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/usr/bin/caribou-preferences is in caribou 0.4.21-5.

This file is owned by root:root, with mode 0o755.

The actual contents of the file can be viewed below.

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#!/bin/sh
#
# Antler - a Caribou keyboard implementation
#
# Copyright (C) 2011 Eitan Isaacson <eitan@monotonous.org>
#
# This program is free software; you can redistribute it and/or modify it
# under the terms of the GNU Lesser General Public License as published by the
# Free Software Foundation; either version 2.1 of the License, or (at your
# option) any later version.
#
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public License
# for more details.
#
# You should have received a copy of the GNU Lesser General Public License
# along with this program; if not, write to the Free Software Foundation,
# Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301  USA

script_dir="$(dirname "$(readlink -f ${0})")"

prefix=/usr
exec_prefix=${prefix}
datarootdir=${prefix}/share

if [ $script_dir = "${exec_prefix}/bin" ]
then
  datadir="$(/usr/bin/python3 -c "from gi.repository import GLib; print(':'.join(GLib.get_system_data_dirs()))")"
  export PYTHONPATH="/usr/lib/python3.6/site-packages${PYTHONPATH:+:$PYTHONPATH}"
  export GI_TYPELIB_PATH="${prefix}/lib/x86_64-linux-gnu/girepository-1.0${GI_TYPELIB_PATH:+:$GI_TYPELIB_PATH}"
  export LD_LIBRARY_PATH="${prefix}/lib/x86_64-linux-gnu${LD_LIBRARY_PATH:+:$LD_LIBRARY_PATH}"
  export XDG_DATA_DIRS="${datarootdir}${datadir:+:$datadir}"
else
  export PYTHONPATH="$(dirname $script_dir)${PYTHONPATH:+:$PYTHONPATH}"
  export GI_TYPELIB_PATH="$(dirname $script_dir)/libcaribou${GI_TYPELIB_PATH:+:$GI_TYPELIB_PATH}"
  export LD_LIBRARY_PATH="$(dirname $script_dir)/libcaribou/.lib${LD_LIBRARY_PATH:+:$LD_LIBRARY_PATH}"
fi

/usr/bin/python3 -c "
import signal
signal.signal(signal.SIGINT, signal.SIG_DFL)

from caribou.settings.preferences_window import PreferencesWindow
from caribou.settings import CaribouSettings
from gi.repository import Gtk

w = PreferencesWindow(CaribouSettings())

w.connect('delete-event', lambda x, y: Gtk.main_quit())

w.show_all()

try:
    Gtk.main()
except KeyboardInterrupt:
    Gtk.main_quit()
"