/var/lib/mobyle/programs/html4blast.xml is in mobyle-programs 5.1.2-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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<!-- XML Authors: Corinne Maufrais, Nicolas Joly and Bertrand Neron, -->
<!-- 'Biological Software and Databases' Group, Institut Pasteur, Paris. -->
<!-- Distributed under LGPLv2 License. Please refer to the COPYING.LIB document. -->
<program>
<head>
<name>html4blast</name>
<version>1.7a</version>
<doc>
<title>html4blast</title>
<description>
<text lang="en">HTML blast results formatter</text>
</description>
<authors>Nicolas Joly</authors>
<sourcelink>ftp://ftp.pasteur.fr/pub/gensoft/projects/html4blast/</sourcelink>
</doc>
<category>database:search:display</category>
</head>
<parameters>
<parameter iscommand="1" ishidden="1">
<name>html4blast</name>
<type>
<datatype>
<class>String</class>
</datatype>
</type>
<format>
<code proglang="perl">"html4blast"</code>
<code proglang="python">"html4blast"</code>
</format>
<argpos>1</argpos>
</parameter>
<parameter ismandatory="1" issimple="1">
<name>input</name>
<prompt lang="en">Blast input file</prompt>
<type>
<datatype>
<class>BlastTextReport</class>
<superclass>Report</superclass>
</datatype>
</type>
<format>
<code proglang="perl">" $value"</code>
<code proglang="python">" %s" % str(value)</code>
</format>
<argpos>10</argpos>
</parameter>
<parameter>
<name>links</name>
<prompt lang="en">Database links</prompt>
<type>
<datatype>
<class>Choice</class>
</datatype>
</type>
<vdef>
<value>golden</value>
</vdef>
<flist>
<felem>
<value>none</value>
<label>No hypertext link (-n)</label>
<code proglang="perl">" -n"</code>
<code proglang="python">" -n"</code>
</felem>
<felem>
<value>golden</value>
<label>Golden links</label>
<code proglang="perl">""</code>
<code proglang="python">""</code>
</felem>
<felem>
<value>srs</value>
<label>Srs links (-s)</label>
<code proglang="perl">" -s"</code>
<code proglang="python">" -s"</code>
</felem>
<felem>
<value>extern</value>
<label>External web sites links (-e)</label>
<code proglang="perl">" -e"</code>
<code proglang="python">" -e"</code>
</felem>
</flist>
<argpos>2</argpos>
</parameter>
<parameter>
<name>graph</name>
<prompt lang="en">Graphical alignment summary (-g)</prompt>
<type>
<datatype>
<class>Boolean</class>
</datatype>
</type>
<vdef>
<value>1</value>
</vdef>
<format>
<code proglang="perl">($value) ? " -g" : ""</code>
<code proglang="python">("" , " -g")[ value ]</code>
</format>
<argpos>3</argpos>
</parameter>
<parameter>
<name>hspline</name>
<prompt lang="en">Draw one HSP per graphic line (-l)</prompt>
<type>
<datatype>
<class>Boolean</class>
</datatype>
</type>
<precond>
<code proglang="perl">$graph</code>
<code proglang="python">graph</code>
</precond>
<vdef>
<value>0</value>
</vdef>
<format>
<code proglang="perl">($value) ? " -l" : ""</code>
<code proglang="python">("" , " -l")[ value ]</code>
</format>
<argpos>4</argpos>
</parameter>
<parameter>
<name>queryimagename</name>
<prompt lang="en">Generate query based images names (-q)</prompt>
<type>
<datatype>
<class>Boolean</class>
</datatype>
</type>
<precond>
<code proglang="perl">$graph</code>
<code proglang="python">graph</code>
</precond>
<vdef>
<value>0</value>
</vdef>
<format>
<code proglang="perl">($value) ? " -q" : ""</code>
<code proglang="python">("" , " -q")[ value ]</code>
</format>
<argpos>5</argpos>
</parameter>
<parameter>
<name>outfile</name>
<prompt lang="en">Outfile name (-o)</prompt>
<type>
<datatype>
<class>Filename</class>
</datatype>
</type>
<vdef>
<value>blast.html</value>
</vdef>
<format>
<code proglang="perl">(defined $value and $value ne $vdef) ? " -o $value" : ""</code>
<code proglang="python">("", " -o " + str(value))[value is not None and value != vdef]</code>
</format>
<argpos>6</argpos>
</parameter>
<parameter isout="1">
<name>output</name>
<prompt lang="en">Output file</prompt>
<type>
<datatype>
<class>BlastHtmlReport</class>
<superclass>Report</superclass>
</datatype>
</type>
<filenames>
<code proglang="perl">$outfile</code>
<code proglang="python">outfile</code>
</filenames>
</parameter>
<parameter isout="1" ishidden="1">
<name>image</name>
<type>
<datatype>
<class>Picture</class>
<superclass>Binary</superclass>
</datatype>
</type>
<precond>
<code proglang="perl">$graph</code>
<code proglang="python">graph</code>
</precond>
<filenames>
<code proglang="perl">"*.png"</code>
<code proglang="perl">"*.gif"</code>
<code proglang="python">"*.png"</code>
<code proglang="python">"*.gif"</code>
</filenames>
</parameter>
</parameters>
</program>
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