/usr/include/pbseq/alignment/simulator/OutputSampleList.hpp is in libblasr-dev 0~20161219-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 | #ifndef _SIMULATOR_OUTPUT_SAMPLE_LIST_HPP_
#define _SIMULATOR_OUTPUT_SAMPLE_LIST_HPP_
#include <vector>
#include "OutputSample.hpp"
class OutputSampleList: public std::vector<OutputSample> {
public:
void Write(ofstream &out) {
int nElem = this->size();
out.write((char*)&nElem, sizeof(int));
if (nElem > 0) {
int i;
for (i = 0; i < nElem; i++) {
(*this)[i].Write(out);
}
}
}
void Read(std::ifstream &in) {
int nElem;
in.read((char*) &nElem, sizeof(int));
if (nElem > 0) {
this->resize(nElem);
int i;
for (i = 0; i < nElem; i++) {
(*this)[i].Read(in);
}
}
}
};
#endif
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