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/usr/share/doc/cd-hit/copyright is in cd-hit 4.5.7-1.

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The actual contents of the file can be viewed below.

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Format: http://dep.debian.net/deps/dep5/
Upstream-Name: CD-HIT
Upstream-Contact: Weizhong Li <liwz@sdsc.edu>
Source: http://code.google.com/p/cdhit/downloads/list

Files: *
Copyright: © 2009-2011 Weizhong Li <liwz@sdsc.edu>
License: GPL-2

Files: cdhit-user-guide.pdf
Copyright: © 2009-2011 Weizhong Li <liwz@sdsc.edu>
License: GPL-2
Comment: LaTeX source for documentation will be included in future release
 The author provided the source for the documentation in an archive sended
 in CC to the Debian Med mailing list.  The content is stored in the source
 package in debian/doc-source for the moment.
 .
 Date: Wed, 21 Dec 2011 14:23:00 -0800
 From: Weizhong Li <liwz@sdsc.edu>
 To: Andreas Tille <andreas@an3as.eu>
 CC: Debian Med Project List <debian-med@lists.debian.org>
 Subject: Re: Packaging of cd-hit for Debian
 .
 Andreas,
 The attached is the LaTex source. This is not currently included in the
 cd-hit release yet. But in the future, we consider to have the LaTex
 file packaged into cd-hit release.
 Thanks a lot, let me know if anything is needed.
 Weizhong

License: GPL-2
 This program is free software: you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
 the Free Software Foundation, either version 2 of the License, or
 (at your option) any later version.
 .
 This program is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of
 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 GNU General Public License for more details.
 .
 You should have received a copy of the GNU General Public License
 along with this program.  If not, see <http://www.gnu.org/licenses/>.
 .
 On Debian systems, the full text of the GNU General Public License version 2
 can be found in the file `/usr/share/common-licenses/GPL-2'.

Files: debian/*
Copyright: © 2011 Andreas Tille <tille@debian.org>
License: Same as cd-hit itself (GPL-2)
 On Debian systems, the full text of the GNU General Public License version 2
 can be found in the file `/usr/share/common-licenses/GPL-2'.