This file is indexed.

/usr/include/trilinos/EpetraExt_HDF5_Handle.h is in libtrilinos-epetraext-dev 12.12.1-5.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
//@HEADER
// ***********************************************************************
//
//     EpetraExt: Epetra Extended - Linear Algebra Services Package
//                 Copyright (2011) Sandia Corporation
//
// Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
// the U.S. Government retains certain rights in this software.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Michael A. Heroux (maherou@sandia.gov)
//
// ***********************************************************************
//@HEADER

#ifndef EPETRAEXT_HDF5_HANDLE_H
#define EPETRAEXT_HDF5_HANDLE_H
#include "EpetraExt_ConfigDefs.h"
#ifdef HAVE_EPETRAEXT_HDF5

namespace EpetraExt {

class Handle 
{
  public:
    virtual ~Handle() {}

    //! Returns the local number of elements.
    virtual int NumMyElements() const = 0;

    //! Returns the global number of elements.
    virtual int NumGlobalElements() const = 0;

    //! Returns the identifier of the distributed object.
    virtual std::string Type() const = 0;

    virtual bool HasInt() const = 0;

    virtual bool HasDouble() const = 0;

    //! Returns the size of integer data for local element \c EID.
    virtual int IntSize(const int EID) const = 0;

    //! Returns the size of double data for local element \c EID.
    virtual int DoubleSize(const int EID) const = 0;

    //! Packs all global information.
    virtual int GetLabels(std::vector<std::string>& IntLabels, 
                  std::vector<std::string>& DoubleLabels) const = 0;

    //! Packs all global information.
    virtual int GetLabels(std::vector<std::string>& IntLabels, std::vector<int>& IntLabelsData,
                  std::vector<std::string>& DoubleLabels, std::vector<double>& DoubleLabelsData) const = 0;

    //! Sets global information
    virtual int SetLabels(const std::vector<int>& IntLabelsData,
                  const std::vector<double>& DoubleLabelsData) = 0;

    //! Packs all data for local element \c EID in the specified arrays.
    virtual int Pack(const int EID, int* IntData, double* DoubleData) const = 0;

    //! Unpacks all data for local element \c EID in the specified arrays.
    virtual int UnPack(const int EID, int IntSize, int* IntData, 
               int DoubleSize, double* DoubleData) = 0;

    //! Performs any initialization procedure \e before unpacking.
    virtual int Initialize() = 0;

    //! Performs any finalization procedure \e after unpacking.
    virtual int Finalize() = 0;
};

#include "Epetra_Vector.h"

class Epetra_Vector_Handle : public Handle
{
  public:
    Epetra_Vector_Handle(Epetra_Vector& obj) :
      obj_(&obj)
    {}

    //! Returns the local number of elements.
    int NumMyElements() const
    {
      return(obj_->Map().NumMyElements());
    }

    //! Returns the global number of elements.
    int NumGlobalElements() const
    {
      return(obj_->Map().NumGlobalElements());
    }

    //! Returns the identifier of the distributed object.
    std::string Type() const
    {
      return("Handle<Epetra_Vector>");
    }

    bool HasInt() const
    {
      return(false);
    }

    bool HasDouble() const
    {
      return(true);
    }

    //! Returns the size of integer data for local element \c EID.
    int IntSize(const int EID) const
    {
      return(0);
    }

    //! Returns the size of double data for local element \c EID.
    int DoubleSize(const int EID) const
    {
      return(1);
    }

    //! Packs all global information.
    int GetLabels(std::vector<std::string>& IntLabels, 
                  std::vector<std::string>& DoubleLabels) const
    {
      IntLabels.resize(0);
      DoubleLabels.resize(0);

      return(0);
    }

    //! Packs all global information.
    int GetLabels(std::vector<std::string>& IntLabels, std::vector<int>& IntLabelsData,
                  std::vector<std::string>& DoubleLabels, std::vector<double>& DoubleLabelsData) const
    {
      return(0);
    }

    //! Sets global information
    int SetLabels(const std::vector<int>& IntLabelsData,
                  const std::vector<double>& DoubleLabelsData)
    {
      return(0);
    }

    //! Packs all data for local element \c EID in the specified arrays.
    int Pack(const int EID, int* IntData, double* DoubleData) const
    {
      DoubleData[0] = (*obj_)[EID];

      return(0);
    }

    //! Unpacks all data for local element \c EID in the specified arrays.
    int UnPack(const int EID, int IntSize, int* IntData, 
               int DoubleSize, double* DoubleData)
    {
      (*obj_)[EID] = DoubleData[0];

      return(0);
    }

    //! Performs any initialization procedure \e before unpacking.
    int Initialize()
    {
      // do nothing here
      return(0);
    }

    //! Performs any finalization procedure \e after unpacking.
    int Finalize()
    {
      // do nothing here
      return(0);
    }

  private:
    Epetra_Vector* obj_;
};

} // namespace EpetraExt
#endif
#endif /* EPETRAEXT_HDF5_HANDLE_H */