/usr/lib/R/site-library/genefilter/INDEX is in r-bioc-genefilter 1.60.0-1.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 | Anova A filter function for Analysis of Variance
coxfilter A filter function for univariate Cox
regression.
cv A filter function for the coefficient of
variation.
dist2 Calculate an n-by-n matrix by applying a
function to all pairs of columns of an m-by-n
matrix.
eSetFilter A function to filter an eSet object
filter_volcano Volcano plot for overall variance filtering
filtered_p Compute and adjust p-values, with filtering
filterfun Creates a first FALSE exiting function from the
list of filter functions it is given.
findLargest Find the Entrez Gene ID corresponding to the
largest statistic
gapFilter A filter to select genes based on there being a
gap.
genefilter A function to filter genes.
genefinder Finds genes that have similar patterns of
expression.
genescale Scales a matrix or vector.
half.range.mode Mode estimation for continuous data
kOverA A filter function for k elements larger than A.
kappa_p Compute proportionality constant for fold
change bound.
maxA A filter function to filter according to the
maximum.
nsFilter Filtering of Features in an ExpressionSet
pOverA A filter function to filter according to the
proportion of elements larger than A.
rejection_plot Plot rejections vs. p-value cutoff
rowFtests t-tests and F-tests for rows or columns of a
matrix
rowROC-class Class "rowROC"
rowSds Row variance and standard deviation of a
numeric array
rowpAUCs-methods Rowwise ROC and pAUC computation
shorth A location estimator based on the shorth
tdata A small test dataset of Affymetrix Expression
data.
ttest A filter function for a t.test
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