This file is indexed.

/usr/share/tcltk/tcllib1.14/simulation/montecarlo.tcl is in tcllib 1.14-dfsg-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
# montecarlo.tcl --
#     Utilities for Monte Carlo simulations
#
# Copyright (c) 2007 by Arjen Markus <arjenmarkus@users.sourceforge.net>
#
# See the file "license.terms" for information on usage and redistribution
# of this file, and for a DISCLAIMER OF ALL WARRANTIES.
#
# RCS: @(#) $Id: montecarlo.tcl,v 1.2 2008/01/23 05:35:02 arjenmarkus Exp $
#------------------------------------------------------------------------------

package require Tcl 8.4
package require simulation::random
package require math::statistics

# ::simulation::montecarlo --
#     Create the namespace
#
namespace eval ::simulation::montecarlo {
}


# AcceptAll --
#     Accept any point
#
# Arguments:
#     args            Coordinates
#     y               Y-coordinate
#
proc ::simulation::montecarlo::AcceptAll {args} {
    return 1
}


# integral2D --
#     Estimate an integral over a two-dimensional domain, using MC
#
# Arguments:
#     domain          List of minimum x, maximum x, minimum y and maximum y
#     func            Function to be integrated
#     args            Option-value pairs:
#                     -region proc  - accept or reject the chosen point
#                     -samples n    - number of samples to use
# Result:
#     Estimated value of the integral
#
proc ::simulation::montecarlo::integral2D {domain func args} {
    set option(-region)  AcceptAll
    set option(-samples) 1000

    foreach {key value} $args {
        if { [string index $key 0] != "-" } {
            return -code error "Incorrect option: $key - should start with a -"
        }
        set option($key) $value
    }

    set sum      0.0
    set count    0
    set accepted 0
    set maxcount [expr {10*$option(-samples)}]

    foreach {xmin xmax ymin ymax} $domain {break}
    set area [expr {($xmax-$xmin)*($ymax-$ymin)}]

    while { $accepted < $option(-samples) && $count < $maxcount } {
        set x [expr {$xmin + ($xmax-$xmin)*rand()}]
        set y [expr {$ymin + ($ymax-$ymin)*rand()}]

        if { [$option(-region) $x $y] } {
            set sum [expr {$sum + [$func $x $y]}]
            incr accepted
        }
        incr count
    }

    #
    # The ratio accepted/count gives an estimate of the area
    # over which we just integrated.
    #
    return [expr {$accepted*$sum/$count/$count*$area}]
}


# integral3D --
#     Estimate an integral over a three-dimensional domain, using MC
#
# Arguments:
#     domain          List of minimum x, maximum x, minimum y and maximum y,
#                     minimum z, maximum z
#     func            Function to be integrated
#     args            Option-value pairs:
#                     -region proc  - accept or reject the chosen point
#                     -samples n    - number of samples to use
# Result:
#     Estimated value of the integral
#
proc ::simulation::montecarlo::integral3D {domain func args} {
    set option(-region)  AcceptAll
    set option(-samples) 1000

    foreach {key value} $args {
        if { [string index $key 0] != "-" } {
            return -code error "Incorrect option: $key - should start with a -"
        }
        set option($key) $value
    }

    set sum      0.0
    set count    0
    set accepted 0
    set maxcount [expr {10*$option(-samples)}]

    foreach {xmin xmax ymin ymax zmin zmax} $domain {break}
    set area [expr {($xmax-$xmin)*($ymax-$ymin)*($zmax-$zmin)}]

    while { $accepted < $option(-samples) && $count < $maxcount } {
        set x [expr {$xmin + ($xmax-$xmin)*rand()}]
        set y [expr {$ymin + ($ymax-$ymin)*rand()}]
        set z [expr {$zmin + ($zmax-$zmin)*rand()}]

        if { [$option(-region) $x $y $z] } {
            set sum [expr {$sum + [$func $x $y $z]}]
            incr accepted
        }
        incr count
    }

    #
    # The ratio accepted/count gives an estimate of the area
    # over which we just integrated.
    #
    return [expr {$accepted*$sum/$count/$count*$area}]
}


# singleExperiment --
#     Perform a single MC experiment
#
# Arguments:
#     args            Option-value pairs, predefined options:
#                     -init body      - code to initialise the experiment
#                     -loop body      - code to be run for each trial
#                     -final body     - code to finalise the experiment
#                     -trials n       - number of trials
#                     -reportfile f   - channel to report file
#                     -verbose yesno  - whether to report the details or not
#                     -analysis type  - type of analysis to perform
#                                       (standard, none or the name of a procedure)
#                     -columns names  - list of names of the columns (for printing)
#                     All option-value pairs are available via
#                     the procedure getOption
#
# Result:
#     Whatever was set via [setExpResult]
#
proc ::simulation::montecarlo::singleExperiment {args} {
    variable exp_option
    variable exp_result
    variable trial_result
    variable trial_first

    catch {unset exp_option}
    set exp_option(-init)       {}
    set exp_option(-loop)       {}
    set exp_option(-final)      {}
    set exp_option(-trials)     {}
    set exp_option(-reportfile) stdout
    set exp_option(-verbose)    0
    set exp_option(-analysis)   standard
    set exp_option(-columns)    {}

    set exp_result   {}
    set trial_result {}

    #
    # Sanity check for the options, and store them
    #
    foreach {key value} $args {
        if { [string index $key 0] != "-" } {
            return -code error "Incorrect option: $key - should start with a -"
        }
        set exp_option($key) $value
    }

    #
    # Which analysis procedure
    #
    switch -- $exp_option(-analysis) {
        "standard" { set exp_option(-analysis) ::simulation::montecarlo::StandardAnalysis }
        "none"     { set exp_option(-analysis) "" }
    }

    #
    # Now construct the temporary procedure that will do the work
    #
    proc DoExperiment {} [string map \
        [list INIT $exp_option(-init) LOOP $exp_option(-loop) \
              FINAL $exp_option(-final) TRIALS $exp_option(-trials) \
              VERBOSE $exp_option(-verbose) \
              ANALYSIS $exp_option(-analysis)] \
        {
            INIT
            for { set trial 0 } { $trial < TRIALS } { incr trial } {
                LOOP
                if { VERBOSE } {
                    ::simulation::montecarlo::PrintTrialResult $trial
                }
            }
            FINAL
            ANALYSIS
        }]
        # TODO: analysis of all trial results

    #
    # Do the experiment and remove it. The results
    #
    DoExperiment
    rename DoExperiment {}

    return $exp_result
}


# transposeData --
#     Transpose a matrix of data
#
# Arguments:
#     values          List of lists of values
#
# Result:
#     Transposed list
#
proc ::simulation::montecarlo::transposeData {values} {
    set transpose {}
    set c 0
    foreach col [lindex $values 0] {
        set newrow {}
        foreach row $values {
            lappend newrow [lindex $row $c]
        }
        lappend transpose $newrow
        incr c
    }
    return $transpose
}


# setTrialResult --
#     Set the result of an individual trial
#
# Arguments:
#     values          List of values to be stored
#
# Result:
#     None
#
proc ::simulation::montecarlo::setTrialResult {values} {

    lappend ::simulation::montecarlo::trial_result $values
}


# PrintTrialResult --
#     Print the result of the current trial
#
# Arguments:
#     trial            Trial number
#
# Result:
#     None
#
proc ::simulation::montecarlo::PrintTrialResult {trial} {

    set outfile [getOption reportfile]

    #
    # Print the column names
    #
    if { $trial == 0 } {
        set columns [getOption columns]
        set format "%5.5s [string repeat %12.12s [llength $columns]]"

        puts $outfile [eval format [list $format] [list " "] $columns]
    }

    #
    # Print the results
    #
    set result [lindex $::simulation::montecarlo::trial_result end]

    set format "%5d:[string repeat %12g [llength $result]]"

    puts $outfile [eval format $format $trial $result]
}


# setExpResult --
#     Set the result for the complete experiment
#
# Arguments:
#     values          List of values to be stored
#
# Result:
#     None
#
proc ::simulation::montecarlo::setExpResult {values} {

    set ::simulation::montecarlo::exp_result $values
}


# getExpResult --
#     Return the result of the complete experiment
#
# Arguments:
#     None
# Result:
#     Whatever was set via setExpResult
#
proc ::simulation::montecarlo::getExpResult {} {

    return $::simulation::montecarlo::exp_result
}


# getTrialResults --
#     Return the list of individual results for all trials
#
# Arguments:
#     None
# Result:
#     Whatever was set via setTrialResult
#
proc ::simulation::montecarlo::getTrialResults {} {

    return $::simulation::montecarlo::trial_result
}


# getOption --
#     Return the value of an option
#
# Arguments:
#     option         Name of the option (without -)
# Result:
#     The value or an error message if it does not exist
#
proc ::simulation::montecarlo::getOption {option} {
    variable exp_option

    if { [info exists exp_option(-$option)] } {
        return $exp_option(-$option)
    } else {
        return -code error "No such option: $option"
    }
}


# hasOption --
#     Check if the option is available
#
# Arguments:
#     option         Name of the option (without -)
# Result:
#     1 if it is available, 0 if not
#
proc ::simulation::montecarlo::hasOption {option} {
    variable exp_option

    if { [info exists exp_option(-$option)] } {
        return 1
    } else {
        return 0
    }
}


# StandardAnalysis --
#     Perform standard analysis on the trial data
#
# Arguments:
#     None
# Result:
#     None
# Side effects:
#     Prints the results to the result file and stores them as
#     the experiment results.
#
proc ::simulation::montecarlo::StandardAnalysis {} {

    set repfile [getOption reportfile]
    set names   [getOption columns]

    set values [transposeData [getTrialResults]]

    set exp_result {}

    #
    # First part: basic statistics
    #
    set part_one {}

    puts $repfile "Basic statistical parameters:"
    set form "%12.12s[string repeat %12g 4]"
    puts $repfile [format [string repeat "%12.12s" 5] "" Mean Stdev Min Max]

    foreach row $values name $names {
        set basicStats [::math::statistics::basic-stats $row]
        lappend part_one $basicStats

        puts $repfile [format $form $name \
            [lindex $basicStats 0] \
            [lindex $basicStats 4] \
            [lindex $basicStats 1] \
            [lindex $basicStats 2]]
    }

    #
    # Second part: correlation matrix
    #
    set form "%12.12s[string repeat %12g [llength $values]]"

    puts $repfile "Correlation matrix:"
    puts $repfile [eval format "%12.12s[string repeat %12.12s [llength $values]]" [list ""] $names]

    set part_two {}
    foreach row $values rowname $names {
        set line {}

        foreach col $values {
            set corr [::math::statistics::corr $col $row]
            lappend line $corr
        }
        lappend part_two $line
        puts $repfile [eval format $form $rowname $line]
    }

    setExpResult [list $part_one $part_two]
}

# Announce the package
#
package provide simulation::montecarlo 0.1

# main --
#     Quick test
#
if { 0 } {
proc f {x y} {
    return $x
}
puts "Integral over rectangle: [::simulation::montecarlo::integral2D {0 1 0 1} f]"
puts [time {
set a [::simulation::montecarlo::integral2D {0 1 0 1} f]
} 100]

#
# MC experiments:
# Determine the mean and median of a set of points and compare them
#
::simulation::montecarlo::singleExperiment -init {
    package require math::statistics

    set prng [::simulation::random::prng_Normal 0.0 1.0]
} -loop {
    set numbers {}
    for { set i 0 } { $i < [getOption samples] } { incr i } {
        lappend numbers [$prng]
    }
    set mean   [::math::statistics::mean $numbers]
    set median [::math::statistics::median $numbers] ;# ? Exists?
    setTrialResult [list $mean $median]
} -final {
    set result [getTrialResults]
    set means   {}
    set medians {}
    foreach r $result {
        foreach {m M} $r break
        lappend means   $m
        lappend medians $M
    }
    puts [getOption reportfile] "Correlation: [::math::statistics::corr $means $medians]"

} -trials 100 -samples 10 -verbose 1 -columns {Mean Median}
}