/usr/include/pbseq/pbdata/reads/PulseFileImpl.hpp is in libpbdata-dev 0~20161219-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 | #ifndef _BLASR_PULSE_FILE_IMPL_HPP_
#define _BLASR_PULSE_FILE_IMPL_HPP_
#include "../utils.hpp"
template<typename T_FieldType>
void PulseFile::StoreField(std::vector<T_FieldType> &source, int *basToPlsIndex, T_FieldType *dest, const DSLength destLength) {
for (DSLength i = 0 ; i < destLength; i++) {
dest[i] = source[basToPlsIndex[i]];
}
}
template <typename T>
bool PulseFile::Realloc(T *&ptr, const DNALength length) {
if (ptr != NULL) {
delete[] ptr;
}
ptr = ProtectedNew<T>(length);
return ptr != NULL;
}
#endif
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