/usr/include/genometools/extended/add_introns_stream_api.h is in libgenometools0-dev 1.5.10+ds-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 | /*
Copyright (c) 2009-2011 Gordon Gremme <gordon@gremme.org>
Permission to use, copy, modify, and distribute this software for any
purpose with or without fee is hereby granted, provided that the above
copyright notice and this permission notice appear in all copies.
THE SOFTWARE IS PROVIDED "AS IS" AND THE AUTHOR DISCLAIMS ALL WARRANTIES
WITH REGARD TO THIS SOFTWARE INCLUDING ALL IMPLIED WARRANTIES OF
MERCHANTABILITY AND FITNESS. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR
ANY SPECIAL, DIRECT, INDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES
WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN
ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT OF
OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS SOFTWARE.
*/
#ifndef ADD_INTRONS_STREAM_API_H
#define ADD_INTRONS_STREAM_API_H
#include <stdio.h>
#include "extended/node_stream_api.h"
/* Implements the <GtNodeStream> interface. A <GtAddIntronsStream> inserts new
feature nodes with type __intron__ between existing feature nodes with type
__exon__. This is a special case of the <GtInterFeatureStream>. */
typedef struct GtAddIntronsStream GtAddIntronsStream;
/* Create a <GtAddIntronsStream*> which inserts feature nodes of type __intron__
between feature nodes of type __exon__ it retrieves from <in_stream> and
returns them. */
GtNodeStream* gt_add_introns_stream_new(GtNodeStream *in_stream);
#endif
|