-boolean-">show(double, boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/ProgressBar.html" title="class in ij.gui">ProgressBar</a></dt>
<dd>
<div class="block">Updates the progress bar, where abs(progress) should run from 0 to 1.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProgressBar.html#show-int-int-">show(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/ProgressBar.html" title="class in ij.gui">ProgressBar</a></dt>
<dd>
<div class="block">Updates the progress bar, where the length of the bar is set to
(<code>(abs(currentIndex)+1)/abs(finalIndex)</code> of the maximum bar
length.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/WaitForUserDialog.html#show--">show()</a></span> - Method in class ij.gui.<a href="ij/gui/WaitForUserDialog.html" title="class in ij.gui">WaitForUserDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#show--">show()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Opens a window to display this image and clears the status bar.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#show-java.lang.String-">show(String)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Opens a window to display this image and displays
'statusMessage' in the status bar.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#show-java.lang.String-">show(String)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Displays the contents of this ResultsTable in a window with
the specified title, or updates an existing results window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#SHOW_ALL_COLOR">SHOW_ALL_COLOR</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#SHOW_MASKS">SHOW_MASKS</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Display image containing binary masks of measured particles.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SHOW_MESSAGE">SHOW_MESSAGE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SHOW_MESSAGE_WITH_CANCEL">SHOW_MESSAGE_WITH_CANCEL</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#SHOW_NONE">SHOW_NONE</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Do not display particle outline image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#SHOW_OUTLINES">SHOW_OUTLINES</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Display image containing outlines of measured particles.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#SHOW_OVERLAY_MASKS">SHOW_OVERLAY_MASKS</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Display filled particle as an overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#SHOW_OVERLAY_OUTLINES">SHOW_OVERLAY_OUTLINES</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Display particle outlines as an overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SHOW_PROGRESS">SHOW_PROGRESS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#SHOW_PROGRESS">SHOW_PROGRESS</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Display a progress bar.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#SHOW_RESULTS">SHOW_RESULTS</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Display results in the ImageJ console.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#SHOW_ROI_MASKS">SHOW_ROI_MASKS</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Display image containing grayscales masks that identify measured particles.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SHOW_STATUS">SHOW_STATUS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#SHOW_SUMMARY">SHOW_SUMMARY</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Obsolete, replaced by DISPLAY_SUMMARY</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SHOW_TEXT">SHOW_TEXT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#showAllPoints">showAllPoints</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Ignore stack positions when displaying points.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#showAllSliceOnly">showAllSliceOnly</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Only show ROIs associated with current slice in Roi Manager "Show All" mode.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#showArrayInspector-int-">showArrayInspector(int)</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd>
<div class="block">Shows array elements after clicking an array variable in Debug
window
N.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GUI.html#showCompositeAdvisory-ij.ImagePlus-java.lang.String-">showCompositeAdvisory(ImagePlus, String)</a></span> - Static method in class ij.gui.<a href="ij/gui/GUI.html" title="class in ij.gui">GUI</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#showDialog--">showDialog()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Displays this dialog box.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/NonBlockingGenericDialog.html#showDialog--">showDialog()</a></span> - Method in class ij.gui.<a href="ij/gui/NonBlockingGenericDialog.html" title="class in ij.gui">NonBlockingGenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotContentsStyleDialog.html#showDialog-java.awt.Frame-">showDialog(Frame)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotContentsStyleDialog.html" title="class in ij.gui">PlotContentsStyleDialog</a></dt>
<dd>
<div class="block">Shows the dialog, with a given parent Frame</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotDialog.html#showDialog-java.awt.Frame-">showDialog(Frame)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotDialog.html" title="class in ij.gui">PlotDialog</a></dt>
<dd>
<div class="block">Asks the user for axis scaling; then replot with new scale on the same ImageProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/RoiProperties.html#showDialog--">showDialog()</a></span> - Method in class ij.gui.<a href="ij/gui/RoiProperties.html" title="class in ij.gui">RoiProperties</a></dt>
<dd>
<div class="block">Displays the dialog box and returns 'false' if the user cancels it.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Compiler.html#showDialog--">showDialog()</a></span> - Method in class ij.plugin.<a href="ij/plugin/Compiler.html" title="class in ij.plugin">Compiler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FFTMath.html#showDialog--">showDialog()</a></span> - Method in class ij.plugin.<a href="ij/plugin/FFTMath.html" title="class in ij.plugin">FFTMath</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/BackgroundSubtracter.html#showDialog-ij.ImagePlus-java.lang.String-ij.plugin.filter.PlugInFilterRunner-">showDialog(ImagePlus, String, PlugInFilterRunner)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/BackgroundSubtracter.html" title="class in ij.plugin.filter">BackgroundSubtracter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Binary.html#showDialog-ij.ImagePlus-java.lang.String-ij.plugin.filter.PlugInFilterRunner-">showDialog(ImagePlus, String, PlugInFilterRunner)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Binary.html" title="class in ij.plugin.filter">Binary</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Calibrator.html#showDialog-ij.ImagePlus-">showDialog(ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Calibrator.html" title="class in ij.plugin.filter">Calibrator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Convolver.html#showDialog-ij.ImagePlus-java.lang.String-ij.plugin.filter.PlugInFilterRunner-">showDialog(ImagePlus, String, PlugInFilterRunner)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Convolver.html" title="class in ij.plugin.filter">Convolver</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#showDialog-ij.ImagePlus-java.lang.String-ij.plugin.filter.PlugInFilterRunner-">showDialog(ImagePlus, String, PlugInFilterRunner)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">Called by the PlugInFilterRunner after setup.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ExtendedPlugInFilter.html#showDialog-ij.ImagePlus-java.lang.String-ij.plugin.filter.PlugInFilterRunner-">showDialog(ImagePlus, String, PlugInFilterRunner)</a></span> - Method in interface ij.plugin.filter.<a href="ij/plugin/filter/ExtendedPlugInFilter.html" title="interface in ij.plugin.filter">ExtendedPlugInFilter</a></dt>
<dd>
<div class="block">This method is called after <code>setup(arg, imp)</code> unless the
<code>DONE</code> flag has been set.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/GaussianBlur.html#showDialog-ij.ImagePlus-java.lang.String-ij.plugin.filter.PlugInFilterRunner-">showDialog(ImagePlus, String, PlugInFilterRunner)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/GaussianBlur.html" title="class in ij.plugin.filter">GaussianBlur</a></dt>
<dd>
<div class="block">Ask the user for the parameters</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ImageMath.html#showDialog-ij.ImagePlus-java.lang.String-ij.plugin.filter.PlugInFilterRunner-">showDialog(ImagePlus, String, PlugInFilterRunner)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ImageMath.html" title="class in ij.plugin.filter">ImageMath</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#showDialog-ij.ImagePlus-java.lang.String-ij.plugin.filter.PlugInFilterRunner-">showDialog(ImagePlus, String, PlugInFilterRunner)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#showDialog--">showDialog()</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd>
<div class="block">Displays a modal options dialog.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#showDialog-ij.ImagePlus-java.lang.String-ij.plugin.filter.PlugInFilterRunner-">showDialog(ImagePlus, String, PlugInFilterRunner)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Rotator.html#showDialog-ij.ImagePlus-java.lang.String-ij.plugin.filter.PlugInFilterRunner-">showDialog(ImagePlus, String, PlugInFilterRunner)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Rotator.html" title="class in ij.plugin.filter">Rotator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/StackLabeler.html#showDialog-ij.ImagePlus-java.lang.String-ij.plugin.filter.PlugInFilterRunner-">showDialog(ImagePlus, String, PlugInFilterRunner)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/StackLabeler.html" title="class in ij.plugin.filter">StackLabeler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Translator.html#showDialog-ij.ImagePlus-java.lang.String-ij.plugin.filter.PlugInFilterRunner-">showDialog(ImagePlus, String, PlugInFilterRunner)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Translator.html" title="class in ij.plugin.filter">Translator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/UnsharpMask.html#showDialog-ij.ImagePlus-java.lang.String-ij.plugin.filter.PlugInFilterRunner-">showDialog(ImagePlus, String, PlugInFilterRunner)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/UnsharpMask.html" title="class in ij.plugin.filter">UnsharpMask</a></dt>
<dd>
<div class="block">Ask the user for the parameters</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NewPlugin.html#showDialog--">showDialog()</a></span> - Method in class ij.plugin.<a href="ij/plugin/NewPlugin.html" title="class in ij.plugin">NewPlugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/OverlayLabels.html#showDialog--">showDialog()</a></span> - Method in class ij.plugin.<a href="ij/plugin/OverlayLabels.html" title="class in ij.plugin">OverlayLabels</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiEnlarger.html#showDialog-ij.ImagePlus-double-">showDialog(ImagePlus, double)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RoiEnlarger.html" title="class in ij.plugin">RoiEnlarger</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiRotator.html#showDialog-double-">showDialog(double)</a></span> - Method in class ij.plugin.<a href="ij/plugin/RoiRotator.html" title="class in ij.plugin">RoiRotator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/RoiScaler.html#showDialog--">showDialog()</a></span> - Method in class ij.plugin.<a href="ij/plugin/RoiScaler.html" title="class in ij.plugin">RoiScaler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackReducer.html#showDialog-ij.ImageStack-">showDialog(ImageStack)</a></span> - Method in class ij.plugin.<a href="ij/plugin/StackReducer.html" title="class in ij.plugin">StackReducer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#showHistogram-ij.ImagePlus-int-">showHistogram(ImagePlus, int)</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd>
<div class="block">Draws the histogram using the specified title and number of bins.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#showHistogram-ij.ImagePlus-int-double-double-">showHistogram(ImagePlus, int, double, double)</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd>
<div class="block">Draws the histogram using the specified title, number of bins and histogram range.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#showHistogram-ij.ImagePlus-ij.process.ImageStatistics-">showHistogram(ImagePlus, ImageStatistics)</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd>
<div class="block">Draws the histogram using the specified title and ImageStatistics.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/RoiProperties.html#showImageDialog-java.lang.String-">showImageDialog(String)</a></span> - Method in class ij.gui.<a href="ij/gui/RoiProperties.html" title="class in ij.gui">RoiProperties</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#showList--">showList()</a></span> - Method in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#showLogWindow--">showLogWindow()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#showMacroFunctions--">showMacroFunctions()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#showMessage-java.lang.String-">showMessage(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Displays a message in a dialog box titled "Message".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#showMessage-java.lang.String-java.lang.String-">showMessage(String, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Displays a message in a dialog box with the specified title.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#showMessageWithCancel-java.lang.String-java.lang.String-">showMessageWithCancel(String, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Displays a message in a dialog box with the specified title.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/ArrowTool.html#showOptionsDialog--">showOptionsDialog()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/ArrowTool.html" title="class in ij.plugin.tool">ArrowTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/BrushTool.html#showOptionsDialog--">showOptionsDialog()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/BrushTool.html" title="class in ij.plugin.tool">BrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/OverlayBrushTool.html#showOptionsDialog--">showOptionsDialog()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/OverlayBrushTool.html" title="class in ij.plugin.tool">OverlayBrushTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PixelInspectionTool.html#showOptionsDialog--">showOptionsDialog()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PixelInspectionTool.html" title="class in ij.plugin.tool">PixelInspectionTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PlugInTool.html#showOptionsDialog--">showOptionsDialog()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool">PlugInTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/RoiRotationTool.html#showOptionsDialog--">showOptionsDialog()</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/RoiRotationTool.html" title="class in ij.plugin.tool">RoiRotationTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/tool/PlugInTool.html#showPopupMenu-java.awt.event.MouseEvent-ij.gui.Toolbar-">showPopupMenu(MouseEvent, Toolbar)</a></span> - Method in class ij.plugin.tool.<a href="ij/plugin/tool/PlugInTool.html" title="class in ij.plugin.tool">PlugInTool</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#showProgress-double-">showProgress(double)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Updates the progress bar, where 0<=progress<=1.0.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#showProgress-int-int-">showProgress(int, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Updates the progress bar, where the length of the bar is set to
(<code>currentValue+1)/finalValue</code> of the maximum bar length.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/GaussianBlur.html#showProgress-boolean-">showProgress(boolean)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/GaussianBlur.html" title="class in ij.plugin.filter">GaussianBlur</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#showProgress">showProgress</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#showProgress-double-">showProgress(double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#showResults">showResults</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#showRowNumbers-boolean-">showRowNumbers(boolean)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#showSizeDistribution">showSizeDistribution</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#showSlice-int-">showSlice(int)</a></span> - Method in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd>
<div class="block">Displays the specified slice and updates the stack scrollbar.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#showStatus--">showStatus()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#showStatus-java.lang.String-">showStatus(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Displays a message in the ImageJ status bar.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ThresholdToSelection.html#showStatus-boolean-">showStatus(boolean)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ThresholdToSelection.html" title="class in ij.plugin.filter">ThresholdToSelection</a></dt>
<dd>
<div class="block">Determines whether to show status messages and a progress bar</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#showTime-ij.ImagePlus-long-java.lang.String-">showTime(ImagePlus, long, String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#showTime-ij.ImagePlus-long-java.lang.String-int-">showTime(ImagePlus, long, String, int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Binner.html#shrink-ij.ImagePlus-int-int-int-int-">shrink(ImagePlus, int, int, int, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Binner.html" title="class in ij.plugin">Binner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Binner.html#shrink-ij.process.ImageProcessor-int-int-int-">shrink(ImageProcessor, int, int, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Binner.html" title="class in ij.plugin">Binner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Binner.html#shrinkHyperstackZ-ij.ImagePlus-int-">shrinkHyperstackZ(ImagePlus, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Binner.html" title="class in ij.plugin">Binner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackConverter.html#shuffle-ij.ImagePlus-int-">shuffle(ImagePlus, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/HyperStackConverter.html" title="class in ij.plugin">HyperStackConverter</a></dt>
<dd>
<div class="block">Changes the dimension order of a 4D or 5D stack from
the specified order (CTZ, ZCT, ZTC, TCZ or TZC) to
the XYCZT order used by ImageJ.</div>
</dd>
<dt><a href="ij/plugin/SimpleCommands.html" title="class in ij.plugin"><span class="typeNameLink">SimpleCommands</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Plugins/Utilities/Unlock, Image/Rename
and Plugins/Utilities/Search commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/SimpleCommands.html#SimpleCommands--">SimpleCommands()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/SimpleCommands.html" title="class in ij.plugin">SimpleCommands</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SIN">SIN</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/MaximumFinder.html#SINGLE_POINTS">SINGLE_POINTS</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/MaximumFinder.html" title="class in ij.plugin.filter">MaximumFinder</a></dt>
<dd>
<div class="block">Output type single points</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ContrastAdjuster.html#sixteenBitRanges">sixteenBitRanges</a></span> - Static variable in class ij.plugin.frame.<a href="ij/plugin/frame/ContrastAdjuster.html" title="class in ij.plugin.frame">ContrastAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#size--">size()</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Returns the number of ROIs in this Overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#size--">size()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Returns the number of slices in this stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#size--">size()</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Returns the size of this ResultsTable.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#SIZE_KEY">SIZE_KEY</a></span> - Static variable in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#sizes">sizes</a></span> - Static variable in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/BinaryProcessor.html#skeletonize--">skeletonize()</a></span> - Method in class ij.process.<a href="ij/process/BinaryProcessor.html" title="class in ij.process">BinaryProcessor</a></dt>
<dd>
<div class="block">Uses a lookup table to repeatably removes pixels from the
edges of objects in a binary image, reducing them to single
pixel wide skeletons.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#skeletonize--">skeletonize()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#SKEWNESS">SKEWNESS</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#SKEWNESS">SKEWNESS</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#skewness">skewness</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#skipRawDialog">skipRawDialog</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Do not display dialog when opening .raw files</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#slice">slice</a></span> - Variable in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#SLICE">SLICE</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#SLICE">SLICE</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#slice">slice</a></span> - Variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#sliceLabels">sliceLabels</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Slicer.html" title="class in ij.plugin"><span class="typeNameLink">Slicer</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Implements the Image/Stacks/Reslice command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Slicer.html#Slicer--">Slicer()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Slicer.html" title="class in ij.plugin">Slicer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#sliceSelector">sliceSelector</a></span> - Variable in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#slider">slider</a></span> - Variable in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#smooth--">smooth()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Replaces each pixel with the 3x3 neighborhood mean.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#smoothWand">smoothWand</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Wand tool "Smooth if thresholded" option</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SNAPSHOT">SNAPSHOT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#SNAPSHOT">SNAPSHOT</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the filter requires a snapshot (copy of the pixels array).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#snapshot--">snapshot()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Make a snapshot of the current image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#snapshot--">snapshot()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#snapshot--">snapshot()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#snapshot--">snapshot()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Makes a copy of this image's pixel data that can be
later restored using reset() or reset(mask).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#snapshot--">snapshot()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#snapshotHeight">snapshotHeight</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#snapshotPixels">snapshotPixels</a></span> - Variable in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#snapshotPixels">snapshotPixels</a></span> - Variable in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#snapshotWidth">snapshotWidth</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#SOFTWARE">SOFTWARE</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#SOLIDITY">SOLIDITY</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/ArrayUtil.html#sort--">sort()</a></span> - Method in class ij.util.<a href="ij/util/ArrayUtil.html" title="class in ij.util">ArrayUtil</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/DicomTools.html#sort-ij.ImageStack-">sort(ImageStack)</a></span> - Static method in class ij.util.<a href="ij/util/DicomTools.html" title="class in ij.util">DicomTools</a></dt>
<dd>
<div class="block">Sorts a DICOM stack by image number.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/StringSorter.html#sort-java.lang.String:A-">sort(String[])</a></span> - Static method in class ij.util.<a href="ij/util/StringSorter.html" title="class in ij.util">StringSorter</a></dt>
<dd>
<div class="block">Sorts the array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#sortDicom-java.lang.String:A-java.lang.String:A-int-">sortDicom(String[], String[], int)</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#sortedTypes">sortedTypes</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Nicer sequence of the built-in function types</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FolderOpener.html#sortFileList-java.lang.String:A-">sortFileList(String[])</a></span> - Method in class ij.plugin.<a href="ij/plugin/FolderOpener.html" title="class in ij.plugin">FolderOpener</a></dt>
<dd>
<div class="block">Sorts file names containing numerical components.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FolderOpener.html#sortFileNames-boolean-">sortFileNames(boolean)</a></span> - Method in class ij.plugin.<a href="ij/plugin/FolderOpener.html" title="class in ij.plugin">FolderOpener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/StringSorter.html#sortNumerically-java.lang.String:A-">sortNumerically(String[])</a></span> - Static method in class ij.util.<a href="ij/util/StringSorter.html" title="class in ij.util">StringSorter</a></dt>
<dd>
<div class="block">Sorts file names containing numerical components.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#source">source</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Shadows.html#south-ij.process.ImageProcessor-">south(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Shadows.html" title="class in ij.plugin.filter">Shadows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Shadows.html#southeast-ij.process.ImageProcessor-">southeast(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Shadows.html" title="class in ij.plugin.filter">Shadows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Shadows.html#southwest-ij.process.ImageProcessor-">southwest(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Shadows.html" title="class in ij.plugin.filter">Shadows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#spaceBarDown--">spaceBarDown()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Returns true if the space bar is down.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#SPARE1">SPARE1</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Obsolete public constants</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#SPARE2">SPARE2</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Obsolete public constants</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#SPARE3">SPARE3</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Obsolete public constants</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#SPARE4">SPARE4</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Obsolete public constants</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#SPARE5">SPARE5</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Obsolete public constants</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#SPARE6">SPARE6</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Obsolete public constants</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#SPARE7">SPARE7</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Obsolete public constants</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#SPARE8">SPARE8</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Obsolete public constants</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#SPARE9">SPARE9</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd>
<div class="block">Obsolete public constants</div>
</dd>
<dt><a href="ij/plugin/SpecifyROI.html" title="class in ij.plugin"><span class="typeNameLink">SpecifyROI</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Edit/Selection/Specify command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/SpecifyROI.html#SpecifyROI--">SpecifyROI()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/SpecifyROI.html" title="class in ij.plugin">SpecifyROI</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#SPLINE_FIT">SPLINE_FIT</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#splineFitLines">splineFitLines</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Automatically spline fit line selections</div>
</dd>
<dt><a href="ij/measure/SplineFitter.html" title="class in ij.measure"><span class="typeNameLink">SplineFitter</span></a> - Class in <a href="ij/measure/package-summary.html">ij.measure</a></dt>
<dd>
<div class="block">This class fits a spline function to a set of points.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/SplineFitter.html#SplineFitter-int:A-int:A-int-">SplineFitter(int[], int[], int)</a></span> - Constructor for class ij.measure.<a href="ij/measure/SplineFitter.html" title="class in ij.measure">SplineFitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/SplineFitter.html#SplineFitter-float:A-float:A-int-boolean-">SplineFitter(float[], float[], int, boolean)</a></span> - Constructor for class ij.measure.<a href="ij/measure/SplineFitter.html" title="class in ij.measure">SplineFitter</a></dt>
<dd>
<div class="block">For closed curves: the first and last y value should be identical;
internally, a periodic continuation with a few will be used at both
ends</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/SplineFitter.html#SplineFitter-float:A-float:A-int-">SplineFitter(float[], float[], int)</a></span> - Constructor for class ij.measure.<a href="ij/measure/SplineFitter.html" title="class in ij.measure">SplineFitter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#splinePoints">splinePoints</a></span> - Variable in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SPLIT">SPLIT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ChannelSplitter.html#split-ij.ImagePlus-">split(ImagePlus)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/ChannelSplitter.html" title="class in ij.plugin">ChannelSplitter</a></dt>
<dd>
<div class="block">Splits the specified image into separate channels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RGBStackSplitter.html#split-ij.ImagePlus-">split(ImagePlus)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/RGBStackSplitter.html" title="class in ij.plugin.filter">RGBStackSplitter</a></dt>
<dd>
<div class="block">Deprecated; replaced by ij.plugin.ChannelSplitter.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RGBStackSplitter.html#split-ij.ImageStack-boolean-">split(ImageStack, boolean)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/RGBStackSplitter.html" title="class in ij.plugin.filter">RGBStackSplitter</a></dt>
<dd>
<div class="block">Deprecated; replaced by ChannelSplitter.splitRGB().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#split-java.lang.String-">split(String)</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd>
<div class="block">Splits a string into substrings using the default delimiter set,
which is " \t\n\r" (space, tab, newline and carriage-return).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#split-java.lang.String-java.lang.String-">split(String, String)</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd>
<div class="block">Splits a string into substring using the characters
contained in the second argument as the delimiter set.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ChannelSplitter.html#splitRGB-ij.ImageStack-boolean-">splitRGB(ImageStack, boolean)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/ChannelSplitter.html" title="class in ij.plugin">ChannelSplitter</a></dt>
<dd>
<div class="block">Splits the specified RGB stack into three 8-bit grayscale stacks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#sqr--">sqr()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#sqr--">sqr()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Performs a square transform on the image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#sqr--">sqr()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SQRT">SQRT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#sqrt--">sqrt()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#sqrt--">sqrt()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Performs a square root transform on the image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#sqrt--">sqrt()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#SQRT2">SQRT2</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">In old make16bitEDM this pixel value corresponds to a pixel distance of sqrt(2)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#SQRT5">SQRT5</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">In old make16bitEDM this pixel value corresponds to a pixel distance of sqrt(5)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/DownsizeTable.html#srcEnd">srcEnd</a></span> - Variable in class ij.process.<a href="ij/process/DownsizeTable.html" title="class in ij.process">DownsizeTable</a></dt>
<dd>
<div class="block">index of the last point of the source data that should be accessed</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#srcRect">srcRect</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/DownsizeTable.html#srcStart">srcStart</a></span> - Variable in class ij.process.<a href="ij/process/DownsizeTable.html" title="class in ij.process">DownsizeTable</a></dt>
<dd>
<div class="block">index of the first point of the source data that should be accessed</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#STACK">STACK</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#STACK_POSITION">STACK_POSITION</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#STACK_REQUIRED">STACK_REQUIRED</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the filter requires a stack.</div>
</dd>
<dt><a href="ij/plugin/Stack_Statistics.html" title="class in ij.plugin"><span class="typeNameLink">Stack_Statistics</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Image/Stacks/Statistics command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Stack_Statistics.html#Stack_Statistics--">Stack_Statistics()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Stack_Statistics.html" title="class in ij.plugin">Stack_Statistics</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/StackCombiner.html" title="class in ij.plugin"><span class="typeNameLink">StackCombiner</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Image/Stacks/Combine command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackCombiner.html#StackCombiner--">StackCombiner()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/StackCombiner.html" title="class in ij.plugin">StackCombiner</a></dt>
<dd> </dd>
<dt><a href="ij/process/StackConverter.html" title="class in ij.process"><span class="typeNameLink">StackConverter</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This class does stack type conversions.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackConverter.html#StackConverter-ij.ImagePlus-">StackConverter(ImagePlus)</a></span> - Constructor for class ij.process.<a href="ij/process/StackConverter.html" title="class in ij.process">StackConverter</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/StackEditor.html" title="class in ij.plugin"><span class="typeNameLink">StackEditor</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Implements the AddSlice, DeleteSlice and "Stack to Images" commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackEditor.html#StackEditor--">StackEditor()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/StackEditor.html" title="class in ij.plugin">StackEditor</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/StackInserter.html" title="class in ij.plugin"><span class="typeNameLink">StackInserter</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin, which implements the Image/Stacks/Tools/Insert
command, inserts an image or stack into another image or stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackInserter.html#StackInserter--">StackInserter()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/StackInserter.html" title="class in ij.plugin">StackInserter</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/StackLabeler.html" title="class in ij.plugin.filter"><span class="typeNameLink">StackLabeler</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This plugin implements the Image/Stacks/Label command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/StackLabeler.html#StackLabeler--">StackLabeler()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/StackLabeler.html" title="class in ij.plugin.filter">StackLabeler</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/StackMaker.html" title="class in ij.plugin"><span class="typeNameLink">StackMaker</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">The plugin implements the Image/Stacks/Tools/Montage to Stack command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackMaker.html#StackMaker--">StackMaker()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/StackMaker.html" title="class in ij.plugin">StackMaker</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/StackPlotter.html" title="class in ij.plugin"><span class="typeNameLink">StackPlotter</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackPlotter.html#StackPlotter--">StackPlotter()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/StackPlotter.html" title="class in ij.plugin">StackPlotter</a></dt>
<dd> </dd>
<dt><a href="ij/process/StackProcessor.html" title="class in ij.process"><span class="typeNameLink">StackProcessor</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This class processes stacks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#StackProcessor-ij.ImageStack-">StackProcessor(ImageStack)</a></span> - Constructor for class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd>
<div class="block">Constructs a StackProcessor from a stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackProcessor.html#StackProcessor-ij.ImageStack-ij.process.ImageProcessor-">StackProcessor(ImageStack, ImageProcessor)</a></span> - Constructor for class ij.process.<a href="ij/process/StackProcessor.html" title="class in ij.process">StackProcessor</a></dt>
<dd>
<div class="block">Constructs a StackProcessor from a stack.</div>
</dd>
<dt><a href="ij/plugin/StackReducer.html" title="class in ij.plugin"><span class="typeNameLink">StackReducer</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Image/Stacks/Tools/Reduce command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackReducer.html#StackReducer--">StackReducer()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/StackReducer.html" title="class in ij.plugin">StackReducer</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/StackReverser.html" title="class in ij.plugin"><span class="typeNameLink">StackReverser</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Image/Transform/Flip Z and
Image/Stacks/Tools/Reverse commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackReverser.html#StackReverser--">StackReverser()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/StackReverser.html" title="class in ij.plugin">StackReverser</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#stackStatistics">stackStatistics</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Used by HistogramWindow</div>
</dd>
<dt><a href="ij/process/StackStatistics.html" title="class in ij.process"><span class="typeNameLink">StackStatistics</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">Statistics, including the histogram, of a stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackStatistics.html#StackStatistics-ij.ImagePlus-">StackStatistics(ImagePlus)</a></span> - Constructor for class ij.process.<a href="ij/process/StackStatistics.html" title="class in ij.process">StackStatistics</a></dt>
<dd>
<div class="block">Creates a StackStatistics object from a stack, using 256
histogram bins and the entire stack pixel value range.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/StackStatistics.html#StackStatistics-ij.ImagePlus-int-double-double-">StackStatistics(ImagePlus, int, double, double)</a></span> - Constructor for class ij.process.<a href="ij/process/StackStatistics.html" title="class in ij.process">StackStatistics</a></dt>
<dd>
<div class="block">Creates a StackStatistics object from a stack, using the specified
histogram bin count and x-axis range (pixel value tange).</div>
</dd>
<dt><a href="ij/gui/StackWindow.html" title="class in ij.gui"><span class="typeNameLink">StackWindow</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This class is an extended ImageWindow that displays stacks and hyperstacks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#StackWindow-ij.ImagePlus-">StackWindow(ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#StackWindow-ij.ImagePlus-ij.gui.ImageCanvas-">StackWindow(ImagePlus, ImageCanvas)</a></span> - Constructor for class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/StackWriter.html" title="class in ij.plugin"><span class="typeNameLink">StackWriter</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin, which saves the images in a stack as separate files,
implements the File/Save As/Image Sequence command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/StackWriter.html#StackWriter--">StackWriter()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/StackWriter.html" title="class in ij.plugin">StackWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#STANDALONE">STANDALONE</a></span> - Static variable in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Run as normal application.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/ThreadUtil.html#startAndJoin-java.lang.Thread:A-">startAndJoin(Thread[])</a></span> - Static method in class ij.util.<a href="ij/util/ThreadUtil.html" title="class in ij.util">ThreadUtil</a></dt>
<dd>
<div class="block">Start all given threads and wait on each of them until all are done.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#startPaste-ij.ImagePlus-">startPaste(ImagePlus)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#STARTS_WITH">STARTS_WITH</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/OtherInstance.html#startServer--">startServer()</a></span> - Static method in class ij.<a href="ij/OtherInstance.html" title="class in ij">OtherInstance</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#startTiming--">startTiming()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Calls System.currentTimeMillis() to save the current
time so it can be retrieved later using getStartTime()
to calculate the elapsed time of an operation.</div>
</dd>
<dt><a href="ij/plugin/Startup.html" title="class in ij.plugin"><span class="typeNameLink">Startup</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Edit/Options/Startup command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Startup.html#Startup--">Startup()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Startup.html" title="class in ij.plugin">Startup</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#startxd">startxd</a></span> - Variable in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#startyd">startyd</a></span> - Variable in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ParticleAnalyzer.html#staticShowChoice">staticShowChoice</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/ParticleAnalyzer.html" title="class in ij.plugin.filter">ParticleAnalyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#stats">stats</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#STATUS_STRING">STATUS_STRING</a></span> - Static variable in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Strings describing the status codes</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Measurements.html#STD_DEV">STD_DEV</a></span> - Static variable in interface ij.measure.<a href="ij/measure/Measurements.html" title="interface in ij.measure">Measurements</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#STD_DEV">STD_DEV</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#stdDev">stdDev</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Debugger.html#STEP">STEP</a></span> - Static variable in interface ij.macro.<a href="ij/macro/Debugger.html" title="interface in ij.macro">Debugger</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#stop--">stop()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Symbol.html#str">str</a></span> - Variable in class ij.macro.<a href="ij/macro/Symbol.html" title="class in ij.macro">Symbol</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#STRAIGHT_LINE">STRAIGHT_LINE</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#STRAIGHT_LINE">STRAIGHT_LINE</a></span> - Static variable in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">Constants for the built-in fit functions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Straightener.html#straighten-ij.ImagePlus-ij.gui.Roi-int-">straighten(ImagePlus, Roi, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Straightener.html" title="class in ij.plugin">Straightener</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Straightener.html" title="class in ij.plugin"><span class="typeNameLink">Straightener</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Edit/Selection/Straighten command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Straightener.html#Straightener--">Straightener()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Straightener.html" title="class in ij.plugin">Straightener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Straightener.html#straightenLine-ij.ImagePlus-int-">straightenLine(ImagePlus, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Straightener.html" title="class in ij.plugin">Straightener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Straightener.html#straightenStack-ij.ImagePlus-ij.gui.Roi-int-">straightenStack(ImagePlus, Roi, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Straightener.html" title="class in ij.plugin">Straightener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ContrastEnhancer.html#stretchHistogram-ij.ImagePlus-double-">stretchHistogram(ImagePlus, double)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ContrastEnhancer.html" title="class in ij.plugin">ContrastEnhancer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ContrastEnhancer.html#stretchHistogram-ij.process.ImageProcessor-double-">stretchHistogram(ImageProcessor, double)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ContrastEnhancer.html" title="class in ij.plugin">ContrastEnhancer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ContrastEnhancer.html#stretchHistogram-ij.process.ImageProcessor-double-ij.process.ImageStatistics-">stretchHistogram(ImageProcessor, double, ImageStatistics)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ContrastEnhancer.html" title="class in ij.plugin">ContrastEnhancer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#STRING">STRING</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#STRING_CONSTANT">STRING_CONSTANT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#STRING_FUNCTION">STRING_FUNCTION</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#stringField">stringField</a></span> - Variable in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#stringFunctionIDs">stringFunctionIDs</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#stringFunctions">stringFunctions</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><a href="ij/util/StringSorter.html" title="class in ij.util"><span class="typeNameLink">StringSorter</span></a> - Class in <a href="ij/util/package-summary.html">ij.util</a></dt>
<dd>
<div class="block">A simple QuickSort for String arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/StringSorter.html#StringSorter--">StringSorter()</a></span> - Constructor for class ij.util.<a href="ij/util/StringSorter.html" title="class in ij.util">StringSorter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#STRIP_BYTE_COUNT">STRIP_BYTE_COUNT</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#STRIP_OFFSETS">STRIP_OFFSETS</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#stripLengths">stripLengths</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#stripOffsets">stripOffsets</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#stroke">stroke</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#STROKE_COLOR">STROKE_COLOR</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#STROKE_WIDTH">STROKE_WIDTH</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#strokeColor">strokeColor</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#STYLE_KEY">STYLE_KEY</a></span> - Static variable in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#styles">styles</a></span> - Static variable in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#SUB_PIXEL_RESOLUTION">SUB_PIXEL_RESOLUTION</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/SubHyperstackMaker.html" title="class in ij.plugin"><span class="typeNameLink">SubHyperstackMaker</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin is used by the Image/Stacks/Tools/Make Substack
command to create substacks of hyperstacks.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/SubHyperstackMaker.html#SubHyperstackMaker--">SubHyperstackMaker()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/SubHyperstackMaker.html" title="class in ij.plugin">SubHyperstackMaker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/EllipseRoi.html#subPixelResolution--">subPixelResolution()</a></span> - Method in class ij.gui.<a href="ij/gui/EllipseRoi.html" title="class in ij.gui">EllipseRoi</a></dt>
<dd>
<div class="block">Always returns true.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#subPixelResolution--">subPixelResolution()</a></span> - Method in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd>
<div class="block">Always returns true.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#subPixelResolution--">subPixelResolution()</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Always returns true.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#subPixelResolution--">subPixelResolution()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#subPixelResolution--">subPixelResolution()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Returns true if this is a slection that supports sub-pixel resolution.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/RotatedRectRoi.html#subPixelResolution--">subPixelResolution()</a></span> - Method in class ij.gui.<a href="ij/gui/RotatedRectRoi.html" title="class in ij.gui">RotatedRectRoi</a></dt>
<dd>
<div class="block">Always returns true.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#subPixelResolution">subPixelResolution</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Use sub-pixel resolution with line selections</div>
</dd>
<dt><a href="ij/plugin/SubstackMaker.html" title="class in ij.plugin"><span class="typeNameLink">SubstackMaker</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Image/Stacks/Tools/Make Substack command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/SubstackMaker.html#SubstackMaker--">SubstackMaker()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/SubstackMaker.html" title="class in ij.plugin">SubstackMaker</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#SUBSTRING">SUBSTRING</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#SUBTRACT">SUBTRACT</a></span> - Static variable in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">dst=dst-src</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#subtract-double-">subtract(double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Subtracts 'value' from each pixel in the image or ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/BackgroundSubtracter.html#subtractBackround-ij.process.ImageProcessor-int-">subtractBackround(ImageProcessor, int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/BackgroundSubtracter.html" title="class in ij.plugin.filter">BackgroundSubtracter</a></dt>
<dd>
<div class="block">Depracated.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#subtractPoints-ij.gui.Roi-">subtractPoints(Roi)</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd>
<div class="block">Subtract the points that intersect the specified ROI and return
the result.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/BackgroundSubtracter.html#subtractRGBBackround-ij.process.ColorProcessor-int-">subtractRGBBackround(ColorProcessor, int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/BackgroundSubtracter.html" title="class in ij.plugin.filter">BackgroundSubtracter</a></dt>
<dd>
<div class="block">Depracated.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#SUBTYPE">SUBTYPE</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Minimizer.html#SUCCESS">SUCCESS</a></span> - Static variable in class ij.measure.<a href="ij/measure/Minimizer.html" title="class in ij.measure">Minimizer</a></dt>
<dd>
<div class="block">Status returned: successful completion</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Binner.html#SUM">SUM</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Binner.html" title="class in ij.plugin">Binner</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#SUM_METHOD">SUM_METHOD</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#summarize--">summarize()</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/PlugInFilter.html#SUPPORTS_MASKING">SUPPORTS_MASKING</a></span> - Static variable in interface ij.plugin.filter.<a href="ij/plugin/filter/PlugInFilter.html" title="interface in ij.plugin.filter">PlugInFilter</a></dt>
<dd>
<div class="block">Set this flag if the filter wants ImageJ, for non-rectangular
ROIs, to restore that part of the image that's inside the bounding
rectangle but outside of the ROI.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#suppressPluginNotFoundError--">suppressPluginNotFoundError()</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Temporarily suppress "plugin not found" errors.</div>
</dd>
<dt><a href="ij/plugin/SurfacePlotter.html" title="class in ij.plugin"><span class="typeNameLink">SurfacePlotter</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/SurfacePlotter.html#SurfacePlotter--">SurfacePlotter()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/SurfacePlotter.html" title="class in ij.plugin">SurfacePlotter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#swapPixelArrays--">swapPixelArrays()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Swaps the pixel and snapshot (undo) arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#swapPixelArrays--">swapPixelArrays()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Swaps the pixel and snapshot (undo) arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#swapPixelArrays--">swapPixelArrays()</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Swaps the pixel and snapshot (undo) arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#swapPixelArrays--">swapPixelArrays()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Swaps the pixel and snapshot (undo) buffers.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#swapPixelArrays--">swapPixelArrays()</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Swaps the pixel and snapshot (undo) arrays.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#swapQuadrants-ij.process.ImageProcessor-">swapQuadrants(ImageProcessor)</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Swap quadrants 1 and 3 and 2 and 4 of the specified ImageProcessor
so the power spectrum origin is at the center of the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#swapQuadrants--">swapQuadrants()</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Swap quadrants 1 and 3 and 2 and 4 of the image
contained in this FHT.</div>
</dd>
<dt><a href="ij/macro/Symbol.html" title="class in ij.macro"><span class="typeNameLink">Symbol</span></a> - Class in <a href="ij/macro/package-summary.html">ij.macro</a></dt>
<dd>
<div class="block">Objects of this class are used as entries in the macro language symbol table.</div>
</dd>
<dt><a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame"><span class="typeNameLink">SyncWindows</span></a> - Class in <a href="ij/plugin/frame/package-summary.html">ij.plugin.frame</a></dt>
<dd>
<div class="block">This class "synchronizes" mouse input in multiple windows.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#SyncWindows--">SyncWindows()</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Create window sync frame.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#SyncWindows-java.lang.String-">SyncWindows(String)</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd> </dd>
</dl>
<a name="I:T">
<!-- -->
</a>
<h2 class="title">T</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#T_POSITION">T_POSITION</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#TABLE">TABLE</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NewPlugin.html#TABLE">TABLE</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/NewPlugin.html" title="class in ij.plugin">NewPlugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#TABLE_FULL">TABLE_FULL</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#TAN">TAN</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackConverter.html#TCZ">TCZ</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/HyperStackConverter.html" title="class in ij.plugin">HyperStackConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NewPlugin.html#TEMPLATE">TEMPLATE</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/NewPlugin.html" title="class in ij.plugin">NewPlugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#temporarilyHide--">temporarilyHide()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Deprecated</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#TEXT">TEXT</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#TEXT">TEXT</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#TEXT">TEXT</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Text.html" title="class in ij.plugin"><span class="typeNameLink">Text</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Edit/Options/Fonts command and
the dialog displayed when you double click on the text tool.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Text.html#Text--">Text()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Text.html" title="class in ij.plugin">Text</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/NewPlugin.html#TEXT_FILE">TEXT_FILE</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/NewPlugin.html" title="class in ij.plugin">NewPlugin</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#textArea1">textArea1</a></span> - Variable in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#textArea2">textArea2</a></span> - Variable in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><a href="ij/io/TextEncoder.html" title="class in ij.io"><span class="typeNameLink">TextEncoder</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">Saves an image described by an ImageProcessor object as a tab-delimited text file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TextEncoder.html#TextEncoder-ij.process.ImageProcessor-ij.measure.Calibration-int-">TextEncoder(ImageProcessor, Calibration, int)</a></span> - Constructor for class ij.io.<a href="ij/io/TextEncoder.html" title="class in ij.io">TextEncoder</a></dt>
<dd>
<div class="block">Constructs a TextEncoder from an ImageProcessor and optional Calibration.</div>
</dd>
<dt><a href="ij/plugin/TextFileReader.html" title="class in ij.plugin"><span class="typeNameLink">TextFileReader</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin displays the contents of a text file in a window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/TextFileReader.html#TextFileReader--">TextFileReader()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/TextFileReader.html" title="class in ij.plugin">TextFileReader</a></dt>
<dd> </dd>
<dt><a href="ij/text/TextPanel.html" title="class in ij.text"><span class="typeNameLink">TextPanel</span></a> - Class in <a href="ij/text/package-summary.html">ij.text</a></dt>
<dd>
<div class="block">This is an unlimited size text panel with tab-delimited,
labeled and resizable columns.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#TextPanel--">TextPanel()</a></span> - Constructor for class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Constructs a new TextPanel.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#TextPanel-java.lang.String-">TextPanel(String)</a></span> - Constructor for class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd>
<div class="block">Constructs a new TextPanel.</div>
</dd>
<dt><a href="ij/plugin/TextReader.html" title="class in ij.plugin"><span class="typeNameLink">TextReader</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin opens a tab or comma delimeted text file as an image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/TextReader.html#TextReader--">TextReader()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/TextReader.html" title="class in ij.plugin">TextReader</a></dt>
<dd> </dd>
<dt><a href="ij/gui/TextRoi.html" title="class in ij.gui"><span class="typeNameLink">TextRoi</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This class is a rectangular ROI containing text.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#TextRoi-int-int-java.lang.String-">TextRoi(int, int, String)</a></span> - Constructor for class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Creates a TextRoi.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#TextRoi-java.lang.String-double-double-java.awt.Font-">TextRoi(String, double, double, Font)</a></span> - Constructor for class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Use this constructor as a drop-in replacement for ImageProcessor.drawString().</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#TextRoi-double-double-java.lang.String-">TextRoi(double, double, String)</a></span> - Constructor for class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Creates a TextRoi using sub-pixel coordinates.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#TextRoi-int-int-java.lang.String-java.awt.Font-">TextRoi(int, int, String, Font)</a></span> - Constructor for class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Creates a TextRoi using the specified location and Font.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#TextRoi-double-double-java.lang.String-java.awt.Font-">TextRoi(double, double, String, Font)</a></span> - Constructor for class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Creates a TextRoi using the specified sub-pixel location and Font.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#TextRoi-double-double-double-double-java.lang.String-java.awt.Font-">TextRoi(double, double, double, double, String, Font)</a></span> - Constructor for class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block">Creates a TextRoi using the specified location, size and Font.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#TextRoi-int-int-java.lang.String-java.awt.Font-java.awt.Color-">TextRoi(int, int, String, Font, Color)</a></span> - Constructor for class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span> </div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TextRoi.html#TextRoi-int-int-ij.ImagePlus-">TextRoi(int, int, ImagePlus)</a></span> - Constructor for class ij.gui.<a href="ij/gui/TextRoi.html" title="class in ij.gui">TextRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ColorChooser.html#textValueChanged-java.awt.event.TextEvent-">textValueChanged(TextEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ColorChooser.html" title="class in ij.gui">ColorChooser</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#textValueChanged-java.awt.event.TextEvent-">textValueChanged(TextEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#textValueChanged-java.awt.event.TextEvent-">textValueChanged(TextEvent)</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ChannelArranger.html#textValueChanged-java.awt.event.TextEvent-">textValueChanged(TextEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/ChannelArranger.html" title="class in ij.plugin">ChannelArranger</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Distribution.html#textValueChanged-java.awt.event.TextEvent-">textValueChanged(TextEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Distribution.html" title="class in ij.plugin">Distribution</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Duplicator.html#textValueChanged-java.awt.event.TextEvent-">textValueChanged(TextEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Duplicator.html" title="class in ij.plugin">Duplicator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ImageProperties.html#textValueChanged-java.awt.event.TextEvent-">textValueChanged(TextEvent)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/ImageProperties.html" title="class in ij.plugin.filter">ImageProperties</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#textValueChanged-java.awt.event.TextEvent-">textValueChanged(TextEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/LineWidthAdjuster.html#textValueChanged-java.awt.event.TextEvent-">textValueChanged(TextEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/LineWidthAdjuster.html" title="class in ij.plugin.frame">LineWidthAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Histogram.html#textValueChanged-java.awt.event.TextEvent-">textValueChanged(TextEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Histogram.html" title="class in ij.plugin">Histogram</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Resizer.html#textValueChanged-java.awt.event.TextEvent-">textValueChanged(TextEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Resizer.html" title="class in ij.plugin">Resizer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Scaler.html#textValueChanged-java.awt.event.TextEvent-">textValueChanged(TextEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Scaler.html" title="class in ij.plugin">Scaler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Slicer.html#textValueChanged-java.awt.event.TextEvent-">textValueChanged(TextEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Slicer.html" title="class in ij.plugin">Slicer</a></dt>
<dd> </dd>
<dt><a href="ij/text/TextWindow.html" title="class in ij.text"><span class="typeNameLink">TextWindow</span></a> - Class in <a href="ij/text/package-summary.html">ij.text</a></dt>
<dd>
<div class="block">Uses a TextPanel to displays text in a window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#TextWindow-java.lang.String-java.lang.String-int-int-">TextWindow(String, String, int, int)</a></span> - Constructor for class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd>
<div class="block">Opens a new single-column text window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#TextWindow-java.lang.String-java.lang.String-java.lang.String-int-int-">TextWindow(String, String, String, int, int)</a></span> - Constructor for class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd>
<div class="block">Opens a new multi-column text window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#TextWindow-java.lang.String-java.lang.String-java.util.ArrayList-int-int-">TextWindow(String, String, ArrayList, int, int)</a></span> - Constructor for class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd>
<div class="block">Opens a new multi-column text window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#TextWindow-java.lang.String-int-int-">TextWindow(String, int, int)</a></span> - Constructor for class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd>
<div class="block">Opens a new text window containing the contents of a text file.</div>
</dd>
<dt><a href="ij/plugin/TextWriter.html" title="class in ij.plugin"><span class="typeNameLink">TextWriter</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the File/Save As/Text command, which saves the
contents of Editor windows and TextWindows (e.g., "Log" and "Results").</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/TextWriter.html#TextWriter--">TextWriter()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/TextWriter.html" title="class in ij.plugin">TextWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#theLabel">theLabel</a></span> - Variable in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/EllipseFitter.html#theta">theta</a></span> - Variable in class ij.process.<a href="ij/process/EllipseFitter.html" title="class in ij.process">EllipseFitter</a></dt>
<dd>
<div class="block">Angle in radians</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#thread">thread</a></span> - Variable in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/ThreadLister.html" title="class in ij.plugin"><span class="typeNameLink">ThreadLister</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Displays thread information in a text window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ThreadLister.html#ThreadLister--">ThreadLister()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ThreadLister.html" title="class in ij.plugin">ThreadLister</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#THREADS">THREADS</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><a href="ij/util/ThreadUtil.html" title="class in ij.util"><span class="typeNameLink">ThreadUtil</span></a> - Class in <a href="ij/util/package-summary.html">ij.util</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/ThreadUtil.html#ThreadUtil--">ThreadUtil()</a></span> - Constructor for class ij.util.<a href="ij/util/ThreadUtil.html" title="class in ij.util">ThreadUtil</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#threshold-int-">threshold(int)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Sets pixels less than or equal to level to 0 and all other pixels to 255.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#threshold-int-">threshold(int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Not implemented.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#threshold-int-">threshold(int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Not implemented.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#threshold-int-">threshold(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Sets pixels less than or equal to level to 0 and all other
pixels to 255.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#threshold-int-">threshold(int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame"><span class="typeNameLink">ThresholdAdjuster</span></a> - Class in <a href="ij/plugin/frame/package-summary.html">ij.plugin.frame</a></dt>
<dd>
<div class="block">Adjusts the lower and upper threshold levels of the active image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#ThresholdAdjuster--">ThresholdAdjuster()</a></span> - Constructor for class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/Thresholder.html" title="class in ij.plugin"><span class="typeNameLink">Thresholder</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Process/Binary/Make Binary
and Convert to Mask commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Thresholder.html#Thresholder--">Thresholder()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Thresholder.html" title="class in ij.plugin">Thresholder</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/ThresholdToSelection.html" title="class in ij.plugin.filter"><span class="typeNameLink">ThresholdToSelection</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/ThresholdToSelection.html#ThresholdToSelection--">ThresholdToSelection()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/ThresholdToSelection.html" title="class in ij.plugin.filter">ThresholdToSelection</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#TIFF">TIFF</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#TIFF">TIFF</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#TIFF_AND_DICOM">TIFF_AND_DICOM</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><a href="ij/io/TiffDecoder.html" title="class in ij.io"><span class="typeNameLink">TiffDecoder</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">Decodes single and multi-image TIFF files.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#TiffDecoder-java.lang.String-java.lang.String-">TiffDecoder(String, String)</a></span> - Constructor for class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#TiffDecoder-java.io.InputStream-java.lang.String-">TiffDecoder(InputStream, String)</a></span> - Constructor for class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><a href="ij/io/TiffEncoder.html" title="class in ij.io"><span class="typeNameLink">TiffEncoder</span></a> - Class in <a href="ij/io/package-summary.html">ij.io</a></dt>
<dd>
<div class="block">Saves an image described by a FileInfo object as an uncompressed, big-endian TIFF file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffEncoder.html#TiffEncoder-ij.io.FileInfo-">TiffEncoder(FileInfo)</a></span> - Constructor for class ij.io.<a href="ij/io/TiffEncoder.html" title="class in ij.io">TiffEncoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#TILE_WIDTH">TILE_WIDTH</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/FFTFilter.html#tileMirror-ij.process.ImageProcessor-int-int-int-int-">tileMirror(ImageProcessor, int, int, int, int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/FFTFilter.html" title="class in ij.plugin.filter">FFTFilter</a></dt>
<dd>
<div class="block">Puts ImageProcessor (ROI) into a new ImageProcessor of size width x height y at position (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#time-ij.ImagePlus-long-">time(ImagePlus, long)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Experimental</div>
</dd>
<dt><a href="ij/plugin/Timer.html" title="class in ij.plugin"><span class="typeNameLink">Timer</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">ImageJ plugin for measuring the speed of various Java operations.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Timer.html#Timer--">Timer()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Timer.html" title="class in ij.plugin">Timer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#TO_BINARY">TO_BINARY</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#TO_HEX">TO_HEX</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#TO_LOWER_CASE">TO_LOWER_CASE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#TO_SCALED">TO_SCALED</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#TO_STRING">TO_STRING</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#TO_UNSCALED">TO_UNSCALED</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#TO_UPPER_CASE">TO_UPPER_CASE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#toArray--">toArray()</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Returns on array containing the ROIs in this Overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#toByteArray--">toByteArray()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Writes this plot into a byte array containing (1) the serialized PlotProperties and
(2) the serialized Vector of all 'added' PlotObjects.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#toDouble-float:A-">toDouble(float[])</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd>
<div class="block">Converts the float array 'a' to a double array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#toEDM-ij.process.ImageProcessor-">toEDM(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">Converts a binary image into a 8-bit grayscale Euclidean Distance Map
(EDM).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#toFloat-int:A-">toFloat(int[])</a></span> - Static method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Converts an int array to a float array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#toFloat-int-ij.process.FloatProcessor-">toFloat(int, FloatProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd>
<div class="block">Returns a FloatProcessor with the same image, no scaling or calibration
(pixel values 0 to 255).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#toFloat-int-ij.process.FloatProcessor-">toFloat(int, FloatProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd>
<div class="block">Returns a FloatProcessor with one color channel of the image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#toFloat-int-ij.process.FloatProcessor-">toFloat(int, FloatProcessor)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd>
<div class="block">Returns this FloatProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#toFloat-int-ij.process.FloatProcessor-">toFloat(int, FloatProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a FloatProcessor with the image or one color channel thereof.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#toFloat-int-ij.process.FloatProcessor-">toFloat(int, FloatProcessor)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd>
<div class="block">Returns a FloatProcessor with the same image, no scaling or calibration
(pixel values 0 to 65535).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#toFloat-double:A-">toFloat(double[])</a></span> - Static method in class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd>
<div class="block">Converts the double array 'a' to a float array.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#toFloatArrays--">toFloatArrays()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ByteProcessor.html#toFloatProcessors--">toFloatProcessors()</a></span> - Method in class ij.process.<a href="ij/process/ByteProcessor.html" title="class in ij.process">ByteProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/WindowManager.html#toFront-java.awt.Frame-">toFront(Frame)</a></span> - Static method in class ij.<a href="ij/WindowManager.html" title="class in ij">WindowManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackConverter.html#toHyperStack-ij.ImagePlus-int-int-int-">toHyperStack(ImagePlus, int, int, int)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/HyperStackConverter.html" title="class in ij.plugin">HyperStackConverter</a></dt>
<dd>
<div class="block">Converts the specified stack into a hyperstack with 'c' channels, 'z' slices and
't' frames using the default ordering ("xyczt") and display mode ("Composite").</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackConverter.html#toHyperStack-ij.ImagePlus-int-int-int-java.lang.String-java.lang.String-">toHyperStack(ImagePlus, int, int, int, String, String)</a></span> - Static method in class ij.plugin.<a href="ij/plugin/HyperStackConverter.html" title="class in ij.plugin">HyperStackConverter</a></dt>
<dd>
<div class="block">Converts the specified stack into a hyperstack with 'c' channels,
'z' slices and 't' frames.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#toInt-float:A-">toInt(float[])</a></span> - Static method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Converts a float array to an int array using truncation.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#toInt-float:A-int:A-int-">toInt(float[], int[], int)</a></span> - Static method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#toIntR-float:A-">toIntR(float[])</a></span> - Static method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">Converts a float array to an int array using rounding.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#TOK_MASK">TOK_MASK</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#TOK_SHIFT">TOK_SHIFT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Tokenizer.html#tokenize-java.lang.String-">tokenize(String)</a></span> - Method in class ij.macro.<a href="ij/macro/Tokenizer.html" title="class in ij.macro">Tokenizer</a></dt>
<dd>
<div class="block">Uses a StreamTokenizer to convert an ImageJ macro file into a token stream.</div>
</dd>
<dt><a href="ij/macro/Tokenizer.html" title="class in ij.macro"><span class="typeNameLink">Tokenizer</span></a> - Class in <a href="ij/macro/package-summary.html">ij.macro</a></dt>
<dd>
<div class="block">This class converts an imageJ macro file file into a token stream.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Tokenizer.html#Tokenizer--">Tokenizer()</a></span> - Constructor for class ij.macro.<a href="ij/macro/Tokenizer.html" title="class in ij.macro">Tokenizer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJEventListener.html#TOOL_CHANGED">TOOL_CHANGED</a></span> - Static variable in interface ij.<a href="ij/IJEventListener.html" title="interface in ij">IJEventListener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#TOOL_ID">TOOL_ID</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#TOOL_KEY">TOOL_KEY</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><a href="ij/gui/Toolbar.html" title="class in ij.gui"><span class="typeNameLink">Toolbar</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">The ImageJ toolbar.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#Toolbar--">Toolbar()</a></span> - Constructor for class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><a href="ij/util/Tools.html" title="class in ij.util"><span class="typeNameLink">Tools</span></a> - Class in <a href="ij/util/package-summary.html">ij.util</a></dt>
<dd>
<div class="block">This class contains static utility methods.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/Tools.html#Tools--">Tools()</a></span> - Constructor for class ij.util.<a href="ij/util/Tools.html" title="class in ij.util">Tools</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#TOOLS_MENU">TOOLS_MENU</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#TOP">TOP</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#TOP_LEFT">TOP_LEFT</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Legend positions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#TOP_MARGIN">TOP_MARGIN</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">Not a fixed value any more, use getDrawingFrame() to get the drawing area</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#TOP_RIGHT">TOP_RIGHT</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Legend positions</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#toShape-java.lang.String-">toShape(String)</a></span> - Static method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Returns the number for a given plot symbol shape, -1 for xError and -2 for yError (all case-insensitive)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#toString--">toString()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#toString--">toString()</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#toString--">toString()</a></span> - Method in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#toString--">toString()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#toString--">toString()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#toString--">toString()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#toString--">toString()</a></span> - Method in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Symbol.html#toString--">toString()</a></span> - Method in class ij.macro.<a href="ij/macro/Symbol.html" title="class in ij.macro">Symbol</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#toString--">toString()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#toString--">toString()</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/JavaScriptEvaluator.html#toString--">toString()</a></span> - Method in class ij.plugin.<a href="ij/plugin/JavaScriptEvaluator.html" title="class in ij.plugin">JavaScriptEvaluator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#toString--">toString()</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Returns a string containing information about this FHT.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#toString--">toString()</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Returns a string containing information about this ImageProcessor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#toString--">toString()</a></span> - Method in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/LUT.html#toString--">toString()</a></span> - Method in class ij.process.<a href="ij/process/LUT.html" title="class in ij.process">LUT</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/ArrayUtil.html#toString--">toString()</a></span> - Method in class ij.util.<a href="ij/util/ArrayUtil.html" title="class in ij.util">ArrayUtil</a></dt>
<dd>
<div class="block">information to be displayed</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/EDM.html#toWatershed-ij.process.ImageProcessor-">toWatershed(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/EDM.html" title="class in ij.plugin.filter">EDM</a></dt>
<dd>
<div class="block">Do watershed segmentation based on the EDM of the
foreground objects (nonzero pixels) in an 8-bit image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Debugger.html#TRACE">TRACE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/Debugger.html" title="interface in ij.macro">Debugger</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#TRACED_ROI">TRACED_ROI</a></span> - Static variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#transform--">transform()</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Performs a forward transform, converting this image into the frequency domain.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Undo.html#TRANSFORM">TRANSFORM</a></span> - Static variable in class ij.<a href="ij/Undo.html" title="class in ij">Undo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/FHT.html#transform1D-float:A-">transform1D(float[])</a></span> - Method in class ij.process.<a href="ij/process/FHT.html" title="class in ij.process">FHT</a></dt>
<dd>
<div class="block">Performs an optimized 1D Fast Hartley Transform (FHT) of an array.</div>
</dd>
<dt><a href="ij/plugin/filter/Transformer.html" title="class in ij.plugin.filter"><span class="typeNameLink">Transformer</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">Implements the Flip and Rotate commands in the Image/Transform submenu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Transformer.html#Transformer--">Transformer()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Transformer.html" title="class in ij.plugin.filter">Transformer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#translate-int-int-">translate(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Moves all the ROIs in this overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Overlay.html#translate-double-double-">translate(double, double)</a></span> - Method in class ij.gui.<a href="ij/gui/Overlay.html" title="class in ij.gui">Overlay</a></dt>
<dd>
<div class="block">Moves all the ROIs in this overlay.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#translate-double-double-">translate(double, double)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd>
<div class="block">Moves the selected ROIs or all the ROIs if none are selected.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#translate-double-double-">translate(double, double)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Moves the image or selection vertically or horizontally by a specified
number of pixels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#translate-int-int-boolean-">translate(int, int, boolean)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by translate(x,y)</span></div>
</div>
</dd>
<dt><a href="ij/plugin/filter/Translator.html" title="class in ij.plugin.filter"><span class="typeNameLink">Translator</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This plugin implements the Image/Translate command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Translator.html#Translator--">Translator()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Translator.html" title="class in ij.plugin.filter">Translator</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#TRANSPARENT">TRANSPARENT</a></span> - Static variable in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd>
<div class="block">Display modes (note: TRANSPARENT mode has not yet been implemented)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#TRIANGLE">TRIANGLE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Display points using an tiangular mark.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#TRIANGLE">TRIANGLE</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Display points using an tiangular mark.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#trim--">trim()</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Frees memory by deleting a few slices from the end of the stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#trim--">trim()</a></span> - Method in class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Does nothing.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/FolderOpener.html#trimFileList-java.lang.String:A-">trimFileList(String[])</a></span> - Method in class ij.plugin.<a href="ij/plugin/FolderOpener.html" title="class in ij.plugin">FolderOpener</a></dt>
<dd>
<div class="block">Removes names that start with "." or end with ".db", ".txt", ".lut", "roi", ".pty", ".hdr", ".py", etc.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Macro.html#trimKey-java.lang.String-">trimKey(String)</a></span> - Static method in class ij.<a href="ij/Macro.html" title="class in ij">Macro</a></dt>
<dd> </dd>
<dt><a href="ij/gui/TrimmedButton.html" title="class in ij.gui"><span class="typeNameLink">TrimmedButton</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This is an extended Button class used to reduce the width of the HUGE buttons on Mac OS X.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/TrimmedButton.html#TrimmedButton-java.lang.String-int-">TrimmedButton(String, int)</a></span> - Constructor for class ij.gui.<a href="ij/gui/TrimmedButton.html" title="class in ij.gui">TrimmedButton</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#trimProcessor--">trimProcessor()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Frees RAM by setting the snapshot (undo) buffer in
the current ImageProcessor to null.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#TRUE">TRUE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#tSelector">tSelector</a></span> - Variable in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#type">type</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#TYPE">TYPE</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Symbol.html#type">type</a></span> - Variable in class ij.macro.<a href="ij/macro/Symbol.html" title="class in ij.macro">Symbol</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Undo.html#TYPE_CONVERSION">TYPE_CONVERSION</a></span> - Static variable in class ij.<a href="ij/Undo.html" title="class in ij">Undo</a></dt>
<dd> </dd>
<dt><a href="ij/process/TypeConverter.html" title="class in ij.process"><span class="typeNameLink">TypeConverter</span></a> - Class in <a href="ij/process/package-summary.html">ij.process</a></dt>
<dd>
<div class="block">This class converts an ImageProcessor to another data type.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/TypeConverter.html#TypeConverter-ij.process.ImageProcessor-boolean-">TypeConverter(ImageProcessor, boolean)</a></span> - Constructor for class ij.process.<a href="ij/process/TypeConverter.html" title="class in ij.process">TypeConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PointRoi.html#types">types</a></span> - Static variable in class ij.gui.<a href="ij/gui/PointRoi.html" title="class in ij.gui">PointRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#types">types</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#typeSet">typeSet</a></span> - Variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackConverter.html#TZC">TZC</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/HyperStackConverter.html" title="class in ij.plugin">HyperStackConverter</a></dt>
<dd> </dd>
</dl>
<a name="I:U">
<!-- -->
</a>
<h2 class="title">U</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#umean">umean</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Uncalibrated mean</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#UNCALIBRATED_OD">UNCALIBRATED_OD</a></span> - Static variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd> </dd>
<dt><a href="ij/Undo.html" title="class in ij"><span class="typeNameLink">Undo</span></a> - Class in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">This class consists of static methods and
fields that implement ImageJ's Undo command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Undo.html#Undo--">Undo()</a></span> - Constructor for class ij.<a href="ij/Undo.html" title="class in ij">Undo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Undo.html#undo--">undo()</a></span> - Static method in class ij.<a href="ij/Undo.html" title="class in ij">Undo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#uninstallPlugin-java.lang.String-">uninstallPlugin(String)</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Deletes a command installed by Plugins/Shortcuts/Add Shortcut.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#unit">unit</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#units">units</a></span> - Variable in class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#UNKNOWN">UNKNOWN</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#UNKNOWN">UNKNOWN</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#unlock--">unlock()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Unlocks the image.</div>
</dd>
<dt><a href="ij/plugin/filter/UnsharpMask.html" title="class in ij.plugin.filter"><span class="typeNameLink">UnsharpMask</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This plugin-filter implements ImageJ's Unsharp Mask command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/UnsharpMask.html#UnsharpMask--">UnsharpMask()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/UnsharpMask.html" title="class in ij.plugin.filter">UnsharpMask</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#UNUSED">UNUSED</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#unzoom--">unzoom()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Implements the Image/Zoom/Original Scale command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#unzoom--">unzoom()</a></span> - Method in class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">Implements the Image/Zoom/Original Scale command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#update-java.awt.Graphics-">update(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProgressBar.html#update-java.awt.Graphics-">update(Graphics)</a></span> - Method in class ij.gui.<a href="ij/gui/ProgressBar.html" title="class in ij.gui">ProgressBar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#update-boolean-boolean-">update(boolean, boolean)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd>
<div class="block">If 'add' is true, adds this selection to the previous one.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImageStack.html#update-ij.process.ImageProcessor-">update(ImageProcessor)</a></span> - Method in class ij.<a href="ij/ImageStack.html" title="class in ij">ImageStack</a></dt>
<dd>
<div class="block">Updates this stack so its attributes, such as min, max,
calibration table and color model, are the same as 'ip'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#update-int-ij.ImagePlus-ij.gui.Roi-">update(int, ImagePlus, Roi)</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Channels.html#update--">update()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Channels.html" title="class in ij.plugin.frame">Channels</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ContrastAdjuster.html#update--">update()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/ContrastAdjuster.html" title="class in ij.plugin.frame">ContrastAdjuster</a></dt>
<dd>
<div class="block">Updates the ContrastAdjuster.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/LineWidthAdjuster.html#update--">update()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/LineWidthAdjuster.html" title="class in ij.plugin.frame">LineWidthAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#update--">update()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd>
<div class="block">Notifies the ThresholdAdjuster that the image has changed.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PointToolOptions.html#update--">update()</a></span> - Static method in class ij.plugin.<a href="ij/plugin/PointToolOptions.html" title="class in ij.plugin">PointToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#UPDATE_DISPLAY">UPDATE_DISPLAY</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#UPDATE_RESULTS">UPDATE_RESULTS</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#updateAllChannelsAndDraw--">updateAllChannelsAndDraw()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#updateAndDraw--">updateAndDraw()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#updateAndDraw--">updateAndDraw()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Updates this image from the pixel data in its
associated ImageProcessor, then displays it.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ContrastAdjuster.html#updateAndDraw--">updateAndDraw()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ContrastAdjuster.html" title="class in ij.plugin.frame">ContrastAdjuster</a></dt>
<dd>
<div class="block">Resets this ContrastAdjuster and brings it to the front.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#updateAndRepaintWindow--">updateAndRepaintWindow()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Calls updateAndDraw to update from the pixel data
and draw the image, and also repaints the image
window to force the information displayed above
the image (dimension, type, size) to be updated.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#updateArrayInspector--">updateArrayInspector()</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd>
<div class="block">Updates Array inspector if variable exists, otherwise closes
ArrayInspector</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#updateChannelAndDraw--">updateChannelAndDraw()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#updateChannelAndDraw--">updateChannelAndDraw()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Updates this image from the pixel data in its
associated ImageProcessor, then displays it.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Channels.html#updateChannels--">updateChannels()</a></span> - Static method in class ij.plugin.frame.<a href="ij/plugin/frame/Channels.html" title="class in ij.plugin.frame">Channels</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#updateClassName-java.lang.String-java.lang.String-">updateClassName(String, String)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd>
<div class="block">Changes a plugins class name to reflect a new file name.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#updateClipRect--">updateClipRect()</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#updateColumnHeadings-java.lang.String-">updateColumnHeadings(String)</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#updateComposite-int:A-int-">updateComposite(int[], int)</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#updateComposite-int:A-int-">updateComposite(int[], int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">CompositeImage calls this method to generate an updated color image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#UPDATED">UPDATED</a></span> - Static variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#updateDebugWindow-java.lang.String:A-ij.text.TextWindow-">updateDebugWindow(String[], TextWindow)</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextPanel.html#updateDisplay--">updateDisplay()</a></span> - Method in class ij.text.<a href="ij/text/TextPanel.html" title="class in ij.text">TextPanel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#updateFullWindow">updateFullWindow</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#updateHeadings--">updateHeadings()</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Redisplays the results table.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/CompositeImage.html#updateImage--">updateImage()</a></span> - Method in class ij.<a href="ij/CompositeImage.html" title="class in ij">CompositeImage</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#updateImage-ij.ImagePlus-">updateImage(ImagePlus)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#updateImage--">updateImage()</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Draws the plot again, ignored if the plot has not been drawn before or the plot is frozen
If the ImagePlus exist, updates it and its calibration.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#updateImage--">updateImage()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">ImageCanvas.paint() calls this method when the
ImageProcessor has generated a new image.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#updateImageJMenus--">updateImageJMenus()</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileSaver.html#updateImagePlus-java.lang.String-int-">updateImagePlus(String, int)</a></span> - Method in class ij.io.<a href="ij/io/FileSaver.html" title="class in ij.io">FileSaver</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#updateMenus--">updateMenus()</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Updates the Image/Type and Window menus.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ScrollbarWithLabel.html#updatePlayPauseIcon--">updatePlayPauseIcon()</a></span> - Method in class ij.gui.<a href="ij/gui/ScrollbarWithLabel.html" title="class in ij.gui">ScrollbarWithLabel</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#updatePolygon--">updatePolygon()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#updatePosition-int-int-int-">updatePosition(int, int, int)</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#updateResults--">updateResults()</a></span> - Method in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd>
<div class="block">Updates the Results window.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#updateSliceSelector--">updateSliceSelector()</a></span> - Method in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd>
<div class="block">Updates the stack scrollbar.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#updateStatusbarValue--">updateStatusbarValue()</a></span> - Method in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd>
<div class="block">Redisplays the (x,y) coordinates and pixel value (which may
have changed) in the status bar.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#updateUrl-java.lang.String-">updateUrl(String)</a></span> - Static method in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd>
<div class="block">Can't open imagej.nih.gov URLs due to encryption so redirect to mirror.nih.net.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#updateWideLine-float-">updateWideLine(float)</a></span> - Method in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#updateWindowList--">updateWindowList()</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#updateWindowMenuItem-java.lang.String-java.lang.String-">updateWindowMenuItem(String, String)</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Changes the name of an item in the Window menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#updateWindowMenuItem-ij.ImagePlus-java.lang.String-java.lang.String-">updateWindowMenuItem(ImagePlus, String, String)</a></span> - Static method in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd>
<div class="block">Changes the name of an item in the Window menu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#updateY-int-int-">updateY(int, int)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Returns an updated Y coordinate based on
the current "Invert Y Coordinates" flag.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Analyzer.html#updateY-double-int-">updateY(double, int)</a></span> - Static method in class ij.plugin.filter.<a href="ij/plugin/filter/Analyzer.html" title="class in ij.plugin.filter">Analyzer</a></dt>
<dd>
<div class="block">Returns an updated Y coordinate based on
the current "Invert Y Coordinates" flag.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#upperThreshold">upperThreshold</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Maximum threshold when "Limit to threshold" enabled</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#URL">URL</a></span> - Static variable in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#url">url</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/URLOpener.html" title="class in ij.plugin"><span class="typeNameLink">URLOpener</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Opens TIFFs, ZIP compressed TIFFs, DICOMs, GIFs and JPEGs using a URL.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/URLOpener.html#URLOpener--">URLOpener()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/URLOpener.html" title="class in ij.plugin">URLOpener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#useFileChooser">useFileChooser</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Use the file chooser to import and export image sequences on Windows and Linux</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#useInvertingLut">useInvertingLut</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Open 8-bit images with inverting LUT so 0 is white and 255 is black.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#useJFileChooser">useJFileChooser</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Use JFileChooser instead of FileDialog to open and save files.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#useNamesAsLabels">useNamesAsLabels</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Use ROI names as "show all" labels in the ROI Manager</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#usePointer">usePointer</a></span> - Static variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#usePointerCursor">usePointerCursor</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Use pointer cursor instead of cross</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#USER_FUNCTION">USER_FUNCTION</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/CurveFitter.html#userFunction-double:A-double-">userFunction(double[], double)</a></span> - Method in class ij.measure.<a href="ij/measure/CurveFitter.html" title="class in ij.measure">CurveFitter</a></dt>
<dd>
<div class="block">This function is called by the Minimizer and calculates the sum of squared
residuals for given parameters.</div>
</dd>
<dt><a href="ij/measure/UserFunction.html" title="interface in ij.measure"><span class="typeNameLink">UserFunction</span></a> - Interface in <a href="ij/measure/package-summary.html">ij.measure</a></dt>
<dd>
<div class="block">A plugin should implement this interface for minimizing a single-valued function
or fitting a curve with a custom fit function.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/measure/UserFunction.html#userFunction-double:A-double-">userFunction(double[], double)</a></span> - Method in interface ij.measure.<a href="ij/measure/UserFunction.html" title="interface in ij.measure">UserFunction</a></dt>
<dd>
<div class="block">A user-supplied function</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#useSystemProxies">useSystemProxies</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Set the "java.net.useSystemProxies" property</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#useTemplate-ij.gui.Plot-">useTemplate(Plot)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adjusts the format with another plot as a template, using the current
(usually default) flags of this plot.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#useTemplate-ij.gui.Plot-int-">useTemplate(Plot, int)</a></span> - Method in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Adjusts the format (style) with another plot as a template.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#UTILITIES_MENU">UTILITIES_MENU</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
</dl>
<a name="I:V">
<!-- -->
</a>
<h2 class="title">V</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#validDimensions--">validDimensions()</a></span> - Method in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PluginInstaller.html#validExtensions">validExtensions</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/PluginInstaller.html" title="class in ij.plugin">PluginInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#value">value</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/Symbol.html#value">value</a></span> - Variable in class ij.macro.<a href="ij/macro/Symbol.html" title="class in ij.macro">Symbol</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#valueChanged-javax.swing.event.ListSelectionEvent-">valueChanged(ListSelectionEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/AutoThresholder.Method.html#valueOf-java.lang.String-">valueOf(String)</a></span> - Static method in enum ij.process.<a href="ij/process/AutoThresholder.Method.html" title="enum in ij.process">AutoThresholder.Method</a></dt>
<dd>
<div class="block">Returns the enum constant of this type with the specified name.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/AutoThresholder.Method.html#values--">values()</a></span> - Static method in enum ij.process.<a href="ij/process/AutoThresholder.Method.html" title="enum in ij.process">AutoThresholder.Method</a></dt>
<dd>
<div class="block">Returns an array containing the constants of this enum type, in
the order they are declared.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#valueUnit">valueUnit</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#VAR">VAR</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Filters3D.html#VAR">VAR</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/Filters3D.html" title="class in ij.plugin">Filters3D</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/RankFilters.html#VARIANCE">VARIANCE</a></span> - Static variable in class ij.plugin.filter.<a href="ij/plugin/filter/RankFilters.html" title="class in ij.plugin.filter">RankFilters</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#VERSION">VERSION</a></span> - Static variable in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd>
<div class="block">Plugins should call IJ.getVersion() or IJ.getFullVersion() to get the version string.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#VERSION_OFFSET">VERSION_OFFSET</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#versionLessThan-java.lang.String-">versionLessThan(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Displays an error message and returns true if the
ImageJ version is less than the one specified.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#verticalProfile">verticalProfile</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Plot rectangular selectons vertically</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#VGAP">VGAP</a></span> - Static variable in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#virtualStack">virtualStack</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><a href="ij/VirtualStack.html" title="class in ij"><span class="typeNameLink">VirtualStack</span></a> - Class in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">This class represents an array of disk-resident images.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#VirtualStack--">VirtualStack()</a></span> - Constructor for class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Default constructor.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#VirtualStack-int-int-java.awt.image.ColorModel-java.lang.String-">VirtualStack(int, int, ColorModel, String)</a></span> - Constructor for class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Creates an empty virtual stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/VirtualStack.html#VirtualStack-int-int-int-">VirtualStack(int, int, int)</a></span> - Constructor for class ij.<a href="ij/VirtualStack.html" title="class in ij">VirtualStack</a></dt>
<dd>
<div class="block">Creates a virtual stack with no backing storage.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#vistaHint">vistaHint</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#vListMap">vListMap</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Hashtable to map list ids to image window ids.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#vwins">vwins</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Indices of synchronized image windows are maintained in this Vector.</div>
</dd>
</dl>
<a name="I:W">
<!-- -->
</a>
<h2 class="title">W</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/IJ.html#wait-int-">wait(int)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block">Delays 'msecs' milliseconds.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#WAIT">WAIT</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#WAIT_FOR_USER">WAIT_FOR_USER</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><a href="ij/gui/WaitForUserDialog.html" title="class in ij.gui"><span class="typeNameLink">WaitForUserDialog</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This is a non-modal dialog box used to ask the user to perform some task
while a macro or plugin is running.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/WaitForUserDialog.html#WaitForUserDialog-java.lang.String-java.lang.String-">WaitForUserDialog(String, String)</a></span> - Constructor for class ij.gui.<a href="ij/gui/WaitForUserDialog.html" title="class in ij.gui">WaitForUserDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/WaitForUserDialog.html#WaitForUserDialog-java.lang.String-">WaitForUserDialog(String)</a></span> - Constructor for class ij.gui.<a href="ij/gui/WaitForUserDialog.html" title="class in ij.gui">WaitForUserDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Toolbar.html#WAND">WAND</a></span> - Static variable in class ij.gui.<a href="ij/gui/Toolbar.html" title="class in ij.gui">Toolbar</a></dt>
<dd> </dd>
<dt><a href="ij/gui/Wand.html" title="class in ij.gui"><span class="typeNameLink">Wand</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">This class implements ImageJ's wand (tracing) tool.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Wand.html#Wand-ij.process.ImageProcessor-">Wand(ImageProcessor)</a></span> - Constructor for class ij.gui.<a href="ij/gui/Wand.html" title="class in ij.gui">Wand</a></dt>
<dd>
<div class="block">Constructs a Wand object from an ImageProcessor.</div>
</dd>
<dt><a href="ij/plugin/WandToolOptions.html" title="class in ij.plugin"><span class="typeNameLink">WandToolOptions</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the Edit/Options/Wand Tool command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/WandToolOptions.html#WandToolOptions--">WandToolOptions()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/WandToolOptions.html" title="class in ij.plugin">WandToolOptions</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#wasCanceled--">wasCanceled()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns true if the user clicked on "Cancel".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/Interpreter.html#wasError--">wasError()</a></span> - Method in class ij.macro.<a href="ij/macro/Interpreter.html" title="class in ij.macro">Interpreter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#wasOKed--">wasOKed()</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd>
<div class="block">Returns true if the user has clicked on "OK" or a macro is running.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/Prefs.html#weightedColor">weightedColor</a></span> - Static variable in class ij.<a href="ij/Prefs.html" title="class in ij">Prefs</a></dt>
<dd>
<div class="block">Color to grayscale conversion is weighted (0.299, 0.587, 0.114) if the variable is true.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorProcessor.html#weightedHistogram--">weightedHistogram()</a></span> - Method in class ij.process.<a href="ij/process/ColorProcessor.html" title="class in ij.process">ColorProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/DownsizeTable.html#weights">weights</a></span> - Variable in class ij.process.<a href="ij/process/DownsizeTable.html" title="class in ij.process">DownsizeTable</a></dt>
<dd>
<div class="block">For each source point, weights for adding it to the destination point
given in the corresponding element of 'indices'</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Shadows.html#west-ij.process.ImageProcessor-">west(ImageProcessor)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/Shadows.html" title="class in ij.plugin.filter">Shadows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#WHILE">WHILE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#whiteIsZero">whiteIsZero</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#whitePoint">whitePoint</a></span> - Variable in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#wideLine">wideLine</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProgressBar.html#WIDTH">WIDTH</a></span> - Static variable in class ij.gui.<a href="ij/gui/ProgressBar.html" title="class in ij.gui">ProgressBar</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#width">width</a></span> - Variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#width">width</a></span> - Variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#width">width</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#width">width</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Arrow.html#WIDTH_KEY">WIDTH_KEY</a></span> - Static variable in class ij.gui.<a href="ij/gui/Arrow.html" title="class in ij.gui">Arrow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/text/TextWindow.html#WIDTH_KEY">WIDTH_KEY</a></span> - Static variable in class ij.text.<a href="ij/text/TextWindow.html" title="class in ij.text">TextWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#WIDTHD">WIDTHD</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><a href="ij/util/WildcardMatch.html" title="class in ij.util"><span class="typeNameLink">WildcardMatch</span></a> - Class in <a href="ij/util/package-summary.html">ij.util</a></dt>
<dd>
<div class="block">This class allows for simple wildcard pattern matching.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/util/WildcardMatch.html#WildcardMatch--">WildcardMatch()</a></span> - Constructor for class ij.util.<a href="ij/util/WildcardMatch.html" title="class in ij.util">WildcardMatch</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/util/WildcardMatch.html#WildcardMatch-char-char-">WildcardMatch(char, char)</a></span> - Constructor for class ij.util.<a href="ij/util/WildcardMatch.html" title="class in ij.util">WildcardMatch</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImagePlus.html#win">win</a></span> - Variable in class ij.<a href="ij/ImagePlus.html" title="class in ij">ImagePlus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/Menus.html#WINDOW_MENU_ITEMS">WINDOW_MENU_ITEMS</a></span> - Static variable in class ij.<a href="ij/Menus.html" title="class in ij">Menus</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MessageDialog.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/MessageDialog.html" title="class in ij.gui">MessageDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Called when the window is activated (WindowListener)
Window layout is finished at latest a few millisec after windowActivated, then the
'wasActivated' boolean is set to tell the ImageCanvas that resize events should
lead to resizing the canvas (before, creating the layout can lead to resize events)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/YesNoCancelDialog.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui">YesNoCancelDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ColorThresholder.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ColorThresholder.html" title="class in ij.plugin.frame">ColorThresholder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ContrastAdjuster.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ContrastAdjuster.html" title="class in ij.plugin.frame">ContrastAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd>
<div class="block">Override windowActivated in PlugInFrame to
prevent Mac menu bar from being installed.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/LineWidthAdjuster.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/LineWidthAdjuster.html" title="class in ij.plugin.frame">LineWidthAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInDialog.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInDialog.html" title="class in ij.plugin.frame">PlugInDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInFrame.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInFrame.html" title="class in ij.plugin.frame">PlugInFrame</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Recorder.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/Recorder.html" title="class in ij.plugin.frame">Recorder</a></dt>
<dd>
<div class="block">Override windowActivated in PlugInFrame.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/RoiManager.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/RoiManager.html" title="class in ij.plugin.frame">RoiManager</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/ThresholdAdjuster.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/ThresholdAdjuster.html" title="class in ij.plugin.frame">ThresholdAdjuster</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#windowActivated-java.awt.event.WindowEvent-">windowActivated(WindowEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#windowClosed-java.awt.event.WindowEvent-">windowClosed(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#windowClosed-java.awt.event.WindowEvent-">windowClosed(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MessageDialog.html#windowClosed-java.awt.event.WindowEvent-">windowClosed(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/MessageDialog.html" title="class in ij.gui">MessageDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/YesNoCancelDialog.html#windowClosed-java.awt.event.WindowEvent-">windowClosed(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui">YesNoCancelDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#windowClosed-java.awt.event.WindowEvent-">windowClosed(WindowEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#windowClosed-java.awt.event.WindowEvent-">windowClosed(WindowEvent)</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#windowClosed-java.awt.event.WindowEvent-">windowClosed(WindowEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInDialog.html#windowClosed-java.awt.event.WindowEvent-">windowClosed(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInDialog.html" title="class in ij.plugin.frame">PlugInDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInFrame.html#windowClosed-java.awt.event.WindowEvent-">windowClosed(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInFrame.html" title="class in ij.plugin.frame">PlugInFrame</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#windowClosed-java.awt.event.WindowEvent-">windowClosed(WindowEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#windowClosing-java.awt.event.WindowEvent-">windowClosing(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#windowClosing-java.awt.event.WindowEvent-">windowClosing(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MessageDialog.html#windowClosing-java.awt.event.WindowEvent-">windowClosing(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/MessageDialog.html" title="class in ij.gui">MessageDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/NonBlockingGenericDialog.html#windowClosing-java.awt.event.WindowEvent-">windowClosing(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/NonBlockingGenericDialog.html" title="class in ij.gui">NonBlockingGenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/YesNoCancelDialog.html#windowClosing-java.awt.event.WindowEvent-">windowClosing(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui">YesNoCancelDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#windowClosing-java.awt.event.WindowEvent-">windowClosing(WindowEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#windowClosing-java.awt.event.WindowEvent-">windowClosing(WindowEvent)</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#windowClosing-java.awt.event.WindowEvent-">windowClosing(WindowEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInDialog.html#windowClosing-java.awt.event.WindowEvent-">windowClosing(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInDialog.html" title="class in ij.plugin.frame">PlugInDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInFrame.html#windowClosing-java.awt.event.WindowEvent-">windowClosing(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInFrame.html" title="class in ij.plugin.frame">PlugInFrame</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#windowClosing-java.awt.event.WindowEvent-">windowClosing(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">Override parent windowClosing method to clean up synchronized
resources on exit.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#windowClosing-java.awt.event.WindowEvent-">windowClosing(WindowEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#windowDeactivated-java.awt.event.WindowEvent-">windowDeactivated(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#windowDeactivated-java.awt.event.WindowEvent-">windowDeactivated(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MessageDialog.html#windowDeactivated-java.awt.event.WindowEvent-">windowDeactivated(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/MessageDialog.html" title="class in ij.gui">MessageDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/YesNoCancelDialog.html#windowDeactivated-java.awt.event.WindowEvent-">windowDeactivated(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui">YesNoCancelDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#windowDeactivated-java.awt.event.WindowEvent-">windowDeactivated(WindowEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#windowDeactivated-java.awt.event.WindowEvent-">windowDeactivated(WindowEvent)</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#windowDeactivated-java.awt.event.WindowEvent-">windowDeactivated(WindowEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInDialog.html#windowDeactivated-java.awt.event.WindowEvent-">windowDeactivated(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInDialog.html" title="class in ij.plugin.frame">PlugInDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInFrame.html#windowDeactivated-java.awt.event.WindowEvent-">windowDeactivated(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInFrame.html" title="class in ij.plugin.frame">PlugInFrame</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#windowDeactivated-java.awt.event.WindowEvent-">windowDeactivated(WindowEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#windowDeiconified-java.awt.event.WindowEvent-">windowDeiconified(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#windowDeiconified-java.awt.event.WindowEvent-">windowDeiconified(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MessageDialog.html#windowDeiconified-java.awt.event.WindowEvent-">windowDeiconified(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/MessageDialog.html" title="class in ij.gui">MessageDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/YesNoCancelDialog.html#windowDeiconified-java.awt.event.WindowEvent-">windowDeiconified(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui">YesNoCancelDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#windowDeiconified-java.awt.event.WindowEvent-">windowDeiconified(WindowEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#windowDeiconified-java.awt.event.WindowEvent-">windowDeiconified(WindowEvent)</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#windowDeiconified-java.awt.event.WindowEvent-">windowDeiconified(WindowEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInDialog.html#windowDeiconified-java.awt.event.WindowEvent-">windowDeiconified(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInDialog.html" title="class in ij.plugin.frame">PlugInDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInFrame.html#windowDeiconified-java.awt.event.WindowEvent-">windowDeiconified(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInFrame.html" title="class in ij.plugin.frame">PlugInFrame</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#windowDeiconified-java.awt.event.WindowEvent-">windowDeiconified(WindowEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#windowIconified-java.awt.event.WindowEvent-">windowIconified(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#windowIconified-java.awt.event.WindowEvent-">windowIconified(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MessageDialog.html#windowIconified-java.awt.event.WindowEvent-">windowIconified(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/MessageDialog.html" title="class in ij.gui">MessageDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/YesNoCancelDialog.html#windowIconified-java.awt.event.WindowEvent-">windowIconified(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui">YesNoCancelDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#windowIconified-java.awt.event.WindowEvent-">windowIconified(WindowEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#windowIconified-java.awt.event.WindowEvent-">windowIconified(WindowEvent)</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#windowIconified-java.awt.event.WindowEvent-">windowIconified(WindowEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInDialog.html#windowIconified-java.awt.event.WindowEvent-">windowIconified(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInDialog.html" title="class in ij.plugin.frame">PlugInDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInFrame.html#windowIconified-java.awt.event.WindowEvent-">windowIconified(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInFrame.html" title="class in ij.plugin.frame">PlugInFrame</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#windowIconified-java.awt.event.WindowEvent-">windowIconified(WindowEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><a href="ij/WindowManager.html" title="class in ij"><span class="typeNameLink">WindowManager</span></a> - Class in <a href="ij/package-summary.html">ij</a></dt>
<dd>
<div class="block">This class consists of static methods used to manage ImageJ's windows.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/GenericDialog.html#windowOpened-java.awt.event.WindowEvent-">windowOpened(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/GenericDialog.html" title="class in ij.gui">GenericDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#windowOpened-java.awt.event.WindowEvent-">windowOpened(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/MessageDialog.html#windowOpened-java.awt.event.WindowEvent-">windowOpened(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/MessageDialog.html" title="class in ij.gui">MessageDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/YesNoCancelDialog.html#windowOpened-java.awt.event.WindowEvent-">windowOpened(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui">YesNoCancelDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/ImageJ.html#windowOpened-java.awt.event.WindowEvent-">windowOpened(WindowEvent)</a></span> - Method in class ij.<a href="ij/ImageJ.html" title="class in ij">ImageJ</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/FunctionFinder.html#windowOpened-java.awt.event.WindowEvent-">windowOpened(WindowEvent)</a></span> - Method in class ij.macro.<a href="ij/macro/FunctionFinder.html" title="class in ij.macro">FunctionFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/CommandFinder.html#windowOpened-java.awt.event.WindowEvent-">windowOpened(WindowEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/CommandFinder.html" title="class in ij.plugin">CommandFinder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInDialog.html#windowOpened-java.awt.event.WindowEvent-">windowOpened(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInDialog.html" title="class in ij.plugin.frame">PlugInDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/PlugInFrame.html#windowOpened-java.awt.event.WindowEvent-">windowOpened(WindowEvent)</a></span> - Method in class ij.plugin.frame.<a href="ij/plugin/frame/PlugInFrame.html" title="class in ij.plugin.frame">PlugInFrame</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Orthogonal_Views.html#windowOpened-java.awt.event.WindowEvent-">windowOpened(WindowEvent)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Orthogonal_Views.html" title="class in ij.plugin">Orthogonal_Views</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/WindowOrganizer.html" title="class in ij.plugin"><span class="typeNameLink">WindowOrganizer</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This class implements the Window menu's "Show All", "Main Window", "Cascade" and "Tile" commands.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/WindowOrganizer.html#WindowOrganizer--">WindowOrganizer()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/WindowOrganizer.html" title="class in ij.plugin">WindowOrganizer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageWindow.html#windowStateChanged-java.awt.event.WindowEvent-">windowStateChanged(WindowEvent)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageWindow.html" title="class in ij.gui">ImageWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#wipeBack--">wipeBack()</a></span> - Method in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#wList">wList</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd>
<div class="block">List of currently displayed windows retrieved from ImageJ
window manager.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#WORD">WORD</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/IJ.html#write-java.lang.String-">write(String)</a></span> - Static method in class ij.<a href="ij/IJ.html" title="class in ij">IJ</a></dt>
<dd>
<div class="block"><span class="deprecatedLabel">Deprecated.</span>
<div class="block"><span class="deprecationComment">replaced by IJ.log(), ResultsTable.setResult() and TextWindow.append().
There are examples at
http://imagej.nih.gov/ij/plugins/sine-cosine.html</span></div>
</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/ImageWriter.html#write-java.io.OutputStream-">write(OutputStream)</a></span> - Method in class ij.io.<a href="ij/io/ImageWriter.html" title="class in ij.io">ImageWriter</a></dt>
<dd>
<div class="block">Writes the image to the specified OutputStream.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/LogStream.html#write-byte:A-">write(byte[])</a></span> - Method in class ij.io.<a href="ij/io/LogStream.html" title="class in ij.io">LogStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/LogStream.html#write-byte:A-int-int-">write(byte[], int, int)</a></span> - Method in class ij.io.<a href="ij/io/LogStream.html" title="class in ij.io">LogStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/LogStream.html#write-int-">write(int)</a></span> - Method in class ij.io.<a href="ij/io/LogStream.html" title="class in ij.io">LogStream</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiEncoder.html#write-ij.gui.Roi-">write(Roi)</a></span> - Method in class ij.io.<a href="ij/io/RoiEncoder.html" title="class in ij.io">RoiEncoder</a></dt>
<dd>
<div class="block">Save the Roi to the file of stream.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TextEncoder.html#write-java.io.DataOutputStream-">write(DataOutputStream)</a></span> - Method in class ij.io.<a href="ij/io/TextEncoder.html" title="class in ij.io">TextEncoder</a></dt>
<dd>
<div class="block">Saves the image as a tab-delimited text file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffEncoder.html#write-java.io.OutputStream-">write(OutputStream)</a></span> - Method in class ij.io.<a href="ij/io/TiffEncoder.html" title="class in ij.io">TiffEncoder</a></dt>
<dd>
<div class="block">Saves the image as a TIFF file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffEncoder.html#write-java.io.DataOutputStream-">write(DataOutputStream)</a></span> - Method in class ij.io.<a href="ij/io/TiffEncoder.html" title="class in ij.io">TiffEncoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/macro/MacroConstants.html#WRITE">WRITE</a></span> - Static variable in interface ij.macro.<a href="ij/macro/MacroConstants.html" title="interface in ij.macro">MacroConstants</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/AVI_Writer.html#writeImage-ij.ImagePlus-java.lang.String-int-int-">writeImage(ImagePlus, String, int, int)</a></span> - Method in class ij.plugin.filter.<a href="ij/plugin/filter/AVI_Writer.html" title="class in ij.plugin.filter">AVI_Writer</a></dt>
<dd>
<div class="block">Writes an ImagePlus (stack) as AVI file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/PNG_Writer.html#writeImage-ij.ImagePlus-java.lang.String-int-">writeImage(ImagePlus, String, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/PNG_Writer.html" title="class in ij.plugin">PNG_Writer</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/Writer.html" title="class in ij.plugin.filter"><span class="typeNameLink">Writer</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">This plugin saves an image in tiff, gif, jpeg, bmp, png, text or raw format.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/Writer.html#Writer--">Writer()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/Writer.html" title="class in ij.plugin.filter">Writer</a></dt>
<dd> </dd>
</dl>
<a name="I:X">
<!-- -->
</a>
<h2 class="title">X</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#X">X</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Display points using an X-shaped mark.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotWindow.html#X">X</a></span> - Static variable in class ij.gui.<a href="ij/gui/PlotWindow.html" title="class in ij.gui">PlotWindow</a></dt>
<dd>
<div class="block">Display points using an X-shaped mark.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#x">x</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#x1">x1</a></span> - Variable in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#X1">X1</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#x1d">x1d</a></span> - Variable in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#x1R">x1R</a></span> - Variable in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#x2">x2</a></span> - Variable in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#X2">X2</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#x2d">x2d</a></span> - Variable in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#x2R">x2R</a></span> - Variable in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#X_CENTER_OF_MASS">X_CENTER_OF_MASS</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#X_CENTROID">X_CENTROID</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#X_FORCE2GRID">X_FORCE2GRID</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">flag for forcing frame to coincide with the grid/ticks in x direction (results in unused space)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#X_GRID">X_GRID</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">flag for drawing vertical grid lines for x axis</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#X_LOG_NUMBERS">X_LOG_NUMBERS</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">flag for logarithmic x-axis</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#X_LOG_TICKS">X_LOG_TICKS</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">flag for ticks (major and minor, if space) on logarithmic x axis</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#X_MINOR_TICKS">X_MINOR_TICKS</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">flag for drawing minor ticks on linear (non-logarithmic) x axis</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#X_NUMBERS">X_NUMBERS</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">flag for numeric labels of x-axis ticks</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#X_RANGE">X_RANGE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Flag for addressing the x axis, for copying from a template: copy/write x axis range.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#X_RESOLUTION">X_RESOLUTION</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#X_TICKS">X_TICKS</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">flag for drawing major ticks on linear (non-logarithmic) x axis</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/EllipseFitter.html#xCenter">xCenter</a></span> - Variable in class ij.process.<a href="ij/process/EllipseFitter.html" title="class in ij.process">EllipseFitter</a></dt>
<dd>
<div class="block">X centroid</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#xCenterOfMass">xCenterOfMass</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#xCentroid">xCentroid</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/EllipseFitter.html#xCoordinates">xCoordinates</a></span> - Variable in class ij.process.<a href="ij/process/EllipseFitter.html" title="class in ij.process">EllipseFitter</a></dt>
<dd>
<div class="block">Initialized by makeRoi()</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#XD">XD</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#xInc">xInc</a></span> - Variable in class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#XINC">XINC</a></span> - Static variable in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#XINC">XINC</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/WaitForUserDialog.html#xloc">xloc</a></span> - Static variable in class ij.gui.<a href="ij/gui/WaitForUserDialog.html" title="class in ij.gui">WaitForUserDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#xMax">xMax</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#xMax">xMax</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#xMin">xMin</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#xMouse">xMouse</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#xMouseStart">xMouseStart</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ShapeRoi.html#xor-ij.gui.ShapeRoi-">xor(ShapeRoi)</a></span> - Method in class ij.gui.<a href="ij/gui/ShapeRoi.html" title="class in ij.gui">ShapeRoi</a></dt>
<dd>
<div class="block">Unary exclusive or operator.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/Blitter.html#XOR">XOR</a></span> - Static variable in interface ij.process.<a href="ij/process/Blitter.html" title="interface in ij.process">Blitter</a></dt>
<dd>
<div class="block">dst=dst XOR src</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatProcessor.html#xor-int-">xor(int)</a></span> - Method in class ij.process.<a href="ij/process/FloatProcessor.html" title="class in ij.process">FloatProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#xor-int-">xor(int)</a></span> - Method in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd>
<div class="block">Binary exclusive OR of each pixel in the image or ROI with 'value'.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ShortProcessor.html#xor-int-">xor(int)</a></span> - Method in class ij.process.<a href="ij/process/ShortProcessor.html" title="class in ij.process">ShortProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#xOrigin">xOrigin</a></span> - Variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">X origin in pixels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#xp">xp</a></span> - Variable in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#xp2">xp2</a></span> - Variable in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#xpf">xpf</a></span> - Variable in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Wand.html#xpoints">xpoints</a></span> - Variable in class ij.gui.<a href="ij/gui/Wand.html" title="class in ij.gui">Wand</a></dt>
<dd>
<div class="block">The x-coordinates of the points in the outline.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatPolygon.html#xpoints">xpoints</a></span> - Variable in class ij.process.<a href="ij/process/FloatPolygon.html" title="class in ij.process">FloatPolygon</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#xSpline">xSpline</a></span> - Variable in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#xSrcStart">xSrcStart</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#xstart">xstart</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Used internally by AnalyzeParticles</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#xValues">xValues</a></span> - Variable in class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/XY_Reader.html" title="class in ij.plugin"><span class="typeNameLink">XY_Reader</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the File/Import/XY Coordinates command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/XY_Reader.html#XY_Reader--">XY_Reader()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/XY_Reader.html" title="class in ij.plugin">XY_Reader</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/XYCoordinates.html" title="class in ij.plugin"><span class="typeNameLink">XYCoordinates</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Writes the XY coordinates and pixel values of all non-background
pixels to a tab-delimited text file.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/XYCoordinates.html#XYCoordinates--">XYCoordinates()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/XYCoordinates.html" title="class in ij.plugin">XYCoordinates</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/filter/XYWriter.html" title="class in ij.plugin.filter"><span class="typeNameLink">XYWriter</span></a> - Class in <a href="ij/plugin/filter/package-summary.html">ij.plugin.filter</a></dt>
<dd>
<div class="block">Saves the XY coordinates of the current ROI boundary.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/filter/XYWriter.html#XYWriter--">XYWriter()</a></span> - Constructor for class ij.plugin.filter.<a href="ij/plugin/filter/XYWriter.html" title="class in ij.plugin.filter">XYWriter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#xyYtoXYZ-double-double-double-">xyYtoXYZ(double, double, double)</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#xyYtoXYZ-double:A-">xyYtoXYZ(double[])</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#XYZtoLAB-double-double-double-">XYZtoLAB(double, double, double)</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">Convert XYZ to LAB.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#XYZtoLAB-double:A-">XYZtoLAB(double[])</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">Convert XYZ to LAB.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#XYZtoRGB-double-double-double-">XYZtoRGB(double, double, double)</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">Convert XYZ to RGB.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#XYZtoRGB-double:A-">XYZtoRGB(double[])</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd>
<div class="block">Convert XYZ to RGB</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#XYZtoxyY-double-double-double-">XYZtoxyY(double, double, double)</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ColorSpaceConverter.html#XYZtoxyY-double:A-">XYZtoxyY(double[])</a></span> - Method in class ij.process.<a href="ij/process/ColorSpaceConverter.html" title="class in ij.process">ColorSpaceConverter</a></dt>
<dd> </dd>
</dl>
<a name="I:Y">
<!-- -->
</a>
<h2 class="title">Y</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/SyncWindows.html#y">y</a></span> - Variable in class ij.plugin.frame.<a href="ij/plugin/frame/SyncWindows.html" title="class in ij.plugin.frame">SyncWindows</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#y1">y1</a></span> - Variable in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#Y1">Y1</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#y1d">y1d</a></span> - Variable in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#y1R">y1R</a></span> - Variable in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#y2">y2</a></span> - Variable in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#Y2">Y2</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#y2d">y2d</a></span> - Variable in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Line.html#y2R">y2R</a></span> - Variable in class ij.gui.<a href="ij/gui/Line.html" title="class in ij.gui">Line</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#Y_CENTER_OF_MASS">Y_CENTER_OF_MASS</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/ResultsTable.html#Y_CENTROID">Y_CENTROID</a></span> - Static variable in class ij.measure.<a href="ij/measure/ResultsTable.html" title="class in ij.measure">ResultsTable</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#Y_FORCE2GRID">Y_FORCE2GRID</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">flag for forcing frame to coincide with the grid/ticks in y direction (results in unused space)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#Y_GRID">Y_GRID</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">flag for drawing horizontal grid lines for y axis</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#Y_LOG_NUMBERS">Y_LOG_NUMBERS</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">flag for logarithmic y axis</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#Y_LOG_TICKS">Y_LOG_TICKS</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">flag for ticks (major and minor, if space) on logarithmic y axis</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#Y_MINOR_TICKS">Y_MINOR_TICKS</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">flag for drawing minor ticks on linear (non-logarithmic) y axis</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#Y_NUMBERS">Y_NUMBERS</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">flag for numeric labels of x-axis ticks</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#Y_RANGE">Y_RANGE</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">Flag for addressing the y axis, for copying from a template: copy/write y axis range</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/TiffDecoder.html#Y_RESOLUTION">Y_RESOLUTION</a></span> - Static variable in class ij.io.<a href="ij/io/TiffDecoder.html" title="class in ij.io">TiffDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Plot.html#Y_TICKS">Y_TICKS</a></span> - Static variable in class ij.gui.<a href="ij/gui/Plot.html" title="class in ij.gui">Plot</a></dt>
<dd>
<div class="block">flag for drawing major ticks on linear (non-logarithmic) y axis</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/EllipseFitter.html#yCenter">yCenter</a></span> - Variable in class ij.process.<a href="ij/process/EllipseFitter.html" title="class in ij.process">EllipseFitter</a></dt>
<dd>
<div class="block">X centroid</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#yCenterOfMass">yCenterOfMass</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#yCentroid">yCentroid</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/EllipseFitter.html#yCoordinates">yCoordinates</a></span> - Variable in class ij.process.<a href="ij/process/EllipseFitter.html" title="class in ij.process">EllipseFitter</a></dt>
<dd>
<div class="block">Initialized by makeRoi()</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#YD">YD</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui"><span class="typeNameLink">YesNoCancelDialog</span></a> - Class in <a href="ij/gui/package-summary.html">ij.gui</a></dt>
<dd>
<div class="block">A modal dialog box with a one line message and
"Yes", "No" and "Cancel" buttons.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/YesNoCancelDialog.html#YesNoCancelDialog-java.awt.Frame-java.lang.String-java.lang.String-">YesNoCancelDialog(Frame, String, String)</a></span> - Constructor for class ij.gui.<a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui">YesNoCancelDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/YesNoCancelDialog.html#YesNoCancelDialog-java.awt.Frame-java.lang.String-java.lang.String-java.lang.String-java.lang.String-">YesNoCancelDialog(Frame, String, String, String, String)</a></span> - Constructor for class ij.gui.<a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui">YesNoCancelDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/YesNoCancelDialog.html#yesPressed--">yesPressed()</a></span> - Method in class ij.gui.<a href="ij/gui/YesNoCancelDialog.html" title="class in ij.gui">YesNoCancelDialog</a></dt>
<dd>
<div class="block">Returns true if the user dismissed dialog by pressing "Yes".</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/frame/Editor.html#YINC">YINC</a></span> - Static variable in class ij.plugin.frame.<a href="ij/plugin/frame/Editor.html" title="class in ij.plugin.frame">Editor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/MacroInstaller.html#YINC">YINC</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/MacroInstaller.html" title="class in ij.plugin">MacroInstaller</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ProfilePlot.html#yLabel">yLabel</a></span> - Variable in class ij.gui.<a href="ij/gui/ProfilePlot.html" title="class in ij.gui">ProfilePlot</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/WaitForUserDialog.html#yloc">yloc</a></span> - Static variable in class ij.gui.<a href="ij/gui/WaitForUserDialog.html" title="class in ij.gui">WaitForUserDialog</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/HistogramWindow.html#yMax">yMax</a></span> - Variable in class ij.gui.<a href="ij/gui/HistogramWindow.html" title="class in ij.gui">HistogramWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Roi.html#yMax">yMax</a></span> - Variable in class ij.gui.<a href="ij/gui/Roi.html" title="class in ij.gui">Roi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#yMax">yMax</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageProcessor.html#yMin">yMin</a></span> - Variable in class ij.process.<a href="ij/process/ImageProcessor.html" title="class in ij.process">ImageProcessor</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#yMouse">yMouse</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#yMouseStart">yMouseStart</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#yOrigin">yOrigin</a></span> - Variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Y origin in pixels.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#yp">yp</a></span> - Variable in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#yp2">yp2</a></span> - Variable in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#ypf">ypf</a></span> - Variable in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/Wand.html#ypoints">ypoints</a></span> - Variable in class ij.gui.<a href="ij/gui/Wand.html" title="class in ij.gui">Wand</a></dt>
<dd>
<div class="block">The y-coordinates of the points in the outline.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/process/FloatPolygon.html#ypoints">ypoints</a></span> - Variable in class ij.process.<a href="ij/process/FloatPolygon.html" title="class in ij.process">FloatPolygon</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/PolygonRoi.html#ySpline">ySpline</a></span> - Variable in class ij.gui.<a href="ij/gui/PolygonRoi.html" title="class in ij.gui">PolygonRoi</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#ySrcStart">ySrcStart</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/process/ImageStatistics.html#ystart">ystart</a></span> - Variable in class ij.process.<a href="ij/process/ImageStatistics.html" title="class in ij.process">ImageStatistics</a></dt>
<dd>
<div class="block">Used internally by AnalyzeParticles</div>
</dd>
</dl>
<a name="I:Z">
<!-- -->
</a>
<h2 class="title">Z</h2>
<dl>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#Z_POSITION">Z_POSITION</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><a href="ij/plugin/ZAxisProfiler.html" title="class in ij.plugin"><span class="typeNameLink">ZAxisProfiler</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">Implements the Image/Stacks/Plot Z-axis Profile command,
which plots the selection mean gray value versus slice number.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZAxisProfiler.html#ZAxisProfiler--">ZAxisProfiler()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ZAxisProfiler.html" title="class in ij.plugin">ZAxisProfiler</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackConverter.html#ZCT">ZCT</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/HyperStackConverter.html" title="class in ij.plugin">HyperStackConverter</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/RoiDecoder.html#ZERO_TRANSPARENT">ZERO_TRANSPARENT</a></span> - Static variable in class ij.io.<a href="ij/io/RoiDecoder.html" title="class in ij.io">RoiDecoder</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#zeroClip--">zeroClip()</a></span> - Method in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Returns true if zero clipping is enabled.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#ZIP">ZIP</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/Opener.html#ZIP">ZIP</a></span> - Static variable in class ij.io.<a href="ij/io/Opener.html" title="class in ij.io">Opener</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/FileInfo.html#ZIP_ARCHIVE">ZIP_ARCHIVE</a></span> - Static variable in class ij.io.<a href="ij/io/FileInfo.html" title="class in ij.io">FileInfo</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/io/ImageReader.html#zipUncompress-byte:A-">zipUncompress(byte[])</a></span> - Method in class ij.io.<a href="ij/io/ImageReader.html" title="class in ij.io">ImageReader</a></dt>
<dd>
<div class="block">TIFF Adobe ZIP support contributed by Jason Newton.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#zoom-java.lang.String-">zoom(String)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">Zoom operations that are handled by ij.plugin.Zoom</div>
</dd>
<dt><a href="ij/plugin/Zoom.html" title="class in ij.plugin"><span class="typeNameLink">Zoom</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin implements the commands in the Image/Zoom submenu.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Zoom.html#Zoom--">Zoom()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/Zoom.html" title="class in ij.plugin">Zoom</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#zoom100Percent--">zoom100Percent()</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Implements the Image/Zoom/View 100% command.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#zoom100Percent--">zoom100Percent()</a></span> - Method in class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">Implements the Image/Zoom/View 100% command: Sets the original frame size as specified
in Edit/Options/Plots (unless the plot is frozen)</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#zoomIn-int-int-">zoomIn(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Zooms in by making the window bigger.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#zoomIn-int-int-">zoomIn(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">Zooms in by modifying the plot range; sx and sy are screen coordinates</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#zoomOut-int-int-">zoomOut(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Zooms out by making the source rectangle (srcRect)
larger and centering it on (x,y).</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/PlotCanvas.html#zoomOut-int-int-">zoomOut(int, int)</a></span> - Method in class ij.gui.<a href="ij/gui/PlotCanvas.html" title="class in ij.gui">PlotCanvas</a></dt>
<dd>
<div class="block">Zooms out by modifying the plot range; sx and sy are screen coordinates</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#zoomTargetOX">zoomTargetOX</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd>
<div class="block">Image (=offscreen) coordinates where the cursor was moved to for zooming</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/gui/ImageCanvas.html#zoomTargetOY">zoomTargetOY</a></span> - Variable in class ij.gui.<a href="ij/gui/ImageCanvas.html" title="class in ij.gui">ImageCanvas</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/measure/Calibration.html#zOrigin">zOrigin</a></span> - Variable in class ij.measure.<a href="ij/measure/Calibration.html" title="class in ij.measure">Calibration</a></dt>
<dd>
<div class="block">Z origin in pixels.</div>
</dd>
<dt><a href="ij/plugin/ZProjector.html" title="class in ij.plugin"><span class="typeNameLink">ZProjector</span></a> - Class in <a href="ij/plugin/package-summary.html">ij.plugin</a></dt>
<dd>
<div class="block">This plugin performs a z-projection of the input stack.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#ZProjector--">ZProjector()</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/ZProjector.html#ZProjector-ij.ImagePlus-">ZProjector(ImagePlus)</a></span> - Constructor for class ij.plugin.<a href="ij/plugin/ZProjector.html" title="class in ij.plugin">ZProjector</a></dt>
<dd>
<div class="block">Construction of ZProjector with image to be projected.</div>
</dd>
<dt><span class="memberNameLink"><a href="ij/plugin/Resizer.html#zScale-ij.ImagePlus-int-int-">zScale(ImagePlus, int, int)</a></span> - Method in class ij.plugin.<a href="ij/plugin/Resizer.html" title="class in ij.plugin">Resizer</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/gui/StackWindow.html#zSelector">zSelector</a></span> - Variable in class ij.gui.<a href="ij/gui/StackWindow.html" title="class in ij.gui">StackWindow</a></dt>
<dd> </dd>
<dt><span class="memberNameLink"><a href="ij/plugin/HyperStackConverter.html#ZTC">ZTC</a></span> - Static variable in class ij.plugin.<a href="ij/plugin/HyperStackConverter.html" title="class in ij.plugin">HyperStackConverter</a></dt>
<dd> </dd>
</dl>
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