/usr/share/doc/ssake/examples/coliMiSeq300m80.scaffolds.200stats is in ssake-examples 4.0-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 | ================================================================================
Reporting on sequences >= 200 nt
================================================================================
SEQUENCE STATS
--------------------------------------------------------------------------------
Mean (nt),52613.75
Max (nt),552112
Min (nt),303
n,89
Stdev (nt),98028.57
Variance (nt),9609599695.35
TrimmedMean (nt),11342.36
Median (nt),2436.00
Sum (nt),4682624.00
N20,325211
N50,206493
N80,106146
Size Range,#bases,#sequences
>=100000,3770357,17
200-1000,20587,26
10000-100000,810593,16
1000-10000,81075,30
--------------------------------------------------------------------------------
G+C content STATS
--------------------------------------------------------------------------------
Mean (GC%),48.17
Max (GC%),58
Min (GC%),32
n,89
Stdev (GC%),5.50
Variance (GC%),30.24
TrimmedMean (GC%),49.68
Median (GC%),49.99
Sum (GC%),4287.12
--------------------------------------------------------------------------------
|