/usr/lib/R/site-library/multtest/NAMESPACE is in r-bioc-multtest 2.34.0-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 | useDynLib(multtest)
useDynLib(multtest, VScount=VScount)
import(methods, BiocGenerics, Biobase)
importFrom(graphics, plot)
importFrom(stats, update)
importFrom(survival, is.Surv)
importFrom(survival, coxph.control)
importFrom(survival, coxph.fit)
importFrom(MASS, mvrnorm)
importFrom(MASS, rlm)
importMethodsFrom(stats4, plot, summary)
#snow does not have a NAMESPACE
#importFrom(snow, clusterApply)
#importFrom(snow, LBclusterApply)
#importFrom(snow, clusterEvalQ)
#importFrom(snow, makeCluster)
#importFrom(snow, stopCluster)
exportClasses(MTP, EBMTP)
exportMethods(as.list, plot, summary, update, EBupdate, "[")
export(MTP, EBMTP, as.list, mt.maxT, mt.minP, mt.plot, mt.rawp2adjp,
mt.reject, mt.sample.label, mt.sample.rawp, mt.sample.teststat,
mt.teststat, mt.teststat.num.denum, meanX, diffmeanX, FX, blockFX,
twowayFX, lmX, lmY, coxY, get.Tn, boot.null, boot.resample,
center.only, center.scale, quant.trans, fwer2gfwer, fwer2tppfp,
fwer2fdr, get.index, ss.maxT, ss.minP, sd.maxT, sd.minP, wapply,
corr.Tn, corr.null, IC.Cor.NA, IC.CorXW.NA, insert.NA, diffs.1.N,
marg.samp, tQuantTrans, G.VS, ABH.h0, dens.est, Hsets, VScount,
mtp2ebmtp, ebmtp2mtp)
S3method(print, MTP)
S3method(print, EBMTP)
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