/usr/lib/python2.7/dist-packages/ginga/trcalc.py is in python-ginga 2.7.0-2.
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# trcalc.py -- transformation calculations for image data
#
# This is open-source software licensed under a BSD license.
# Please see the file LICENSE.txt for details.
#
import math
import numpy as np
interpolation_methods = ['basic']
def use(pkgname):
global interpolation_methods
global have_opencv, cv2, cv2_resize
global have_opencl, trcalc_cl
if pkgname == 'opencv':
import cv2
cv2_resize = {
'nearest': cv2.INTER_NEAREST,
'linear': cv2.INTER_LINEAR,
'area': cv2.INTER_AREA,
'bicubic': cv2.INTER_CUBIC,
'lanczos': cv2.INTER_LANCZOS4,
}
have_opencv = True
if 'nearest' not in interpolation_methods:
interpolation_methods = list(set(['basic'] +
list(cv2_resize.keys())))
interpolation_methods.sort()
elif pkgname == 'opencl':
try:
from ginga.opencl import CL
have_opencl = True
trcalc_cl = CL.CL('trcalc.cl')
except Exception as e:
raise ImportError(e)
have_opencv = False
try:
# optional opencv package speeds up certain operations, especially
# rotation
# TEMP: opencv broken on older anaconda mac (importing causes segv)
# --> temporarily disable, can enable using use() function above
#use('opencv')
pass
except ImportError:
pass
have_opencl = False
trcalc_cl = None
try:
# optional opencl package speeds up certain operations, especially
# rotation
# TEMP: pyopencl prompts users if it can't determine which device
# to use for acceleration.
# --> temporarily disable, can enable using use() function above
#use('opencl')
pass
except ImportError:
pass
have_numexpr = False
try:
# optional numexpr package speeds up certain combined numpy array
# operations, especially rotation
import numexpr as ne
have_numexpr = True
except ImportError:
pass
# For testing
#have_numexpr = False
#have_opencv = False
#have_opencl = False
def get_center(data_np):
ht, wd = data_np.shape[:2]
ctr_x = wd // 2
ctr_y = ht // 2
return (ctr_x, ctr_y)
def rotate_pt(x_arr, y_arr, theta_deg, xoff=0, yoff=0):
"""
Rotate an array of points (x_arr, y_arr) by theta_deg offsetted
from a center point by (xoff, yoff).
"""
# TODO: use opencv acceleration if available
a_arr = x_arr - xoff
b_arr = y_arr - yoff
cos_t = np.cos(np.radians(theta_deg))
sin_t = np.sin(np.radians(theta_deg))
ap = (a_arr * cos_t) - (b_arr * sin_t)
bp = (a_arr * sin_t) + (b_arr * cos_t)
return np.asarray((ap + xoff, bp + yoff))
rotate_arr = rotate_pt
def rotate_coord(coord, thetas, offsets):
arr_t = np.asarray(coord).T
# TODO: handle dimensional rotation N>2
arr = rotate_pt(arr_t[0], arr_t[1], thetas[0],
xoff=offsets[0], yoff=offsets[1])
if len(arr_t) > 2:
# just copy unrotated Z coords
arr = np.asarray([arr[0], arr[1]] + list(arr_t[2:]))
return arr.T
def rotate_clip(data_np, theta_deg, rotctr_x=None, rotctr_y=None,
out=None, use_opencl=True, logger=None):
"""
Rotate numpy array `data_np` by `theta_deg` around rotation center
(rotctr_x, rotctr_y). If the rotation center is omitted it defaults
to the center of the array.
No adjustment is done to the data array beforehand, so the result will
be clipped according to the size of the array (the output array will be
the same size as the input array).
"""
# If there is no rotation, then we are done
if math.fmod(theta_deg, 360.0) == 0.0:
return data_np
ht, wd = data_np.shape[:2]
if rotctr_x is None:
rotctr_x = wd // 2
if rotctr_y is None:
rotctr_y = ht // 2
if have_opencv:
if logger is not None:
logger.debug("rotating with OpenCv")
# opencv is fastest
M = cv2.getRotationMatrix2D((rotctr_y, rotctr_x), theta_deg, 1)
if out is not None:
out[:, :, ...] = cv2.warpAffine(data_np, M, (wd, ht))
newdata = out
else:
newdata = cv2.warpAffine(data_np, M, (wd, ht))
new_ht, new_wd = newdata.shape[:2]
assert (wd == new_wd) and (ht == new_ht), \
Exception("rotated cutout is %dx%d original=%dx%d" % (
new_wd, new_ht, wd, ht))
elif have_opencl and use_opencl:
if logger is not None:
logger.debug("rotating with OpenCL")
# opencl is very close, sometimes better, sometimes worse
if (data_np.dtype == np.uint8) and (len(data_np.shape) == 3):
# special case for 3D RGB images
newdata = trcalc_cl.rotate_clip_uint32(data_np, theta_deg,
rotctr_x, rotctr_y,
out=out)
else:
newdata = trcalc_cl.rotate_clip(data_np, theta_deg,
rotctr_x, rotctr_y,
out=out)
else:
if logger is not None:
logger.debug("rotating with numpy")
yi, xi = np.mgrid[0:ht, 0:wd]
xi -= rotctr_x
yi -= rotctr_y
cos_t = np.cos(np.radians(theta_deg))
sin_t = np.sin(np.radians(theta_deg))
if have_numexpr:
ap = ne.evaluate("(xi * cos_t) - (yi * sin_t) + rotctr_x")
bp = ne.evaluate("(xi * sin_t) + (yi * cos_t) + rotctr_y")
else:
ap = (xi * cos_t) - (yi * sin_t) + rotctr_x
bp = (xi * sin_t) + (yi * cos_t) + rotctr_y
#ap = np.rint(ap).astype('int').clip(0, wd-1)
#bp = np.rint(bp).astype('int').clip(0, ht-1)
# Optomizations to reuse existing intermediate arrays
np.rint(ap, out=ap)
ap = ap.astype('int')
ap.clip(0, wd - 1, out=ap)
np.rint(bp, out=bp)
bp = bp.astype('int')
bp.clip(0, ht - 1, out=bp)
if out is not None:
out[:, :, ...] = data_np[bp, ap]
newdata = out
else:
newdata = data_np[bp, ap]
new_ht, new_wd = newdata.shape[:2]
assert (wd == new_wd) and (ht == new_ht), \
Exception("rotated cutout is %dx%d original=%dx%d" % (
new_wd, new_ht, wd, ht))
return newdata
def rotate(data_np, theta_deg, rotctr_x=None, rotctr_y=None, pad=20,
use_opencl=True, logger=None):
# If there is no rotation, then we are done
if math.fmod(theta_deg, 360.0) == 0.0:
return data_np
ht, wd = data_np.shape[:2]
ocx, ocy = wd // 2, ht // 2
# Make a square with room to rotate
side = int(math.sqrt(wd**2 + ht**2) + pad)
new_wd = new_ht = side
dims = (new_ht, new_wd) + data_np.shape[2:]
# Find center of new data array
ncx, ncy = new_wd // 2, new_ht // 2
if have_opencl and use_opencl:
if logger is not None:
logger.debug("rotating with OpenCL")
# find offsets of old image in new image
dx, dy = ncx - ocx, ncy - ocy
newdata = trcalc_cl.rotate(data_np, theta_deg,
rotctr_x=rotctr_x, rotctr_y=rotctr_y,
clip_val=0, out=None,
out_wd=new_wd, out_ht=new_ht,
out_dx=dx, out_dy=dy)
else:
# Overlay the old image on the new (blank) image
ldx, rdx = min(ocx, ncx), min(wd - ocx, ncx)
bdy, tdy = min(ocy, ncy), min(ht - ocy, ncy)
# TODO: fill with a different value?
newdata = np.zeros(dims, dtype=data_np.dtype)
newdata[ncy - bdy:ncy + tdy, ncx - ldx:ncx + rdx] = \
data_np[ocy - bdy:ocy + tdy, ocx - ldx:ocx + rdx]
# Now rotate with clip as usual
newdata = rotate_clip(newdata, theta_deg,
rotctr_x=rotctr_x, rotctr_y=rotctr_y,
out=newdata)
return newdata
def get_scaled_cutout_wdht_view(shp, x1, y1, x2, y2, new_wd, new_ht):
"""
Like get_scaled_cutout_wdht, but returns the view/slice to extract
from an image instead of the extraction itself.
"""
x1, y1, x2, y2 = int(x1), int(y1), int(x2), int(y2)
new_wd, new_ht = int(new_wd), int(new_ht)
# calculate dimensions of NON-scaled cutout
old_wd = x2 - x1 + 1
old_ht = y2 - y1 + 1
max_x, max_y = shp[1] - 1, shp[0] - 1
if (new_wd != old_wd) or (new_ht != old_ht):
# Make indexes and scale them
# Is there a more efficient way to do this?
yi = np.mgrid[0:new_ht].reshape(-1, 1)
xi = np.mgrid[0:new_wd].reshape(1, -1)
iscale_x = float(old_wd) / float(new_wd)
iscale_y = float(old_ht) / float(new_ht)
xi = (x1 + xi * iscale_x).clip(0, max_x).astype('int')
yi = (y1 + yi * iscale_y).clip(0, max_y).astype('int')
wd, ht = xi.shape[1], yi.shape[0]
# bounds check against shape (to protect future data access)
xi_max, yi_max = xi[0, -1], yi[-1, 0]
assert xi_max <= max_x, ValueError("X index (%d) exceeds shape bounds (%d)" % (xi_max, max_x))
assert yi_max <= max_y, ValueError("Y index (%d) exceeds shape bounds (%d)" % (yi_max, max_y))
view = np.s_[yi, xi]
else:
# simple stepped view will do, because new view is same as old
wd, ht = old_wd, old_ht
view = np.s_[y1:y2 + 1, x1:x2 + 1]
# Calculate actual scale used (vs. desired)
old_wd, old_ht = max(old_wd, 1), max(old_ht, 1)
scale_x = float(wd) / old_wd
scale_y = float(ht) / old_ht
# return view + actual scale factors used
return (view, (scale_x, scale_y))
def get_scaled_cutout_wdhtdp_view(shp, p1, p2, new_dims):
"""
Like get_scaled_cutout_wdht, but returns the view/slice to extract
from an image instead of the extraction itself.
"""
x1, y1, z1 = p1
x2, y2, z2 = p2
new_wd, new_ht, new_dp = new_dims
x1, y1, x2, y2 = int(x1), int(y1), int(x2), int(y2), int(z1), int(z2)
z1, z2, new_wd, new_ht = int(z1), int(z2), int(new_wd), int(new_ht)
# calculate dimensions of NON-scaled cutout
old_wd = x2 - x1 + 1
old_ht = y2 - y1 + 1
old_dp = z2 - z1 + 1
max_x, max_y, max_z = shp[1] - 1, shp[0] - 1, shp[2] - 1
if (new_wd != old_wd) or (new_ht != old_ht) or (new_dp != old_dp):
# Make indexes and scale them
# Is there a more efficient way to do this?
yi = np.mgrid[0:new_ht].reshape(-1, 1, 1)
xi = np.mgrid[0:new_wd].reshape(1, -1, 1)
zi = np.mgrid[0:new_dp].reshape(1, 1, -1)
iscale_x = float(old_wd) / float(new_wd)
iscale_y = float(old_ht) / float(new_ht)
iscale_z = float(old_dp) / float(new_dp)
xi = (x1 + xi * iscale_x).clip(0, max_x).astype('int')
yi = (y1 + yi * iscale_y).clip(0, max_y).astype('int')
zi = (z1 + zi * iscale_z).clip(0, max_z).astype('int')
wd, ht, dp = xi.shape[1], yi.shape[0], zi.shape[2]
# bounds check against shape (to protect future data access)
xi_max, yi_max, zi_max = xi[0, -1, 0], yi[-1, 0, 0], zi[0, 0, -1]
assert xi_max <= max_x, ValueError("X index (%d) exceeds shape bounds (%d)" % (xi_max, max_x))
assert yi_max <= max_y, ValueError("Y index (%d) exceeds shape bounds (%d)" % (yi_max, max_y))
assert zi_max <= max_z, ValueError("Z index (%d) exceeds shape bounds (%d)" % (zi_max, max_z))
view = np.s_[yi, xi, zi]
else:
# simple stepped view will do, because new view is same as old
wd, ht, dp = old_wd, old_ht, old_dp
view = np.s_[y1:y2 + 1, x1:x2 + 1, z1:z2 + 1]
# Calculate actual scale used (vs. desired)
old_wd, old_ht, old_dp = max(old_wd, 1), max(old_ht, 1), max(old_dp, 1)
scale_x = float(wd) / old_wd
scale_y = float(ht) / old_ht
scale_z = float(dp) / old_dp
# return view + actual scale factors used
return (view, (scale_x, scale_y, scale_z))
def get_scaled_cutout_wdht(data_np, x1, y1, x2, y2, new_wd, new_ht,
interpolation='basic', logger=None):
x1, y1, x2, y2 = int(x1), int(y1), int(x2), int(y2)
new_wd, new_ht = int(new_wd), int(new_ht)
rdim = data_np.shape[2:]
open_cl_ok = (len(rdim) == 0 or (len(rdim) == 1 and rdim[0] == 4))
if have_opencv:
if logger is not None:
logger.debug("resizing with OpenCv")
# opencv is fastest and supports many methods
if interpolation == 'basic':
interpolation = 'nearest'
method = cv2_resize[interpolation]
newdata = cv2.resize(data_np[y1:y2 + 1, x1:x2 + 1], (new_wd, new_ht),
interpolation=method)
old_wd, old_ht = max(x2 - x1 + 1, 1), max(y2 - y1 + 1, 1)
ht, wd = newdata.shape[:2]
scale_x, scale_y = float(wd) / old_wd, float(ht) / old_ht
elif (have_opencl and interpolation in ('basic', 'nearest') and
open_cl_ok):
# opencl is almost as fast or sometimes faster, but currently
# we only support nearest neighbor
if logger is not None:
logger.debug("resizing with OpenCL")
old_wd, old_ht = max(x2 - x1 + 1, 1), max(y2 - y1 + 1, 1)
scale_x, scale_y = float(new_wd) / old_wd, float(new_ht) / old_ht
newdata, (scale_x, scale_y) = trcalc_cl.get_scaled_cutout_basic(data_np,
x1, y1, x2, y2,
scale_x, scale_y)
elif interpolation not in ('basic', 'nearest'):
raise ValueError("Interpolation method not supported: '%s'" % (
interpolation))
else:
if logger is not None:
logger.debug('resizing by slicing')
view, (scale_x, scale_y) = get_scaled_cutout_wdht_view(data_np.shape,
x1, y1, x2, y2,
new_wd, new_ht)
newdata = data_np[view]
return newdata, (scale_x, scale_y)
def get_scaled_cutout_wdhtdp(data_np, p1, p2, new_dims, logger=None):
if logger is not None:
logger.debug('resizing by slicing')
view, scales = get_scaled_cutout_wdhtdp_view(data_np.shape,
p1, p2, new_dims)
newdata = data_np[view]
return newdata, scales
def get_scaled_cutout_basic_view(shp, p1, p2, scales):
"""
Like get_scaled_cutout_basic, but returns the view/slice to extract
from an image, instead of the extraction itself
"""
x1, y1 = p1[:2]
x2, y2 = p2[:2]
scale_x, scale_y = scales[:2]
# calculate dimensions of NON-scaled cutout
old_wd = x2 - x1 + 1
old_ht = y2 - y1 + 1
# calculate dimensions of scaled cutout
new_wd = int(round(scale_x * old_wd))
new_ht = int(round(scale_y * old_ht))
if len(scales) == 2:
return get_scaled_cutout_wdht_view(shp, x1, y1, x2, y2, new_wd, new_ht)
z1, z2, scale_z = p1[2], p2[2], scales[2]
old_dp = z2 - z1 + 1
new_dp = int(round(scale_z * old_dp))
return get_scaled_cutout_wdhtdp_view(shp, p1, p2, (new_wd, new_ht, new_dp))
def get_scaled_cutout_basic(data_np, x1, y1, x2, y2, scale_x, scale_y,
interpolation='basic', logger=None):
x1, y1, x2, y2 = int(x1), int(y1), int(x2), int(y2)
rdim = data_np.shape[2:]
open_cl_ok = (len(rdim) == 0 or (len(rdim) == 1 and rdim[0] == 4))
if have_opencv:
if logger is not None:
logger.debug("resizing with OpenCv")
# opencv is fastest
if interpolation == 'basic':
interpolation = 'nearest'
method = cv2_resize[interpolation]
x1, y1, x2, y2 = int(x1), int(y1), int(x2), int(y2)
newdata = cv2.resize(data_np[y1:y2 + 1, x1:x2 + 1], None,
fx=scale_x, fy=scale_y,
interpolation=method)
old_wd, old_ht = max(x2 - x1 + 1, 1), max(y2 - y1 + 1, 1)
ht, wd = newdata.shape[:2]
scale_x, scale_y = float(wd) / old_wd, float(ht) / old_ht
elif (have_opencl and interpolation in ('basic', 'nearest') and
open_cl_ok):
if logger is not None:
logger.debug("resizing with OpenCL")
newdata, (scale_x, scale_y) = trcalc_cl.get_scaled_cutout_basic(
data_np, x1, y1, x2, y2, scale_x, scale_y)
elif interpolation not in ('basic', 'nearest'):
raise ValueError("Interpolation method not supported: '%s'" % (
interpolation))
else:
if logger is not None:
logger.debug('resizing by slicing')
view, scales = get_scaled_cutout_basic_view(data_np.shape,
(x1, y1), (x2, y2),
(scale_x, scale_y))
scale_x, scale_y = scales
newdata = data_np[view]
return newdata, (scale_x, scale_y)
def get_scaled_cutout_basic2(data_np, p1, p2, scales,
interpolation='basic', logger=None):
if interpolation not in ('basic', 'nearest'):
raise ValueError("Interpolation method not supported: '%s'" % (
interpolation))
if logger is not None:
logger.debug('resizing by slicing')
view, scales = get_scaled_cutout_basic_view(data_np.shape,
p1, p2, scales)
newdata = data_np[view]
return newdata, scales
def transform(data_np, flip_x=False, flip_y=False, swap_xy=False):
# Do transforms as necessary
if flip_y:
data_np = np.flipud(data_np)
if flip_x:
data_np = np.fliplr(data_np)
if swap_xy:
data_np = data_np.swapaxes(0, 1)
return data_np
def calc_image_merge_clip(p1, p2, dst, q1, q2):
"""
p1 (x1, y1, z1) and p2 (x2, y2, z2) define the extent of the (non-scaled)
data shown. The image, defined by region q1, q2 is to be placed at dst
in the image (destination may be outside of the actual data array).
Refines the modified points (q1', q2') defining the clipped rectangle
needed to be cut from the source array and scaled.
"""
x1, y1 = p1[:2]
x2, y2 = p2[:2]
dst_x, dst_y = dst[:2]
a1, b1 = q1[:2]
a2, b2 = q2[:2]
src_wd, src_ht = a2 - a1, b2 - b1
# Trim off parts of srcarr that would be "hidden"
# to the left and above the dstarr edge.
ex = y1 - dst_y
if ex > 0:
src_ht -= ex
dst_y += ex
b1 += ex
ex = x1 - dst_x
if ex > 0:
src_wd -= ex
dst_x += ex
a1 += ex
# Trim off parts of srcarr that would be "hidden"
# to the right and below dstarr edge.
ex = dst_y + src_ht - y2
if ex > 0:
src_ht -= ex
b2 -= ex
ex = dst_x + src_wd - x2
if ex > 0:
src_wd -= ex
a2 -= ex
if len(p1) > 2:
# 3D image
z1, z2, dst_z, c1, c2 = p1[2], p2[2], dst[2], q1[2], q2[2]
src_dp = c2 - c1
ex = z1 - dst_z
if ex > 0:
src_dp -= ex
dst_z += ex
c1 += ex
ex = dst_z + src_dp - z2
if ex > 0:
src_dp -= ex
c2 -= ex
return ((dst_x, dst_y, dst_z), (a1, b1, c1), (a2, b2, c2))
else:
return ((dst_x, dst_y), (a1, b1), (a2, b2))
def overlay_image_2d(dstarr, pos, srcarr, dst_order='RGBA',
src_order='RGBA',
alpha=1.0, copy=False, fill=True, flipy=False):
dst_ht, dst_wd, dst_ch = dstarr.shape
src_ht, src_wd, src_ch = srcarr.shape
dst_x, dst_y = int(round(pos[0])), int(round(pos[1]))
if flipy:
srcarr = np.flipud(srcarr)
# Trim off parts of srcarr that would be "hidden"
# to the left and above the dstarr edge.
if dst_y < 0:
dy = abs(dst_y)
srcarr = srcarr[dy:, :, :]
src_ht -= dy
dst_y = 0
if dst_x < 0:
dx = abs(dst_x)
srcarr = srcarr[:, dx:, :]
src_wd -= dx
dst_x = 0
if src_wd <= 0 or src_ht <= 0:
return dstarr
# Trim off parts of srcarr that would be "hidden"
# to the right and below the dstarr edge.
ex = dst_y + src_ht - dst_ht
if ex > 0:
srcarr = srcarr[:dst_ht, :, :]
src_ht -= ex
ex = dst_x + src_wd - dst_wd
if ex > 0:
srcarr = srcarr[:, :dst_wd, :]
src_wd -= ex
if copy:
dstarr = np.copy(dstarr, order='C')
da_idx = -1
slc = slice(0, 3)
if 'A' in dst_order:
da_idx = dst_order.index('A')
# Currently we assume that alpha channel is in position 0 or 3 in dstarr
if da_idx == 0:
slc = slice(1, 4)
elif da_idx != 3:
raise ValueError("Alpha channel not in expected position (0 or 4) in dstarr")
# fill alpha channel in destination in the area we will be dropping
# the image
if fill and (da_idx >= 0):
dstarr[dst_y:dst_y + src_ht, dst_x:dst_x + src_wd, da_idx] = 255
if (src_ch > 3) and ('A' in src_order):
sa_idx = src_order.index('A')
# if overlay source contains an alpha channel, extract it
# and use it, otherwise use scalar keyword parameter
alpha = srcarr[0:src_ht, 0:src_wd, sa_idx] / 255.0
alpha = np.dstack((alpha, alpha, alpha))
# reorder srcarr if necessary to match dstarr for alpha merge
get_order = dst_order
if ('A' in dst_order) and not ('A' in src_order):
get_order = dst_order.replace('A', '')
if get_order != src_order:
srcarr = reorder_image(get_order, srcarr, src_order)
# calculate alpha blending
# Co = CaAa + CbAb(1 - Aa)
a_arr = (alpha * srcarr[0:src_ht, 0:src_wd, slc]).astype(np.uint8)
b_arr = ((1.0 - alpha) * dstarr[dst_y:dst_y + src_ht,
dst_x:dst_x + src_wd,
slc]).astype(np.uint8)
# Place our srcarr into this dstarr at dst offsets
#dstarr[dst_y:dst_y+src_ht, dst_x:dst_x+src_wd, slc] += addarr[0:src_ht, 0:src_wd, slc]
dstarr[dst_y:dst_y + src_ht, dst_x:dst_x + src_wd, slc] = \
a_arr[0:src_ht, 0:src_wd, slc] + b_arr[0:src_ht, 0:src_wd, slc]
return dstarr
def overlay_image_3d(dstarr, pos, srcarr, dst_order='RGBA', src_order='RGBA',
alpha=1.0, copy=False, fill=True, flipy=False):
dst_x, dst_y, dst_z = pos
dst_ht, dst_wd, dst_dp, dst_ch = dstarr.shape
src_ht, src_wd, src_dp, src_ch = srcarr.shape
if flipy:
srcarr = np.flipud(srcarr)
# Trim off parts of srcarr that would be "hidden"
# to the left and above the dstarr edge.
if dst_y < 0:
dy = abs(dst_y)
srcarr = srcarr[dy:, :, :]
src_ht -= dy
dst_y = 0
if dst_x < 0:
dx = abs(dst_x)
srcarr = srcarr[:, dx:, :]
src_wd -= dx
dst_x = 0
if dst_z < 0:
dz = abs(dst_z)
srcarr = srcarr[:, :, dz:]
src_dp -= dz
dst_z = 0
if src_wd <= 0 or src_ht <= 0 or src_dp <= 0:
return dstarr
# Trim off parts of srcarr that would be "hidden"
# to the right and below the dstarr edge.
ex = dst_y + src_ht - dst_ht
if ex > 0:
srcarr = srcarr[:dst_ht, :, :]
src_ht -= ex
ex = dst_x + src_wd - dst_wd
if ex > 0:
srcarr = srcarr[:, :dst_wd, :]
src_wd -= ex
ex = dst_z + src_dp - dst_dp
if ex > 0:
srcarr = srcarr[:, :, :dst_dp]
src_dp -= ex
if src_wd <= 0 or src_ht <= 0 or src_dp <= 0:
return dstarr
if copy:
dstarr = np.copy(dstarr, order='C')
da_idx = -1
slc = slice(0, 3)
if 'A' in dst_order:
da_idx = dst_order.index('A')
# Currently we assume that alpha channel is in position 0 or 3 in dstarr
if da_idx == 0:
slc = slice(1, 4)
elif da_idx != 3:
raise ValueError("Alpha channel not in expected position (0 or 4) in dstarr")
# fill alpha channel in destination in the area we will be dropping
# the image
if fill and (da_idx >= 0):
dstarr[dst_y:dst_y + src_ht, dst_x:dst_x + src_wd,
dst_z:dst_z + src_dp, da_idx] = 255
if (src_ch > 3) and ('A' in src_order):
sa_idx = src_order.index('A')
# if overlay source contains an alpha channel, extract it
# and use it, otherwise use scalar keyword parameter
alpha = srcarr[0:src_ht, 0:src_wd, 0:src_dp, sa_idx] / 255.0
#alpha = np.dstack((alpha, alpha, alpha))
alpha = np.concatenate([alpha[..., np.newaxis],
alpha[..., np.newaxis],
alpha[..., np.newaxis]],
axis=-1)
# reorder srcarr if necessary to match dstarr for alpha merge
get_order = dst_order
if ('A' in dst_order) and not ('A' in src_order):
get_order = dst_order.replace('A', '')
if get_order != src_order:
srcarr = reorder_image(get_order, srcarr, src_order)
# calculate alpha blending
# Co = CaAa + CbAb(1 - Aa)
a_arr = (alpha * srcarr[0:src_ht, 0:src_wd,
0:src_dp, slc]).astype(np.uint8)
b_arr = ((1.0 - alpha) * dstarr[dst_y:dst_y + src_ht,
dst_x:dst_x + src_wd,
dst_z:dst_z + src_dp,
slc]).astype(np.uint8)
# Place our srcarr into this dstarr at dst offsets
dstarr[dst_y:dst_y + src_ht, dst_x:dst_x + src_wd,
dst_z:dst_z + src_dp, slc] = \
a_arr[0:src_ht, 0:src_wd, 0:src_dp, slc] + \
b_arr[0:src_ht, 0:src_wd, 0:src_dp, slc]
return dstarr
def overlay_image(dstarr, pos, srcarr, **kwargs):
method = overlay_image_2d
if len(srcarr.shape) > 3:
method = overlay_image_3d
return method(dstarr, pos, srcarr, **kwargs)
def reorder_image(dst_order, src_arr, src_order):
indexes = [src_order.index(c) for c in dst_order]
#return np.dstack([ src_arr[..., idx] for idx in indexes ])
return np.concatenate([src_arr[..., idx, np.newaxis]
for idx in indexes], axis=-1)
def strip_z(pts):
"""Strips a Z component from `pts` if it is present."""
pts = np.asarray(pts)
if pts.shape[-1] > 2:
pts = np.asarray((pts.T[0], pts.T[1])).T
return pts
def pad_z(pts, value=0.0):
"""Adds a Z component from `pts` if it is missing.
The value defaults to `value` (0.0)"""
pts = np.asarray(pts)
if pts.shape[-1] < 3:
if len(pts.shape) < 2:
return np.asarray((pts[0], pts[1], value), dtype=pts.dtype)
pad_col = np.full(len(pts), value, dtype=pts.dtype)
pts = np.asarray((pts.T[0], pts.T[1], pad_col)).T
return pts
def get_bounds(pts):
"""Return the minimum point and maximum point bounding a
set of points."""
pts_t = np.asarray(pts).T
return np.asarray(([np.min(_pts) for _pts in pts_t],
[np.max(_pts) for _pts in pts_t]))
# END
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