/usr/lib/R/site-library/phylobase/NAMESPACE is in r-cran-phylobase 0.8.4-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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export("[")
export("edgeLabels<-")
export("edgeLength<-")
export("labels<-")
export("nodeData<-")
export("nodeLabels<-")
export("rootNode<-")
export("tdata<-")
export("tipData<-")
export("tipLabels<-")
export(MRCA)
export(addData)
export(ancestor)
export(ancestors)
export(checkPhylo4)
export(children)
export(depthTips)
export(descendants)
export(edgeId)
export(edgeLabels)
export(edgeLength)
export(edgeOrder)
export(edges)
export(extractTree)
export(getEdge)
export(getNode)
export(hasDuplicatedLabels)
export(hasEdgeLabels)
export(hasEdgeLength)
export(hasNodeData)
export(hasNodeLabels)
export(hasPoly)
export(hasRetic)
export(hasSingle)
export(hasTipData)
export(internalEdges)
export(isRooted)
export(isUltrametric)
export(nData)
export(nEdges)
export(nNodes)
export(nTips)
export(names)
export(nodeData)
export(nodeDepth)
export(nodeHeight)
export(nodeId)
export(nodeLabels)
export(nodeType)
export(phylo4)
export(phylo4d)
export(phyloXXYY)
export(phylobase.options)
export(phylobubbles)
export(plotOneTree)
export(prune)
export(readNCL)
export(readNewick)
export(readNexus)
export(rootNode)
export(shortestPath)
export(siblings)
export(sumEdgeLength)
export(tdata)
export(terminalEdges)
export(tip.data.plot)
export(tipData)
export(tipLabels)
export(treePlot)
exportClasses(phylo4)
exportClasses(phylo4d)
exportClasses(phylo4vcov)
exportMethods("[")
exportMethods(head)
exportMethods(labels)
exportMethods(names)
exportMethods(plot)
exportMethods(print)
exportMethods(reorder)
exportMethods(show)
exportMethods(subset)
exportMethods(summary)
exportMethods(tail)
import(RNeXML)
import(ape)
import(grid)
import(methods)
import(stats)
importFrom(Rcpp,evalCpp)
importFrom(ade4,newick2phylog)
importFrom(graphics,plot)
importFrom(rncl,rncl)
importFrom(utils,head)
importFrom(utils,tail)
useDynLib(phylobase, .registration = TRUE)
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