This file is indexed.

/usr/lib/python2.7/dist-packages/pyFAI/test/utilstest.py is in python-pyfai 0.15.0+dfsg1-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
# coding: utf-8
#
#    Copyright (C) 2012-2018 European Synchrotron Radiation Facility, Grenoble, France
#
#    Principal author:       Jérôme Kieffer (Jerome.Kieffer@ESRF.eu)
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
# copies of the Software, and to permit persons to whom the Software is
# furnished to do so, subject to the following conditions:
#
# The above copyright notice and this permission notice shall be included in
# all copies or substantial portions of the Software.
#
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
# THE SOFTWARE.
#
"bunch of utility function/static classes to handle testing environment"
from __future__ import print_function, division, absolute_import, with_statement

__author__ = "Jérôme Kieffer"
__contact__ = "jerome.kieffer@esrf.eu"
__license__ = "MIT"
__copyright__ = "European Synchrotron Radiation Facility, Grenoble, France"
__date__ = "24/01/2018"

PACKAGE = "pyFAI"
DATA_KEY = "PYFAI_DATA"

import os
import sys
import threading
import unittest
import logging
import shutil
import contextlib
import tempfile
import getpass
import functools


from pyFAI.third_party.argparse import ArgumentParser
from ..third_party import six
from silx.resources import ExternalResources

logger = logging.getLogger(__name__)

TEST_HOME = os.path.dirname(os.path.abspath(__file__))


def copy(infile, outfile):
    "link or copy file according to the OS"
    if "link" in dir(os):
        os.link(infile, outfile)
    else:
        shutil.copy(infile, outfile)


class TestContext(object):
    """
    Class providing useful stuff for preparing tests.
    """
    def __init__(self):
        self.options = None
        self.timeout = 60  # timeout in seconds for downloading images
        # url_base = "http://forge.epn-campus.eu/attachments/download"
        self.url_base = "http://ftp.edna-site.org/pyFAI/testimages"
        self.resources = ExternalResources(PACKAGE,
                                           timeout=self.timeout,
                                           env_key=DATA_KEY,
                                           url_base=self.url_base)
        self.sem = threading.Semaphore()
        self.recompiled = False
        self.reloaded = False
        self.name = PACKAGE
        self.script_dir = None
        self.installed = False

        self.download_images = self.resources.download_all
        self.getimage = self.resources.getfile
        self.low_mem = bool(os.environ.get("PYFAI_LOW_MEM"))
        self.opencl = bool(os.environ.get("PYFAI_OPENCL", True))

        self._tempdir = None

    def deep_reload(self):
        self.pyFAI = __import__(self.name)
        logger.info("%s loaded from %s", self.name, self.pyFAI.__file__)
        sys.modules[self.name] = self.pyFAI
        self.reloaded = True
        import pyFAI.utils.decorators
        pyFAI.utils.decorators.depreclog.setLevel(logging.ERROR)
        return self.pyFAI

    def forceBuild(self, remove_first=True):
        """
        Force the recompilation of pyFAI

        Nonesense, kept for legacy reasons
        """
        return

    def get_options(self):
        """
        Parse the command line to analyse options ... returns options
        """
        if self.options is None:
            parser = ArgumentParser(usage="Tests for %s" % self.name)
            parser.add_argument("-d", "--debug", dest="debug", help="run in debugging mode",
                                default=False, action="store_true")
            parser.add_argument("-i", "--info", dest="info", help="run in more verbose mode ",
                                default=False, action="store_true")
            parser.add_argument("-f", "--force", dest="force", help="force the build of the library",
                                default=False, action="store_true")
            parser.add_argument("-r", "--really-force", dest="remove",
                                help="remove existing build and force the build of the library",
                                default=False, action="store_true")
            parser.add_argument(dest="args", type=str, nargs='*')
            self.options = parser.parse_args([])
        return self.options

    def get_test_env(self):
        """
        Returns an associated environment with a working project.
        """
        env = dict((str(k), str(v)) for k, v in os.environ.items())
        env["PYTHONPATH"] = os.pathsep.join(sys.path)
        return env

    def script_path(self, script_name, module_name):
        """Returns the script path according to it's location"""
        if self.installed:
            script = self.get_installed_script_path(script_name)
        else:
            import importlib
            module = importlib.import_module(module_name)
            script = module.__file__
        return script

    def get_installed_script_path(self, script):
        """
        Returns the path of the executable and the associated environment

        In Windows, it checks availability of script using .py .bat, and .exe
        file extensions.
        """
        if (sys.platform == "win32"):
            available_extensions = [".py", ".bat", ".exe"]
        else:
            available_extensions = [""]

        paths = os.environ.get("PATH", "").split(os.pathsep)
        for base in paths:
            # clean up extra quotes from paths
            if base.startswith('"') and base.endswith('"'):
                base = base[1:-1]
            for file_extension in available_extensions:
                script_path = os.path.join(base, script + file_extension)
                print(script_path)
                if os.path.exists(script_path):
                    # script found
                    return script_path
        # script not found
        logger.warning("Script '%s' not found in paths: %s", script, ":".join(paths))
        script_path = script
        return script_path

    def _initialize_tmpdir(self):
        """Initialize the temporary directory"""
        if not self._tempdir:
            with self.sem:
                if not self._tempdir:
                    self._tempdir = tempfile.mkdtemp("_" + getpass.getuser(),
                                                     self.name + "_")

    @property
    def tempdir(self):
        if not self._tempdir:
            self._initialize_tmpdir()
        return self._tempdir

    def clean_up(self):
        """Removes the temporary directory (and all its content !)"""
        with self.sem:
            if not self._tempdir:
                return
            if not os.path.isdir(self._tempdir):
                return
            for root, dirs, files in os.walk(self._tempdir, topdown=False):
                for name in files:
                    os.remove(os.path.join(root, name))
                for name in dirs:
                    os.rmdir(os.path.join(root, name))
            os.rmdir(self._tempdir)
            self._tempdir = None


UtilsTest = TestContext()
"""Singleton containing util context of whole the tests"""


def diff_img(ref, obt, comment=""):
    """
    Highlight the difference in images
    """
    assert ref.shape == obt.shape
    delta = abs(obt - ref)
    if delta.max() > 0:
        from ..gui.matplotlib import pyplot
        fig = pyplot.figure()
        ax1 = fig.add_subplot(2, 2, 1)
        ax2 = fig.add_subplot(2, 2, 2)
        ax3 = fig.add_subplot(2, 2, 3)
        im_ref = ax1.imshow(ref)
        pyplot.colorbar(im_ref)
        ax1.set_title("%s ref" % comment)
        im_obt = ax2.imshow(obt)
        pyplot.colorbar(im_obt)
        ax2.set_title("%s obt" % comment)
        im_delta = ax3.imshow(delta)
        pyplot.colorbar(im_delta)
        ax3.set_title("delta")
        imax = delta.argmax()
        x = imax % ref.shape[-1]
        y = imax // ref.shape[-1]
        ax3.plot([x], [y], "o", scalex=False, scaley=False)
        fig.show()
        six.moves.input()


def diff_crv(ref, obt, comment=""):
    """
    Highlight the difference in vectors
    """
    assert ref.shape == obt.shape
    delta = abs(obt - ref)
    if delta.max() > 0:
        from ..gui.matplotlib import pyplot
        fig = pyplot.figure()
        ax1 = fig.add_subplot(1, 2, 1)
        ax2 = fig.add_subplot(1, 2, 2)
        _im_ref = ax1.plot(ref, label="%s ref" % comment)
        _im_obt = ax1.plot(obt, label="%s obt" % comment)
        _im_delta = ax2.plot(delta, label="delta")
        fig.show()
        six.moves.input()


if sys.hexversion >= 0x030400F0:  # Python >= 3.4
    class ParametricTestCase(unittest.TestCase):
        pass

else:
    class ParametricTestCase(unittest.TestCase):
        """TestCase with subTest support for Python < 3.4.

        Add subTest method to support parametric tests.
        API is the same, but behavior differs:
        If a subTest fails, the following ones are not run.
        """

        _subtest_msg = None  # Class attribute to provide a default value

        @contextlib.contextmanager
        def subTest(self, msg=None, **params):
            """Use as unittest.TestCase.subTest method in Python >= 3.4."""
            # Format arguments as: '[msg] (key=value, ...)'
            param_str = ', '.join(['%s=%s' % (k, v) for k, v in params.items()])
            self._subtest_msg = '[%s] (%s)' % (msg or '', param_str)
            yield
            self._subtest_msg = None

        def shortDescription(self):
            short_desc = super(ParametricTestCase, self).shortDescription()
            if self._subtest_msg is not None:
                # Append subTest message to shortDescription
                short_desc = ' '.join(
                    [msg for msg in (short_desc, self._subtest_msg) if msg])

            return short_desc if short_desc else None


# Test logging messages #######################################################

class TestLogging(logging.Handler):
    """Context checking the number of logging messages from a specified Logger.

    It disables propagation of logging message while running.

    This is meant to be used as a with statement, for example:

    >>> with TestLogging(logger, error=2, warning=0):
    >>>     pass  # Run tests here expecting 2 ERROR and no WARNING from logger
    ...

    :param logger: Name or instance of the logger to test.
                   (Default: root logger)
    :type logger: str or :class:`logging.Logger`
    :param int critical: Expected number of CRITICAL messages.
                         Default: Do not check.
    :param int error: Expected number of ERROR messages.
                      Default: Do not check.
    :param int warning: Expected number of WARNING messages.
                        Default: Do not check.
    :param int info: Expected number of INFO messages.
                     Default: Do not check.
    :param int debug: Expected number of DEBUG messages.
                      Default: Do not check.
    :param int notset: Expected number of NOTSET messages.
                       Default: Do not check.
    :raises RuntimeError: If the message counts are the expected ones.
    """

    def __init__(self, logger=None, critical=None, error=None,
                 warning=None, info=None, debug=None, notset=None):
        if logger is None:
            logger = logging.getLogger()
        elif not isinstance(logger, logging.Logger):
            logger = logging.getLogger(logger)
        self.logger = logger

        self.records = []

        self.count_by_level = {
            logging.CRITICAL: critical,
            logging.ERROR: error,
            logging.WARNING: warning,
            logging.INFO: info,
            logging.DEBUG: debug,
            logging.NOTSET: notset
        }

        super(TestLogging, self).__init__()

    def __enter__(self):
        """Context (i.e., with) support"""
        self.records = []  # Reset recorded LogRecords
        self.logger.addHandler(self)
        self.logger.propagate = False
        # ensure no log message is ignored
        self.entry_level = self.logger.level * 1
        self.logger.setLevel(logging.DEBUG)

    def __exit__(self, exc_type, exc_value, traceback):
        """Context (i.e., with) support"""
        self.logger.removeHandler(self)
        self.logger.propagate = True
        self.logger.setLevel(self.entry_level)

        for level, expected_count in self.count_by_level.items():
            if expected_count is None:
                continue

            # Number of records for the specified level_str
            count = len([r for r in self.records if r.levelno == level])
            if count != expected_count:  # That's an error
                # Resend record logs through logger as they where masked
                # to help debug
                for record in self.records:
                    self.logger.handle(record)
                raise RuntimeError(
                    'Expected %d %s logging messages, got %d' % (
                        expected_count, logging.getLevelName(level), count))

    def emit(self, record):
        """Override :meth:`logging.Handler.emit`"""
        self.records.append(record)


def test_logging(logger=None, critical=None, error=None,
                 warning=None, info=None, debug=None, notset=None):
    """Decorator checking number of logging messages.

    Propagation of logging messages is disabled by this decorator.

    In case the expected number of logging messages is not found, it raises
    a RuntimeError.

    >>> class Test(unittest.TestCase):
    ...     @test_logging('module_logger_name', error=2, warning=0)
    ...     def test(self):
    ...         pass  # Test expecting 2 ERROR and 0 WARNING messages

    :param logger: Name or instance of the logger to test.
                   (Default: root logger)
    :type logger: str or :class:`logging.Logger`
    :param int critical: Expected number of CRITICAL messages.
                         Default: Do not check.
    :param int error: Expected number of ERROR messages.
                      Default: Do not check.
    :param int warning: Expected number of WARNING messages.
                        Default: Do not check.
    :param int info: Expected number of INFO messages.
                     Default: Do not check.
    :param int debug: Expected number of DEBUG messages.
                      Default: Do not check.
    :param int notset: Expected number of NOTSET messages.
                       Default: Do not check.
    """
    def decorator(func):
        test_context = TestLogging(logger, critical, error,
                                   warning, info, debug, notset)

        @functools.wraps(func)
        def wrapper(*args, **kwargs):
            with test_context:
                result = func(*args, **kwargs)
            return result
        return wrapper
    return decorator