/usr/include/liggghts/dump.h is in libliggghts-dev 3.7.0+repack1-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 | /* ----------------------------------------------------------------------
This is the
██╗ ██╗ ██████╗ ██████╗ ██████╗ ██╗ ██╗████████╗███████╗
██║ ██║██╔════╝ ██╔════╝ ██╔════╝ ██║ ██║╚══██╔══╝██╔════╝
██║ ██║██║ ███╗██║ ███╗██║ ███╗███████║ ██║ ███████╗
██║ ██║██║ ██║██║ ██║██║ ██║██╔══██║ ██║ ╚════██║
███████╗██║╚██████╔╝╚██████╔╝╚██████╔╝██║ ██║ ██║ ███████║
╚══════╝╚═╝ ╚═════╝ ╚═════╝ ╚═════╝ ╚═╝ ╚═╝ ╚═╝ ╚══════╝®
DEM simulation engine, released by
DCS Computing Gmbh, Linz, Austria
http://www.dcs-computing.com, office@dcs-computing.com
LIGGGHTS® is part of CFDEM®project:
http://www.liggghts.com | http://www.cfdem.com
Core developer and main author:
Christoph Kloss, christoph.kloss@dcs-computing.com
LIGGGHTS® is open-source, distributed under the terms of the GNU Public
License, version 2 or later. It is distributed in the hope that it will
be useful, but WITHOUT ANY WARRANTY; without even the implied warranty
of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. You should have
received a copy of the GNU General Public License along with LIGGGHTS®.
If not, see http://www.gnu.org/licenses . See also top-level README
and LICENSE files.
LIGGGHTS® and CFDEM® are registered trade marks of DCS Computing GmbH,
the producer of the LIGGGHTS® software and the CFDEM®coupling software
See http://www.cfdem.com/terms-trademark-policy for details.
-------------------------------------------------------------------------
Contributing author and copyright for this file:
This file is from LAMMPS
LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator
http://lammps.sandia.gov, Sandia National Laboratories
Steve Plimpton, sjplimp@sandia.gov
Copyright (2003) Sandia Corporation. Under the terms of Contract
DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains
certain rights in this software. This software is distributed under
the GNU General Public License.
------------------------------------------------------------------------- */
#ifndef LMP_DUMP_H
#define LMP_DUMP_H
#include <mpi.h>
#include <stdio.h>
#include "pointers.h"
#include "sort_buffer.h"
namespace LAMMPS_NS {
class Dump : protected Pointers {
friend class Info;
public:
char *id; // user-defined name of Dump
char *style; // style of Dump
int igroup,groupbit; // group that Dump is performed on
int first_flag; // 0 if no initial dump, 1 if yes initial dump
int clearstep; // 1 if dump invokes computes, 0 if not
int comm_forward; // size of forward communication (0 if none)
int comm_reverse; // size of reverse communication (0 if none)
// static variable across all Dump objects
static Dump *dumpptr; // holds a ptr to Dump currently being used
Dump(class LAMMPS *, int, char **);
virtual ~Dump();
void init();
virtual void write();
virtual int pack_comm(int, int *, double *, int, int *) {return 0;}
virtual void unpack_comm(int, int, double *) {}
virtual int pack_reverse_comm(int, int, double *) {return 0;}
virtual void unpack_reverse_comm(int, int *, double *) {}
void modify_params(int, char **);
virtual bigint memory_usage();
protected:
int me,nprocs; // proc info
char *filename; // user-specified file
int compressed; // 1 if dump file is written compressed, 0 no
int binary; // 1 if dump file is written binary, 0 no
int multifile; // 0 = one big file, 1 = one file per timestep
int multiproc; // 0 = proc 0 writes for all,
// else # of procs writing files
int nclusterprocs; // # of procs in my cluster that write to one file
int filewriter; // 1 if this proc writes a file, else 0
int fileproc; // ID of proc in my cluster who writes to file
char *multiname; // dump filename with % converted to cluster ID
MPI_Comm clustercomm; // MPI communicator within my cluster of procs
int header_flag; // 0 = item, 2 = xyz
int flush_flag; // 0 if no flush, 1 if flush every dump
int append_flag; // 1 if open file in append mode, 0 if not
int buffer_allow; // 1 if style allows for buffer_flag, 0 if not
int buffer_flag; // 1 if buffer output as one big string, 0 if not
int padflag; // timestep padding in filename
int singlefile_opened; // 1 = one big file, already opened, else 0
char boundstr[9]; // encoding of boundary flags
char *format_default; // default format string
char *format_user; // format string set by user
char *format; // format string for the file write
FILE *fp; // file to write dump to
int size_one; // # of quantities for one atom
int nme; // # of atoms in this dump from me
int nsme; // # of chars in string output from me
double boxxlo,boxxhi; // local copies of domain values
double boxylo,boxyhi; // lo/hi are bounding box for triclinic
double boxzlo,boxzhi;
double boxxy,boxxz,boxyz;
bigint ntotal; // total # of per-atom lines in snapshot
int maxbuf; // size of buf
double *buf; // memory for atom quantities
int maxsbuf; // size of sbuf
char *sbuf; // memory for atom quantities in string format
SortBuffer *sortBuffer; // class used for sorting buffers
virtual void init_style() = 0;
virtual void openfile();
virtual int modify_param(int, char **) {return 0;}
virtual void write_header(bigint) = 0;
virtual int count();
virtual void pack(int *) = 0;
virtual int convert_string(int, double *) {return 0;}
virtual void write_data(int, double *) = 0;
};
}
#endif
/* ERROR/WARNING messages:
E: Cannot dump sort when multiple procs write the dump file
UNDOCUMENTED
E: Cannot dump sort on atom IDs with no atom IDs defined
Self-explanatory.
E: Dump sort column is invalid
Self-explanatory.
E: Too many atoms to dump sort
Cannot sort when running with more than 2^31 atoms.
E: Too much per-proc info for dump
Number of local atoms times number of columns must fit in a 32-bit
integer for dump.
E: Cannot open gzipped file
LAMMPS was compiled without support for reading and writing gzipped
files through a pipeline to the gzip program with -DLAMMPS_GZIP.
E: Cannot open dump file
The specified file cannot be opened. Check that the path and name are
correct. If the file is a compressed file, also check that the gzip
executable can be found and run.
E: Illegal ... command
Self-explanatory. Check the input script syntax and compare to the
documentation for the command. You can use -echo screen as a
command-line option when running LAMMPS to see the offending line.
E: Cannot use dump_modify fileper without % in dump file name
UNDOCUMENTED
E: Cannot use dump_modify nfile without % in dump file name
UNDOCUMENTED
*/
|