This file is indexed.

/usr/lib/R/site-library/genefilter/help/AnIndex is in r-bioc-genefilter 1.60.0-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

 1
 2
 3
 4
 5
 6
 7
 8
 9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
Anova	Anova
area	rowROC-class
area,rowROC-method	rowROC-class
AUC	rowROC-class
AUC,rowROC-method	rowROC-class
colFtests	rowFtests
colFtests,ExpressionSet,character-method	rowFtests
colFtests,ExpressionSet,factor-method	rowFtests
colFtests,matrix,factor-method	rowFtests
colttests	rowFtests
colttests,ExpressionSet,character-method	rowFtests
colttests,ExpressionSet,factor-method	rowFtests
colttests,ExpressionSet,missing-method	rowFtests
colttests,matrix,factor-method	rowFtests
colttests,matrix,missing-method	rowFtests
coxfilter	coxfilter
cv	cv
dist2	dist2
eSetFilter	eSetFilter
fastT	rowFtests
featureFilter	nsFilter
filtered_p	filtered_p
filtered_R	filtered_p
filterfun	filterfun
filter_volcano	filter_volcano
findLargest	findLargest
gapFilter	gapFilter
genefilter	genefilter
genefinder	genefinder
genefinder,ExpressionSet,vector-method	genefinder
genefinder,matrix,vector-method	genefinder
genescale	genescale
getFilterNames	eSetFilter
getFuncDesc	eSetFilter
getRdAsText	eSetFilter
half.range.mode	half.range.mode
isESet	eSetFilter
kappa_p	kappa_p
kappa_t	kappa_p
kOverA	kOverA
maxA	maxA
nsFilter	nsFilter
nsFilter,ExpressionSet-method	nsFilter
parseArgs	eSetFilter
parseDesc	eSetFilter
pAUC	rowROC-class
pAUC,rowROC,numeric-method	rowROC-class
plot,rowROC,missing-method	rowROC-class
pOverA	pOverA
rejection_plot	rejection_plot
rowFtests	rowFtests
rowFtests,ExpressionSet,character-method	rowFtests
rowFtests,ExpressionSet,factor-method	rowFtests
rowFtests,matrix,factor-method	rowFtests
rowpAUCs	rowpAUCs
rowpAUCs,ExpressionSet,ANY-method	rowpAUCs
rowpAUCs,ExpressionSet,character-method	rowpAUCs
rowpAUCs,matrix,factor-method	rowpAUCs
rowpAUCs,matrix,numeric-method	rowpAUCs
rowpAUCs-methods	rowpAUCs
rowROC	rowROC-class
rowROC-class	rowROC-class
rowSds	rowSds
rowttests	rowFtests
rowttests,ExpressionSet,character-method	rowFtests
rowttests,ExpressionSet,factor-method	rowFtests
rowttests,ExpressionSet,missing-method	rowFtests
rowttests,matrix,factor-method	rowFtests
rowttests,matrix,missing-method	rowFtests
rowVars	rowSds
sens	rowROC-class
sens,rowROC-method	rowROC-class
setESetArgs	eSetFilter
shorth	shorth
show,rowROC-method	rowROC-class
showESet	eSetFilter
spec	rowROC-class
spec,rowROC-method	rowROC-class
tdata	tdata
ttest	ttest
varFilter	nsFilter
[,rowROC-method	rowROC-class