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//
// Copyright (c) 2012-2017 DreamWorks Animation LLC
//
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// Mozilla Public License 2.0 ( http://www.mozilla.org/MPL/2.0/ )
//
// Redistributions of source code must retain the above copyright
// and license notice and the following restrictions and disclaimer.
//
// * Neither the name of DreamWorks Animation nor the names of
// its contributors may be used to endorse or promote products derived
// from this software without specific prior written permission.
//
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///////////////////////////////////////////////////////////////////////////
/// @author Ken Museth
///
/// @file tools/LevelSetAdvect.h
///
/// @brief Hyperbolic advection of narrow-band level sets
#ifndef OPENVDB_TOOLS_LEVEL_SET_ADVECT_HAS_BEEN_INCLUDED
#define OPENVDB_TOOLS_LEVEL_SET_ADVECT_HAS_BEEN_INCLUDED
#include <tbb/parallel_for.h>
#include <tbb/parallel_reduce.h>
#include <openvdb/Platform.h>
#include "LevelSetTracker.h"
#include "VelocityFields.h" // for EnrightField
#include <openvdb/math/FiniteDifference.h>
//#include <openvdb/util/CpuTimer.h>
#include <functional>
namespace openvdb {
OPENVDB_USE_VERSION_NAMESPACE
namespace OPENVDB_VERSION_NAME {
namespace tools {
/// @brief Hyperbolic advection of narrow-band level sets in an
/// external velocity field
///
/// The @c FieldType template argument below refers to any functor
/// with the following interface (see tools/VelocityFields.h
/// for examples):
///
/// @code
/// class VelocityField {
/// ...
/// public:
/// openvdb::VectorType operator() (const openvdb::Coord& xyz, ValueType time) const;
/// ...
/// };
/// @endcode
///
/// @note The functor method returns the velocity field at coordinate
/// position xyz of the advection grid, and for the specified
/// time. Note that since the velocity is returned in the local
/// coordinate space of the grid that is being advected, the functor
/// typically depends on the transformation of that grid. This design
/// is chosen for performance reasons. Finally we will assume that the
/// functor method is NOT threadsafe (typically uses a ValueAccessor)
/// and that its lightweight enough that we can copy it per thread.
///
/// The @c InterruptType template argument below refers to any class
/// with the following interface:
/// @code
/// class Interrupter {
/// ...
/// public:
/// void start(const char* name = nullptr) // called when computations begin
/// void end() // called when computations end
/// bool wasInterrupted(int percent=-1) // return true to break computation
///};
/// @endcode
///
/// @note If no template argument is provided for this InterruptType
/// the util::NullInterrupter is used which implies that all
/// interrupter calls are no-ops (i.e. incurs no computational overhead).
///
template<typename GridT,
typename FieldT = EnrightField<typename GridT::ValueType>,
typename InterruptT = util::NullInterrupter>
class LevelSetAdvection
{
public:
using GridType = GridT;
using TrackerT = LevelSetTracker<GridT, InterruptT>;
using LeafRange = typename TrackerT::LeafRange;
using LeafType = typename TrackerT::LeafType;
using BufferType = typename TrackerT::BufferType;
using ValueType = typename TrackerT::ValueType;
using VectorType = typename FieldT::VectorType;
/// Main constructor
LevelSetAdvection(GridT& grid, const FieldT& field, InterruptT* interrupt = nullptr):
mTracker(grid, interrupt), mField(field),
mSpatialScheme(math::HJWENO5_BIAS),
mTemporalScheme(math::TVD_RK2) {}
virtual ~LevelSetAdvection() {}
/// @brief Return the spatial finite difference scheme
math::BiasedGradientScheme getSpatialScheme() const { return mSpatialScheme; }
/// @brief Set the spatial finite difference scheme
void setSpatialScheme(math::BiasedGradientScheme scheme) { mSpatialScheme = scheme; }
/// @brief Return the temporal integration scheme
math::TemporalIntegrationScheme getTemporalScheme() const { return mTemporalScheme; }
/// @brief Set the spatial finite difference scheme
void setTemporalScheme(math::TemporalIntegrationScheme scheme) { mTemporalScheme = scheme; }
/// @brief Return the spatial finite difference scheme
math::BiasedGradientScheme getTrackerSpatialScheme() const {
return mTracker.getSpatialScheme();
}
/// @brief Set the spatial finite difference scheme
void setTrackerSpatialScheme(math::BiasedGradientScheme scheme) {
mTracker.setSpatialScheme(scheme);
}
/// @brief Return the temporal integration scheme
math::TemporalIntegrationScheme getTrackerTemporalScheme() const {
return mTracker.getTemporalScheme();
}
/// @brief Set the spatial finite difference scheme
void setTrackerTemporalScheme(math::TemporalIntegrationScheme scheme) {
mTracker.setTemporalScheme(scheme);
}
/// @brief Return The number of normalizations performed per track or
/// normalize call.
int getNormCount() const { return mTracker.getNormCount(); }
/// @brief Set the number of normalizations performed per track or
/// normalize call.
void setNormCount(int n) { mTracker.setNormCount(n); }
/// @brief Return the grain-size used for multi-threading
int getGrainSize() const { return mTracker.getGrainSize(); }
/// @brief Set the grain-size used for multi-threading.
/// @note A grain size of 0 or less disables multi-threading!
void setGrainSize(int grainsize) { mTracker.setGrainSize(grainsize); }
/// Advect the level set from its current time, time0, to its
/// final time, time1. If time0>time1 backward advection is performed.
///
/// @return number of CFL iterations used to advect from time0 to time1
size_t advect(ValueType time0, ValueType time1);
private:
// disallow copy construction and copy by assinment!
LevelSetAdvection(const LevelSetAdvection&);// not implemented
LevelSetAdvection& operator=(const LevelSetAdvection&);// not implemented
// This templated private struct implements all the level set magic.
template<typename MapT, math::BiasedGradientScheme SpatialScheme,
math::TemporalIntegrationScheme TemporalScheme>
struct Advect
{
/// Main constructor
Advect(LevelSetAdvection& parent);
/// Shallow copy constructor called by tbb::parallel_for() threads
Advect(const Advect& other);
/// Destructor
virtual ~Advect() { if (mIsMaster) this->clearField(); }
/// Advect the level set from its current time, time0, to its final time, time1.
/// @return number of CFL iterations
size_t advect(ValueType time0, ValueType time1);
/// Used internally by tbb::parallel_for()
void operator()(const LeafRange& r) const
{
if (mTask) mTask(const_cast<Advect*>(this), r);
else OPENVDB_THROW(ValueError, "task is undefined - don\'t call this method directly");
}
/// method calling tbb
void cook(const char* msg, size_t swapBuffer = 0);
/// Sample field and return the CFL time step
typename GridT::ValueType sampleField(ValueType time0, ValueType time1);
template <bool Aligned> void sample(const LeafRange& r, ValueType t0, ValueType t1);
inline void sampleXformed(const LeafRange& r, ValueType t0, ValueType t1)
{
this->sample<false>(r, t0, t1);
}
inline void sampleAligned(const LeafRange& r, ValueType t0, ValueType t1)
{
this->sample<true>(r, t0, t1);
}
void clearField();
// Convex combination of Phi and a forward Euler advection steps:
// Phi(result) = alpha * Phi(phi) + (1-alpha) * (Phi(0) - dt * Speed(speed)*|Grad[Phi(0)]|);
template <int Nominator, int Denominator>
void euler(const LeafRange&, ValueType, Index, Index);
inline void euler01(const LeafRange& r, ValueType t) {this->euler<0,1>(r, t, 0, 1);}
inline void euler12(const LeafRange& r, ValueType t) {this->euler<1,2>(r, t, 1, 1);}
inline void euler34(const LeafRange& r, ValueType t) {this->euler<3,4>(r, t, 1, 2);}
inline void euler13(const LeafRange& r, ValueType t) {this->euler<1,3>(r, t, 1, 2);}
LevelSetAdvection& mParent;
VectorType* mVelocity;
size_t* mOffsets;
const MapT* mMap;
typename std::function<void (Advect*, const LeafRange&)> mTask;
const bool mIsMaster;
}; // end of private Advect struct
template<math::BiasedGradientScheme SpatialScheme>
size_t advect1(ValueType time0, ValueType time1);
template<math::BiasedGradientScheme SpatialScheme,
math::TemporalIntegrationScheme TemporalScheme>
size_t advect2(ValueType time0, ValueType time1);
template<math::BiasedGradientScheme SpatialScheme,
math::TemporalIntegrationScheme TemporalScheme,
typename MapType>
size_t advect3(ValueType time0, ValueType time1);
TrackerT mTracker;
//each thread needs a deep copy of the field since it might contain a ValueAccessor
const FieldT mField;
math::BiasedGradientScheme mSpatialScheme;
math::TemporalIntegrationScheme mTemporalScheme;
};//end of LevelSetAdvection
template<typename GridT, typename FieldT, typename InterruptT>
inline size_t
LevelSetAdvection<GridT, FieldT, InterruptT>::advect(ValueType time0, ValueType time1)
{
switch (mSpatialScheme) {
case math::FIRST_BIAS:
return this->advect1<math::FIRST_BIAS >(time0, time1);
case math::SECOND_BIAS:
return this->advect1<math::SECOND_BIAS >(time0, time1);
case math::THIRD_BIAS:
return this->advect1<math::THIRD_BIAS >(time0, time1);
case math::WENO5_BIAS:
return this->advect1<math::WENO5_BIAS >(time0, time1);
case math::HJWENO5_BIAS:
return this->advect1<math::HJWENO5_BIAS>(time0, time1);
default:
OPENVDB_THROW(ValueError, "Spatial difference scheme not supported!");
}
return 0;
}
template<typename GridT, typename FieldT, typename InterruptT>
template<math::BiasedGradientScheme SpatialScheme>
inline size_t
LevelSetAdvection<GridT, FieldT, InterruptT>::advect1(ValueType time0, ValueType time1)
{
switch (mTemporalScheme) {
case math::TVD_RK1:
return this->advect2<SpatialScheme, math::TVD_RK1>(time0, time1);
case math::TVD_RK2:
return this->advect2<SpatialScheme, math::TVD_RK2>(time0, time1);
case math::TVD_RK3:
return this->advect2<SpatialScheme, math::TVD_RK3>(time0, time1);
default:
OPENVDB_THROW(ValueError, "Temporal integration scheme not supported!");
}
return 0;
}
template<typename GridT, typename FieldT, typename InterruptT>
template<math::BiasedGradientScheme SpatialScheme, math::TemporalIntegrationScheme TemporalScheme>
inline size_t
LevelSetAdvection<GridT, FieldT, InterruptT>::advect2(ValueType time0, ValueType time1)
{
const math::Transform& trans = mTracker.grid().transform();
if (trans.mapType() == math::UniformScaleMap::mapType()) {
return this->advect3<SpatialScheme, TemporalScheme, math::UniformScaleMap>(time0, time1);
} else if (trans.mapType() == math::UniformScaleTranslateMap::mapType()) {
return this->advect3<SpatialScheme, TemporalScheme, math::UniformScaleTranslateMap>(
time0, time1);
} else if (trans.mapType() == math::UnitaryMap::mapType()) {
return this->advect3<SpatialScheme, TemporalScheme, math::UnitaryMap >(time0, time1);
} else if (trans.mapType() == math::TranslationMap::mapType()) {
return this->advect3<SpatialScheme, TemporalScheme, math::TranslationMap>(time0, time1);
} else {
OPENVDB_THROW(ValueError, "MapType not supported!");
}
return 0;
}
template<typename GridT, typename FieldT, typename InterruptT>
template<
math::BiasedGradientScheme SpatialScheme,
math::TemporalIntegrationScheme TemporalScheme,
typename MapT>
inline size_t
LevelSetAdvection<GridT, FieldT, InterruptT>::advect3(ValueType time0, ValueType time1)
{
Advect<MapT, SpatialScheme, TemporalScheme> tmp(*this);
return tmp.advect(time0, time1);
}
///////////////////////////////////////////////////////////////////////
template<typename GridT, typename FieldT, typename InterruptT>
template<
typename MapT,
math::BiasedGradientScheme SpatialScheme,
math::TemporalIntegrationScheme TemporalScheme>
inline
LevelSetAdvection<GridT, FieldT, InterruptT>::
Advect<MapT, SpatialScheme, TemporalScheme>::
Advect(LevelSetAdvection& parent)
: mParent(parent)
, mVelocity(nullptr)
, mOffsets(nullptr)
, mMap(parent.mTracker.grid().transform().template constMap<MapT>().get())
, mTask(0)
, mIsMaster(true)
{
}
template<typename GridT, typename FieldT, typename InterruptT>
template<
typename MapT,
math::BiasedGradientScheme SpatialScheme,
math::TemporalIntegrationScheme TemporalScheme>
inline
LevelSetAdvection<GridT, FieldT, InterruptT>::
Advect<MapT, SpatialScheme, TemporalScheme>::
Advect(const Advect& other)
: mParent(other.mParent)
, mVelocity(other.mVelocity)
, mOffsets(other.mOffsets)
, mMap(other.mMap)
, mTask(other.mTask)
, mIsMaster(false)
{
}
template<typename GridT, typename FieldT, typename InterruptT>
template<
typename MapT,
math::BiasedGradientScheme SpatialScheme,
math::TemporalIntegrationScheme TemporalScheme>
inline size_t
LevelSetAdvection<GridT, FieldT, InterruptT>::
Advect<MapT, SpatialScheme, TemporalScheme>::
advect(ValueType time0, ValueType time1)
{
namespace ph = std::placeholders;
//util::CpuTimer timer;
size_t countCFL = 0;
if ( math::isZero(time0 - time1) ) return countCFL;
const bool isForward = time0 < time1;
while ((isForward ? time0<time1 : time0>time1) && mParent.mTracker.checkInterrupter()) {
/// Make sure we have enough temporal auxiliary buffers
//timer.start( "\nallocate buffers" );
mParent.mTracker.leafs().rebuildAuxBuffers(TemporalScheme == math::TVD_RK3 ? 2 : 1);
//timer.stop();
const ValueType dt = this->sampleField(time0, time1);
if ( math::isZero(dt) ) break;//V is essentially zero so terminate
OPENVDB_NO_UNREACHABLE_CODE_WARNING_BEGIN //switch is resolved at compile-time
switch(TemporalScheme) {
case math::TVD_RK1:
// Perform one explicit Euler step: t1 = t0 + dt
// Phi_t1(1) = Phi_t0(0) - dt * VdotG_t0(0)
mTask = std::bind(&Advect::euler01, ph::_1, ph::_2, dt);
// Cook and swap buffer 0 and 1 such that Phi_t1(0) and Phi_t0(1)
this->cook("Advecting level set using TVD_RK1", 1);
break;
case math::TVD_RK2:
// Perform one explicit Euler step: t1 = t0 + dt
// Phi_t1(1) = Phi_t0(0) - dt * VdotG_t0(0)
mTask = std::bind(&Advect::euler01, ph::_1, ph::_2, dt);
// Cook and swap buffer 0 and 1 such that Phi_t1(0) and Phi_t0(1)
this->cook("Advecting level set using TVD_RK1 (step 1 of 2)", 1);
// Convex combine explict Euler step: t2 = t0 + dt
// Phi_t2(1) = 1/2 * Phi_t0(1) + 1/2 * (Phi_t1(0) - dt * V.Grad_t1(0))
mTask = std::bind(&Advect::euler12, ph::_1, ph::_2, dt);
// Cook and swap buffer 0 and 1 such that Phi_t2(0) and Phi_t1(1)
this->cook("Advecting level set using TVD_RK1 (step 2 of 2)", 1);
break;
case math::TVD_RK3:
// Perform one explicit Euler step: t1 = t0 + dt
// Phi_t1(1) = Phi_t0(0) - dt * VdotG_t0(0)
mTask = std::bind(&Advect::euler01, ph::_1, ph::_2, dt);
// Cook and swap buffer 0 and 1 such that Phi_t1(0) and Phi_t0(1)
this->cook("Advecting level set using TVD_RK3 (step 1 of 3)", 1);
// Convex combine explict Euler step: t2 = t0 + dt/2
// Phi_t2(2) = 3/4 * Phi_t0(1) + 1/4 * (Phi_t1(0) - dt * V.Grad_t1(0))
mTask = std::bind(&Advect::euler34, ph::_1, ph::_2, dt);
// Cook and swap buffer 0 and 2 such that Phi_t2(0) and Phi_t1(2)
this->cook("Advecting level set using TVD_RK3 (step 2 of 3)", 2);
// Convex combine explict Euler step: t3 = t0 + dt
// Phi_t3(2) = 1/3 * Phi_t0(1) + 2/3 * (Phi_t2(0) - dt * V.Grad_t2(0)
mTask = std::bind(&Advect::euler13, ph::_1, ph::_2, dt);
// Cook and swap buffer 0 and 2 such that Phi_t3(0) and Phi_t2(2)
this->cook("Advecting level set using TVD_RK3 (step 3 of 3)", 2);
break;
default:
OPENVDB_THROW(ValueError, "Temporal integration scheme not supported!");
}//end of compile-time resolved switch
OPENVDB_NO_UNREACHABLE_CODE_WARNING_END
time0 += isForward ? dt : -dt;
++countCFL;
mParent.mTracker.leafs().removeAuxBuffers();
this->clearField();
/// Track the narrow band
mParent.mTracker.track();
}//end wile-loop over time
return countCFL;//number of CLF propagation steps
}
template<typename GridT, typename FieldT, typename InterruptT>
template<
typename MapT,
math::BiasedGradientScheme SpatialScheme,
math::TemporalIntegrationScheme TemporalScheme>
inline typename GridT::ValueType
LevelSetAdvection<GridT, FieldT, InterruptT>::
Advect<MapT, SpatialScheme, TemporalScheme>::
sampleField(ValueType time0, ValueType time1)
{
namespace ph = std::placeholders;
const int grainSize = mParent.mTracker.getGrainSize();
const size_t leafCount = mParent.mTracker.leafs().leafCount();
if (leafCount==0) return ValueType(0.0);
// Compute the prefix sum of offsets to active voxels
size_t size=0, voxelCount=mParent.mTracker.leafs().getPrefixSum(mOffsets, size, grainSize);
// Sample the velocity field
if (mParent.mField.transform() == mParent.mTracker.grid().transform()) {
mTask = std::bind(&Advect::sampleAligned, ph::_1, ph::_2, time0, time1);
} else {
mTask = std::bind(&Advect::sampleXformed, ph::_1, ph::_2, time0, time1);
}
assert(voxelCount == mParent.mTracker.grid().activeVoxelCount());
mVelocity = new VectorType[ voxelCount ];
this->cook("Sampling advection field");
// Find the extrema of the magnitude of the velocities
ValueType maxAbsV = 0;
VectorType* v = mVelocity;
for (size_t i = 0; i < voxelCount; ++i, ++v) {
maxAbsV = math::Max(maxAbsV, ValueType(v->lengthSqr()));
}
// Compute the CFL number
if (math::isApproxZero(maxAbsV, math::Delta<ValueType>::value())) return ValueType(0);
#ifndef _MSC_VER // Visual C++ doesn't guarantee thread-safe initialization of local statics
static
#endif
const ValueType CFL = (TemporalScheme == math::TVD_RK1 ? ValueType(0.3) :
TemporalScheme == math::TVD_RK2 ? ValueType(0.9) :
ValueType(1.0))/math::Sqrt(ValueType(3.0));
const ValueType dt = math::Abs(time1 - time0), dx = mParent.mTracker.voxelSize();
return math::Min(dt, ValueType(CFL*dx/math::Sqrt(maxAbsV)));
}
template<typename GridT, typename FieldT, typename InterruptT>
template<
typename MapT,
math::BiasedGradientScheme SpatialScheme,
math::TemporalIntegrationScheme TemporalScheme>
template<bool Aligned>
inline void
LevelSetAdvection<GridT, FieldT, InterruptT>::
Advect<MapT, SpatialScheme, TemporalScheme>::
sample(const LeafRange& range, ValueType time0, ValueType time1)
{
const bool isForward = time0 < time1;
using VoxelIterT = typename LeafType::ValueOnCIter;
const MapT& map = *mMap;
const FieldT field( mParent.mField );
mParent.mTracker.checkInterrupter();
for (typename LeafRange::Iterator leafIter = range.begin(); leafIter; ++leafIter) {
VectorType* vel = mVelocity + mOffsets[ leafIter.pos() ];
for (VoxelIterT iter = leafIter->cbeginValueOn(); iter; ++iter, ++vel) {
const VectorType v = Aligned ? field(iter.getCoord(), time0) ://resolved at compile time
field(map.applyMap(iter.getCoord().asVec3d()), time0);
*vel = isForward ? v : -v;
}
}
}
template<typename GridT, typename FieldT, typename InterruptT>
template<
typename MapT,
math::BiasedGradientScheme SpatialScheme,
math::TemporalIntegrationScheme TemporalScheme>
inline void
LevelSetAdvection<GridT, FieldT, InterruptT>::
Advect<MapT, SpatialScheme, TemporalScheme>::
clearField()
{
delete [] mOffsets;
delete [] mVelocity;
mOffsets = nullptr;
mVelocity = nullptr;
}
template<typename GridT, typename FieldT, typename InterruptT>
template<
typename MapT,
math::BiasedGradientScheme SpatialScheme,
math::TemporalIntegrationScheme TemporalScheme>
inline void
LevelSetAdvection<GridT, FieldT, InterruptT>::
Advect<MapT, SpatialScheme, TemporalScheme>::
cook(const char* msg, size_t swapBuffer)
{
mParent.mTracker.startInterrupter( msg );
const int grainSize = mParent.mTracker.getGrainSize();
const LeafRange range = mParent.mTracker.leafs().leafRange(grainSize);
grainSize == 0 ? (*this)(range) : tbb::parallel_for(range, *this);
mParent.mTracker.leafs().swapLeafBuffer(swapBuffer, grainSize == 0);
mParent.mTracker.endInterrupter();
}
// Convex combination of Phi and a forward Euler advection steps:
// Phi(result) = alpha * Phi(phi) + (1-alpha) * (Phi(0) - dt * V.Grad(0));
template<typename GridT, typename FieldT, typename InterruptT>
template<
typename MapT,
math::BiasedGradientScheme SpatialScheme,
math::TemporalIntegrationScheme TemporalScheme>
template <int Nominator, int Denominator>
inline void
LevelSetAdvection<GridT, FieldT, InterruptT>::
Advect<MapT, SpatialScheme, TemporalScheme>::
euler(const LeafRange& range, ValueType dt, Index phiBuffer, Index resultBuffer)
{
using SchemeT = math::BIAS_SCHEME<SpatialScheme>;
using StencilT = typename SchemeT::template ISStencil<GridType>::StencilType;
using VoxelIterT = typename LeafType::ValueOnCIter;
using GradT = math::GradientBiased<MapT, SpatialScheme>;
static const ValueType Alpha = ValueType(Nominator)/ValueType(Denominator);
static const ValueType Beta = ValueType(1) - Alpha;
mParent.mTracker.checkInterrupter();
const MapT& map = *mMap;
StencilT stencil(mParent.mTracker.grid());
for (typename LeafRange::Iterator leafIter = range.begin(); leafIter; ++leafIter) {
const VectorType* vel = mVelocity + mOffsets[ leafIter.pos() ];
const ValueType* phi = leafIter.buffer(phiBuffer).data();
ValueType* result = leafIter.buffer(resultBuffer).data();
for (VoxelIterT voxelIter = leafIter->cbeginValueOn(); voxelIter; ++voxelIter, ++vel) {
const Index i = voxelIter.pos();
stencil.moveTo(voxelIter);
const ValueType a =
stencil.getValue() - dt * vel->dot(GradT::result(map, stencil, *vel));
result[i] = Nominator ? Alpha * phi[i] + Beta * a : a;
}//loop over active voxels in the leaf of the mask
}//loop over leafs of the level set
}
} // namespace tools
} // namespace OPENVDB_VERSION_NAME
} // namespace openvdb
#endif // OPENVDB_TOOLS_LEVEL_SET_ADVECT_HAS_BEEN_INCLUDED
// Copyright (c) 2012-2017 DreamWorks Animation LLC
// All rights reserved. This software is distributed under the
// Mozilla Public License 2.0 ( http://www.mozilla.org/MPL/2.0/ )
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