This file is indexed.

/usr/lib/R/ is in r-bioc-variantannotation 1.24.2-1.

This file is owned by root:root, with mode 0o755.

File Mime Type Owner Mode Size
..
/usr/lib/R/site-library/ root:root 0o755
/usr/lib/R/site-library/VariantAnnotation/ root:root 0o755
/usr/lib/R/site-library/VariantAnnotation/CITATION text/plain root:root 0o644 1.7 KB
/usr/lib/R/site-library/VariantAnnotation/DESCRIPTION text/plain root:root 0o644 1.7 KB
/usr/lib/R/site-library/VariantAnnotation/INDEX text/plain root:root 0o644 1.6 KB
/usr/lib/R/site-library/VariantAnnotation/Meta/ root:root 0o755
/usr/lib/R/site-library/VariantAnnotation/Meta/Rd.rds application/gzip root:root 0o644 3.3 KB
/usr/lib/R/site-library/VariantAnnotation/Meta/features.rds application/gzip root:root 0o644 112 bytes
/usr/lib/R/site-library/VariantAnnotation/Meta/hsearch.rds application/gzip root:root 0o644 3.4 KB
/usr/lib/R/site-library/VariantAnnotation/Meta/links.rds application/gzip root:root 0o644 2.9 KB
/usr/lib/R/site-library/VariantAnnotation/Meta/nsInfo.rds application/gzip root:root 0o644 1.6 KB
/usr/lib/R/site-library/VariantAnnotation/Meta/package.rds application/gzip root:root 0o644 1.6 KB
/usr/lib/R/site-library/VariantAnnotation/Meta/vignette.rds application/gzip root:root 0o644 271 bytes
/usr/lib/R/site-library/VariantAnnotation/NAMESPACE text/plain root:root 0o644 3.2 KB
/usr/lib/R/site-library/VariantAnnotation/NEWS text/plain root:root 0o644 17.1 KB
/usr/lib/R/site-library/VariantAnnotation/R/ root:root 0o755
/usr/lib/R/site-library/VariantAnnotation/R/VariantAnnotation text/plain root:root 0o644 1.0 KB
/usr/lib/R/site-library/VariantAnnotation/R/VariantAnnotation.rdb application/octet-stream root:root 0o644 797.5 KB
/usr/lib/R/site-library/VariantAnnotation/R/VariantAnnotation.rdx application/gzip root:root 0o644 8.9 KB
/usr/lib/R/site-library/VariantAnnotation/doc/ root:root 0o755
/usr/lib/R/site-library/VariantAnnotation/doc/VariantAnnotation.R text/plain root:root 0o644 9.2 KB
/usr/lib/R/site-library/VariantAnnotation/doc/VariantAnnotation.Rnw text/x-tex root:root 0o644 20.6 KB
/usr/lib/R/site-library/VariantAnnotation/doc/VariantAnnotation.pdf application/pdf root:root 0o644 199.1 KB
/usr/lib/R/site-library/VariantAnnotation/doc/filterVcf.R text/plain root:root 0o644 3.0 KB
/usr/lib/R/site-library/VariantAnnotation/doc/filterVcf.Rnw text/x-tex root:root 0o644 12.3 KB
/usr/lib/R/site-library/VariantAnnotation/doc/filterVcf.pdf application/pdf root:root 0o644 172.5 KB
/usr/lib/R/site-library/VariantAnnotation/doc/index.html text/html root:root 0o644 2.0 KB
/usr/lib/R/site-library/VariantAnnotation/extdata/ root:root 0o755
/usr/lib/R/site-library/VariantAnnotation/extdata/chr22.vcf.gz application/gzip root:root 0o644 548.5 KB
/usr/lib/R/site-library/VariantAnnotation/extdata/chr22.vcf.gz.tbi application/gzip root:root 0o644 655 bytes
/usr/lib/R/site-library/VariantAnnotation/extdata/chr7-sub.vcf.gz application/gzip root:root 0o644 110.5 KB
/usr/lib/R/site-library/VariantAnnotation/extdata/chr7-sub.vcf.gz.tbi application/gzip root:root 0o644 744 bytes
/usr/lib/R/site-library/VariantAnnotation/extdata/ex2.vcf text/plain root:root 0o644 1.8 KB
/usr/lib/R/site-library/VariantAnnotation/extdata/gl_chr1.vcf text/plain root:root 0o644 24.2 KB
/usr/lib/R/site-library/VariantAnnotation/extdata/h1187-10k.vcf.gz application/gzip root:root 0o644 121.9 KB
/usr/lib/R/site-library/VariantAnnotation/extdata/h1187-10k.vcf.gz.tbi application/gzip root:root 0o644 441 bytes
/usr/lib/R/site-library/VariantAnnotation/extdata/hapmap_exome_chr22.vcf.gz application/gzip root:root 0o644 365.6 KB
/usr/lib/R/site-library/VariantAnnotation/extdata/hapmap_exome_chr22.vcf.gz.tbi application/gzip root:root 0o644 4.4 KB
/usr/lib/R/site-library/VariantAnnotation/extdata/structural.vcf text/plain root:root 0o644 3.0 KB
/usr/lib/R/site-library/VariantAnnotation/help/ root:root 0o755
/usr/lib/R/site-library/VariantAnnotation/help/AnIndex text/plain root:root 0o644 15.1 KB
/usr/lib/R/site-library/VariantAnnotation/help/VariantAnnotation.rdb application/octet-stream root:root 0o644 185.0 KB
/usr/lib/R/site-library/VariantAnnotation/help/VariantAnnotation.rdx application/gzip root:root 0o644 840 bytes
/usr/lib/R/site-library/VariantAnnotation/help/aliases.rds application/gzip root:root 0o644 2.9 KB
/usr/lib/R/site-library/VariantAnnotation/help/paths.rds application/gzip root:root 0o644 429 bytes
/usr/lib/R/site-library/VariantAnnotation/html/ root:root 0o755
/usr/lib/R/site-library/VariantAnnotation/html/00Index.html text/html root:root 0o644 35.9 KB
/usr/lib/R/site-library/VariantAnnotation/html/R.css text/plain root:root 0o644 1.3 KB
/usr/lib/R/site-library/VariantAnnotation/libs/ root:root 0o755
/usr/lib/R/site-library/VariantAnnotation/libs/VariantAnnotation.so application/x-sharedlib root:root 0o644 123.1 KB
/usr/lib/R/site-library/VariantAnnotation/scripts/ root:root 0o755
/usr/lib/R/site-library/VariantAnnotation/scripts/test_Rplinkseq.R text/plain root:root 0o644 10.7 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/ root:root 0o755
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/ root:root 0o755
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/FORMAT_header_no_SAMPLEs.vcf text/plain root:root 0o644 602 bytes
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/VarScan_header.vcf text/plain root:root 0o644 3.0 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/banded_gvcf.vcf text/plain root:root 0o644 3.6 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/expand.vcf text/plain root:root 0o644 1.8 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/fewer-FORMAT-than-GENO.vcf text/plain root:root 0o644 614 bytes
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/missing-FORMAT-metadata-elt.vcf text/plain root:root 0o644 553 bytes
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/mixedStructural.vcf text/plain root:root 0o644 2.9 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/multiple_INFO_fields.vcf text/plain root:root 0o644 439 bytes
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/negative_FORMAT_Number.vcf text/plain root:root 0o644 3.0 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/no_FORMAT_column.vcf text/plain root:root 0o644 287 bytes
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/no_GENO_row.vcf text/plain root:root 0o644 573 bytes
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/no_INFO_header.vcf text/plain root:root 0o644 300 bytes
/usr/lib/R/site-library/VariantAnnotation/unitTests/cases/unspecified_INFO_FORMAT_fields.vcf text/plain root:root 0o644 1.6 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_ScanVcfParam-class.R text/plain root:root 0o644 2.8 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_VCF-class.R text/plain root:root 0o644 9.4 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_VRanges-class.R text/plain root:root 0o644 10.7 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_expand-methods.R text/plain root:root 0o644 2.0 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_filterVcf.R text/plain root:root 0o644 4.9 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_genotypeToSnpMatrix.R text/plain root:root 0o644 7.6 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_isSNV.R text/plain root:root 0o644 3.7 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_readVcf-methods.R text/plain root:root 0o644 9.0 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_scanVcf.R text/plain root:root 0o644 4.3 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_snpSummary.R text/plain root:root 0o644 1.3 KB
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_summarizeVariants-methods.R text/plain root:root 0o644 635 bytes
/usr/lib/R/site-library/VariantAnnotation/unitTests/test_writeVcf-methods.R text/plain root:root 0o644 3.7 KB