/usr/include/genometools/extended/array_out_stream_api.h is in libgenometools0-dev 1.5.10+ds-2.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 | /*
Copyright (c) 2011 Sascha Kastens <mail@skastens.de>
Copyright (c) 2011 Center for Bioinformatics, University of Hamburg
Permission to use, copy, modify, and distribute this software for any
purpose with or without fee is hereby granted, provided that the above
copyright notice and this permission notice appear in all copies.
THE SOFTWARE IS PROVIDED "AS IS" AND THE AUTHOR DISCLAIMS ALL WARRANTIES
WITH REGARD TO THIS SOFTWARE INCLUDING ALL IMPLIED WARRANTIES OF
MERCHANTABILITY AND FITNESS. IN NO EVENT SHALL THE AUTHOR BE LIABLE FOR
ANY SPECIAL, DIRECT, INDIRECT, OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES
WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN
ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT OF
OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS SOFTWARE.
*/
#ifndef ARRAY_OUT_STREAM_API_H
#define ARRAY_OUT_STREAM_API_H
#include "core/array_api.h"
#include "core/error_api.h"
#include "extended/node_stream_api.h"
/* The <GtArrayOutStream> class implements the <GtNodeStream> interface.
<GtArrayOutStream> takes nodes from an input stream and adds them to a
<GtArray>. This stream can be used to obtain nodes for processing outside
of the usual stream flow. */
typedef struct GtArrayOutStream GtArrayOutStream;
/* Creates a new <GtArrayInStream>, storing new references to <GtFeatureNode>s
from <in_stream> in <nodes>. Note that the array must be set up to contain
pointers to <GtGenomeNode>s! */
GtNodeStream* gt_array_out_stream_new(GtNodeStream *in_stream,
GtArray *nodes, GtError *err);
/* Like <gt_array_out_stream_new()>, but not restricted to feature nodes. */
GtNodeStream* gt_array_out_stream_all_new(GtNodeStream *in_stream,
GtArray *nodes, GtError *err);
#endif
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