/usr/share/doc/infernal/examples/testsuite/bug-i14.sto is in infernal 1.1.2-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 | # STOCKHOLM 1.0
#=GF SCORE 0.000000
#=GF ID 12036
hg18 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCGTTTATTT
panTro2 AAATATACAGTATAAATACGGCAATTTATCACAAGCTGTCATGGATGACTTCATTTATTT
rheMac2 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATTTATTT
tarSyr1 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATTTATTT
otoGar1 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATTTATTT
tupBel1 AAATATACAGTATAAATACGGCAATTCATCACCAGCTGTCATGGATGACTTCATTTATTT
mm9 AAATATACAGTATAAATACGGCAATTCATCACGAGCTGTCATGGATGACTTCATTTATTT
dipOrd1 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATTTATTT
cavPor3 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATTTATTT
speTri1 AAATATACAGTATAAATACGGCAATTCATCACGAGCTGTCATGGATGACTTCATTTATTT
oryCun1 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATTTATTT
ochPri2 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATTTATTT
rn4 AAATATACAGTATAAATACGGCAATTCATCACGAGCTGTCATGGATGACTTCATTTATTT
vicPac1 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATTTATTT
turTru1 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATTTATTT
bosTau4 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATTTATTT
equCab2 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATTTATTT
felCat3 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATTTATTT
canFam2 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATTTATTT
myoLuc1 AAATATACAGTATAAATACGGCAATTCATCACAACCTGTCATGGATGACTTCATTTATTT
pteVam1 AAATATACAGTATAAATACGGCAATTCATCACAACCTGTCATGGATGACTTCATTTATTT
loxAfr2 AAATATACAGTGTAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATTTATTT
echTel1 AAATATACAGTATAAATACGGCAATTCATCACGAGCTGTCATGAGTGACCTCATCTATTT
choHof1 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATTTATTT
monDom4 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATTTATTT
galGal3 AAATATACAGTATAAATACGGCAATTCATCACAAGCTGTCATGGATGACTTCATCTATTT
#=GC SS_cons (((((.((((.........................)))).(((((....))))).)))))
//
|