/usr/share/doc/flexbar/examples/result_left_tail.log is in flexbar 1:3.0.3-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 | ________ __
/ ____/ /__ _ __/ /_ ____ ______
/ /_ / / _ \| |/ / __ \/ __ `/ ___/
/ __/ / / __/> </ /_/ / /_/ / /
/_/ /_/\___/_/|_/_.___/\__._/_/
Flexbar - flexible barcode and adapter removal, version 3.0.3
Developed with SeqAn, the library for sequence analysis
Available on github.com/seqan/flexbar
Local time: Thu Nov 2 10:17:32 2017
Number of threads: 1
Bundled fragments: 256
Target name: result_left_tail
File type: fastq
Reads file: reads.fastq
Adapter file: adapters.fasta
max-uncalled: 0
min-read-length: 10
adapter-trim-end: LTAIL
adapter-min-overlap: 4
adapter-error-rate: 0.1
adapter-match: 1
adapter-mismatch: -1
adapter-gap: -6
Adapter: Sequence:
ad1 CGTCTT
Processing reads ...done.
Elapsed time: < 1 sec
Adapter removal statistics
==========================
Adapter: Overlap removal: Full length:
ad1 3 1
Min, max, mean and median overlap: 4 / 6 / 5 / 4
Output file statistics
======================
Read file: result_left_tail.fastq
written reads 12
short reads 1
Filtering statistics
====================
Processed reads 13
skipped due to uncalled bases 0
short prior to adapter removal 0
finally skipped short reads 1
Discarded reads overall 1
Remaining reads 12 (92%)
Processed bases 422
Remaining bases 398 (94% of input)
Flexbar completed adapter removal.
|