/etc/mobyle/programs/Env/protdbs.xml is in mobyle-programs 5.1.2-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 | <vlist>
<velem undef="1">
<value>null</value>
<label>Choose a database</label>
</velem>
<velem>
<value>alupro</value>
<label>Select Alu repeats from REPBASE</label>
</velem>
<velem>
<value>nrprot</value>
<label>nrprot: NCBI non-redundant Genbank CDS translations+PDB+Swissprot+PIR</label>
</velem>
<velem>
<value>pdb</value>
<label>Protein Data Bank</label>
</velem>
<velem>
<value>refseqp_release</value>
<label>NCBI Reference Sequence (RefSeq) Database last release</label>
</velem>
<velem>
<value>refseqp_udpate</value>
<label>NCBI Reference Sequence (RefSeq) updates</label>
</velem>
<velem>
<value>refseqp</value>
<label>RefSeq (last release + updates)</label>
</velem>
<velem>
<value>sbase</value>
<label>sbase: annotated domains sequences</label>
</velem>
<velem>
<value>uniprot</value>
<label>uniprot: Universal Protein Resource (sprot+treml)</label>
</velem>
<velem>
<value>uniprot_sprot</value>
<label>uniprot_sprot: Universal Protein Resource (SwissProt part)</label>
</velem>
<velem>
<value>uniprot_trembl</value>
<label>uniprot_trembl: Universal Protein Resource (TrEmbl part)</label>
</velem>
<velem>
<value>uniref90</value>
<label>Clustered sets of sequences from UniProt Knowledgebase</label>
</velem>
<velem>
<value>vipr_aa</value>
<label>Virus Pathogen Resource</label>
</velem>
<velem>
<value>wgspro</value>
<label>Genbank : Whole Genome Shotgun</label>
</velem>
</vlist>
|