This file is indexed.

/usr/lib/x86_64-linux-gnu/perl5/5.26/MongoDB/GridFS.pm is in libmongodb-perl 1.8.1-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
#
#  Copyright 2009-2013 MongoDB, Inc.
#
#  Licensed under the Apache License, Version 2.0 (the "License");
#  you may not use this file except in compliance with the License.
#  You may obtain a copy of the License at
#
#  http://www.apache.org/licenses/LICENSE-2.0
#
#  Unless required by applicable law or agreed to in writing, software
#  distributed under the License is distributed on an "AS IS" BASIS,
#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
#  See the License for the specific language governing permissions and
#  limitations under the License.

use strict;
use warnings;
package MongoDB::GridFS;

# ABSTRACT: A file storage abstraction (DEPRECATED)

use version;
our $VERSION = 'v1.8.1';

use MongoDB::GridFS::File;
use Digest::MD5;
use Moo;
use MongoDB::Error;
use MongoDB::WriteConcern;
use MongoDB::_Types qw(
    BSONCodec
    NonNegNum
    ReadPreference
    WriteConcern
);
use Types::Standard qw(
    InstanceOf
    Str
);
use namespace::clean -except => 'meta';

#pod =attr chunk_size
#pod
#pod The number of bytes per chunk.  Defaults to 261120 (255kb).
#pod
#pod =cut

$MongoDB::GridFS::chunk_size = 261120;

has _database => (
    is       => 'ro',
    isa      => InstanceOf['MongoDB::Database'],
    required => 1,
);

#pod =attr read_preference
#pod
#pod A L<MongoDB::ReadPreference> object.  It may be initialized with a string
#pod corresponding to one of the valid read preference modes or a hash reference
#pod that will be coerced into a new MongoDB::ReadPreference object.
#pod By default it will be inherited from a L<MongoDB::Database> object.
#pod
#pod =cut

has read_preference => (
    is       => 'ro',
    isa      => ReadPreference,
    required => 1,
    coerce   => ReadPreference->coercion,
);

#pod =attr write_concern
#pod
#pod A L<MongoDB::WriteConcern> object.  It may be initialized with a hash
#pod reference that will be coerced into a new MongoDB::WriteConcern object.
#pod By default it will be inherited from a L<MongoDB::Database> object.
#pod
#pod =cut

has write_concern => (
    is       => 'ro',
    isa      => WriteConcern,
    required => 1,
    coerce   => WriteConcern->coercion,
);

#pod =attr max_time_ms
#pod
#pod Specifies the default maximum amount of time in milliseconds that the
#pod server should use for working on a query.
#pod
#pod B<Note>: this will only be used for server versions 2.6 or greater, as that
#pod was when the C<$maxTimeMS> meta-operator was introduced.
#pod
#pod =cut

has max_time_ms => (
    is      => 'ro',
    isa     => NonNegNum,
    required => 1,
);

#pod =attr bson_codec
#pod
#pod An object that provides the C<encode_one> and C<decode_one> methods, such
#pod as from L<MongoDB::BSON>.  It may be initialized with a hash reference that
#pod will be coerced into a new MongoDB::BSON object.  By default it will be
#pod inherited from a L<MongoDB::Database> object.
#pod
#pod =cut

has bson_codec => (
    is       => 'ro',
    isa      => BSONCodec,
    coerce   => BSONCodec->coercion,
    required => 1,
);

#pod =attr prefix
#pod
#pod The prefix used for the collections.  Defaults to "fs".
#pod
#pod =cut

has prefix => (
    is      => 'ro',
    isa     => Str,
    default => 'fs'
);

has files => (
    is => 'lazy',
    isa => InstanceOf['MongoDB::Collection'],
);

sub _build_files {
    my $self = shift;
    my $coll = $self->_database->get_collection(
        $self->prefix . '.files',
        {
            read_preference => $self->read_preference,
            write_concern   => $self->write_concern,
            max_time_ms     => $self->max_time_ms,
            bson_codec      => $self->bson_codec,
        }
    );
    return $coll;
}

has chunks => (
    is => 'lazy',
    isa => InstanceOf['MongoDB::Collection'],
);

sub _build_chunks {
    my $self = shift;
    my $coll = $self->_database->get_collection(
        $self->prefix . '.chunks',
        {
            read_preference => $self->read_preference,
            write_concern   => $self->write_concern,
            max_time_ms     => $self->max_time_ms,
        }
    );
    return $coll;
}

# This checks if the required indexes for GridFS exist in for the current database.
# If they are not found, they will be created.
sub BUILD {
    my ($self) = @_;
    $self->_ensure_indexes();
    return;
}


sub _ensure_indexes {
    my ($self) = @_;

    # ensure the necessary index is present (this may be first usage)
    $self->files->indexes->create_one(Tie::IxHash->new(filename => 1));
    $self->chunks->indexes->create_one(Tie::IxHash->new(files_id => 1, n => 1), {"unique" => 1});
}

#pod =method get
#pod
#pod     $file = $grid->get($id);
#pod
#pod Get a file from GridFS based on its _id.  Returns a L<MongoDB::GridFS::File>.
#pod
#pod To retrieve a file based on metadata like C<filename>, use the L</find_one>
#pod method instead.
#pod
#pod =cut

sub get {
    my ($self, $id) = @_;

    return $self->find_one({_id => $id});
}

#pod =method put
#pod
#pod     $id = $grid->put($fh, $metadata);
#pod     $id = $grid->put($fh, {filename => "pic.jpg"});
#pod
#pod Inserts a file into GridFS, adding a L<MongoDB::OID> as the _id field if the
#pod field is not already defined.  This is a wrapper for C<MongoDB::GridFS::insert>,
#pod see that method below for more information.
#pod
#pod Returns the _id field.
#pod
#pod =cut

sub put {
    my ($self, $fh, $metadata) = @_;

    return $self->insert($fh, $metadata, {safe => 1});
}

#pod =method delete
#pod
#pod     $grid->delete($id)
#pod
#pod Removes the file with the given _id.  Will die if the remove is unsuccessful.
#pod Does not return anything on success.
#pod
#pod =cut

sub delete {
    my ($self, $id) = @_;

    $self->remove({_id => $id}, {safe => 1});
}

#pod =method find_one
#pod
#pod     $file = $grid->find_one({"filename" => "foo.txt"});
#pod     $file = $grid->find_one($criteria, $fields);
#pod
#pod Returns a matching MongoDB::GridFS::File or undef.
#pod
#pod =cut

sub find_one {
    my ($self, $criteria, $fields) = @_;
    $criteria ||= {};

    my $file = $self->files->find_one($criteria, $fields);
    return undef unless $file; ## no critic
    return MongoDB::GridFS::File->new({_grid => $self,info => $file});
}

#pod =method remove
#pod
#pod     $grid->remove({"filename" => "foo.txt"});
#pod     $grid->remove({"filename" => "foo.txt"}, $options);
#pod
#pod Cleanly removes files from the database.  C<$options> is a hash of options for
#pod the remove.
#pod
#pod A hashref of options may be provided with the following keys:
#pod
#pod =for :list
#pod * C<just_one>: If true, only one file matching the criteria will be removed.
#pod * C<safe>: (DEPRECATED) If true, each remove will be checked for success and
#pod   die on failure.  Set the L</write_concern> attribute instead.
#pod
#pod This method doesn't return anything.
#pod
#pod =cut

sub remove {
    my ( $self, $criteria, $options ) = @_;
    $options ||= {};

    my $chunks =
      exists $options->{safe}
      ? $self->chunks->clone( write_concern => $self->_dynamic_write_concern($options) )
      : $self->chunks;

    my $files =
      exists $options->{safe}
      ? $self->files->clone( write_concern => $self->_dynamic_write_concern($options) )
      : $self->files;

    if ( $options->{just_one} ) {
        my $meta = $files->find_one($criteria);
        $chunks->delete_many( { "files_id" => $meta->{'_id'} } );
        $files->delete_one( { "_id" => $meta->{'_id'} } );
    }
    else {
        my $cursor = $files->find($criteria);
        while ( my $meta = $cursor->next ) {
            $chunks->delete_many( { "files_id" => $meta->{'_id'} } );
        }
        $files->delete_many($criteria);
    }
    return;
}


#pod =method insert
#pod
#pod     $id = $gridfs->insert($fh);
#pod     $id = $gridfs->insert($fh, $metadata);
#pod     $id = $gridfs->insert($fh, $metadata, $options);
#pod
#pod     $id = $gridfs->insert($fh, {"content-type" => "text/html"});
#pod
#pod Reads from a file handle into the database.  Saves the file with the given
#pod metadata.  The file handle must be readable.
#pod
#pod A hashref of options may be provided with the following keys:
#pod
#pod =for :list
#pod * C<safe>: (DEPRECATED) Will do safe inserts and check the MD5 hash calculated
#pod   by the database against an MD5 hash calculated by the local filesystem.  If
#pod   the two hashes do not match, then the chunks already inserted will be removed
#pod   and the program will die. Set the L</write_concern> attribute instead.
#pod
#pod Because C<MongoDB::GridFS::insert> takes a file handle, it can be used to insert
#pod very long strings into the database (as well as files).  C<$fh> must be a
#pod FileHandle (not just the native file handle type), so you can insert a string
#pod with:
#pod
#pod     # open the string like a file
#pod     open($basic_fh, '<', \$very_long_string);
#pod
#pod     # turn the file handle into a FileHandle
#pod     $fh = FileHandle->new;
#pod     $fh->fdopen($basic_fh, 'r');
#pod
#pod     $gridfs->insert($fh);
#pod
#pod =cut

sub insert {
    my ($self, $fh, $metadata, $options) = @_;
    $options ||= {};
    require DateTime; # lazy load so we don't have overhead if not needed

    MongoDB::UsageError->throw("not a file handle") unless $fh;
    $metadata = {} unless $metadata && ref $metadata eq 'HASH';

    my $chunks =
      exists $options->{safe}
      ? $self->chunks->clone( write_concern => $self->_dynamic_write_concern($options) )
      : $self->chunks;

    my $files =
      exists $options->{safe}
      ? $self->files->clone( write_concern => $self->_dynamic_write_concern($options) )
      : $self->files;

    my $start_pos = $fh->getpos();

    my $id;
    if (exists $metadata->{"_id"}) {
        $id = $metadata->{"_id"};
    }
    else {
        $id = MongoDB::OID->new;
    }

    my $n = 0;
    my $length = 0;
    while ((my $len = $fh->read(my $data, $MongoDB::GridFS::chunk_size)) != 0) {
        $chunks->insert_one({"files_id" => $id,
                               "n"        => $n,
                               "data"     => \$data});
        $n++;
        $length += $len;
    }

    $fh->setpos($start_pos);

    my %copy = %{$metadata};
    # compare the md5 hashes
    if ($files->write_concern->is_acknowledged) {
        # get an md5 hash for the file. set the retry flag to 'true' incase the 
        # database, collection, or indexes are missing. That way we can recreate them 
        # retry the md5 calc.
        my $result = $self->_database->run_command([filemd5 => $id, root => $self->prefix]);
        $copy{"md5"} = $result->{"md5"};

        my $md5 = Digest::MD5->new;
        $md5->addfile($fh);
        $fh->setpos($start_pos);
        my $digest = $md5->hexdigest;
        if ($digest ne $result->{md5}) {
            # cleanup and die
            $chunks->delete_many({files_id => $id});
            MongoDB::GridFSError->throw(
                "md5 hashes don't match: database got $result->{md5}, fs got $digest" );
        }
    }

    $copy{"_id"} = $id;
    $copy{"chunkSize"} = $MongoDB::GridFS::chunk_size;
    $copy{"uploadDate"} = DateTime->now;
    $copy{"length"} = $length;
    return $files->insert_one(\%copy)->inserted_id;
}

#pod =method drop
#pod
#pod     $grid->drop;
#pod
#pod Removes all files' metadata and contents.
#pod
#pod =cut

sub drop {
    my ($self) = @_;

    $self->files->drop;
    $self->chunks->drop;
    $self->_ensure_indexes;
}

#pod =head2 all
#pod
#pod     @files = $grid->all;
#pod
#pod Returns a list of the files in the database as L<MongoDB::GridFS::File>
#pod objects.
#pod
#pod =cut

sub all {
    my ($self) = @_;
    my @ret;

    my $cursor = $self->files->find({});
    while (my $meta = $cursor->next) {
        push @ret, MongoDB::GridFS::File->new(
            _grid => $self,
            info => $meta);
    }
    return @ret;
}

#--------------------------------------------------------------------------#
# private methods
#--------------------------------------------------------------------------#

sub _dynamic_write_concern {
    my ( $self, $opts ) = @_;

    my $wc = $self->write_concern;

    if ( !exists $opts->{safe} ) {
        return $wc;
    }
    elsif ( $opts->{safe} ) {
        return $wc->is_acknowledged ? $wc : MongoDB::WriteConcern->new( w => 1 );
    }
    else {
        return MongoDB::WriteConcern->new( w => 0 );
    }
}


1;

__END__

=pod

=encoding UTF-8

=head1 NAME

MongoDB::GridFS - A file storage abstraction (DEPRECATED)

=head1 VERSION

version v1.8.1

=head1 SYNOPSIS

    my $grid = $database->get_gridfs;
    my $fh = IO::File->new("myfile", "r");
    $grid->insert($fh, {"filename" => "mydbfile"});

=head1 DESCRIPTION

This class models a GridFS file store in a MongoDB database and provides an API
for interacting with it.

Generally, you never construct one of these directly with C<new>.  Instead, you
call C<get_gridfs> on a L<MongoDB::Database> object.

=head1 USAGE

=head2 API

There are two interfaces for GridFS: a file-system/collection-like interface
(insert, remove, drop, find_one) and a more general interface
(get, put, delete).  Their functionality is the almost identical (get, put and
delete are always safe ops, insert, remove, and find_one are optionally safe),
using one over the other is a matter of preference.

=head2 Error handling

Unless otherwise explicitly documented, all methods throw exceptions if
an error occurs.  The error types are documented in L<MongoDB::Error>.

To catch and handle errors, the L<Try::Tiny> and L<Safe::Isa> modules
are recommended:

    use Try::Tiny;
    use Safe::Isa; # provides $_isa

    try {
        $grid->get( $id )
    }
    catch {
        if ( $_->$_isa("MongoDB::TimeoutError" ) {
            ...
        }
        else {
            ...
        }
    };

To retry failures automatically, consider using L<Try::Tiny::Retry>.

=head1 ATTRIBUTES

=head2 chunk_size

The number of bytes per chunk.  Defaults to 261120 (255kb).

=head2 read_preference

A L<MongoDB::ReadPreference> object.  It may be initialized with a string
corresponding to one of the valid read preference modes or a hash reference
that will be coerced into a new MongoDB::ReadPreference object.
By default it will be inherited from a L<MongoDB::Database> object.

=head2 write_concern

A L<MongoDB::WriteConcern> object.  It may be initialized with a hash
reference that will be coerced into a new MongoDB::WriteConcern object.
By default it will be inherited from a L<MongoDB::Database> object.

=head2 max_time_ms

Specifies the default maximum amount of time in milliseconds that the
server should use for working on a query.

B<Note>: this will only be used for server versions 2.6 or greater, as that
was when the C<$maxTimeMS> meta-operator was introduced.

=head2 bson_codec

An object that provides the C<encode_one> and C<decode_one> methods, such
as from L<MongoDB::BSON>.  It may be initialized with a hash reference that
will be coerced into a new MongoDB::BSON object.  By default it will be
inherited from a L<MongoDB::Database> object.

=head2 prefix

The prefix used for the collections.  Defaults to "fs".

=head1 METHODS

=head2 get

    $file = $grid->get($id);

Get a file from GridFS based on its _id.  Returns a L<MongoDB::GridFS::File>.

To retrieve a file based on metadata like C<filename>, use the L</find_one>
method instead.

=head2 put

    $id = $grid->put($fh, $metadata);
    $id = $grid->put($fh, {filename => "pic.jpg"});

Inserts a file into GridFS, adding a L<MongoDB::OID> as the _id field if the
field is not already defined.  This is a wrapper for C<MongoDB::GridFS::insert>,
see that method below for more information.

Returns the _id field.

=head2 delete

    $grid->delete($id)

Removes the file with the given _id.  Will die if the remove is unsuccessful.
Does not return anything on success.

=head2 find_one

    $file = $grid->find_one({"filename" => "foo.txt"});
    $file = $grid->find_one($criteria, $fields);

Returns a matching MongoDB::GridFS::File or undef.

=head2 remove

    $grid->remove({"filename" => "foo.txt"});
    $grid->remove({"filename" => "foo.txt"}, $options);

Cleanly removes files from the database.  C<$options> is a hash of options for
the remove.

A hashref of options may be provided with the following keys:

=over 4

=item *

C<just_one>: If true, only one file matching the criteria will be removed.

=item *

C<safe>: (DEPRECATED) If true, each remove will be checked for success and die on failure.  Set the L</write_concern> attribute instead.

=back

This method doesn't return anything.

=head2 insert

    $id = $gridfs->insert($fh);
    $id = $gridfs->insert($fh, $metadata);
    $id = $gridfs->insert($fh, $metadata, $options);

    $id = $gridfs->insert($fh, {"content-type" => "text/html"});

Reads from a file handle into the database.  Saves the file with the given
metadata.  The file handle must be readable.

A hashref of options may be provided with the following keys:

=over 4

=item *

C<safe>: (DEPRECATED) Will do safe inserts and check the MD5 hash calculated by the database against an MD5 hash calculated by the local filesystem.  If the two hashes do not match, then the chunks already inserted will be removed and the program will die. Set the L</write_concern> attribute instead.

=back

Because C<MongoDB::GridFS::insert> takes a file handle, it can be used to insert
very long strings into the database (as well as files).  C<$fh> must be a
FileHandle (not just the native file handle type), so you can insert a string
with:

    # open the string like a file
    open($basic_fh, '<', \$very_long_string);

    # turn the file handle into a FileHandle
    $fh = FileHandle->new;
    $fh->fdopen($basic_fh, 'r');

    $gridfs->insert($fh);

=head2 drop

    $grid->drop;

Removes all files' metadata and contents.

=head2 all

    @files = $grid->all;

Returns a list of the files in the database as L<MongoDB::GridFS::File>
objects.

=head1 DEPRECATION

B<Note>: This class has been deprecated in favor of
L<MongoDB::GridFSBucket>, which implements the new, driver-standard GridFS
API.  It is also faster and more flexible than this class.  This class will
be removed in a future release and you are encouraged to migrate your
applications to L<MongoDB::GridFSBucket>.

=head1 SEE ALSO

Core documentation on GridFS: L<http://dochub.mongodb.org/core/gridfs>.

=head1 AUTHORS

=over 4

=item *

David Golden <david@mongodb.com>

=item *

Rassi <rassi@mongodb.com>

=item *

Mike Friedman <friedo@friedo.com>

=item *

Kristina Chodorow <k.chodorow@gmail.com>

=item *

Florian Ragwitz <rafl@debian.org>

=back

=head1 COPYRIGHT AND LICENSE

This software is Copyright (c) 2018 by MongoDB, Inc.

This is free software, licensed under:

  The Apache License, Version 2.0, January 2004

=cut