/usr/ is in libbpp-phyl-omics-dev 2.4.0-2.
This file is owned by root:root, with mode 0o755.
..
/usr/include/
/usr/include/Bpp/
/usr/include/Bpp/Seq/
/usr/include/Bpp/Seq/Io/
/usr/include/Bpp/Seq/Io/Maf/
/usr/include/Bpp/Seq/Io/Maf/AbstractDistanceEstimationMafIterator.h
/usr/include/Bpp/Seq/Io/Maf/AbstractPhylogenyReconstructionMafIterator.h
/usr/include/Bpp/Seq/Io/Maf/CountClustersMafStatistics.h
/usr/include/Bpp/Seq/Io/Maf/CountDistanceEstimationMafIterator.h
/usr/include/Bpp/Seq/Io/Maf/DistanceBasedPhylogenyReconstructionMafIterator.h
/usr/include/Bpp/Seq/Io/Maf/FilterTreeMafIterator.h
/usr/include/Bpp/Seq/Io/Maf/MaximumLikelihoodDistanceEstimationMafIterator.h
/usr/include/Bpp/Seq/Io/Maf/MaximumLikelihoodModelFitMafStatistics.h
/usr/include/Bpp/Seq/Io/Maf/OutputDistanceMatrixMafIterator.h
/usr/include/Bpp/Seq/Io/Maf/OutputTreeMafIterator.h
/usr/include/Bpp/Seq/Io/Maf/TreeManipulationMafIterators.h
/usr/lib/
/usr/lib/x86_64-linux-gnu/
/usr/lib/x86_64-linux-gnu/cmake/
/usr/lib/x86_64-linux-gnu/cmake/bpp-phyl-omics/
/usr/lib/x86_64-linux-gnu/cmake/bpp-phyl-omics/bpp-phyl-omics-config-version.cmake
/usr/lib/x86_64-linux-gnu/cmake/bpp-phyl-omics/bpp-phyl-omics-config.cmake
/usr/lib/x86_64-linux-gnu/cmake/bpp-phyl-omics/bpp-phyl-omics-targets-none.cmake
/usr/lib/x86_64-linux-gnu/cmake/bpp-phyl-omics/bpp-phyl-omics-targets.cmake
/usr/lib/x86_64-linux-gnu/libbpp-phyl-omics.a
/usr/share/
/usr/share/doc/
/usr/share/doc/libbpp-phyl-omics-dev/
/usr/share/doc/libbpp-phyl-omics-dev/copyright
/usr/lib/x86_64-linux-gnu/libbpp-phyl-omics.so
/usr/share/doc/libbpp-phyl-omics-dev/changelog.Debian.gz