/usr/include/trilinos/Ifpack2_AdditiveSchwarz_def.hpp is in libtrilinos-ifpack2-dev 12.12.1-5.
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// ***********************************************************************
//
// Ifpack2: Tempated Object-Oriented Algebraic Preconditioner Package
// Copyright (2009) Sandia Corporation
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// contributors may be used to endorse or promote products derived from
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/// \file Ifpack2_AdditiveSchwarz_def.hpp
/// \brief Definition of Ifpack2::AdditiveSchwarz, which implements
/// additive Schwarz preconditioning with an arbitrary subdomain
/// solver. For the declaration and class documentation, please see
/// Ifpack2_AdditiveSchwarz_decl.hpp in this directory.
///
/// If you want to use Ifpack2::AdditiveSchwarz directly in your
/// application, please include the automatically generated header
/// file Ifpack2_AdditiveSchwarz.hpp. In general, you should never
/// need to include Ifpack2_AdditiveSchwarz_def.hpp in your
/// application directly.
#ifndef IFPACK2_ADDITIVESCHWARZ_DEF_HPP
#define IFPACK2_ADDITIVESCHWARZ_DEF_HPP
#include "Trilinos_Details_LinearSolverFactory.hpp"
// We need Ifpack2's implementation of LinearSolver, because we use it
// to wrap the user-provided Ifpack2::Preconditioner in
// Ifpack2::AdditiveSchwarz::setInnerPreconditioner.
#include "Ifpack2_Details_LinearSolver.hpp"
#if defined(HAVE_IFPACK2_XPETRA) && defined(HAVE_IFPACK2_ZOLTAN2)
#include "Zoltan2_TpetraRowGraphAdapter.hpp"
#include "Zoltan2_OrderingProblem.hpp"
#include "Zoltan2_OrderingSolution.hpp"
#endif
#include "Ifpack2_Details_CanChangeMatrix.hpp"
#include "Ifpack2_LocalFilter.hpp"
#include "Ifpack2_OverlappingRowMatrix.hpp"
#include "Ifpack2_Parameters.hpp"
#include "Ifpack2_ReorderFilter.hpp"
#include "Ifpack2_SingletonFilter.hpp"
#ifdef HAVE_MPI
#include "Teuchos_DefaultMpiComm.hpp"
#endif
#include "Teuchos_StandardParameterEntryValidators.hpp"
#include <locale> // std::toupper
// FIXME (mfh 25 Aug 2015) Work-around for Bug 6392. This doesn't
// need to be a weak symbol because it only refers to a function in
// the Ifpack2 package.
namespace Ifpack2 {
namespace Details {
extern void registerLinearSolverFactory ();
} // namespace Details
} // namespace Ifpack2
namespace Ifpack2 {
template<class MatrixType, class LocalInverseType>
bool
AdditiveSchwarz<MatrixType, LocalInverseType>::hasInnerPrecName () const
{
const char* options[4] = {
"inner preconditioner name",
"subdomain solver name",
"schwarz: inner preconditioner name",
"schwarz: subdomain solver name"
};
const int numOptions = 4;
bool match = false;
for (int k = 0; k < numOptions && ! match; ++k) {
if (List_.isParameter (options[k])) {
return true;
}
}
return false;
}
template<class MatrixType, class LocalInverseType>
void
AdditiveSchwarz<MatrixType, LocalInverseType>::removeInnerPrecName ()
{
const char* options[4] = {
"inner preconditioner name",
"subdomain solver name",
"schwarz: inner preconditioner name",
"schwarz: subdomain solver name"
};
const int numOptions = 4;
for (int k = 0; k < numOptions; ++k) {
List_.remove (options[k], false);
}
}
template<class MatrixType, class LocalInverseType>
std::string
AdditiveSchwarz<MatrixType, LocalInverseType>::innerPrecName () const
{
const char* options[4] = {
"inner preconditioner name",
"subdomain solver name",
"schwarz: inner preconditioner name",
"schwarz: subdomain solver name"
};
const int numOptions = 4;
std::string newName;
bool match = false;
// As soon as one parameter option matches, ignore all others.
for (int k = 0; k < numOptions && ! match; ++k) {
if (List_.isParameter (options[k])) {
// try-catch block protects against incorrect type errors.
//
// FIXME (mfh 04 Jan 2013) We should instead catch and report
// type errors.
try {
newName = List_.get<std::string> (options[k]);
match = true;
} catch (...) {}
}
}
return match ? newName : defaultInnerPrecName ();
}
template<class MatrixType, class LocalInverseType>
void
AdditiveSchwarz<MatrixType, LocalInverseType>::removeInnerPrecParams ()
{
const char* options[4] = {
"inner preconditioner parameters",
"subdomain solver parameters",
"schwarz: inner preconditioner parameters",
"schwarz: subdomain solver parameters"
};
const int numOptions = 4;
// As soon as one parameter option matches, ignore all others.
for (int k = 0; k < numOptions; ++k) {
List_.remove (options[k], false);
}
}
template<class MatrixType, class LocalInverseType>
std::pair<Teuchos::ParameterList, bool>
AdditiveSchwarz<MatrixType, LocalInverseType>::innerPrecParams () const
{
const char* options[4] = {
"inner preconditioner parameters",
"subdomain solver parameters",
"schwarz: inner preconditioner parameters",
"schwarz: subdomain solver parameters"
};
const int numOptions = 4;
Teuchos::ParameterList params;
// As soon as one parameter option matches, ignore all others.
bool match = false;
for (int k = 0; k < numOptions && ! match; ++k) {
if (List_.isSublist (options[k])) {
params = List_.sublist (options[k]);
match = true;
}
}
// Default is an empty list of parameters.
return std::make_pair (params, match);
}
template<class MatrixType, class LocalInverseType>
std::string
AdditiveSchwarz<MatrixType, LocalInverseType>::defaultInnerPrecName ()
{
// The default inner preconditioner is "ILUT", for backwards
// compatibility with the original AdditiveSchwarz implementation.
return "ILUT";
}
template<class MatrixType, class LocalInverseType>
AdditiveSchwarz<MatrixType, LocalInverseType>::
AdditiveSchwarz (const Teuchos::RCP<const row_matrix_type>& A) :
Matrix_ (A),
IsInitialized_ (false),
IsComputed_ (false),
IsOverlapping_ (false),
OverlapLevel_ (0),
CombineMode_ (Tpetra::ZERO),
UseReordering_ (false),
ReorderingAlgorithm_ ("none"),
FilterSingletons_ (false),
NumIterations_(1),
ZeroStartingSolution_(true),
NumInitialize_ (0),
NumCompute_ (0),
NumApply_ (0),
InitializeTime_ (0.0),
ComputeTime_ (0.0),
ApplyTime_ (0.0)
{
Teuchos::ParameterList plist;
setParameters (plist); // Set parameters to default values
}
template<class MatrixType, class LocalInverseType>
AdditiveSchwarz<MatrixType, LocalInverseType>::
AdditiveSchwarz (const Teuchos::RCP<const row_matrix_type>& A,
const int overlapLevel) :
Matrix_ (A),
IsInitialized_ (false),
IsComputed_ (false),
IsOverlapping_ (false),
OverlapLevel_ (overlapLevel),
CombineMode_ (Tpetra::ZERO),
UseReordering_ (false),
ReorderingAlgorithm_ ("none"),
FilterSingletons_ (false),
NumIterations_(1),
ZeroStartingSolution_(true),
NumInitialize_ (0),
NumCompute_ (0),
NumApply_ (0),
InitializeTime_ (0.0),
ComputeTime_ (0.0),
ApplyTime_ (0.0)
{
Teuchos::ParameterList plist;
setParameters (plist); // Set parameters to default values
}
template<class MatrixType,class LocalInverseType>
AdditiveSchwarz<MatrixType,LocalInverseType>::~AdditiveSchwarz () {}
template<class MatrixType,class LocalInverseType>
Teuchos::RCP<const Tpetra::Map<typename MatrixType::local_ordinal_type, typename MatrixType::global_ordinal_type, typename MatrixType::node_type > >
AdditiveSchwarz<MatrixType,LocalInverseType>::getDomainMap() const
{
TEUCHOS_TEST_FOR_EXCEPTION(
Matrix_.is_null (), std::runtime_error, "Ifpack2::AdditiveSchwarz::"
"getDomainMap: The matrix to precondition is null. You must either pass "
"a nonnull matrix to the constructor, or call setMatrix() with a nonnull "
"input, before you may call this method.");
return Matrix_->getDomainMap ();
}
template<class MatrixType,class LocalInverseType>
Teuchos::RCP<const Tpetra::Map<typename MatrixType::local_ordinal_type, typename MatrixType::global_ordinal_type, typename MatrixType::node_type> >
AdditiveSchwarz<MatrixType,LocalInverseType>::getRangeMap () const
{
TEUCHOS_TEST_FOR_EXCEPTION(
Matrix_.is_null (), std::runtime_error, "Ifpack2::AdditiveSchwarz::"
"getRangeMap: The matrix to precondition is null. You must either pass "
"a nonnull matrix to the constructor, or call setMatrix() with a nonnull "
"input, before you may call this method.");
return Matrix_->getRangeMap ();
}
template<class MatrixType,class LocalInverseType>
Teuchos::RCP<const Tpetra::RowMatrix<typename MatrixType::scalar_type, typename MatrixType::local_ordinal_type, typename MatrixType::global_ordinal_type, typename MatrixType::node_type> > AdditiveSchwarz<MatrixType,LocalInverseType>::getMatrix() const
{
return Matrix_;
}
template<class MatrixType,class LocalInverseType>
void
AdditiveSchwarz<MatrixType,LocalInverseType>::
apply (const Tpetra::MultiVector<scalar_type,local_ordinal_type,global_ordinal_type,node_type> &B,
Tpetra::MultiVector<scalar_type,local_ordinal_type,global_ordinal_type,node_type> &Y,
Teuchos::ETransp mode,
scalar_type alpha,
scalar_type beta) const
{
using Teuchos::Time;
using Teuchos::TimeMonitor;
using Teuchos::RCP;
using Teuchos::rcp;
using Teuchos::rcp_dynamic_cast;
typedef Teuchos::ScalarTraits<scalar_type> STS;
const char prefix[] = "Ifpack2::AdditiveSchwarz::apply: ";
TEUCHOS_TEST_FOR_EXCEPTION
(! IsComputed_, std::runtime_error,
prefix << "isComputed() must be true before you may call apply().");
TEUCHOS_TEST_FOR_EXCEPTION
(Matrix_.is_null (), std::logic_error, prefix <<
"The input matrix A is null, but the preconditioner says that it has "
"been computed (isComputed() is true). This should never happen, since "
"setMatrix() should always mark the preconditioner as not computed if "
"its argument is null. "
"Please report this bug to the Ifpack2 developers.");
TEUCHOS_TEST_FOR_EXCEPTION
(Inverse_.is_null (), std::runtime_error,
prefix << "The subdomain solver is null. "
"This can only happen if you called setInnerPreconditioner() with a null "
"input, after calling initialize() or compute(). If you choose to call "
"setInnerPreconditioner() with a null input, you must then call it with "
"a nonnull input before you may call initialize() or compute().");
TEUCHOS_TEST_FOR_EXCEPTION
(B.getNumVectors() != Y.getNumVectors(), std::invalid_argument,
prefix << "B and Y must have the same number of columns. B has " <<
B.getNumVectors () << " columns, but Y has " << Y.getNumVectors() << ".");
TEUCHOS_TEST_FOR_EXCEPTION
(IsOverlapping_ && OverlappingMatrix_.is_null (), std::logic_error,
prefix << "The overlapping matrix is null. "
"This should never happen if IsOverlapping_ is true. "
"Please report this bug to the Ifpack2 developers.");
TEUCHOS_TEST_FOR_EXCEPTION
(! IsOverlapping_ && localMap_.is_null (), std::logic_error,
prefix << "localMap_ is null. "
"This should never happen if IsOverlapping_ is false. "
"Please report this bug to the Ifpack2 developers.");
TEUCHOS_TEST_FOR_EXCEPTION
(alpha != STS::one (), std::logic_error,
prefix << "Not implemented for alpha != 1.");
TEUCHOS_TEST_FOR_EXCEPTION
(beta != STS::zero (), std::logic_error,
prefix << "Not implemented for beta != 0.");
#ifdef HAVE_IFPACK2_DEBUG
{
typedef typename STS::magnitudeType magnitude_type;
typedef Teuchos::ScalarTraits<magnitude_type> STM;
Teuchos::Array<magnitude_type> norms (B.getNumVectors ());
B.norm2 (norms ());
bool good = true;
for (size_t j = 0; j < B.getNumVectors (); ++j) {
if (STM::isnaninf (norms[j])) {
good = false;
break;
}
}
TEUCHOS_TEST_FOR_EXCEPTION
(! good, std::runtime_error, "Ifpack2::AdditiveSchwarz::apply: "
"The 2-norm of the input B is NaN or Inf.");
}
#endif // HAVE_IFPACK2_DEBUG
#ifdef HAVE_IFPACK2_DEBUG
if (! ZeroStartingSolution_) {
typedef typename STS::magnitudeType magnitude_type;
typedef Teuchos::ScalarTraits<magnitude_type> STM;
Teuchos::Array<magnitude_type> norms (Y.getNumVectors ());
Y.norm2 (norms ());
bool good = true;
for (size_t j = 0; j < Y.getNumVectors (); ++j) {
if (STM::isnaninf (norms[j])) {
good = false;
break;
}
}
TEUCHOS_TEST_FOR_EXCEPTION
(! good, std::runtime_error, "Ifpack2::AdditiveSchwarz::apply: "
"On input, the initial guess Y has 2-norm NaN or Inf "
"(ZeroStartingSolution_ is false).");
}
#endif // HAVE_IFPACK2_DEBUG
const std::string timerName ("Ifpack2::AdditiveSchwarz::apply");
RCP<Time> timer = TimeMonitor::lookupCounter (timerName);
if (timer.is_null ()) {
timer = TimeMonitor::getNewCounter (timerName);
}
{ // Start timing here.
TimeMonitor timeMon (*timer);
const scalar_type ZERO = Teuchos::ScalarTraits<scalar_type>::zero ();
//const scalar_type ONE = Teuchos::ScalarTraits<scalar_type>::one (); // unused
const size_t numVectors = B.getNumVectors ();
// mfh 25 Apr 2015: Fix for currently failing
// Ifpack2_AdditiveSchwarz_RILUK test.
if (ZeroStartingSolution_) {
Y.putScalar (ZERO);
}
// set up for overlap communication
RCP<MV> OverlappingB,OverlappingY;
RCP<MV> globalOverlappingB;
if (IsOverlapping_) {
// MV's constructor fills with zeros.
OverlappingB = rcp (new MV (OverlappingMatrix_->getRowMap (), numVectors));
OverlappingY = rcp (new MV (OverlappingMatrix_->getRowMap (), numVectors));
}
else {
// MV's constructor fills with zeros.
//
// localMap_ has the same number of indices on each process that
// Matrix_->getRowMap() does on that process. Thus, we can do
// the Import step without creating a new MV, just by viewing
// OverlappingB using Matrix_->getRowMap ().
OverlappingB = rcp (new MV (localMap_, numVectors));
OverlappingY = rcp (new MV (localMap_, numVectors));
globalOverlappingB =
OverlappingB->offsetViewNonConst (Matrix_->getRowMap (), 0);
// Create Import object on demand, if necessary.
if (DistributedImporter_.is_null ()) {
// FIXME (mfh 15 Apr 2014) Why can't we just ask the Matrix
// for its Import object? Of course a general RowMatrix might
// not necessarily have one.
DistributedImporter_ =
rcp (new import_type (Matrix_->getRowMap (),
Matrix_->getDomainMap ()));
}
}
RCP<MV> R = rcp(new MV(B.getMap(),numVectors));
RCP<MV> C = rcp(new MV(Y.getMap(),numVectors)); //TODO no need to initialize to zero?
for (int ni=0; ni<NumIterations_; ++ni)
{
#ifdef HAVE_IFPACK2_DEBUG
{
typedef typename STS::magnitudeType magnitude_type;
typedef Teuchos::ScalarTraits<magnitude_type> STM;
Teuchos::Array<magnitude_type> norms (Y.getNumVectors ());
Y.norm2 (norms ());
bool good = true;
for (size_t j = 0;
j < Y.getNumVectors (); ++j) {
if (STM::isnaninf (norms[j])) {
good = false;
break;
}
}
TEUCHOS_TEST_FOR_EXCEPTION
(! good, std::runtime_error, "Ifpack2::AdditiveSchwarz::apply: "
"At top of iteration " << ni << ", the 2-norm of Y is NaN or Inf.");
}
#endif // HAVE_IFPACK2_DEBUG
Tpetra::deep_copy(*R, B);
// if (ZeroStartingSolution_ && ni == 0) {
// Y.putScalar (STS::zero ());
// }
if (!ZeroStartingSolution_ || ni > 0) {
//calculate residual
Matrix_->apply (Y, *R, mode, -STS::one(), STS::one());
#ifdef HAVE_IFPACK2_DEBUG
{
typedef typename STS::magnitudeType magnitude_type;
typedef Teuchos::ScalarTraits<magnitude_type> STM;
Teuchos::Array<magnitude_type> norms (R->getNumVectors ());
R->norm2 (norms ());
bool good = true;
for (size_t j = 0; j < R->getNumVectors (); ++j) {
if (STM::isnaninf (norms[j])) {
good = false;
break;
}
}
TEUCHOS_TEST_FOR_EXCEPTION
(! good, std::runtime_error, "Ifpack2::AdditiveSchwarz::apply: "
"At iteration " << ni << ", the 2-norm of R (result of computing "
"residual with Y) is NaN or Inf.");
}
#endif // HAVE_IFPACK2_DEBUG
}
typedef OverlappingRowMatrix<row_matrix_type> overlap_mat_type;
RCP<overlap_mat_type> overlapMatrix;
if (IsOverlapping_) {
overlapMatrix = rcp_dynamic_cast<overlap_mat_type> (OverlappingMatrix_);
TEUCHOS_TEST_FOR_EXCEPTION
(overlapMatrix.is_null (), std::logic_error, prefix <<
"IsOverlapping_ is true, but OverlappingMatrix_, while nonnull, is "
"not an OverlappingRowMatrix<row_matrix_type>. Please report this "
"bug to the Ifpack2 developers.");
}
// do communication if necessary
if (IsOverlapping_) {
TEUCHOS_TEST_FOR_EXCEPTION
(overlapMatrix.is_null (), std::logic_error, prefix
<< "overlapMatrix is null when it shouldn't be. "
"Please report this bug to the Ifpack2 developers.");
overlapMatrix->importMultiVector (*R, *OverlappingB, Tpetra::INSERT);
//JJH We don't need to import the solution Y we are always solving AY=R with initial guess zero
//if (ZeroStartingSolution_ == false)
// overlapMatrix->importMultiVector (Y, *OverlappingY, Tpetra::INSERT);
/*
FIXME from Ifpack1: Will not work with non-zero starting solutions.
TODO JJH 3/20/15 I don't know whether this comment is still valid.
Here is the log for the associated commit 720b2fa4 to Ifpack1:
"Added a note to recall that the nonzero starting solution will not
work properly if reordering, filtering or wider overlaps are used. This only
applied to methods like Jacobi, Gauss-Seidel, and SGS (in both point and block
version), and not to ILU-type preconditioners."
*/
#ifdef HAVE_IFPACK2_DEBUG
{
typedef typename STS::magnitudeType magnitude_type;
typedef Teuchos::ScalarTraits<magnitude_type> STM;
Teuchos::Array<magnitude_type> norms (OverlappingB->getNumVectors ());
OverlappingB->norm2 (norms ());
bool good = true;
for (size_t j = 0;
j < OverlappingB->getNumVectors (); ++j) {
if (STM::isnaninf (norms[j])) {
good = false;
break;
}
}
TEUCHOS_TEST_FOR_EXCEPTION
(! good, std::runtime_error, "Ifpack2::AdditiveSchwarz::apply: "
"At iteration " << ni << ", result of importMultiVector from R "
"to OverlappingB, has 2-norm NaN or Inf.");
}
#endif // HAVE_IFPACK2_DEBUG
} else {
globalOverlappingB->doImport (*R, *DistributedImporter_, Tpetra::INSERT);
#ifdef HAVE_IFPACK2_DEBUG
{
typedef typename STS::magnitudeType magnitude_type;
typedef Teuchos::ScalarTraits<magnitude_type> STM;
Teuchos::Array<magnitude_type> norms (globalOverlappingB->getNumVectors ());
globalOverlappingB->norm2 (norms ());
bool good = true;
for (size_t j = 0;
j < globalOverlappingB->getNumVectors (); ++j) {
if (STM::isnaninf (norms[j])) {
good = false;
break;
}
}
TEUCHOS_TEST_FOR_EXCEPTION
(! good, std::runtime_error, "Ifpack2::AdditiveSchwarz::apply: "
"At iteration " << ni << ", result of doImport from R, has 2-norm "
"NaN or Inf.");
}
#endif // HAVE_IFPACK2_DEBUG
}
#ifdef HAVE_IFPACK2_DEBUG
{
typedef typename STS::magnitudeType magnitude_type;
typedef Teuchos::ScalarTraits<magnitude_type> STM;
Teuchos::Array<magnitude_type> norms (OverlappingB->getNumVectors ());
OverlappingB->norm2 (norms ());
bool good = true;
for (size_t j = 0;
j < OverlappingB->getNumVectors (); ++j) {
if (STM::isnaninf (norms[j])) {
good = false;
break;
}
}
TEUCHOS_TEST_FOR_EXCEPTION
(! good, std::runtime_error, "Ifpack2::AdditiveSchwarz::apply: "
"At iteration " << ni << ", right before localApply, the 2-norm of "
"OverlappingB is NaN or Inf.");
}
#endif // HAVE_IFPACK2_DEBUG
// local solve
localApply(*OverlappingB, *OverlappingY);
#ifdef HAVE_IFPACK2_DEBUG
{
typedef typename STS::magnitudeType magnitude_type;
typedef Teuchos::ScalarTraits<magnitude_type> STM;
Teuchos::Array<magnitude_type> norms (OverlappingY->getNumVectors ());
OverlappingY->norm2 (norms ());
bool good = true;
for (size_t j = 0;
j < OverlappingY->getNumVectors (); ++j) {
if (STM::isnaninf (norms[j])) {
good = false;
break;
}
}
TEUCHOS_TEST_FOR_EXCEPTION
(! good, std::runtime_error, "Ifpack2::AdditiveSchwarz::apply: "
"At iteration " << ni << ", after localApply and before export / "
"copy, the 2-norm of OverlappingY is NaN or Inf.");
}
#endif // HAVE_IFPACK2_DEBUG
#ifdef HAVE_IFPACK2_DEBUG
{
typedef typename STS::magnitudeType magnitude_type;
typedef Teuchos::ScalarTraits<magnitude_type> STM;
Teuchos::Array<magnitude_type> norms (C->getNumVectors ());
C->norm2 (norms ());
bool good = true;
for (size_t j = 0;
j < C->getNumVectors (); ++j) {
if (STM::isnaninf (norms[j])) {
good = false;
break;
}
}
TEUCHOS_TEST_FOR_EXCEPTION
(! good, std::runtime_error, "Ifpack2::AdditiveSchwarz::apply: "
"At iteration " << ni << ", before export / copy, the 2-norm of C "
"is NaN or Inf.");
}
#endif // HAVE_IFPACK2_DEBUG
// do communication if necessary
if (IsOverlapping_) {
TEUCHOS_TEST_FOR_EXCEPTION
(overlapMatrix.is_null (), std::logic_error, prefix
<< "overlapMatrix is null when it shouldn't be. "
"Please report this bug to the Ifpack2 developers.");
overlapMatrix->exportMultiVector (*OverlappingY, *C, CombineMode_);
}
else {
// mfh 16 Apr 2014: Make a view of Y with the same Map as
// OverlappingY, so that we can copy OverlappingY into Y. This
// replaces code that iterates over all entries of OverlappingY,
// copying them one at a time into Y. That code assumed that
// the rows of Y and the rows of OverlappingY have the same
// global indices in the same order; see Bug 5992.
RCP<MV> C_view = C->offsetViewNonConst (OverlappingY->getMap (), 0);
Tpetra::deep_copy (*C_view, *OverlappingY);
}
#ifdef HAVE_IFPACK2_DEBUG
{
typedef typename STS::magnitudeType magnitude_type;
typedef Teuchos::ScalarTraits<magnitude_type> STM;
Teuchos::Array<magnitude_type> norms (C->getNumVectors ());
C->norm2 (norms ());
bool good = true;
for (size_t j = 0;
j < C->getNumVectors (); ++j) {
if (STM::isnaninf (norms[j])) {
good = false;
break;
}
}
TEUCHOS_TEST_FOR_EXCEPTION
(! good, std::runtime_error, "Ifpack2::AdditiveSchwarz::apply: "
"At iteration " << ni << ", before Y := C + Y, the 2-norm of C "
"is NaN or Inf.");
}
#endif // HAVE_IFPACK2_DEBUG
#ifdef HAVE_IFPACK2_DEBUG
{
typedef typename STS::magnitudeType magnitude_type;
typedef Teuchos::ScalarTraits<magnitude_type> STM;
Teuchos::Array<magnitude_type> norms (Y.getNumVectors ());
Y.norm2 (norms ());
bool good = true;
for (size_t j = 0;
j < Y.getNumVectors (); ++j) {
if (STM::isnaninf (norms[j])) {
good = false;
break;
}
}
TEUCHOS_TEST_FOR_EXCEPTION
(! good, std::runtime_error, "Ifpack2::AdditiveSchwarz::apply: "
"Before Y := C + Y, at iteration " << ni << ", the 2-norm of Y "
"is NaN or Inf.");
}
#endif // HAVE_IFPACK2_DEBUG
Y.update(STS::one(), *C, STS::one());
#ifdef HAVE_IFPACK2_DEBUG
{
typedef typename STS::magnitudeType magnitude_type;
typedef Teuchos::ScalarTraits<magnitude_type> STM;
Teuchos::Array<magnitude_type> norms (Y.getNumVectors ());
Y.norm2 (norms ());
bool good = true;
for (size_t j = 0; j < Y.getNumVectors (); ++j) {
if (STM::isnaninf (norms[j])) {
good = false;
break;
}
}
TEUCHOS_TEST_FOR_EXCEPTION
( ! good, std::runtime_error, "Ifpack2::AdditiveSchwarz::apply: "
"At iteration " << ni << ", after Y := C + Y, the 2-norm of Y "
"is NaN or Inf.");
}
#endif // HAVE_IFPACK2_DEBUG
}
} // Stop timing here.
#ifdef HAVE_IFPACK2_DEBUG
{
typedef typename STS::magnitudeType magnitude_type;
typedef Teuchos::ScalarTraits<magnitude_type> STM;
Teuchos::Array<magnitude_type> norms (Y.getNumVectors ());
Y.norm2 (norms ());
bool good = true;
for (size_t j = 0; j < Y.getNumVectors (); ++j) {
if (STM::isnaninf (norms[j])) {
good = false;
break;
}
}
TEUCHOS_TEST_FOR_EXCEPTION
( ! good, std::runtime_error, "Ifpack2::AdditiveSchwarz::apply: "
"The 2-norm of the output Y is NaN or Inf.");
}
#endif // HAVE_IFPACK2_DEBUG
++NumApply_;
// timer->totalElapsedTime() returns the total time over all timer
// calls. Thus, we use = instead of +=.
ApplyTime_ = timer->totalElapsedTime ();
}
template<class MatrixType,class LocalInverseType>
void
AdditiveSchwarz<MatrixType,LocalInverseType>::
localApply(MV &OverlappingB, MV &OverlappingY) const
{
using Teuchos::RCP;
using Teuchos::rcp_dynamic_cast;
const size_t numVectors = OverlappingB.getNumVectors ();
if (FilterSingletons_) {
// process singleton filter
MV ReducedB (SingletonMatrix_->getRowMap (), numVectors);
MV ReducedY (SingletonMatrix_->getRowMap (), numVectors);
RCP<SingletonFilter<row_matrix_type> > singletonFilter =
rcp_dynamic_cast<SingletonFilter<row_matrix_type> > (SingletonMatrix_);
TEUCHOS_TEST_FOR_EXCEPTION
(! SingletonMatrix_.is_null () && singletonFilter.is_null (),
std::logic_error, "Ifpack2::AdditiveSchwarz::localApply: "
"SingletonFilter_ is nonnull but is not a SingletonFilter"
"<row_matrix_type>. This should never happen. Please report this bug "
"to the Ifpack2 developers.");
singletonFilter->SolveSingletons (OverlappingB, OverlappingY);
singletonFilter->CreateReducedRHS (OverlappingY, OverlappingB, ReducedB);
// process reordering
if (! UseReordering_) {
Inverse_->solve (ReducedY, ReducedB);
}
else {
RCP<ReorderFilter<row_matrix_type> > rf =
rcp_dynamic_cast<ReorderFilter<row_matrix_type> > (ReorderedLocalizedMatrix_);
TEUCHOS_TEST_FOR_EXCEPTION
(! ReorderedLocalizedMatrix_.is_null () && rf.is_null (), std::logic_error,
"Ifpack2::AdditiveSchwarz::localApply: ReorderedLocalizedMatrix_ is "
"nonnull but is not a ReorderFilter<row_matrix_type>. This should "
"never happen. Please report this bug to the Ifpack2 developers.");
MV ReorderedB (ReducedB, Teuchos::Copy);
MV ReorderedY (ReducedY, Teuchos::Copy);
rf->permuteOriginalToReordered (ReducedB, ReorderedB);
Inverse_->solve (ReorderedY, ReorderedB);
rf->permuteReorderedToOriginal (ReorderedY, ReducedY);
}
// finish up with singletons
singletonFilter->UpdateLHS (ReducedY, OverlappingY);
}
else {
// process reordering
if (! UseReordering_) {
Inverse_->solve (OverlappingY, OverlappingB);
}
else {
MV ReorderedB (OverlappingB, Teuchos::Copy);
MV ReorderedY (OverlappingY, Teuchos::Copy);
RCP<ReorderFilter<row_matrix_type> > rf =
rcp_dynamic_cast<ReorderFilter<row_matrix_type> > (ReorderedLocalizedMatrix_);
TEUCHOS_TEST_FOR_EXCEPTION
(! ReorderedLocalizedMatrix_.is_null () && rf.is_null (), std::logic_error,
"Ifpack2::AdditiveSchwarz::localApply: ReorderedLocalizedMatrix_ is "
"nonnull but is not a ReorderFilter<row_matrix_type>. This should "
"never happen. Please report this bug to the Ifpack2 developers.");
rf->permuteOriginalToReordered (OverlappingB, ReorderedB);
Inverse_->solve (ReorderedY, ReorderedB);
rf->permuteReorderedToOriginal (ReorderedY, OverlappingY);
}
}
}
template<class MatrixType,class LocalInverseType>
void AdditiveSchwarz<MatrixType,LocalInverseType>::
setParameters (const Teuchos::ParameterList& plist)
{
// mfh 18 Nov 2013: Ifpack2's setParameters() method passes in the
// input list as const. This means that we have to copy it before
// validation or passing into setParameterList().
List_ = plist;
this->setParameterList (Teuchos::rcpFromRef (List_));
}
template<class MatrixType,class LocalInverseType>
void AdditiveSchwarz<MatrixType,LocalInverseType>::
setParameterList (const Teuchos::RCP<Teuchos::ParameterList>& plist)
{
using Tpetra::CombineMode;
using Teuchos::getIntegralValue;
using Teuchos::ParameterEntry;
using Teuchos::ParameterEntryValidator;
using Teuchos::ParameterList;
using Teuchos::RCP;
using Teuchos::rcp;
using Teuchos::rcp_dynamic_cast;
using Teuchos::StringToIntegralParameterEntryValidator;
if (plist.is_null ()) {
// Assume that the user meant to set default parameters by passing
// in an empty list.
this->setParameterList (rcp (new ParameterList ()));
}
// FIXME (mfh 26 Aug 2015) It's not necessarily true that plist is
// nonnull at this point.
// At this point, plist should be nonnull.
TEUCHOS_TEST_FOR_EXCEPTION(
plist.is_null (), std::logic_error, "Ifpack2::AdditiveSchwarz::"
"setParameterList: plist is null. This should never happen, since the "
"method should have replaced a null input list with a nonnull empty list "
"by this point. Please report this bug to the Ifpack2 developers.");
// TODO JJH 24March2015 The list needs to be validated. Not sure why this is commented out.
// try {
// List_.validateParameters (* getValidParameters ());
// }
// catch (std::exception& e) {
// std::cerr << "Ifpack2::AdditiveSchwarz::setParameterList: Validation failed with the following error message: " << e.what () << std::endl;
// throw e;
// }
// mfh 18 Nov 2013: Supplying the current value as the default value
// when calling ParameterList::get() ensures "delta" behavior when
// users pass in new parameters: any unspecified parameters in the
// new list retain their values in the old list. This preserves
// backwards compatiblity with this class' previous behavior. Note
// that validateParametersAndSetDefaults() would have different
// behavior: any parameters not in the new list would get default
// values, which could be different than their values in the
// original list.
bool gotCombineMode = false;
try {
CombineMode_ = getIntegralValue<Tpetra::CombineMode> (List_, "schwarz: combine mode");
gotCombineMode = true;
}
catch (Teuchos::Exceptions::InvalidParameterName&) {
// The caller didn't provide that parameter. Just keep the
// existing value of CombineMode_.
gotCombineMode = true;
}
catch (Teuchos::Exceptions::InvalidParameterType&) {
// The user perhaps supplied it as an Tpetra::CombineMode enum
// value. Let's try again (below). If it doesn't succeed, we
// know that the type is wrong, so we can let it throw whatever
// exception it would throw.
}
// Try to get the combine mode as an integer.
if (! gotCombineMode) {
try {
CombineMode_ = plist->get ("schwarz: combine mode", CombineMode_);
gotCombineMode = true;
}
catch (Teuchos::Exceptions::InvalidParameterType&) {}
}
// Try to get the combine mode as a string. If this works, use the
// validator to convert to int. This is painful, but necessary in
// order to do validation, since the input list doesn't come with a
// validator.
if (! gotCombineMode) {
const ParameterEntry& validEntry =
getValidParameters ()->getEntry ("schwarz: combine mode");
RCP<const ParameterEntryValidator> v = validEntry.validator ();
typedef StringToIntegralParameterEntryValidator<CombineMode> vs2e_type;
RCP<const vs2e_type> vs2e = rcp_dynamic_cast<const vs2e_type> (v, true);
const ParameterEntry& inputEntry = plist->getEntry ("schwarz: combine mode");
CombineMode_ = vs2e->getIntegralValue (inputEntry, "schwarz: combine mode");
gotCombineMode = true;
}
(void) gotCombineMode; // forestall "set but not used" compiler warning
OverlapLevel_ = plist->get ("schwarz: overlap level", OverlapLevel_);
// We set IsOverlapping_ in initialize(), once we know that Matrix_ is nonnull.
// Will we be doing reordering? Unlike Ifpack, we'll use a
// "schwarz: reordering list" to give to Zoltan2.
UseReordering_ = plist->get ("schwarz: use reordering", UseReordering_);
#if !defined(HAVE_IFPACK2_XPETRA) || !defined(HAVE_IFPACK2_ZOLTAN2)
TEUCHOS_TEST_FOR_EXCEPTION(
UseReordering_, std::invalid_argument, "Ifpack2::AdditiveSchwarz::"
"setParameters: You specified \"schwarz: use reordering\" = true. "
"This is only valid when Trilinos was built with Ifpack2, Xpetra, and "
"Zoltan2 enabled. Either Xpetra or Zoltan2 was not enabled in your build "
"of Trilinos.");
#endif
// FIXME (mfh 18 Nov 2013) Now would be a good time to validate the
// "schwarz: reordering list" parameter list. Currently, that list
// gets extracted in setup().
// if true, filter singletons. NOTE: the filtered matrix can still have
// singletons! A simple example: upper triangular matrix, if I remove
// the lower node, I still get a matrix with a singleton! However, filter
// singletons should help for PDE problems with Dirichlet BCs.
FilterSingletons_ = plist->get ("schwarz: filter singletons", FilterSingletons_);
// If the inner solver doesn't exist yet, don't create it.
// initialize() creates it.
//
// If the inner solver _does_ exist, there are three cases,
// depending on what the user put in the input ParameterList.
//
// 1. The user did /not/ provide a parameter specifying the inner
// solver's type, nor did the user specify a sublist of
// parameters for the inner solver
// 2. The user did /not/ provide a parameter specifying the inner
// solver's type, but /did/ specify a sublist of parameters for
// the inner solver
// 3. The user provided a parameter specifying the inner solver's
// type (it does not matter in this case whether the user gave
// a sublist of parameters for the inner solver)
//
// AdditiveSchwarz has "delta" (relative) semantics for setting
// parameters. This means that if the user did not specify the
// inner solver's type, we presume that the type has not changed.
// Thus, if the inner solver exists, we don't need to recreate it.
//
// In Case 3, if the user bothered to specify the inner solver's
// type, then we must assume it may differ than the current inner
// solver's type. Thus, we have to recreate the inner solver. We
// achieve this here by assigning null to Inverse_; initialize()
// will recreate the solver when it is needed. Our assumption here
// is necessary because Ifpack2::Preconditioner does not have a
// method for querying a preconditioner's "type" (i.e., name) as a
// string. Remember that the user may have previously set an
// arbitrary inner solver by calling setInnerPreconditioner().
//
// See note at the end of setInnerPreconditioner().
if (! Inverse_.is_null ()) {
// "CUSTOM" explicitly indicates that the user called or plans to
// call setInnerPreconditioner.
if (hasInnerPrecName () && innerPrecName () != "CUSTOM") {
// Wipe out the current inner solver. initialize() will
// recreate it with the correct type.
Inverse_ = Teuchos::null;
}
else {
// Extract and apply the sublist of parameters to give to the
// inner solver, if there is such a sublist of parameters.
std::pair<Teuchos::ParameterList, bool> result = innerPrecParams ();
if (result.second) {
// FIXME (mfh 26 Aug 2015) Rewrite innerPrecParams() so this
// isn't another deep copy.
Inverse_->setParameters (rcp (new ParameterList (result.first)));
}
}
}
NumIterations_ = plist->get<int>("schwarz: num iterations", NumIterations_);
ZeroStartingSolution_ = plist->get<bool>("schwarz: zero starting solution", ZeroStartingSolution_);
}
template<class MatrixType,class LocalInverseType>
Teuchos::RCP<const Teuchos::ParameterList>
AdditiveSchwarz<MatrixType,LocalInverseType>::
getValidParameters () const
{
using Teuchos::ParameterList;
using Teuchos::parameterList;
using Teuchos::RCP;
using Teuchos::rcp_const_cast;
if (validParams_.is_null ()) {
const int overlapLevel = 0;
const bool useReordering = false;
const bool filterSingletons = false;
const int numIterations = 1;
const bool zeroStartingSolution = true;
ParameterList reorderingSublist;
reorderingSublist.set ("order_method", std::string ("rcm"));
RCP<ParameterList> plist = parameterList ("Ifpack2::AdditiveSchwarz");
Tpetra::setCombineModeParameter (*plist, "schwarz: combine mode");
plist->set ("schwarz: overlap level", overlapLevel);
plist->set ("schwarz: use reordering", useReordering);
plist->set ("schwarz: reordering list", reorderingSublist);
// mfh 24 Mar 2015: We accept this for backwards compatibility
// ONLY. It is IGNORED.
plist->set ("schwarz: compute condest", false);
plist->set ("schwarz: filter singletons", filterSingletons);
plist->set ("schwarz: num iterations", numIterations);
plist->set ("schwarz: zero starting solution", zeroStartingSolution);
// FIXME (mfh 18 Nov 2013) Get valid parameters from inner solver.
// JJH The inner solver should handle its own validation.
//
// FIXME (mfh 18 Nov 2013) Get valid parameters from Zoltan2, if
// Zoltan2 was enabled in the build.
// JJH Zoltan2 should handle its own validation.
//
validParams_ = rcp_const_cast<const ParameterList> (plist);
}
return validParams_;
}
template<class MatrixType,class LocalInverseType>
void AdditiveSchwarz<MatrixType,LocalInverseType>::initialize ()
{
using Tpetra::global_size_t;
using Teuchos::RCP;
using Teuchos::rcp;
using Teuchos::SerialComm;
using Teuchos::Time;
using Teuchos::TimeMonitor;
const std::string timerName ("Ifpack2::AdditiveSchwarz::initialize");
RCP<Time> timer = TimeMonitor::lookupCounter (timerName);
if (timer.is_null ()) {
timer = TimeMonitor::getNewCounter (timerName);
}
{ // Start timing here.
TimeMonitor timeMon (*timer);
TEUCHOS_TEST_FOR_EXCEPTION(
Matrix_.is_null (), std::runtime_error, "Ifpack2::AdditiveSchwarz::"
"initialize: The matrix to precondition is null. You must either pass "
"a nonnull matrix to the constructor, or call setMatrix() with a nonnull "
"input, before you may call this method.");
IsInitialized_ = false;
IsComputed_ = false;
RCP<const Teuchos::Comm<int> > comm = Matrix_->getComm ();
RCP<const map_type> rowMap = Matrix_->getRowMap ();
RCP<node_type> node = Matrix_->getNode ();
const global_size_t INVALID =
Teuchos::OrdinalTraits<global_size_t>::invalid ();
// If there's only one process in the matrix's communicator,
// then there's no need to compute overlap.
if (comm->getSize () == 1) {
OverlapLevel_ = 0;
IsOverlapping_ = false;
} else if (OverlapLevel_ != 0) {
IsOverlapping_ = true;
}
if (OverlapLevel_ == 0) {
const global_ordinal_type indexBase = rowMap->getIndexBase ();
RCP<const SerialComm<int> > localComm (new SerialComm<int> ());
// FIXME (mfh 15 Apr 2014) What if indexBase isn't the least
// global index in the list of GIDs on this process?
localMap_ =
rcp (new map_type (INVALID, rowMap->getNodeNumElements (),
indexBase, localComm, node));
}
// compute the overlapping matrix if necessary
if (IsOverlapping_) {
OverlappingMatrix_ = rcp (new OverlappingRowMatrix<row_matrix_type> (Matrix_, OverlapLevel_));
}
setup (); // This does a lot of the initialization work.
if (! Inverse_.is_null ()) {
Inverse_->symbolic (); // Initialize subdomain solver.
}
} // Stop timing here.
IsInitialized_ = true;
++NumInitialize_;
// timer->totalElapsedTime() returns the total time over all timer
// calls. Thus, we use = instead of +=.
InitializeTime_ = timer->totalElapsedTime ();
}
template<class MatrixType,class LocalInverseType>
bool AdditiveSchwarz<MatrixType,LocalInverseType>::isInitialized () const
{
return IsInitialized_;
}
template<class MatrixType,class LocalInverseType>
void AdditiveSchwarz<MatrixType,LocalInverseType>::compute ()
{
using Teuchos::RCP;
using Teuchos::Time;
using Teuchos::TimeMonitor;
if (! IsInitialized_) {
initialize ();
}
TEUCHOS_TEST_FOR_EXCEPTION(
! isInitialized (), std::logic_error, "Ifpack2::AdditiveSchwarz::compute: "
"The preconditioner is not yet initialized, "
"even though initialize() supposedly has been called. "
"This should never happen. "
"Please report this bug to the Ifpack2 developers.");
TEUCHOS_TEST_FOR_EXCEPTION(
Inverse_.is_null (), std::runtime_error,
"Ifpack2::AdditiveSchwarz::compute: The subdomain solver is null. "
"This can only happen if you called setInnerPreconditioner() with a null "
"input, after calling initialize() or compute(). If you choose to call "
"setInnerPreconditioner() with a null input, you must then call it with a "
"nonnull input before you may call initialize() or compute().");
const std::string timerName ("Ifpack2::AdditiveSchwarz::compute");
RCP<Time> timer = TimeMonitor::lookupCounter (timerName);
if (timer.is_null ()) {
timer = TimeMonitor::getNewCounter (timerName);
}
{ // Start timing here.
TimeMonitor timeMon (*timer);
IsComputed_ = false;
Inverse_->numeric ();
} // Stop timing here.
IsComputed_ = true;
++NumCompute_;
// timer->totalElapsedTime() returns the total time over all timer
// calls. Thus, we use = instead of +=.
ComputeTime_ = timer->totalElapsedTime ();
}
//==============================================================================
// Returns true if the preconditioner has been successfully computed, false otherwise.
template<class MatrixType,class LocalInverseType>
bool AdditiveSchwarz<MatrixType,LocalInverseType>::isComputed() const
{
return IsComputed_;
}
template<class MatrixType,class LocalInverseType>
int AdditiveSchwarz<MatrixType,LocalInverseType>::getNumInitialize() const
{
return NumInitialize_;
}
template<class MatrixType,class LocalInverseType>
int AdditiveSchwarz<MatrixType,LocalInverseType>::getNumCompute() const
{
return NumCompute_;
}
template<class MatrixType,class LocalInverseType>
int AdditiveSchwarz<MatrixType,LocalInverseType>::getNumApply() const
{
return NumApply_;
}
template<class MatrixType,class LocalInverseType>
double AdditiveSchwarz<MatrixType,LocalInverseType>::getInitializeTime() const
{
return InitializeTime_;
}
template<class MatrixType,class LocalInverseType>
double AdditiveSchwarz<MatrixType,LocalInverseType>::getComputeTime() const
{
return ComputeTime_;
}
template<class MatrixType,class LocalInverseType>
double AdditiveSchwarz<MatrixType,LocalInverseType>::getApplyTime() const
{
return ApplyTime_;
}
template<class MatrixType,class LocalInverseType>
std::string AdditiveSchwarz<MatrixType,LocalInverseType>::description () const
{
std::ostringstream out;
out << "\"Ifpack2::AdditiveSchwarz\": {";
if (this->getObjectLabel () != "") {
out << "Label: \"" << this->getObjectLabel () << "\", ";
}
out << "Initialized: " << (isInitialized () ? "true" : "false")
<< ", Computed: " << (isComputed () ? "true" : "false")
<< ", Iterations: " << NumIterations_
<< ", Overlap level: " << OverlapLevel_
<< ", Subdomain reordering: \"" << ReorderingAlgorithm_ << "\"";
out << ", Combine mode: \"";
if (CombineMode_ == Tpetra::INSERT) {
out << "INSERT";
} else if (CombineMode_ == Tpetra::ADD) {
out << "ADD";
} else if (CombineMode_ == Tpetra::REPLACE) {
out << "REPLACE";
} else if (CombineMode_ == Tpetra::ABSMAX) {
out << "ABSMAX";
} else if (CombineMode_ == Tpetra::ZERO) {
out << "ZERO";
}
out << "\"";
if (Matrix_.is_null ()) {
out << ", Matrix: null";
}
else {
out << ", Global matrix dimensions: ["
<< Matrix_->getGlobalNumRows () << ", "
<< Matrix_->getGlobalNumCols () << "]";
}
out << ", Inner solver: ";
if (! Inverse_.is_null ()) {
Teuchos::RCP<Teuchos::Describable> inv =
Teuchos::rcp_dynamic_cast<Teuchos::Describable> (Inverse_);
if (! inv.is_null ()) {
out << "{" << inv->description () << "}";
} else {
out << "{" << "Some inner solver" << "}";
}
} else {
out << "null";
}
out << "}";
return out.str ();
}
template<class MatrixType,class LocalInverseType>
void
AdditiveSchwarz<MatrixType,LocalInverseType>::
describe (Teuchos::FancyOStream& out,
const Teuchos::EVerbosityLevel verbLevel) const
{
using Teuchos::OSTab;
using Teuchos::TypeNameTraits;
using std::endl;
const int myRank = Matrix_->getComm ()->getRank ();
const int numProcs = Matrix_->getComm ()->getSize ();
const Teuchos::EVerbosityLevel vl =
(verbLevel == Teuchos::VERB_DEFAULT) ? Teuchos::VERB_LOW : verbLevel;
if (vl > Teuchos::VERB_NONE) {
// describe() starts with a tab, by convention.
OSTab tab0 (out);
if (myRank == 0) {
out << "\"Ifpack2::AdditiveSchwarz\":";
}
OSTab tab1 (out);
if (myRank == 0) {
out << "MatrixType: " << TypeNameTraits<MatrixType>::name () << endl;
out << "LocalInverseType: " << TypeNameTraits<LocalInverseType>::name () << endl;
if (this->getObjectLabel () != "") {
out << "Label: \"" << this->getObjectLabel () << "\"" << endl;
}
out << "Overlap level: " << OverlapLevel_ << endl
<< "Combine mode: \"";
if (CombineMode_ == Tpetra::INSERT) {
out << "INSERT";
} else if (CombineMode_ == Tpetra::ADD) {
out << "ADD";
} else if (CombineMode_ == Tpetra::REPLACE) {
out << "REPLACE";
} else if (CombineMode_ == Tpetra::ABSMAX) {
out << "ABSMAX";
} else if (CombineMode_ == Tpetra::ZERO) {
out << "ZERO";
}
out << "\"" << endl
<< "Subdomain reordering: \"" << ReorderingAlgorithm_ << "\"" << endl;
}
if (Matrix_.is_null ()) {
if (myRank == 0) {
out << "Matrix: null" << endl;
}
}
else {
if (myRank == 0) {
out << "Matrix:" << endl;
std::flush (out);
}
Matrix_->getComm ()->barrier (); // wait for output to finish
Matrix_->describe (out, Teuchos::VERB_LOW);
}
if (myRank == 0) {
out << "Number of initialize calls: " << getNumInitialize () << endl
<< "Number of compute calls: " << getNumCompute () << endl
<< "Number of apply calls: " << getNumApply () << endl
<< "Total time in seconds for initialize: " << getInitializeTime () << endl
<< "Total time in seconds for compute: " << getComputeTime () << endl
<< "Total time in seconds for apply: " << getApplyTime () << endl;
}
if (Inverse_.is_null ()) {
if (myRank == 0) {
out << "Subdomain solver: null" << endl;
}
}
else {
if (vl < Teuchos::VERB_EXTREME) {
if (myRank == 0) {
out << "Subdomain solver: not null" << endl;
}
}
else { // vl >= Teuchos::VERB_EXTREME
for (int p = 0; p < numProcs; ++p) {
if (p == myRank) {
out << "Subdomain solver on Process " << myRank << ":";
if (Inverse_.is_null ()) {
out << "null" << endl;
} else {
Teuchos::RCP<Teuchos::Describable> inv =
Teuchos::rcp_dynamic_cast<Teuchos::Describable> (Inverse_);
if (! inv.is_null ()) {
out << endl;
inv->describe (out, vl);
} else {
out << "null" << endl;
}
}
}
Matrix_->getComm ()->barrier ();
Matrix_->getComm ()->barrier ();
Matrix_->getComm ()->barrier (); // wait for output to finish
}
}
}
Matrix_->getComm ()->barrier (); // wait for output to finish
}
}
template<class MatrixType,class LocalInverseType>
std::ostream& AdditiveSchwarz<MatrixType,LocalInverseType>::print(std::ostream& os) const
{
Teuchos::FancyOStream fos(Teuchos::rcp(&os,false));
fos.setOutputToRootOnly(0);
describe(fos);
return(os);
}
template<class MatrixType,class LocalInverseType>
int AdditiveSchwarz<MatrixType,LocalInverseType>::getOverlapLevel() const
{
return OverlapLevel_;
}
template<class MatrixType,class LocalInverseType>
void AdditiveSchwarz<MatrixType,LocalInverseType>::setup ()
{
#ifdef HAVE_MPI
using Teuchos::MpiComm;
#endif // HAVE_MPI
using Teuchos::ArrayRCP;
using Teuchos::ParameterList;
using Teuchos::RCP;
using Teuchos::rcp;
using Teuchos::rcp_dynamic_cast;
using Teuchos::rcpFromRef;
TEUCHOS_TEST_FOR_EXCEPTION(
Matrix_.is_null (), std::runtime_error, "Ifpack2::AdditiveSchwarz::"
"initialize: The matrix to precondition is null. You must either pass "
"a nonnull matrix to the constructor, or call setMatrix() with a nonnull "
"input, before you may call this method.");
// Localized version of Matrix_ or OverlappingMatrix_.
RCP<row_matrix_type> LocalizedMatrix;
// The "most current local matrix." At the end of this method, this
// will be handed off to the inner solver.
RCP<row_matrix_type> ActiveMatrix;
// Create localized matrix.
if (! OverlappingMatrix_.is_null ()) {
LocalizedMatrix = rcp (new LocalFilter<row_matrix_type> (OverlappingMatrix_));
}
else {
LocalizedMatrix = rcp (new LocalFilter<row_matrix_type> (Matrix_));
}
// Sanity check; I don't trust the logic above to have created LocalizedMatrix.
TEUCHOS_TEST_FOR_EXCEPTION(
LocalizedMatrix.is_null (), std::logic_error,
"Ifpack2::AdditiveSchwarz::setup: LocalizedMatrix is null, after the code "
"that claimed to have created it. This should never be the case. Please "
"report this bug to the Ifpack2 developers.");
// Mark localized matrix as active
ActiveMatrix = LocalizedMatrix;
// Singleton Filtering
if (FilterSingletons_) {
SingletonMatrix_ = rcp (new SingletonFilter<row_matrix_type> (LocalizedMatrix));
ActiveMatrix = SingletonMatrix_;
}
// Do reordering
if (UseReordering_) {
#if defined(HAVE_IFPACK2_XPETRA) && defined(HAVE_IFPACK2_ZOLTAN2)
// Unlike Ifpack, Zoltan2 does all the dirty work here.
typedef ReorderFilter<row_matrix_type> reorder_filter_type;
Teuchos::ParameterList zlist = List_.sublist ("schwarz: reordering list");
ReorderingAlgorithm_ = zlist.get<std::string> ("order_method", "rcm");
ArrayRCP<local_ordinal_type> perm;
ArrayRCP<local_ordinal_type> revperm;
if(ReorderingAlgorithm_ == "user") {
// User-provided reordering
perm = zlist.get<Teuchos::ArrayRCP<local_ordinal_type> >("user ordering");
revperm = zlist.get<Teuchos::ArrayRCP<local_ordinal_type> >("user reverse ordering");
}
else {
// Zoltan2 reordering
typedef Tpetra::RowGraph
<local_ordinal_type, global_ordinal_type, node_type> row_graph_type;
typedef Zoltan2::TpetraRowGraphAdapter<row_graph_type> z2_adapter_type;
RCP<const row_graph_type> constActiveGraph =
Teuchos::rcp_const_cast<const row_graph_type>(ActiveMatrix->getGraph());
z2_adapter_type Zoltan2Graph (constActiveGraph);
typedef Zoltan2::OrderingProblem<z2_adapter_type> ordering_problem_type;
#ifdef HAVE_MPI
// Grab the MPI Communicator and build the ordering problem with that
MPI_Comm myRawComm;
RCP<const MpiComm<int> > mpicomm =
rcp_dynamic_cast<const MpiComm<int> > (ActiveMatrix->getComm ());
if (mpicomm == Teuchos::null) {
myRawComm = MPI_COMM_SELF;
} else {
myRawComm = * (mpicomm->getRawMpiComm ());
}
ordering_problem_type MyOrderingProblem (&Zoltan2Graph, &zlist, myRawComm);
#else
ordering_problem_type MyOrderingProblem (&Zoltan2Graph, &zlist);
#endif
MyOrderingProblem.solve ();
{
typedef Zoltan2::LocalOrderingSolution<local_ordinal_type>
ordering_solution_type;
ordering_solution_type sol (*MyOrderingProblem.getLocalOrderingSolution());
// perm[i] gives the where OLD index i shows up in the NEW
// ordering. revperm[i] gives the where NEW index i shows
// up in the OLD ordering. Note that perm is actually the
// "inverse permutation," in Zoltan2 terms.
perm = sol.getPermutationRCPConst (true);
revperm = sol.getPermutationRCPConst ();
}
}
// All reorderings here...
ReorderedLocalizedMatrix_ = rcp (new reorder_filter_type (ActiveMatrix, perm, revperm));
ActiveMatrix = ReorderedLocalizedMatrix_;
#else
// This is a logic_error, not a runtime_error, because
// setParameters() should have excluded this case already.
TEUCHOS_TEST_FOR_EXCEPTION(
true, std::logic_error, "Ifpack2::AdditiveSchwarz::setup: "
"The Zoltan2 and Xpetra packages must be enabled in order "
"to support reordering.");
#endif
}
innerMatrix_ = ActiveMatrix;
TEUCHOS_TEST_FOR_EXCEPTION(
innerMatrix_.is_null (), std::logic_error, "Ifpack2::AdditiveSchwarz::"
"setup: Inner matrix is null right before constructing inner solver. "
"Please report this bug to the Ifpack2 developers.");
// Construct the inner solver if necessary.
if (Inverse_.is_null ()) {
const std::string innerName = innerPrecName ();
TEUCHOS_TEST_FOR_EXCEPTION(
innerName == "INVALID", std::logic_error,
"Ifpack2::AdditiveSchwarz::initialize: AdditiveSchwarz doesn't "
"know how to create an instance of your LocalInverseType \""
<< Teuchos::TypeNameTraits<LocalInverseType>::name () << "\". "
"Please talk to the Ifpack2 developers for details.");
TEUCHOS_TEST_FOR_EXCEPTION(
innerName == "CUSTOM", std::runtime_error, "Ifpack2::AdditiveSchwarz::"
"initialize: If the \"inner preconditioner name\" parameter (or any "
"alias thereof) has the value \"CUSTOM\", then you must first call "
"setInnerPreconditioner with a nonnull inner preconditioner input before "
"you may call initialize().");
// FIXME (mfh 26 Aug 2015) Once we fix Bug 6392, the following
// three lines of code can and SHOULD go away.
if (! Trilinos::Details::Impl::registeredSomeLinearSolverFactory ("Ifpack2")) {
Ifpack2::Details::registerLinearSolverFactory ();
}
// FIXME (mfh 26 Aug 2015) Provide the capability to get inner
// solvers from packages other than Ifpack2.
typedef typename MV::mag_type MT;
RCP<inner_solver_type> innerPrec =
Trilinos::Details::getLinearSolver<MV, OP, MT> ("Ifpack2", innerName);
TEUCHOS_TEST_FOR_EXCEPTION(
innerPrec.is_null (), std::logic_error,
"Ifpack2::AdditiveSchwarz::setup: Failed to create inner preconditioner "
"with name \"" << innerName << "\".");
innerPrec->setMatrix (innerMatrix_);
// Extract and apply the sublist of parameters to give to the
// inner solver, if there is such a sublist of parameters.
std::pair<Teuchos::ParameterList, bool> result = innerPrecParams ();
if (result.second) {
// FIXME (mfh 26 Aug 2015) We don't really want to use yet
// another deep copy of the ParameterList here.
innerPrec->setParameters (rcp (new ParameterList (result.first)));
}
Inverse_ = innerPrec; // "Commit" the inner solver.
}
else if (Inverse_->getMatrix ().getRawPtr () != innerMatrix_.getRawPtr ()) {
// The new inner matrix is different from the inner
// preconditioner's current matrix, so give the inner
// preconditioner the new inner matrix.
Inverse_->setMatrix (innerMatrix_);
}
TEUCHOS_TEST_FOR_EXCEPTION(
Inverse_.is_null (), std::logic_error, "Ifpack2::AdditiveSchwarz::"
"setup: Inverse_ is null right after we were supposed to have created it."
" Please report this bug to the Ifpack2 developers.");
// We don't have to call setInnerPreconditioner() here, because we
// had the inner matrix (innerMatrix_) before creation of the inner
// preconditioner. Calling setInnerPreconditioner here would be
// legal, but it would require an unnecessary reset of the inner
// preconditioner (i.e., calling initialize() and compute() again).
}
template<class MatrixType, class LocalInverseType>
void AdditiveSchwarz<MatrixType, LocalInverseType>::
setInnerPreconditioner (const Teuchos::RCP<Preconditioner<scalar_type,
local_ordinal_type,
global_ordinal_type,
node_type> >& innerPrec)
{
if (! innerPrec.is_null ()) {
// Make sure that the new inner solver knows how to have its matrix changed.
typedef Details::CanChangeMatrix<row_matrix_type> can_change_type;
can_change_type* innerSolver = dynamic_cast<can_change_type*> (&*innerPrec);
TEUCHOS_TEST_FOR_EXCEPTION(
innerSolver == NULL, std::invalid_argument, "Ifpack2::AdditiveSchwarz::"
"setInnerPreconditioner: The input preconditioner does not implement the "
"setMatrix() feature. Only input preconditioners that inherit from "
"Ifpack2::Details::CanChangeMatrix implement this feature.");
// If users provide an inner solver, we assume that
// AdditiveSchwarz's current inner solver parameters no longer
// apply. (In fact, we will remove those parameters from
// AdditiveSchwarz's current list below.) Thus, we do /not/ apply
// the current sublist of inner solver parameters to the input
// inner solver.
// mfh 03 Jan 2014: Thanks to Paul Tsuji for pointing out that
// it's perfectly legal for innerMatrix_ to be null here. This
// can happen if initialize() has not been called yet. For
// example, when Ifpack2::Factory creates an AdditiveSchwarz
// instance, it calls setInnerPreconditioner() without first
// calling initialize().
// Give the local matrix to the new inner solver.
innerSolver->setMatrix (innerMatrix_);
// If the user previously specified a parameter for the inner
// preconditioner's type, then clear out that parameter and its
// associated sublist. Replace the inner preconditioner's type with
// "CUSTOM", to make it obvious that AdditiveSchwarz's ParameterList
// does not necessarily describe the current inner preconditioner.
// We have to remove all allowed aliases of "inner preconditioner
// name" before we may set it to "CUSTOM". Users may also set this
// parameter to "CUSTOM" themselves, but this is not required.
removeInnerPrecName ();
removeInnerPrecParams ();
List_.set ("inner preconditioner name", "CUSTOM");
// Bring the new inner solver's current status (initialized or
// computed) in line with AdditiveSchwarz's current status.
if (isInitialized ()) {
innerPrec->initialize ();
}
if (isComputed ()) {
innerPrec->compute ();
}
}
// If the new inner solver is null, we don't change the initialized
// or computed status of AdditiveSchwarz. That way, AdditiveSchwarz
// won't have to recompute innerMatrix_ if the inner solver changes.
// This does introduce a new error condition in compute() and
// apply(), but that's OK.
// Set the new inner solver.
typedef Ifpack2::Details::LinearSolver<scalar_type, local_ordinal_type,
global_ordinal_type, node_type> inner_solver_impl_type;
Inverse_ = Teuchos::rcp (new inner_solver_impl_type (innerPrec, "CUSTOM"));
}
template<class MatrixType, class LocalInverseType>
void AdditiveSchwarz<MatrixType, LocalInverseType>::
setMatrix (const Teuchos::RCP<const row_matrix_type>& A)
{
// Don't set the matrix unless it is different from the current one.
if (A.getRawPtr () != Matrix_.getRawPtr ()) {
IsInitialized_ = false;
IsComputed_ = false;
// Reset all the state computed in initialize() and compute().
OverlappingMatrix_ = Teuchos::null;
ReorderedLocalizedMatrix_ = Teuchos::null;
innerMatrix_ = Teuchos::null;
SingletonMatrix_ = Teuchos::null;
localMap_ = Teuchos::null;
DistributedImporter_ = Teuchos::null;
Matrix_ = A;
}
}
} // namespace Ifpack2
// NOTE (mfh 26 Aug 2015) There's no need to instantiate for CrsMatrix
// too. All Ifpack2 preconditioners can and should do dynamic casts
// internally, if they need a type more specific than RowMatrix.
#define IFPACK2_ADDITIVESCHWARZ_INSTANT(S,LO,GO,N) \
template class Ifpack2::AdditiveSchwarz< Tpetra::RowMatrix<S, LO, GO, N> >;
#endif // IFPACK2_ADDITIVESCHWARZ_DECL_HPP
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