/usr/include/fml/htab.h is in libfml-dev 0.1-4.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 | #ifndef BFC_HTAB_H
#define BFC_HTAB_H
#include <stdint.h>
#include "kmer.h"
#define BFC_CH_KEYBITS 50
#define BFC_CH_MAXPRE 20
struct bfc_ch_s;
typedef struct bfc_ch_s bfc_ch_t;
bfc_ch_t *bfc_ch_init(int k, int l_pre);
void bfc_ch_destroy(bfc_ch_t *ch);
int bfc_ch_insert(bfc_ch_t *ch, const uint64_t x[2], int is_high, int forced);
int bfc_ch_get(const bfc_ch_t *ch, const uint64_t x[2]);
uint64_t bfc_ch_count(const bfc_ch_t *ch);
int bfc_ch_hist(const bfc_ch_t *ch, uint64_t cnt[256], uint64_t high[64]);
int bfc_ch_get_k(const bfc_ch_t *ch);
int bfc_ch_kmer_occ(const bfc_ch_t *ch, const bfc_kmer_t *z);
#endif
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