/usr/include/sbml/packages/fbc/extension/FbcSBMLDocumentPlugin.h is in libsbml5-dev 5.16.0+dfsg-1.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 | /**
* @file FbcSBMLDocumentPlugin.h
* @brief Implementation of the FbcSBMLDocumentPlugin class
* @author SBMLTeam
*
* <!--------------------------------------------------------------------------
* This file is part of libSBML. Please visit http://sbml.org for more
* information about SBML, and the latest version of libSBML.
*
* Copyright (C) 2013-2017 jointly by the following organizations:
* 1. California Institute of Technology, Pasadena, CA, USA
* 2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
* 3. University of Heidelberg, Heidelberg, Germany
*
* Copyright (C) 2009-2013 jointly by the following organizations:
* 1. California Institute of Technology, Pasadena, CA, USA
* 2. EMBL European Bioinformatics Institute (EMBL-EBI), Hinxton, UK
*
* Copyright (C) 2006-2008 by the California Institute of Technology,
* Pasadena, CA, USA
*
* Copyright (C) 2002-2005 jointly by the following organizations:
* 1. California Institute of Technology, Pasadena, CA, USA
* 2. Japan Science and Technology Agency, Japan
*
* This library is free software; you can redistribute it and/or modify it
* under the terms of the GNU Lesser General Public License as published by
* the Free Software Foundation. A copy of the license agreement is provided
* in the file named "LICENSE.txt" included with this software distribution
* and also available online as http://sbml.org/software/libsbml/license.html
* ------------------------------------------------------------------------ -->
*
* @class FbcSBMLDocumentPlugin
* @sbmlbrief{fbc} Extension of SBMLDocument for the “fbc” package.
*
* The FbcSBMLDocumentPlugin class inherits from the SBMLDocumentPlugin
* class, and codifies the extensions to the SBMLDocument class defined in
* the SBML Level 3 @ref fbc (“fbc”) package. This
* extension defines a required flag named "required", which indicates
* whether “fbc” constructs can be used to change the core
* mathematical interpretation of the Model defined in the SBML input. Since
* “fbc” constructs cannot, this attribute must be set to the
* value @c "false".
*/
#ifndef FbcSBMLDocumentPlugin_H__
#define FbcSBMLDocumentPlugin_H__
#include <sbml/common/extern.h>
#ifdef __cplusplus
#include <sbml/extension/SBMLDocumentPlugin.h>
#include <sbml/packages/fbc/extension/FbcExtension.h>
LIBSBML_CPP_NAMESPACE_BEGIN
class LIBSBML_EXTERN FbcSBMLDocumentPlugin : public SBMLDocumentPlugin
{
public:
/**
* Creates a new FbcSBMLDocumentPlugin object using the given parameters.
*
* @copydetails doc_what_are_xmlnamespaces
*
* @copydetails doc_what_are_sbmlnamespaces
*
* @param uri the URI of the SBML Level 3 package implemented by
* this libSBML package extension.
*
* @param prefix the XML namespace prefix being used for the package.
*
* @param fbcns the namespaces object for the package.
*/
FbcSBMLDocumentPlugin(const std::string& uri, const std::string& prefix,
FbcPkgNamespaces* fbcns);
/**
* Copy constructor for FbcSBMLDocumentPlugin.
*
* @param orig the FbcSBMLDocumentPlugin instance to copy.
*/
FbcSBMLDocumentPlugin(const FbcSBMLDocumentPlugin& orig);
/**
* Assignment operator for FbcSBMLDocumentPlugin.
*
* @param rhs the object whose values are used as the basis
* of the assignment.
*/
FbcSBMLDocumentPlugin& operator=(const FbcSBMLDocumentPlugin& rhs);
/**
* Creates and returns a deep copy of this FbcSBMLDocumentPlugin object.
*
* @return a (deep) copy of this FbcSBMLDocumentPlugin object.
*/
virtual FbcSBMLDocumentPlugin* clone () const;
/**
* Destructor for FbcSBMLDocumentPlugin.
*/
virtual ~FbcSBMLDocumentPlugin();
#ifndef SWIG
/** @cond doxygenLibsbmlInternal */
/**
* Reads the attributes of corresponding package in SBMLDocument element
*/
virtual void readAttributes (const XMLAttributes& attributes,
const ExpectedAttributes& expectedAttributes);
/** @endcond */
#endif // SWIG
/** @cond doxygenLibsbmlInternal */
/**
* Returns boolean based on whether flattening of a comp model has been implemented.
*
* @returns @c true if flattening for composed models has been implemented,
* false otherwise.
*/
virtual bool isCompFlatteningImplemented() const;
/** @endcond */
/** @cond doxygenLibsbmlInternal */
/**
* Check consistency function.
*/
virtual unsigned int checkConsistency();
/** @endcond */
/** @cond doxygenLibsbmlInternal */
virtual bool accept(SBMLVisitor& v) const;
/** @endcond */
protected:
/** @cond doxygenLibsbmlInternal */
/** @endcond */
};
LIBSBML_CPP_NAMESPACE_END
#endif /* __cplusplus */
#endif /* FbcSBMLDocumentPlugin_H__ */
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