This file is indexed.

/usr/lib/R/site-library/knitr/INDEX is in r-cran-knitr 1.17-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

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Sweave2knitr            Convert Sweave to knitr documents
all_labels              Get all chunk labels in a document
all_patterns            All built-in patterns
asis_output             Mark an R object with a special class
clean_cache             Clean cache files that are probably no longer
                        needed
combine_words           Combine multiple words into a single string
current_input           Query the current input filename
dep_auto                Build automatic dependencies among chunks
dep_prev                Make later chunks depend on previous chunks
engine_output           An output wrapper for language engine output
extract_raw_output      Mark character strings as raw output that
                        should not be converted
fig_chunk               Obtain the figure filenames for a chunk
fig_path                Path for figure files
hook_ffmpeg_html        Hooks to create animations in HTML output
hook_movecode           Some potentially useful document hooks
hook_pdfcrop            Built-in chunk hooks to extend knitr
hook_plot_html          Default plot hooks for different output formats
image_uri               Encode an image file to a data URI
imgur_upload            Upload an image to imgur.com
include_graphics        Embed external images in 'knitr' documents
include_url             Embed a URL as an HTML iframe or a screenshot
                        in 'knitr' documents
inline_expr             Wrap code using the inline R expression syntax
kable                   Create tables in LaTeX, HTML, Markdown and
                        reStructuredText
knit                    Knit a document
knit2html               Convert markdown to HTML using knit() and
                        markdownToHTML()
knit2pandoc             Convert various input files to various output
                        files using 'knit()' and Pandoc
knit2pdf                Convert Rnw or Rrst files to PDF using knit()
                        and texi2pdf() or rst2pdf()
knit2wp                 Knit an R Markdown document and post it to
                        WordPress
knit_child              Knit a child document
knit_engines            Engines of other languages
knit_exit               Exit knitting early
knit_expand             A simple macro preprocessor for templating
                        purposes
knit_filter             Spell check filter for source documents
knit_global             The global environment in which code chunks are
                        evaluated
knit_hooks              Hooks for R code chunks, inline R code and
                        output
knit_meta               Metadata about objects to be printed
knit_params             Extract knit parameters from a document
knit_params_yaml        Extract knit parameters from YAML text
knit_patterns           Patterns to match and extract R code in a
                        document
knit_print              A custom printing function
knit_rd                 Knit package documentation
knit_theme              Syntax highlighting themes
knit_watch              Watch an input file continuously and knit it
                        when it is updated
knitr-package           A general-purpose tool for dynamic report
                        generation in R
load_cache              Load the cache database of a code chunk
opts_chunk              Default and current chunk options
opts_hooks              Hooks for code chunk options
opts_knit               Options for the knitr package
opts_template           Template for creating reusable chunk options
pandoc                  A Pandoc wrapper to convert documents to other
                        formats
pat_rnw                 Set regular expressions to read input documents
plot_crop               Crop a plot (remove the edges) using PDFCrop or
                        ImageMagick
rand_seed               An unevaluated expression to return
                        .Random.seed if exists
read_chunk              Read chunks from an external script
read_rforge             Read source code from R-Forge
render_html             Set output hooks for different output formats
rocco                   Knit R Markdown using the classic Docco style
rst2pdf                 A wrapper for rst2pdf
set_alias               Set aliases for chunk options
set_header              Set the header information
set_parent              Specify the parent document of child documents
spin                    Spin goat's hair into wool
spin_child              Spin a child R script
stitch                  Automatically create a report based on an R
                        script and a template
vignette_engines        Package vignette engines
wrap_rmd                Wrap long lines in Rmd files
write_bib               Generate BibTeX bibliography databases for R
                        packages