About

This package is 59.1 KB. It is available at http://archive.ubuntu.com/ubuntu/pool/universe/s/srst2/srst2_0.2.0-5_amd64.deb .

View its full control file here: debian/control.

Description

Short Read Sequence Typing for Bacterial Pathogens

Relations

This package recommends: python-rpy2.

This package does not suggest any other package.

This package does not conflict with any other package.

Package Contents

This package is indexed.

srst2 0.2.0-5 is in ubuntu - bionic / universe. This package's architecture is: amd64.

File Mime Type Owner Mode Size
postinst text/x-shellscript N/A N/A 171 bytes
prerm text/x-shellscript N/A N/A 247 bytes
/usr/ root:root 0o755
/usr/bin/ root:root 0o755
/usr/bin/csv_to_gene_db root:root 0o777
/usr/bin/get_all_vfdb root:root 0o777
/usr/bin/get_genus_vfdb root:root 0o777
/usr/bin/getmlst root:root 0o777
/usr/bin/slurm_srst2 root:root 0o777
/usr/bin/srst2 root:root 0o777
/usr/bin/VFDB_cdhit_to_csv root:root 0o777
/usr/bin/VFDBgenus root:root 0o777
/usr/share/ root:root 0o755
/usr/share/doc/ root:root 0o755
/usr/share/doc-base/ root:root 0o755
/usr/share/doc-base/srst2 text/plain root:root 0o644 530 bytes
/usr/share/doc/srst2/ root:root 0o755
/usr/share/doc/srst2/changelog.Debian.gz application/gzip root:root 0o644 527 bytes
/usr/share/doc/srst2/copyright text/plain root:root 0o644 2.0 KB
/usr/share/doc/srst2/example.txt.gz application/gzip root:root 0o644 2.3 KB
/usr/share/doc/srst2/README_database_clustering.html text/plain root:root 0o644 6.7 KB
/usr/share/doc/srst2/README.html text/html root:root 0o644 69.7 KB
/usr/share/doc/srst2/tests/ root:root 0o755
/usr/share/doc/srst2/tests/test_slurm_srst2.py.gz application/gzip root:root 0o644 789 bytes
/usr/share/doc/srst2/tests/test_srst2.py.gz application/gzip root:root 0o644 1.5 KB
/usr/share/man/ root:root 0o755
/usr/share/man/man1/ root:root 0o755
/usr/share/man/man1/csv_to_gene_db.1.gz application/gzip root:root 0o644 784 bytes
/usr/share/man/man1/get_all_vfdb.1.gz application/gzip root:root 0o644 413 bytes
/usr/share/man/man1/get_genus_vfdb.1.gz application/gzip root:root 0o644 435 bytes
/usr/share/man/man1/getmlst.1.gz application/gzip root:root 0o644 826 bytes
/usr/share/man/man1/slurm_srst2.1.gz application/gzip root:root 0o644 795 bytes
/usr/share/man/man1/srst2.1.gz application/gzip root:root 0o644 2.2 KB
/usr/share/man/man1/VFDB_cdhit_to_csv.1.gz application/gzip root:root 0o644 560 bytes
/usr/share/man/man1/VFDBgenus.1.gz application/gzip root:root 0o644 555 bytes
/usr/share/python/ root:root 0o755
/usr/share/python/runtime.d/ root:root 0o755
/usr/share/python/runtime.d/srst2.rtupdate text/x-shellscript root:root 0o755 123 bytes
/usr/share/srst2/ root:root 0o755
/usr/share/srst2/analyseSRST2.py text/x-python root:root 0o755 11.2 KB
/usr/share/srst2/consensus_alignment.py text/x-python root:root 0o644 2.0 KB
/usr/share/srst2/database_clustering/ root:root 0o755
/usr/share/srst2/database_clustering/align_plot_tree_min3.py text/x-python root:root 0o644 1.6 KB
/usr/share/srst2/database_clustering/cdhit_to_csv.py text/x-python root:root 0o644 4.1 KB
/usr/share/srst2/database_clustering/csv_to_gene_db.py text/x-python root:root 0o755 3.7 KB
/usr/share/srst2/database_clustering/get_all_vfdb.sh text/x-shellscript root:root 0o755 1.9 KB
/usr/share/srst2/database_clustering/get_genus_vfdb.sh text/x-shellscript root:root 0o755 1.6 KB
/usr/share/srst2/database_clustering/VFDB_cdhit_to_csv.py text/x-python root:root 0o755 2.0 KB
/usr/share/srst2/database_clustering/VFDBgenus.py text/x-python root:root 0o755 1.4 KB
/usr/share/srst2/getmlst.py text/x-python root:root 0o755 7.0 KB
/usr/share/srst2/__init__.py text/plain root:root 0o644 2 bytes
/usr/share/srst2/qsub_srst2.py text/x-python root:root 0o755 10.8 KB
/usr/share/srst2/slurm_srst2.py text/x-python root:root 0o755 10.8 KB
/usr/share/srst2/srst2.py text/x-python root:root 0o755 70.2 KB
/usr/share/srst2/version.py text/plain root:root 0o644 330 bytes