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$<-,CompressedList-method CompressedList-class
$<-,RangedData-method RangedData-class
%outside% findOverlaps-methods
%over% findOverlaps-methods
%within% findOverlaps-methods
active MaskCollection-class
active,MaskCollection-method MaskCollection-class
active<- MaskCollection-class
active<-,MaskCollection-method MaskCollection-class
all,CompressedAtomicList-method AtomicList-utils
all,CompressedRleList-method AtomicList-utils
any,CompressedAtomicList-method AtomicList-utils
anyNA,CompressedAtomicList-method AtomicList-utils
append,MaskCollection,MaskCollection-method MaskCollection-class
as.character,Ranges-method Ranges-class
as.data.frame,Hits-method Hits-class-leftovers
as.data.frame,IPos-method IPos-class
as.data.frame,RangedData-method RangedData-class
as.data.frame,Ranges-method Ranges-class
as.env,RangedData-method RangedData-class
as.env,SDFLWrapperForTransform-method DataFrameList-class
as.factor,Ranges-method Ranges-class
as.integer,Ranges-method Ranges-class
as.list,CompressedAtomicList-method AtomicList-class
as.list,CompressedNormalIRangesList-method IRangesList-class
as.list,Hits-method Hits-class-leftovers
as.list,SortedByQueryHits-method Hits-class-leftovers
as.matrix,AtomicList-method AtomicList-class
as.matrix,CompressedHitsList-method CompressedHitsList-class
as.matrix,Ranges-method Ranges-class
as.matrix,Views-method Views-class
as.matrix,ViewsList-method ViewsList-class
as.vector,AtomicList-method AtomicList-class
asNormalIRanges IRanges-utils
AtomicList AtomicList-class
AtomicList-class AtomicList-class
AtomicList-utils AtomicList-utils
breakInChunks IRanges-utils
c,CompressedList-method CompressedList-class
c,IPos-method IPos-class
c,IRanges-method IRanges-class
c,RangedData-method RangedData-class
c,Views-method Views-class
cbind,DataFrameList-method DataFrameList-class
CharacterList AtomicList-class
CharacterList-class AtomicList-class
chartr,ANY,ANY,CompressedCharacterList-method AtomicList-utils
chartr,ANY,ANY,CompressedRleList-method AtomicList-utils
chartr,ANY,ANY,SimpleCharacterList-method AtomicList-utils
chartr,ANY,ANY,SimpleRleList-method AtomicList-utils
class:AtomicList AtomicList-class
class:CharacterList AtomicList-class
class:ComplexList AtomicList-class
class:CompressedAtomicList AtomicList-class
class:CompressedCharacterList AtomicList-class
class:CompressedComplexList AtomicList-class
class:CompressedFactorList AtomicList-class
class:CompressedGrouping Grouping-class
class:CompressedHitsList CompressedHitsList-class
class:CompressedIntegerList AtomicList-class
class:CompressedIRangesList IRangesList-class
class:CompressedList CompressedList-class
class:CompressedLogicalList AtomicList-class
class:CompressedManyToManyGrouping Grouping-class
class:CompressedManyToOneGrouping Grouping-class
class:CompressedNormalIRangesList IRangesList-class
class:CompressedNumericList AtomicList-class
class:CompressedRawList AtomicList-class
class:CompressedRleList AtomicList-class
class:Dups Grouping-class
class:FactorList AtomicList-class
class:Grouping Grouping-class
class:GroupingIRanges Grouping-class
class:GroupingRanges Grouping-class
class:H2LGrouping Grouping-class
class:IntegerList AtomicList-class
class:IPos IPos-class
class:IRanges IRanges-class
class:IRangesList IRangesList-class
class:LogicalList AtomicList-class
class:ManyToManyGrouping Grouping-class
class:ManyToOneGrouping Grouping-class
class:MaskCollection MaskCollection-class
class:NCList NCList-class
class:NCLists NCList-class
class:NormalIRanges IRanges-class
class:NormalIRangesList IRangesList-class
class:NumericList AtomicList-class
class:Partitioning Grouping-class
class:PartitioningByEnd Grouping-class
class:PartitioningByWidth Grouping-class
class:PartitioningMap Grouping-class
class:RangedData RangedData-class
class:Ranges Ranges-class
class:RangesList-class RangesList-class
class:RangesORmissing nearest-methods
class:RawList AtomicList-class
class:RleList AtomicList-class
class:RleViews RleViews-class
class:SimpleAtomicList AtomicList-class
class:SimpleCharacterList AtomicList-class
class:SimpleComplexList AtomicList-class
class:SimpleFactorList AtomicList-class
class:SimpleGrouping Grouping-class
class:SimpleIntegerList AtomicList-class
class:SimpleIRangesList IRangesList-class
class:SimpleLogicalList AtomicList-class
class:SimpleManyToManyGrouping Grouping-class
class:SimpleManyToOneGrouping Grouping-class
class:SimpleNormalIRangesList IRangesList-class
class:SimpleNumericList AtomicList-class
class:SimpleRangesList-class RangesList-class
class:SimpleRawList AtomicList-class
class:SimpleRleList AtomicList-class
class:SimpleViewsList ViewsList-class
class:Views Views-class
class:ViewsList ViewsList-class
classNameForDisplay,CompressedList-method CompressedList-class
coerce,ANY,CompressedList-method CompressedList-class
coerce,ANY,CompressedSplitDataFrameList-method DataFrameList-class
coerce,ANY,IPos-method IPos-class
coerce,ANY,Ranges-method IRanges-class
coerce,ANY,SimpleSplitDataFrameList-method DataFrameList-class
coerce,ANY,SplitDataFrameList-method DataFrameList-class
coerce,ANY,vector-method IRanges-internals
coerce,AtomicList,CharacterList-method AtomicList-class
coerce,AtomicList,ComplexList-method AtomicList-class
coerce,AtomicList,IntegerList-method AtomicList-class
coerce,AtomicList,LogicalList-method AtomicList-class
coerce,AtomicList,NumericList-method AtomicList-class
coerce,AtomicList,RawList-method AtomicList-class
coerce,AtomicList,RleList-method AtomicList-class
coerce,AtomicList,RleViews AtomicList-class
coerce,character,IRanges-method IRanges-class
coerce,CompressedAtomicList,list-method AtomicList-class
coerce,CompressedIRangesList,CompressedNormalIRangesList-method IRangesList-class
coerce,CompressedRleList,CompressedIRangesList-method IRangesList-class
coerce,data.frame,RangedData-method RangedData-class
coerce,DataFrame,Grouping-method Grouping-class
coerce,DataFrame,SplitDataFrameList-method DataFrameList-class
coerce,DataFrameList,DataFrame-method DataFrameList-class
coerce,DataTable,RangedData-method RangedData-class
coerce,factor,IRanges-method IRanges-class
coerce,FactorList,Grouping-method Grouping-class
coerce,grouping,Grouping-method Grouping-class
coerce,grouping,ManyToOneGrouping-method Grouping-class
coerce,Hits,CompressedIntegerList-method Hits-class-leftovers
coerce,Hits,DataFrame-method Hits-class-leftovers
coerce,Hits,Grouping Hits-class-leftovers
coerce,Hits,Grouping-method Grouping-class
coerce,Hits,IntegerList-method Hits-class-leftovers
coerce,Hits,List-method Hits-class-leftovers
coerce,integer,IRanges-method IRanges-class
coerce,integer,NormalIRanges-method IRanges-class
coerce,IRanges,NormalIRanges-method IRanges-utils
coerce,List,CompressedIRangesList-method IRangesList-class
coerce,list,CompressedIRangesList-method IRangesList-class
coerce,List,CompressedSplitDataFrameList-method DataFrameList-class
coerce,List,IRangesList-method IRangesList-class
coerce,list,IRangesList-method IRangesList-class
coerce,list,RangesList-method RangesList-class
coerce,List,SimpleIRangesList-method IRangesList-class
coerce,list,SimpleIRangesList-method IRangesList-class
coerce,List,SimpleSplitDataFrameList-method DataFrameList-class
coerce,list,SplitDataFrameList-method DataFrameList-class
coerce,logical,IRanges-method IRanges-class
coerce,logical,NormalIRanges-method IRanges-class
coerce,LogicalList,CompressedNormalIRangesList-method IRangesList-class
coerce,LogicalList,NormalIRangesList-method IRangesList-class
coerce,LogicalList,SimpleNormalIRangesList-method IRangesList-class
coerce,ManyToOneGrouping,factor-method Grouping-class
coerce,MaskCollection,NormalIRanges-method MaskCollection-class
coerce,NCLists,CompressedIRangesList-method NCList-class
coerce,NCLists,IRangesList-method NCList-class
coerce,NormalIRangesList,CompressedNormalIRangesList-method IRangesList-class
coerce,numeric,IRanges-method IRanges-class
coerce,numeric,NormalIRanges-method IRanges-class
coerce,RangedData,CompressedIRangesList-method RangedData-class
coerce,RangedData,DataFrame-method RangedData-class
coerce,RangedData,IRangesList-method RangedData-class
coerce,RangedData,RangesList-method RangedData-class
coerce,Ranges,CompressedIRangesList-method IRangesList-class
coerce,Ranges,IPos-method IPos-class
coerce,Ranges,IRanges-method IRanges-class
coerce,Ranges,NCList-method NCList-class
coerce,Ranges,PartitioningByEnd-method Grouping-class
coerce,Ranges,PartitioningByWidth-method Grouping-class
coerce,Ranges,RangedData-method RangedData-class
coerce,Ranges,RangesList-method RangesList-class
coerce,RangesList,CompressedNormalIRangesList-method IRangesList-class
coerce,RangesList,NCLists-method NCList-class
coerce,RangesList,NormalIRangesList-method IRangesList-class
coerce,RangesList,RangedData-method RangedData-class
coerce,RangesList,RangedSelection-method RangedSelection-class
coerce,RangesList,SimpleIRangesList-method IRangesList-class
coerce,RangesList,SimpleNormalIRangesList-method IRangesList-class
coerce,RangesList,SimpleRangesList-method RangesList-class
coerce,Rle,IRanges-method Rle-class-leftovers
coerce,Rle,NormalIRanges-method Rle-class-leftovers
coerce,Rle,RangedData-method RangedData-class
coerce,RleList,CompressedNormalIRangesList-method IRangesList-class
coerce,RleList,NormalIRangesList-method IRangesList-class
coerce,RleList,RangedData-method RangedData-class
coerce,RleList,SimpleNormalIRangesList-method IRangesList-class
coerce,RleViewsList,CompressedIRangesList-method RleViewsList-class
coerce,RleViewsList,IRangesList-method RleViewsList-class
coerce,RleViewsList,RangedData-method RangedData-class
coerce,RleViewsList,SimpleIRangesList-method RleViewsList-class
coerce,SimpleIRangesList,SimpleNormalIRangesList-method IRangesList-class
coerce,SimpleList,SplitDataFrameList-method DataFrameList-class
coerce,SimpleRangesList,SimpleIRangesList-method IRangesList-class
coerce,SortedByQueryHits,CompressedIntegerList-method Hits-class-leftovers
coerce,SortedByQueryHits,IntegerList-method Hits-class-leftovers
coerce,SortedByQueryHits,IRanges-method Hits-class-leftovers
coerce,SortedByQueryHits,List-method Hits-class-leftovers
coerce,SortedByQueryHits,Partitioning-method Hits-class-leftovers
coerce,SortedByQueryHits,PartitioningByEnd-method Hits-class-leftovers
coerce,SortedByQueryHits,Ranges-method Hits-class-leftovers
coerce,SplitDataFrameList,DataFrame-method DataFrameList-class
coerce,vector,AtomicList-method AtomicList-class
coerce,vector,CompressedCharacterList-method AtomicList-class
coerce,vector,CompressedComplexList-method AtomicList-class
coerce,vector,CompressedIntegerList-method AtomicList-class
coerce,vector,CompressedLogicalList-method AtomicList-class
coerce,vector,CompressedNumericList-method AtomicList-class
coerce,vector,CompressedRawList-method AtomicList-class
coerce,vector,CompressedRleList-method AtomicList-class
coerce,vector,Grouping-method Grouping-class
coerce,vector,ManyToManyGrouping-method Grouping-class
coerce,vector,ManyToOneGrouping-method Grouping-class
coerce,vector,SimpleCharacterList-method AtomicList-class
coerce,vector,SimpleComplexList-method AtomicList-class
coerce,vector,SimpleIntegerList-method AtomicList-class
coerce,vector,SimpleLogicalList-method AtomicList-class
coerce,vector,SimpleNumericList-method AtomicList-class
coerce,vector,SimpleRawList-method AtomicList-class
coerce,vector,SimpleRleList-method AtomicList-class
coerce,Vector,Views-method Views-class
coerce,Views,IRanges-method Views-class
coerce,Views,NormalIRanges-method Views-class
coerce,Views,Ranges-method Views-class
collapse MaskCollection-class
collapse,MaskCollection-method MaskCollection-class
colnames,CompressedSplitDataFrameList-method DataFrameList-class
colnames,DataFrameList-method DataFrameList-class
colnames,RangedData-method RangedData-class
colnames,RangedSelection-method RangedSelection-class
colnames,SimpleSplitDataFrameList-method DataFrameList-class
colnames<-,CompressedSplitDataFrameList-method DataFrameList-class
colnames<-,RangedData-method RangedData-class
colnames<-,RangedSelection-method RangedSelection-class
colnames<-,SimpleDataFrameList-method DataFrameList-class
columnMetadata DataFrameList-class
columnMetadata,CompressedSplitDataFrameList-method DataFrameList-class
columnMetadata,RangedData-method RangedData-class
columnMetadata,SimpleSplitDataFrameList-method DataFrameList-class
columnMetadata<- DataFrameList-class
columnMetadata<-,CompressedSplitDataFrameList-method DataFrameList-class
columnMetadata<-,RangedData-method RangedData-class
columnMetadata<-,SimpleSplitDataFrameList-method DataFrameList-class
Complex,CompressedAtomicList-method AtomicList-utils
Complex,SimpleAtomicList-method AtomicList-utils
ComplexList AtomicList-class
ComplexList-class AtomicList-class
CompressedAtomicList AtomicList-class
CompressedAtomicList-class AtomicList-class
CompressedCharacterList AtomicList-class
CompressedCharacterList-class AtomicList-class
CompressedComplexList AtomicList-class
CompressedComplexList-class AtomicList-class
CompressedFactorList AtomicList-class
CompressedFactorList-class AtomicList-class
CompressedGrouping-class Grouping-class
CompressedHitsList CompressedHitsList-class
CompressedHitsList-class CompressedHitsList-class
CompressedIntegerList AtomicList-class
CompressedIntegerList-class AtomicList-class
CompressedIRangesList IRangesList-class
CompressedIRangesList-class IRangesList-class
CompressedList CompressedList-class
CompressedList-class CompressedList-class
CompressedLogicalList AtomicList-class
CompressedLogicalList-class AtomicList-class
CompressedManyToManyGrouping-class Grouping-class
CompressedManyToOneGrouping-class Grouping-class
CompressedNormalIRangesList IRangesList-class
CompressedNormalIRangesList-class IRangesList-class
CompressedNumericList AtomicList-class
CompressedNumericList-class AtomicList-class
CompressedRawList AtomicList-class
CompressedRawList-class AtomicList-class
CompressedRleList AtomicList-class
CompressedRleList-class AtomicList-class
CompressedSplitDataFrameList-class DataFrameList-class
cor,AtomicList,AtomicList-method AtomicList-utils
countOverlaps findOverlaps-methods
countOverlaps,RangedData,RangedData-method findOverlaps-methods
countOverlaps,RangedData,RangesList-method findOverlaps-methods
countOverlaps,Ranges,Ranges-method findOverlaps-methods
countOverlaps,RangesList,RangedData-method findOverlaps-methods
countOverlaps,RangesList,RangesList-method findOverlaps-methods
countOverlaps,Vector,missing-method findOverlaps-methods
countOverlaps,Vector,Vector-method findOverlaps-methods
countOverlaps,Vector,ViewsList-method findOverlaps-methods
countOverlaps,ViewsList,Vector-method findOverlaps-methods
countOverlaps,ViewsList,ViewsList-method findOverlaps-methods
cov,AtomicList,AtomicList-method AtomicList-utils
coverage coverage-methods
coverage,RangedData-method coverage-methods
coverage,Ranges-method coverage-methods
coverage,RangesList-method coverage-methods
coverage,Views-method coverage-methods
coverage-methods coverage-methods
cummax,CompressedAtomicList-method AtomicList-utils
cummin,CompressedAtomicList-method AtomicList-utils
cumprod,CompressedAtomicList-method AtomicList-utils
cumsum,CompressedAtomicList-method AtomicList-utils
DataFrame-utils DataFrame-utils
DataFrameList DataFrameList-class
DataFrameList-class DataFrameList-class
desc MaskCollection-class
desc,MaskCollection-method MaskCollection-class
desc<- MaskCollection-class
desc<-,MaskCollection-method MaskCollection-class
diff,CompressedAtomicList-method AtomicList-utils
diff.AtomicList AtomicList-utils
dim,DataFrameList-method DataFrameList-class
dimnames,DataFrameList-method DataFrameList-class
dimnames<-,DataFrameList-method DataFrameList-class
disjoin inter-range-methods
disjoin,CompressedIRangesList-method inter-range-methods
disjoin,NormalIRanges-method inter-range-methods
disjoin,Ranges-method inter-range-methods
disjoin,RangesList-method inter-range-methods
disjointBins inter-range-methods
disjointBins,NormalIRanges-method inter-range-methods
disjointBins,Ranges-method inter-range-methods
disjointBins,RangesList-method inter-range-methods
distance nearest-methods
distance,Pairs,missing-method nearest-methods
distance,Ranges,Ranges-method nearest-methods
distanceToNearest nearest-methods
distanceToNearest,Ranges,RangesORmissing-method nearest-methods
drop,AtomicList-method AtomicList-class
duplicated,CompressedAtomicList-method AtomicList-class
duplicated,CompressedList-method AtomicList-class
duplicated,Dups-method Grouping-class
Dups Grouping-class
Dups-class Grouping-class
elementNROWS,CompressedList-method CompressedList-class
elementNROWS,NCLists-method NCList-class
elementNROWS,RangedData-method RangedData-class
elementNROWS,Ranges-method Ranges-class
elementNROWS,Views-method Views-class
end,CompressedIRangesList-method IRangesList-class
end,IPos-method IPos-class
end,NCList-method NCList-class
end,NCLists-method NCList-class
end,PartitioningByEnd-method Grouping-class
end,PartitioningByWidth-method Grouping-class
end,RangedData-method RangedData-class
end,Ranges-method Ranges-class
end,RangesList-method RangesList-class
end,SimpleViewsList-method ViewsList-class
end,Views-method Views-class
end<- Ranges-class
end<-,IRanges-method IRanges-class
end<-,RangedData-method RangedData-class
end<-,RangesList-method RangesList-class
end<-,Views-method Views-class
endoapply,CompressedList-method CompressedList-class
endoapply,RangedData-method RangedData-class
eval Vector-class-leftovers
eval,expression,Vector-method Vector-class-leftovers
eval,language,Vector-method Vector-class-leftovers
extractList extractList
extractList,ANY,ANY-method extractList
extractList,ANY-method extractList
extractROWS,IPos-method IPos-class
FactorList AtomicList-class
FactorList-class AtomicList-class
findOverlapPairs findOverlaps-methods
findOverlaps findOverlaps-methods
findOverlaps,ANY,Pairs-method findOverlaps-methods
findOverlaps,integer,Ranges-method findOverlaps-methods
findOverlaps,Pairs,ANY-method findOverlaps-methods
findOverlaps,Pairs,missing-method findOverlaps-methods
findOverlaps,Pairs,Pairs-method findOverlaps-methods
findOverlaps,RangedData,RangedData-method findOverlaps-methods
findOverlaps,RangedData,RangesList-method findOverlaps-methods
findOverlaps,Ranges,Ranges-method findOverlaps-methods
findOverlaps,RangesList,RangedData-method findOverlaps-methods
findOverlaps,RangesList,RangesList-method findOverlaps-methods
findOverlaps,Vector,missing-method findOverlaps-methods
findOverlaps,Vector,Views-method findOverlaps-methods
findOverlaps,Vector,ViewsList-method findOverlaps-methods
findOverlaps,Views,Vector-method findOverlaps-methods
findOverlaps,Views,Views-method findOverlaps-methods
findOverlaps,ViewsList,Vector-method findOverlaps-methods
findOverlaps,ViewsList,ViewsList-method findOverlaps-methods
findOverlaps-methods findOverlaps-methods
findRange Rle-class-leftovers
findRange,Rle-method Rle-class-leftovers
flank intra-range-methods
flank,CompressedIRangesList-method intra-range-methods
flank,Ranges-method intra-range-methods
flank,RangesList-method intra-range-methods
follow nearest-methods
follow,Ranges,RangesORmissing-method nearest-methods
from,CompressedHitsList-method CompressedHitsList-class
gaps inter-range-methods
gaps,CompressedIRangesList-method inter-range-methods
gaps,MaskCollection-method inter-range-methods
gaps,Ranges-method inter-range-methods
gaps,RangesList-method inter-range-methods
gaps,Views-method inter-range-methods
Grouping Grouping-class
Grouping-class Grouping-class
GroupingIRanges Grouping-class
GroupingIRanges-class Grouping-class
GroupingRanges Grouping-class
GroupingRanges-class Grouping-class
grouplengths Grouping-class
grouplengths,CompressedGrouping-method Grouping-class
grouplengths,Grouping-method Grouping-class
grouplengths,GroupingRanges-method Grouping-class
grouplengths,H2LGrouping-method Grouping-class
grouprank Grouping-class
grouprank,H2LGrouping-method Grouping-class
gsub,ANY,ANY,CompressedCharacterList-method AtomicList-utils
gsub,ANY,ANY,CompressedRleList-method AtomicList-utils
gsub,ANY,ANY,SimpleCharacterList-method AtomicList-utils
gsub,ANY,ANY,SimpleRleList-method AtomicList-utils
H2LGrouping Grouping-class
H2LGrouping-class Grouping-class
high2low Grouping-class
high2low,ANY-method Grouping-class
high2low,H2LGrouping-method Grouping-class
Hits-examples Hits-class-leftovers
ifelse2 AtomicList-utils
ifelse2,ANY,ANY,List-method AtomicList-utils
ifelse2,ANY,List,ANY-method AtomicList-utils
ifelse2,CompressedLogicalList,ANY,ANY-method AtomicList-utils
ifelse2,CompressedLogicalList,ANY,List-method AtomicList-utils
ifelse2,CompressedLogicalList,List,ANY-method AtomicList-utils
ifelse2,CompressedLogicalList,List,List-method AtomicList-utils
ifelse2,List,ANY,ANY-method AtomicList-utils
ifelse2,SimpleLogicalList,ANY,ANY-method AtomicList-utils
ifelse2,SimpleLogicalList,ANY,List-method AtomicList-utils
ifelse2,SimpleLogicalList,List,ANY-method AtomicList-utils
ifelse2,SimpleLogicalList,List,List-method AtomicList-utils
IntegerList AtomicList-class
IntegerList-class AtomicList-class
inter-range-methods inter-range-methods
intersect setops-methods
intersect,CompressedAtomicList,CompressedAtomicList-method AtomicList-utils
intersect,CompressedIRangesList,CompressedIRangesList-method setops-methods
intersect,Pairs,missing-method setops-methods
intersect,Ranges,Ranges-method setops-methods
intersect,RangesList,RangesList-method setops-methods
intra-range-methods intra-range-methods
IPos IPos-class
IPos-class IPos-class
IQR,AtomicList-method AtomicList-utils
IRanges IRanges-constructor
IRanges-class IRanges-class
IRanges-constructor IRanges-constructor
IRanges-utils IRanges-utils
IRangesList IRangesList-class
IRangesList-class IRangesList-class
is.na,CompressedList-method CompressedList-class
is.unsorted,Ranges-method Ranges-comparison
isDisjoint inter-range-methods
isDisjoint,IPos-method inter-range-methods
isDisjoint,NormalIRanges-method inter-range-methods
isDisjoint,Ranges-method inter-range-methods
isDisjoint,RangesList-method inter-range-methods
isEmpty,NormalIRanges-method IRanges-class
isEmpty,Ranges-method Ranges-class
isNormal Ranges-class
isNormal,CompressedIRangesList-method IRangesList-class
isNormal,IRanges-method IRanges-class
isNormal,NormalIRanges-method IRanges-class
isNormal,Ranges-method Ranges-class
isNormal,RangesList-method RangesList-class
isNormal,SimpleIRangesList-method IRangesList-class
lapply,CompressedAtomicList-method AtomicList-class
lapply,CompressedList-method CompressedList-class
lapply,RangedData-method RangedData-class
length,CompressedList-method CompressedList-class
length,H2LGrouping-method Grouping-class
length,IPos-method IPos-class
length,MaskCollection-method MaskCollection-class
length,NCList-method NCList-class
length,NCLists-method NCList-class
length,PartitioningByEnd-method Grouping-class
length,RangedData-method RangedData-class
length,Ranges-method Ranges-class
length,Views-method Views-class
length<-,H2LGrouping-method Grouping-class
LogicalList AtomicList-class
LogicalList-class AtomicList-class
low2high Grouping-class
low2high,H2LGrouping-method Grouping-class
mad,AtomicList-method AtomicList-utils
ManyToManyGrouping Grouping-class
ManyToManyGrouping-class Grouping-class
ManyToOneGrouping Grouping-class
ManyToOneGrouping-class Grouping-class
mapOrder Grouping-class
mapOrder,PartitioningMap-method Grouping-class
Mask MaskCollection-class
MaskCollection MaskCollection-class
MaskCollection-class MaskCollection-class
MaskCollection.show_frame MaskCollection-class
maskedratio MaskCollection-class
maskedratio,MaskCollection-method MaskCollection-class
maskedwidth MaskCollection-class
maskedwidth,MaskCollection-method MaskCollection-class
match,CompressedList,vector-method CompressedList-class
match,Ranges,Ranges-method Ranges-comparison
Math,CompressedAtomicList-method AtomicList-utils
Math,SimpleAtomicList-method AtomicList-utils
Math2,CompressedAtomicList-method AtomicList-utils
Math2,SimpleAtomicList-method AtomicList-utils
max,CompressedNormalIRangesList-method IRangesList-class
max,MaskCollection-method MaskCollection-class
max,NormalIRanges-method IRanges-class
max,SimpleNormalIRangesList-method IRangesList-class
max,Views-method view-summarization-methods
mean,AtomicList-method AtomicList-utils
mean,CompressedIntegerList-method AtomicList-utils
mean,CompressedLogicalList-method AtomicList-utils
mean,CompressedNumericList-method AtomicList-utils
mean,CompressedRleList-method AtomicList-utils
mean,Views-method view-summarization-methods
median,AtomicList-method AtomicList-utils
median,CompressedAtomicList-method AtomicList-utils
members Grouping-class
members,H2LGrouping-method Grouping-class
members,ManyToOneGrouping-method Grouping-class
mendoapply,CompressedList-method CompressedList-class
merge,missing,RangesList-method RangesList-class
merge,RangesList,missing-method RangesList-class
merge,RangesList,RangesList-method RangesList-class
mergeByOverlaps findOverlaps-methods
mid Ranges-class
mid,Ranges-method Ranges-class
min,CompressedNormalIRangesList-method IRangesList-class
min,MaskCollection-method MaskCollection-class
min,NormalIRanges-method IRanges-class
min,SimpleNormalIRangesList-method IRangesList-class
min,Views-method view-summarization-methods
mstack Vector-class-leftovers
mstack,DataFrame-method DataFrame-utils
mstack,Vector-method Vector-class-leftovers
mstack,vector-method Vector-class-leftovers
multisplit multisplit
names,CompressedList-method CompressedList-class
names,IPos-method IPos-class
names,IRanges-method IRanges-class
names,MaskCollection-method MaskCollection-class
names,NCList-method NCList-class
names,NCLists-method NCList-class
names,Partitioning-method Grouping-class
names,RangedData-method RangedData-class
names,Views-method Views-class
names<-,CompressedList-method CompressedList-class
names<-,IPos-method IPos-class
names<-,IRanges-method IRanges-class
names<-,MaskCollection-method MaskCollection-class
names<-,Partitioning-method Grouping-class
names<-,RangedData-method RangedData-class
names<-,Views-method Views-class
narrow intra-range-methods
narrow,CompressedIRangesList-method intra-range-methods
narrow,MaskCollection-method intra-range-methods
narrow,Ranges-method intra-range-methods
narrow,RangesList-method intra-range-methods
narrow,Views-method intra-range-methods
nchar,CompressedCharacterList-method AtomicList-utils
nchar,CompressedRleList-method AtomicList-utils
nchar,SimpleCharacterList-method AtomicList-utils
nchar,SimpleRleList-method AtomicList-utils
NCList NCList-class
NCList-class NCList-class
NCLists NCList-class
NCLists-class NCList-class
ncol,CompressedSplitDataFrameList-method DataFrameList-class
ncol,DataFrameList-method DataFrameList-class
ncol,RangedData-method RangedData-class
ncol,SimpleSplitDataFrameList-method DataFrameList-class
nearest nearest-methods
nearest,Ranges,RangesORmissing-method nearest-methods
nearest-methods nearest-methods
nir_list MaskCollection-class
nir_list,MaskCollection-method MaskCollection-class
nLnode,CompressedHitsList-method CompressedHitsList-class
nobj Grouping-class
nobj,BaseManyToManyGrouping-method Grouping-class
nobj,CompressedManyToOneGrouping-method Grouping-class
nobj,H2LGrouping-method Grouping-class
nobj,ManyToManyGrouping-method Grouping-class
nobj,ManyToOneGrouping-method Grouping-class
nobj,PartitioningByEnd-method Grouping-class
NormalIRanges IRanges-class
NormalIRanges-class IRanges-class
NormalIRangesList IRangesList-class
NormalIRangesList-class IRangesList-class
nRnode,CompressedHitsList-method CompressedHitsList-class
nrow,DataFrameList-method DataFrameList-class
nrow,RangedData-method RangedData-class
NumericList AtomicList-class
NumericList-class AtomicList-class
Ops,atomic,AtomicList-method AtomicList-utils
Ops,atomic,CompressedAtomicList-method AtomicList-utils
Ops,atomic,SimpleAtomicList-method AtomicList-utils
Ops,AtomicList,atomic-method AtomicList-utils
Ops,CompressedAtomicList,atomic-method AtomicList-utils
Ops,CompressedAtomicList,CompressedAtomicList-method AtomicList-utils
Ops,CompressedAtomicList,SimpleAtomicList-method AtomicList-utils
Ops,CompressedIRangesList,numeric-method intra-range-methods
Ops,Ranges,ANY-method intra-range-methods
Ops,Ranges,numeric-method intra-range-methods
Ops,RangesList,numeric-method intra-range-methods
Ops,SimpleAtomicList,atomic-method AtomicList-utils
Ops,SimpleAtomicList,CompressedAtomicList-method AtomicList-utils
Ops,SimpleAtomicList,SimpleAtomicList-method AtomicList-utils
order,CompressedAtomicList-method AtomicList-utils
order,List-method AtomicList-class
order,Ranges-method Ranges-comparison
overlapsAny findOverlaps-methods
overlapsAny,RangedData,RangedData-method findOverlaps-methods
overlapsAny,RangedData,RangesList-method findOverlaps-methods
overlapsAny,RangesList,RangedData-method findOverlaps-methods
overlapsAny,RangesList,RangesList-method findOverlaps-methods
overlapsAny,Vector,missing-method findOverlaps-methods
overlapsAny,Vector,Vector-method findOverlaps-methods
overlapsAny,Vector,ViewsList-method findOverlaps-methods
overlapsAny,ViewsList,Vector-method findOverlaps-methods
overlapsAny,ViewsList,ViewsList-method findOverlaps-methods
overlapsRanges findOverlaps-methods
overlapsRanges,Ranges,Ranges-method findOverlaps-methods
overlapsRanges,RangesList,RangesList-method findOverlaps-methods
Partitioning Grouping-class
Partitioning-class Grouping-class
PartitioningByEnd Grouping-class
PartitioningByEnd-class Grouping-class
PartitioningByWidth Grouping-class
PartitioningByWidth-class Grouping-class
PartitioningMap Grouping-class
PartitioningMap-class Grouping-class
paste,CompressedAtomicList-method AtomicList-utils
pcompare Ranges-comparison
pcompare,Ranges,Ranges-method Ranges-comparison
pgap setops-methods
pgap,Ranges,Ranges-method setops-methods
pintersect setops-methods
pintersect,Pairs,missing-method setops-methods
pintersect,Ranges,Ranges-method setops-methods
pmax,IntegerList-method AtomicList-utils
pmax,NumericList-method AtomicList-utils
pmax,RleList-method AtomicList-utils
pmax.int,IntegerList-method AtomicList-utils
pmax.int,NumericList-method AtomicList-utils
pmax.int,RleList-method AtomicList-utils
pmin,IntegerList-method AtomicList-utils
pmin,NumericList-method AtomicList-utils
pmin,RleList-method AtomicList-utils
pmin.int,IntegerList-method AtomicList-utils
pmin.int,NumericList-method AtomicList-utils
pmin.int,RleList-method AtomicList-utils
pos IPos-class
pos,IPos-method IPos-class
poverlaps findOverlaps-methods
poverlaps,integer,Ranges-method findOverlaps-methods
poverlaps,Ranges,integer-method findOverlaps-methods
poverlaps,Ranges,Ranges-method findOverlaps-methods
precede nearest-methods
precede,Ranges,RangesORmissing-method nearest-methods
promoters intra-range-methods
promoters,CompressedIRangesList-method intra-range-methods
promoters,Ranges-method intra-range-methods
promoters,RangesList-method intra-range-methods
promoters,Views-method intra-range-methods
psetdiff setops-methods
psetdiff,Pairs,missing-method setops-methods
psetdiff,Ranges,Ranges-method setops-methods
punion setops-methods
punion,Pairs,missing-method setops-methods
punion,Ranges,Ranges-method setops-methods
quantile,AtomicList-method AtomicList-utils
range inter-range-methods
range,CompressedIntegerList-method AtomicList-utils
range,CompressedIRangesList-method inter-range-methods
range,CompressedLogicalList-method AtomicList-utils
range,CompressedNumericList-method AtomicList-utils
range,IPos-method inter-range-methods
range,RangedData-method inter-range-methods
range,Ranges-method inter-range-methods
range,RangesList-method inter-range-methods
range-squeezers range-squeezers
rangeComparisonCodeToLetter Ranges-comparison
RangedData RangedData-class
RangedData-class RangedData-class
RangedSelection RangedSelection-class
RangedSelection-class RangedSelection-class
Ranges Ranges-class
ranges range-squeezers
ranges,CompressedRleList-method AtomicList-class
ranges,Hits-method findOverlaps-methods
ranges,HitsList-method findOverlaps-methods
ranges,NCLists-method NCList-class
ranges,RangedData-method RangedData-class
ranges,RangedSelection-method RangedSelection-class
ranges,Ranges-method IRanges-class
ranges,Rle-method Rle-class-leftovers
ranges,RleList-method AtomicList-class
ranges,SimpleViewsList-method ViewsList-class
ranges,Views-method Views-class
Ranges-class Ranges-class
Ranges-comparison Ranges-comparison
ranges<- Views-class
ranges<-,RangedData-method RangedData-class
ranges<-,RangedSelection-method RangedSelection-class
ranges<-,Views-method Views-class
RangesList RangesList-class
RangesList-class RangesList-class
RangesORmissing nearest-methods
RangesORmissing-class nearest-methods
rank,CompressedAtomicList-method AtomicList-utils
rank,List-method AtomicList-class
RawList AtomicList-class
RawList-class AtomicList-class
rbind,DataFrameList-method DataFrameList-class
rbind,RangedData-method RangedData-class
read.agpMask read.Mask
read.gapMask read.Mask
read.liftMask read.Mask
read.Mask read.Mask
read.rmMask read.Mask
read.trfMask read.Mask
reduce inter-range-methods
reduce,CompressedIRangesList-method inter-range-methods
reduce,Ranges-method inter-range-methods
reduce,RangesList-method inter-range-methods
reduce,Views-method inter-range-methods
reflect intra-range-methods
reflect,Ranges-method intra-range-methods
regroup extractList
relist,ANY,List-method extractList
relist,ANY,PartitioningByEnd-method extractList
relist,Vector,list-method extractList
relistToClass,data.frame-method DataFrame-utils
relistToClass,DataFrame-method DataFrame-utils
rep,Vector-method Vector-class-leftovers
rep.int,Vector-method Vector-class-leftovers
resize intra-range-methods
resize,CompressedIRangesList-method intra-range-methods
resize,IntervalList-method intra-range-methods
resize,Ranges-method intra-range-methods
resize,RangesList-method intra-range-methods
restrict intra-range-methods
restrict,CompressedIRangesList-method intra-range-methods
restrict,Ranges-method intra-range-methods
restrict,RangesList-method intra-range-methods
rev,Vector-method Vector-class-leftovers
revElements,CompressedList-method CompressedList-class
reverse reverse-methods
reverse,character-method reverse-methods
reverse,IRanges-method reverse-methods
reverse,MaskCollection-method reverse-methods
reverse,NormalIRanges-method reverse-methods
reverse,Views-method reverse-methods
rglist range-squeezers
rglist,Pairs-method range-squeezers
RleList AtomicList-class
RleList,AtomicList,RleList-method AtomicList-class
RleList-class AtomicList-class
RleViews RleViews-class
RleViews-class RleViews-class
RleViewsList RleViewsList-class
RleViewsList-class RleViewsList-class
rownames,DataFrameList-method DataFrameList-class
rownames,RangedData-method RangedData-class
rownames<-,CompressedSplitDataFrameList-method DataFrameList-class
rownames<-,RangedData-method RangedData-class
rownames<-,SimpleDataFrameList-method DataFrameList-class
runLength,CompressedRleList-method AtomicList-class
runLength,RleList-method AtomicList-class
runmean,RleList-method AtomicList-utils
runmed,CompressedIntegerList-method AtomicList-utils
runmed,NumericList-method AtomicList-utils
runmed,RleList-method AtomicList-utils
runmed,SimpleIntegerList-method AtomicList-utils
runq,RleList-method AtomicList-utils
runsum,RleList-method AtomicList-utils
runValue,CompressedRleList-method AtomicList-class
runValue,RleList-method AtomicList-class
runValue<-,CompressedRleList-method AtomicList-class
runValue<-,SimpleRleList-method AtomicList-class
runwtsum,RleList-method AtomicList-utils
score,RangedData-method RangedData-class
score<-,RangedData-method RangedData-class
sd,AtomicList-method AtomicList-utils
selectNearest nearest-methods
selfmatch,CompressedAtomicList-method AtomicList-utils
selfmatch,Ranges-method Ranges-comparison
setdiff setops-methods
setdiff,CompressedIRangesList,CompressedIRangesList-method setops-methods
setdiff,Pairs,missing-method setops-methods
setdiff,Ranges,Ranges-method setops-methods
setdiff,RangesList,RangesList-method setops-methods
setops-methods setops-methods
shift intra-range-methods
shift,CompressedIRangesList-method intra-range-methods
shift,IPos-method intra-range-methods
shift,Ranges-method intra-range-methods
shift,RangesList-method intra-range-methods
shift,Views-method intra-range-methods
show,AtomicList-method AtomicList-class
show,Dups-method Grouping-class
show,Grouping-method Grouping-class
show,IPos-method IPos-class
show,MaskCollection-method MaskCollection-class
show,PartitioningMap-method Grouping-class
show,RangedData-method RangedData-class
show,Ranges-method Ranges-class
show,RangesList-method RangesList-class
show,RleList-method AtomicList-class
show,RleViews-method RleViews-class
show,SplitDataFrameList-method DataFrameList-class
showAsCell,Ranges-method Ranges-class
showAsCell,RangesList-method RangesList-class
SimpleAtomicList AtomicList-class
SimpleAtomicList-class AtomicList-class
SimpleCharacterList AtomicList-class
SimpleCharacterList-class AtomicList-class
SimpleComplexList AtomicList-class
SimpleComplexList-class AtomicList-class
SimpleDataFrameList-class DataFrameList-class
SimpleFactorList AtomicList-class
SimpleFactorList-class AtomicList-class
SimpleGrouping-class Grouping-class
SimpleIntegerList AtomicList-class
SimpleIntegerList-class AtomicList-class
SimpleIRangesList IRangesList-class
SimpleIRangesList-class IRangesList-class
SimpleLogicalList AtomicList-class
SimpleLogicalList-class AtomicList-class
SimpleManyToManyGrouping-class Grouping-class
SimpleManyToOneGrouping-class Grouping-class
SimpleNormalIRangesList IRangesList-class
SimpleNormalIRangesList-class IRangesList-class
SimpleNumericList AtomicList-class
SimpleNumericList-class AtomicList-class
SimpleRangesList RangesList-class
SimpleRangesList-class RangesList-class
SimpleRawList AtomicList-class
SimpleRawList-class AtomicList-class
SimpleRleList AtomicList-class
SimpleRleList-class AtomicList-class
SimpleRleViewsList-class RleViewsList-class
SimpleSplitDataFrameList-class DataFrameList-class
SimpleViewsList ViewsList-class
SimpleViewsList-class ViewsList-class
slice slice-methods
slice,ANY-method slice-methods
slice,Rle-method slice-methods
slice,RleList-method slice-methods
slice-methods slice-methods
slidingWindows Ranges-class
slidingWindows,Ranges-method Ranges-class
smoothEnds,CompressedIntegerList-method AtomicList-utils
smoothEnds,NumericList-method AtomicList-utils
smoothEnds,RleList-method AtomicList-utils
smoothEnds,SimpleIntegerList-method AtomicList-utils
solveUserSEW IRanges-constructor
solveUserSEW0 IRanges-constructor
sort,List-method AtomicList-class
space RangesList-class
space,CompressedHitsList-method CompressedHitsList-class
space,RangedData-method RangedData-class
space,RangesList-method RangesList-class
split<-,Vector-method seqapply
splitAsList extractList
splitAsList,ANY,ANY extractList
SplitDataFrameList DataFrameList-class
SplitDataFrameList-class DataFrameList-class
splitRanges Rle-class-leftovers
splitRanges,Rle-method Rle-class-leftovers
splitRanges,vector_OR_factor-method Rle-class-leftovers
stack,DataFrameList-method DataFrameList-class
stack,List-method List-class-leftovers
start,CompressedIRangesList-method IRangesList-class
start,IPos-method IPos-class
start,IRanges-method IRanges-class
start,NCList-method NCList-class
start,NCLists-method NCList-class
start,PartitioningByEnd-method Grouping-class
start,PartitioningByWidth-method Grouping-class
start,RangedData-method RangedData-class
start,Ranges-method Ranges-class
start,RangesList-method RangesList-class
start,SimpleViewsList-method ViewsList-class
start,Views-method Views-class
start<- Ranges-class
start<-,IRanges-method IRanges-class
start<-,RangedData-method RangedData-class
start<-,RangesList-method RangesList-class
start<-,Views-method Views-class
sub,ANY,ANY,CompressedCharacterList-method AtomicList-utils
sub,ANY,ANY,CompressedRleList-method AtomicList-utils
sub,ANY,ANY,SimpleCharacterList-method AtomicList-utils
sub,ANY,ANY,SimpleRleList-method AtomicList-utils
subject Views-class
subject,SimpleRleViewsList-method RleViewsList-class
subject,Views-method Views-class
subset,Vector-method Vector-class-leftovers
subsetByOverlaps findOverlaps-methods
subsetByOverlaps,RangedData,RangedData-method findOverlaps-methods
subsetByOverlaps,RangedData,RangesList-method findOverlaps-methods
subsetByOverlaps,RangesList,RangedData-method findOverlaps-methods
subsetByOverlaps,Vector,Vector-method findOverlaps-methods
subviews Views-class
subviews,Views-method Views-class
successiveIRanges IRanges-utils
successiveViews Views-class
sum,CompressedIntegerList-method AtomicList-utils
sum,CompressedLogicalList-method AtomicList-utils
sum,CompressedNumericList-method AtomicList-utils
sum,Views-method view-summarization-methods
Summary,AtomicList-method AtomicList-utils
summary,CompressedIRangesList-method IRangesList-class
Summary,CompressedRleList-method AtomicList-utils
Summary,Views-method view-summarization-methods
table,AtomicList-method AtomicList-class
table,SimpleAtomicList-method AtomicList-class
tapply,ANY,Vector-method Vector-class-leftovers
tapply,Vector,ANY-method Vector-class-leftovers
tapply,Vector,Vector-method Vector-class-leftovers
threebands intra-range-methods
threebands,IRanges-method intra-range-methods
tile Ranges-class
tile,Ranges-method Ranges-class
to,CompressedHitsList-method CompressedHitsList-class
togroup Grouping-class
togroup,ANY-method Grouping-class
togroup,H2LGrouping-method Grouping-class
togroup,ManyToOneGrouping-method Grouping-class
togroup,Partitioning-method Grouping-class
togrouplength Grouping-class
togrouplength,ManyToOneGrouping-method Grouping-class
togrouprank Grouping-class
togrouprank,H2LGrouping-method Grouping-class
tolower,CompressedCharacterList-method AtomicList-utils
tolower,CompressedRleList-method AtomicList-utils
tolower,SimpleCharacterList-method AtomicList-utils
tolower,SimpleRleList-method AtomicList-utils
toupper,CompressedCharacterList-method AtomicList-utils
toupper,CompressedRleList-method AtomicList-utils
toupper,SimpleCharacterList-method AtomicList-utils
toupper,SimpleRleList-method AtomicList-utils
transform,SplitDataFrameList-method DataFrameList-class
trim Views-class
trim,Views-method Views-class
union setops-methods
union,CompressedIRangesList,CompressedIRangesList-method setops-methods
union,Pairs,missing-method setops-methods
union,Ranges,Ranges-method setops-methods
union,RangesList,RangesList-method setops-methods
unique,CompressedList-method AtomicList-class
unique,RleList-method AtomicList-class
universe RangesList-class
universe,RangedData-method RangedData-class
universe,RangesList-method RangesList-class
universe,ViewsList-method ViewsList-class
universe<- RangesList-class
universe<-,RangedData-method RangedData-class
universe<-,RangesList-method RangesList-class
universe<-,ViewsList-method ViewsList-class
unlist,CompressedList-method CompressedList-class
unlist,Ranges-method Ranges-class
unlist,SimpleFactorList-method AtomicList-class
unlist,SimpleNormalIRangesList-method IRangesList-class
unlist,SimpleRleList-method AtomicList-class
unsplit,List-method seqapply
unstrsplit,CharacterList-method AtomicList-utils
unstrsplit,RleList-method AtomicList-utils
update,IRanges-method IRanges-class
update,Ranges-method Ranges-class
values,RangedData-method RangedData-class
values<-,RangedData-method RangedData-class
var,AtomicList,AtomicList-method AtomicList-utils
var,AtomicList,missing-method AtomicList-utils
view-summarization-methods view-summarization-methods
viewApply view-summarization-methods
viewApply,RleViews-method view-summarization-methods
viewApply,RleViewsList-method view-summarization-methods
viewApply,Views-method view-summarization-methods
viewMaxs view-summarization-methods
viewMaxs,RleViews-method view-summarization-methods
viewMaxs,RleViewsList-method view-summarization-methods
viewMeans view-summarization-methods
viewMeans,RleViews-method view-summarization-methods
viewMeans,RleViewsList-method view-summarization-methods
viewMins view-summarization-methods
viewMins,RleViews-method view-summarization-methods
viewMins,RleViewsList-method view-summarization-methods
viewRangeMaxs view-summarization-methods
viewRangeMaxs,RleViews-method view-summarization-methods
viewRangeMaxs,RleViewsList-method view-summarization-methods
viewRangeMins view-summarization-methods
viewRangeMins,RleViews-method view-summarization-methods
viewRangeMins,RleViewsList-method view-summarization-methods
Views Views-class
Views,Rle-method RleViews-class
Views,RleList-method RleViewsList-class
Views-class Views-class
ViewsList ViewsList-class
ViewsList-class ViewsList-class
viewSums view-summarization-methods
viewSums,RleViews-method view-summarization-methods
viewSums,RleViewsList-method view-summarization-methods
viewWhichMaxs view-summarization-methods
viewWhichMaxs,RleViews-method view-summarization-methods
viewWhichMaxs,RleViewsList-method view-summarization-methods
viewWhichMins view-summarization-methods
viewWhichMins,RleViews-method view-summarization-methods
viewWhichMins,RleViewsList-method view-summarization-methods
vmembers Grouping-class
vmembers,H2LGrouping-method Grouping-class
vmembers,ManyToOneGrouping-method Grouping-class
which,CompressedLogicalList-method AtomicList-utils
which,CompressedRleList-method AtomicList-utils
which,SimpleLogicalList-method AtomicList-utils
which,SimpleRleList-method AtomicList-utils
which.max,CompressedRleList-method AtomicList-utils
which.max,IntegerList-method AtomicList-utils
which.max,NumericList-method AtomicList-utils
which.max,RleList-method AtomicList-utils
which.max,Views-method view-summarization-methods
which.min,CompressedRleList-method AtomicList-utils
which.min,IntegerList-method AtomicList-utils
which.min,NumericList-method AtomicList-utils
which.min,RleList-method AtomicList-utils
which.min,Views-method view-summarization-methods
whichAsIRanges IRanges-utils
whichFirstNotNormal Ranges-class
whichFirstNotNormal,Ranges-method Ranges-class
whichFirstNotNormal,RangesList-method RangesList-class
width Ranges-class
width,CompressedIRangesList-method IRangesList-class
width,IPos-method IPos-class
width,IRanges-method IRanges-class
width,MaskCollection-method MaskCollection-class
width,NCList-method NCList-class
width,NCLists-method NCList-class
width,PartitioningByEnd-method Grouping-class
width,PartitioningByWidth-method Grouping-class
width,RangedData-method RangedData-class
width,Ranges-method Ranges-class
width,RangesList-method RangesList-class
width,SimpleViewsList-method ViewsList-class
width,Views-method Views-class
width<- Ranges-class
width<-,IRanges-method IRanges-class
width<-,RangedData-method RangedData-class
width<-,RangesList-method RangesList-class
width<-,Views-method Views-class
window<-,factor-method Vector-class-leftovers
window<-,Vector-method Vector-class-leftovers
window<-,vector-method Vector-class-leftovers
window<-.factor Vector-class-leftovers
window<-.Vector Vector-class-leftovers
window<-.vector Vector-class-leftovers
with,Vector-method Vector-class-leftovers
within,RangedData-method RangedData-class
[,CompressedSplitDataFrameList-method DataFrameList-class
[,RangedData-method RangedData-class
[,SimpleSplitDataFrameList-method DataFrameList-class
[<-,SplitDataFrameList-method DataFrameList-class
[[,RangedData-method RangedData-class
[[,SDFLWrapperForTransform-method DataFrameList-class
[[<-,CompressedList-method CompressedList-class
[[<-,RangedData-method RangedData-class
[[<-,SDFLWrapperForTransform-method DataFrameList-class
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