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// ************************************************************************
//
// Belos: Block Linear Solvers Package
// Copyright 2004 Sandia Corporation
//
// Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
// the U.S. Government retains certain rights in this software.
//
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// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
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// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Michael A. Heroux (maherou@sandia.gov)
//
// ************************************************************************
//@HEADER
//
// This file contains an implementation of the TFQMR iteration
// for solving non-Hermitian linear systems of equations Ax = b,
// where b is a single-vector and x is the corresponding solution.
//
// The implementation is a slight modification on the TFQMR iteration
// found in Saad's "Iterative Methods for Sparse Linear Systems".
//
#ifndef BELOS_TFQMR_ITER_HPP
#define BELOS_TFQMR_ITER_HPP
/*!
\file BelosTFQMRIter.hpp
\brief Belos concrete class for generating iterations with the
preconditioned tranpose-free QMR (TFQMR) method.
*/
#include "BelosConfigDefs.hpp"
#include "BelosIteration.hpp"
#include "BelosTypes.hpp"
#include "BelosLinearProblem.hpp"
#include "BelosOutputManager.hpp"
#include "BelosStatusTest.hpp"
#include "BelosOperatorTraits.hpp"
#include "BelosMultiVecTraits.hpp"
#include "Teuchos_BLAS.hpp"
#include "Teuchos_SerialDenseMatrix.hpp"
#include "Teuchos_SerialDenseVector.hpp"
#include "Teuchos_ScalarTraits.hpp"
#include "Teuchos_ParameterList.hpp"
#include "Teuchos_TimeMonitor.hpp"
/*! \class Belos::TFQMRIter
\brief This class implements the preconditioned transpose-free QMR algorithm for
solving non-Hermitian linear systems of equations Ax = b, where b is the right-hand
side vector and x is the corresponding solution.
\ingroup belos_solver_framework
\author Heidi Thornquist
*/
namespace Belos {
/** \brief Structure to contain pointers to TFQMRIter state variables.
*
* This struct is utilized by TFQMRIter::initialize() and TRQMRIter::getState().
*/
template <class ScalarType, class MV>
struct TFQMRIterState {
/*! \brief The current residual basis. */
Teuchos::RCP<const MV> R;
Teuchos::RCP<const MV> W;
Teuchos::RCP<const MV> U;
Teuchos::RCP<const MV> Rtilde;
Teuchos::RCP<const MV> D;
Teuchos::RCP<const MV> V;
TFQMRIterState() : R(Teuchos::null), W(Teuchos::null), U(Teuchos::null),
Rtilde(Teuchos::null), D(Teuchos::null), V(Teuchos::null)
{}
};
//! @name TFQMRIter Exceptions
//@{
/** \brief TFQMRIterInitFailure is thrown when the TFQMRIter object is unable to
* generate an initial iterate in the TFQMRIter::initialize() routine.
*
* This std::exception is thrown from the TFQMRIter::initialize() method, which is
* called by the user or from the TFQMRIter::iterate() method if isInitialized()
* == \c false.
*
* In the case that this std::exception is thrown,
* TFQMRIter::isInitialized() will be \c false and the user will need to provide
* a new initial iterate to the iteration.
*/
class TFQMRIterInitFailure : public BelosError {public:
TFQMRIterInitFailure(const std::string& what_arg) : BelosError(what_arg)
{}};
/** \brief TFQMRIterateFailure is thrown when the TFQMRIter object is unable to
* compute the next iterate in the TFQMRIter::iterate() routine.
*
* This std::exception is thrown from the TFQMRIter::iterate() method.
*
*/
class TFQMRIterateFailure : public BelosError {public:
TFQMRIterateFailure(const std::string& what_arg) : BelosError(what_arg)
{}};
//@}
template <class ScalarType, class MV, class OP>
class TFQMRIter : public Iteration<ScalarType,MV,OP> {
public:
//
// Convenience typedefs
//
typedef MultiVecTraits<ScalarType,MV> MVT;
typedef OperatorTraits<ScalarType,MV,OP> OPT;
typedef Teuchos::ScalarTraits<ScalarType> SCT;
typedef typename SCT::magnitudeType MagnitudeType;
//! @name Constructor/Destructor.
//@{
//! %Belos::TFQMRIter constructor.
TFQMRIter( const Teuchos::RCP<LinearProblem<ScalarType,MV,OP> > &problem,
const Teuchos::RCP<OutputManager<ScalarType> > &printer,
const Teuchos::RCP<StatusTest<ScalarType,MV,OP> > &tester,
Teuchos::ParameterList ¶ms );
//! %Belos::TFQMRIter destructor.
virtual ~TFQMRIter() {};
//@}
//! @name Solver methods
//@{
/*! \brief This method performs TFQMR iterations until the status
* test indicates the need to stop or an error occurs (in which case, an
* std::exception is thrown).
*
* iterate() will first determine whether the solver is initialized; if
* not, it will call initialize() using default arguments. After
* initialization, the solver performs TFQMR iterations until the
* status test evaluates as ::Passed, at which point the method returns to
* the caller.
*/
void iterate();
/*! \brief Initialize the solver to an iterate, providing a complete state.
*
* The %TFQMRIter contains a certain amount of state, consisting of the current
* Krylov basis and the associated Hessenberg matrix.
*
* initialize() gives the user the opportunity to manually set these,
* although this must be done with caution, abiding by the rules given
* below. All notions of orthogonality and orthonormality are derived from
* the inner product specified by the orthogonalization manager.
*
* \post
* <li>isInitialized() == \c true (see post-conditions of isInitialize())
*
* The user has the option of specifying any component of the state using
* initialize(). However, these arguments are assumed to match the
* post-conditions specified under isInitialized(). Any necessary component of the
* state not given to initialize() will be generated.
*
* \note For any pointer in \c newstate which directly points to the multivectors in
* the solver, the data is not copied.
*/
void initializeTFQMR(const TFQMRIterState<ScalarType,MV> & newstate);
/*! \brief Initialize the solver with the initial vectors from the linear problem
* or random data.
*/
void initialize()
{
TFQMRIterState<ScalarType,MV> empty;
initializeTFQMR(empty);
}
/*! \brief Get the current state of the linear solver.
*
* The data is only valid if isInitialized() == \c true.
*
* \returns A TFQMRIterState object containing const pointers to the current
* solver state.
*/
TFQMRIterState<ScalarType,MV> getState() const {
TFQMRIterState<ScalarType,MV> state;
state.R = R_;
state.W = W_;
state.U = U_;
state.Rtilde = Rtilde_;
state.D = D_;
state.V = V_;
state.solnUpdate = solnUpdate_;
return state;
}
//@}
//! @name Status methods
//@{
//! \brief Get the current iteration count.
int getNumIters() const { return iter_; }
//! \brief Reset the iteration count.
void resetNumIters( int iter = 0 ) { iter_ = iter; }
//! Get the norms of the residuals native to the solver.
//! \return A std::vector of length blockSize containing the native residuals.
Teuchos::RCP<const MV> getNativeResiduals( std::vector<MagnitudeType> *norms ) const;
//! Get the current update to the linear system.
/*! \note This method returns the accumulated update to the solution instead of updating
the linear problem, since it may incur an additional preconditioner application each iteration.
*/
Teuchos::RCP<MV> getCurrentUpdate() const { return solnUpdate_; }
//@}
//! @name Accessor methods
//@{
//! Get a constant reference to the linear problem.
const LinearProblem<ScalarType,MV,OP>& getProblem() const { return *lp_; }
//! Get the blocksize to be used by the iterative solver in solving this linear problem.
int getBlockSize() const { return 1; }
//! \brief Set the blocksize.
void setBlockSize(int blockSize) {
TEUCHOS_TEST_FOR_EXCEPTION(blockSize!=1,std::invalid_argument,
"Belos::TFQMRIter::setBlockSize(): Cannot use a block size that is not one.");
}
//! States whether the solver has been initialized or not.
bool isInitialized() { return initialized_; }
//@}
private:
//
// Internal methods
//
//! Method for initalizing the state storage needed by TFQMR.
void setStateSize();
//
// Classes inputed through constructor that define the linear problem to be solved.
//
const Teuchos::RCP<LinearProblem<ScalarType,MV,OP> > lp_;
const Teuchos::RCP<OutputManager<ScalarType> > om_;
const Teuchos::RCP<StatusTest<ScalarType,MV,OP> > stest_;
//
// Algorithmic parameters
//
// Storage for QR factorization of the least squares system.
// Teuchos::SerialDenseMatrix<int,ScalarType> alpha_, rho_, rho_old_;
std::vector<ScalarType> alpha_, rho_, rho_old_;
std::vector<MagnitudeType> tau_, cs_, theta_;
//
// Current solver state
//
// initialized_ specifies that the basis vectors have been initialized and the iterate() routine
// is capable of running; _initialize is controlled by the initialize() member method
// For the implications of the state of initialized_, please see documentation for initialize()
bool initialized_;
// stateStorageInitialized_ specifies that the state storage has be initialized to the current
// blockSize_ and numBlocks_. This initialization may be postponed if the linear problem was
// generated without the right-hand side or solution vectors.
bool stateStorageInitialized_;
// Current subspace dimension, and number of iterations performed.
int iter_;
//
// State Storage
//
Teuchos::RCP<MV> R_;
Teuchos::RCP<MV> W_;
Teuchos::RCP<MV> U_, AU_;
Teuchos::RCP<MV> Rtilde_;
Teuchos::RCP<MV> D_;
Teuchos::RCP<MV> V_;
Teuchos::RCP<MV> solnUpdate_;
};
//
// Implementation
//
//////////////////////////////////////////////////////////////////////////////////////////////////
// Constructor.
template <class ScalarType, class MV, class OP>
TFQMRIter<ScalarType,MV,OP>::TFQMRIter(const Teuchos::RCP<LinearProblem<ScalarType,MV,OP> > &problem,
const Teuchos::RCP<OutputManager<ScalarType> > &printer,
const Teuchos::RCP<StatusTest<ScalarType,MV,OP> > &tester,
Teuchos::ParameterList ¶ms
) :
lp_(problem),
om_(printer),
stest_(tester),
alpha_(1),
rho_(1),
rho_old_(1),
tau_(1),
cs_(1),
theta_(1),
initialized_(false),
stateStorageInitialized_(false),
iter_(0)
{
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// Compute native residual from TFQMR recurrence.
template <class ScalarType, class MV, class OP>
Teuchos::RCP<const MV>
TFQMRIter<ScalarType,MV,OP>::getNativeResiduals( std::vector<MagnitudeType> *normvec ) const
{
MagnitudeType one = Teuchos::ScalarTraits<MagnitudeType>::one();
if (normvec)
(*normvec)[0] = Teuchos::ScalarTraits<MagnitudeType>::squareroot( 2*iter_ + one )*tau_[0];
return Teuchos::null;
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// Setup the state storage.
template <class ScalarType, class MV, class OP>
void TFQMRIter<ScalarType,MV,OP>::setStateSize ()
{
if (!stateStorageInitialized_) {
// Check if there is any multivector to clone from.
Teuchos::RCP<const MV> lhsMV = lp_->getLHS();
Teuchos::RCP<const MV> rhsMV = lp_->getRHS();
if (lhsMV == Teuchos::null && rhsMV == Teuchos::null) {
stateStorageInitialized_ = false;
return;
}
else {
// Initialize the state storage
// If the subspace has not be initialized before, generate it using the LHS or RHS from lp_.
if (R_ == Teuchos::null) {
// Get the multivector that is not null.
Teuchos::RCP<const MV> tmp = ( (rhsMV!=Teuchos::null)? rhsMV: lhsMV );
TEUCHOS_TEST_FOR_EXCEPTION(tmp == Teuchos::null,std::invalid_argument,
"Belos::TFQMRIter::setStateSize(): linear problem does not specify multivectors to clone from.");
R_ = MVT::Clone( *tmp, 1 );
D_ = MVT::Clone( *tmp, 1 );
V_ = MVT::Clone( *tmp, 1 );
solnUpdate_ = MVT::Clone( *tmp, 1 );
}
// State storage has now been initialized.
stateStorageInitialized_ = true;
}
}
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// Initialize this iteration object
template <class ScalarType, class MV, class OP>
void TFQMRIter<ScalarType,MV,OP>::initializeTFQMR(const TFQMRIterState<ScalarType,MV> & newstate)
{
// Initialize the state storage if it isn't already.
if (!stateStorageInitialized_)
setStateSize();
TEUCHOS_TEST_FOR_EXCEPTION(!stateStorageInitialized_,std::invalid_argument,
"Belos::TFQMRIter::initialize(): Cannot initialize state storage!");
// NOTE: In TFQMRIter R_, the initial residual, is required!!!
//
std::string errstr("Belos::TFQMRIter::initialize(): Specified multivectors must have a consistent length and width.");
// Create convenience variables for zero and one.
const MagnitudeType MTzero = Teuchos::ScalarTraits<MagnitudeType>::zero();
if (newstate.R != Teuchos::null) {
TEUCHOS_TEST_FOR_EXCEPTION( MVT::GetGlobalLength(*newstate.R) != MVT::GetGlobalLength(*R_),
std::invalid_argument, errstr );
TEUCHOS_TEST_FOR_EXCEPTION( MVT::GetNumberVecs(*newstate.R) != 1,
std::invalid_argument, errstr );
// Copy basis vectors from newstate into V
if (newstate.R != R_) {
// copy over the initial residual (unpreconditioned).
MVT::Assign( *newstate.R, *R_ );
}
// Compute initial vectors
// Initially, they are set to the preconditioned residuals
//
W_ = MVT::CloneCopy( *R_ );
U_ = MVT::CloneCopy( *R_ );
Rtilde_ = MVT::CloneCopy( *R_ );
MVT::MvInit( *D_ );
MVT::MvInit( *solnUpdate_ );
// Multiply the current residual by Op and store in V_
// V_ = Op * R_
//
lp_->apply( *U_, *V_ );
AU_ = MVT::CloneCopy( *V_ );
//
// Compute initial scalars: theta, eta, tau, rho_old
//
theta_[0] = MTzero;
MVT::MvNorm( *R_, tau_ ); // tau = ||r_0||
MVT::MvDot( *R_, *Rtilde_, rho_old_ ); // rho = (r_tilde, r0)
}
else {
TEUCHOS_TEST_FOR_EXCEPTION(newstate.R == Teuchos::null,std::invalid_argument,
"Belos::TFQMRIter::initialize(): TFQMRIterState does not have initial residual.");
}
// The solver is initialized
initialized_ = true;
}
//////////////////////////////////////////////////////////////////////////////////////////////////
// Iterate until the status test informs us we should stop.
template <class ScalarType, class MV, class OP>
void TFQMRIter<ScalarType,MV,OP>::iterate()
{
//
// Allocate/initialize data structures
//
if (initialized_ == false) {
initialize();
}
// Create convenience variables for zero and one.
const ScalarType STone = Teuchos::ScalarTraits<ScalarType>::one();
const MagnitudeType MTone = Teuchos::ScalarTraits<MagnitudeType>::one();
const MagnitudeType MTzero = Teuchos::ScalarTraits<MagnitudeType>::zero();
const ScalarType STzero = Teuchos::ScalarTraits<ScalarType>::zero();
ScalarType eta = STzero, beta = STzero;
//
// Start executable statements.
//
// Get the current solution vector.
Teuchos::RCP<MV> cur_soln_vec = lp_->getCurrLHSVec();
// Check that the current solution vector only has one column.
TEUCHOS_TEST_FOR_EXCEPTION( MVT::GetNumberVecs(*cur_soln_vec) != 1, TFQMRIterateFailure,
"Belos::TFQMRIter::iterate(): current linear system has more than one vector!" );
////////////////////////////////////////////////////////////////
// Iterate until the status test tells us to stop.
//
while (stest_->checkStatus(this) != Passed) {
for (int iIter=0; iIter<2; iIter++)
{
//
//--------------------------------------------------------
// Compute the new alpha if we need to
//--------------------------------------------------------
//
if (iIter == 0) {
MVT::MvDot( *V_, *Rtilde_, alpha_ ); // alpha = rho / (r_tilde, v)
alpha_[0] = rho_old_[0]/alpha_[0];
}
//
//--------------------------------------------------------
// Update w.
// w = w - alpha*Au
//--------------------------------------------------------
//
MVT::MvAddMv( STone, *W_, -alpha_[0], *AU_, *W_ );
//
//--------------------------------------------------------
// Update d.
// d = u + (theta^2/alpha)eta*d
//--------------------------------------------------------
//
MVT::MvAddMv( STone, *U_, (theta_[0]*theta_[0]/alpha_[0])*eta, *D_, *D_ );
//
//--------------------------------------------------------
// Update u if we need to.
// u = u - alpha*v
//
// Note: This is usually computed with alpha (above), but we're trying be memory efficient.
//--------------------------------------------------------
//
if (iIter == 0) {
// Compute new U.
MVT::MvAddMv( STone, *U_, -alpha_[0], *V_, *U_ );
// Update Au for the next iteration.
lp_->apply( *U_, *AU_ );
}
//
//--------------------------------------------------------
// Compute the new theta, c, eta, tau; i.e. the update to the least squares solution.
//--------------------------------------------------------
//
MVT::MvNorm( *W_, theta_ ); // theta = ||w|| / tau
theta_[0] /= tau_[0];
// cs = 1.0 / sqrt(1.0 + theta^2)
cs_[0] = MTone / Teuchos::ScalarTraits<MagnitudeType>::squareroot(MTone + theta_[0]*theta_[0]);
tau_[0] *= theta_[0]*cs_[0]; // tau = tau * theta * cs
eta = cs_[0]*cs_[0]*alpha_[0]; // eta = cs^2 * alpha
//
//--------------------------------------------------------
// Update the solution.
// Don't update the linear problem object, may incur additional preconditioner application.
//--------------------------------------------------------
//
MVT::MvAddMv( STone, *solnUpdate_, eta, *D_, *solnUpdate_ );
//
//--------------------------------------------------------
// Check for breakdown before continuing.
//--------------------------------------------------------
if ( tau_[0] == MTzero ) {
break;
}
//
if (iIter == 1) {
//
//--------------------------------------------------------
// Compute the new rho, beta if we need to.
//--------------------------------------------------------
//
MVT::MvDot( *W_, *Rtilde_, rho_ ); // rho = (r_tilde, w)
beta = rho_[0]/rho_old_[0]; // beta = rho / rho_old
rho_old_[0] = rho_[0]; // rho_old = rho
//
//--------------------------------------------------------
// Update u, v, and Au if we need to.
// Note: We are updating v in two stages to be memory efficient
//--------------------------------------------------------
//
MVT::MvAddMv( STone, *W_, beta, *U_, *U_ ); // u = w + beta*u
// First stage of v update.
MVT::MvAddMv( STone, *AU_, beta, *V_, *V_ ); // v = Au + beta*v
// Update Au.
lp_->apply( *U_, *AU_ ); // Au = A*u
// Second stage of v update.
MVT::MvAddMv( STone, *AU_, beta, *V_, *V_ ); // v = Au + beta*v
}
}
// Increment the iteration
iter_++;
} // end while (sTest_->checkStatus(this) != Passed)
}
} // namespace Belos
//
#endif // BELOS_TFQMR_ITER_HPP
//
// End of file BelosTFQMRIter.hpp
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