This file is indexed.

/usr/share/applications/nautilus.desktop is in nautilus 1:3.4.1-0ubuntu1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

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[Desktop Entry]
Name=Files
Comment=Access and organize files
Exec=nautilus %U
Icon=system-file-manager
Terminal=false
Type=Application
StartupNotify=true
OnlyShowIn=GNOME;Unity;
Categories=GNOME;GTK;Utility;Core;
MimeType=inode/directory;application/x-gnome-saved-search;
X-GNOME-Bugzilla-Bugzilla=GNOME
X-GNOME-Bugzilla-Product=nautilus
X-GNOME-Bugzilla-Component=general
X-GNOME-Bugzilla-Version=3.4.1
Actions=Window;
X-Ubuntu-Gettext-Domain=nautilus

[Desktop Action Window]
Name=Open a New Window
Exec=nautilus
OnlyShowIn=Unity;