This file is indexed.

/usr/lib/python3/dist-packages/ngs/ReadGroupIterator.py is in python3-ngs 1.3.0-3.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

 1
 2
 3
 4
 5
 6
 7
 8
 9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
# ===========================================================================
# 
#                            PUBLIC DOMAIN NOTICE
#               National Center for Biotechnology Information
# 
#  This software/database is a "United States Government Work" under the
#  terms of the United States Copyright Act.  It was written as part of
#  the author's official duties as a United States Government employee and
#  thus cannot be copyrighted.  This software/database is freely available
#  to the public for use. The National Library of Medicine and the U.S.
#  Government have not placed any restriction on its use or reproduction.
# 
#  Although all reasonable efforts have been taken to ensure the accuracy
#  and reliability of the software and data, the NLM and the U.S.
#  Government do not and cannot warrant the performance or results that
#  may be obtained by using this software or data. The NLM and the U.S.
#  Government disclaim all warranties, express or implied, including
#  warranties of performance, merchantability or fitness for any particular
#  purpose.
# 
#  Please cite the author in any work or product based on this material.
# 
# ===========================================================================
# 
# 

from ctypes import c_int
from . import NGS
from .String import getNGSValue
from .ReadGroup import ReadGroup

# Iterates across a list of ReadGroups

class ReadGroupIterator(ReadGroup):
    def nextReadGroup(self):
        """Advance to first ReadGroup on initial invocation 
        Advance to next ReadGroup subsequently
        :returns: false if no more ReadGroups are available.
        :throws: ErrorMsg if more ReadGroups should be available, but could not be accessed.
        """
        return bool(getNGSValue(self, NGS.lib_manager.PY_NGS_ReadGroupIteratorNext, c_int))