This file is indexed.

/usr/include/BoxLib/PArray.H is in libbox-dev 2.5-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
/*
** (c) 1996-2000 The Regents of the University of California (through
** E.O. Lawrence Berkeley National Laboratory), subject to approval by
** the U.S. Department of Energy.  Your use of this software is under
** license -- the license agreement is attached and included in the
** directory as license.txt or you may contact Berkeley Lab's Technology
** Transfer Department at TTD@lbl.gov.  NOTICE OF U.S. GOVERNMENT RIGHTS.
** The Software was developed under funding from the U.S. Government
** which consequently retains certain rights as follows: the
** U.S. Government has been granted for itself and others acting on its
** behalf a paid-up, nonexclusive, irrevocable, worldwide license in the
** Software to reproduce, prepare derivative works, and perform publicly
** and display publicly.  Beginning five (5) years after the date
** permission to assert copyright is obtained from the U.S. Department of
** Energy, and subject to any subsequent five (5) year renewals, the
** U.S. Government is granted for itself and others acting on its behalf
** a paid-up, nonexclusive, irrevocable, worldwide license in the
** Software to reproduce, prepare derivative works, distribute copies to
** the public, perform publicly and display publicly, and to permit
** others to do so.
*/

#ifndef BL_PARRAY_H
#define BL_PARRAY_H
//
// $Id: PArray.H,v 1.24 2002/11/12 20:49:35 lijewski Exp $
//
#include <Array.H>

//
//@Man:
//@Memo:
/*@Doc: An enum that controls whether or not class PArray<T>
         manages the pointed to objects, as well as the pointer itself.
         Valid values are PArrayNoManage and PArrayManage.
*/

enum PArrayPolicy
{
    PArrayNoManage = 0,
    PArrayManage   = 1
};

//
//@Man:
//@Memo: An Array of Pointers to Objects of Type T
/*@Doc:

  The PArray<T> class is similar to the Array<T> class except that it
  implements an array of pointers to objects of type T rather than an array
  of the objects themselves.  As with Array<T> objects, PArray<T> objects
  know about their length, can be dynamically resized and have built-in
  automatic bounds checking.

  When a PArray<T> object is destructed, should only the pointers be
  destructed or should the objects to which they point also be deleted?
  The PArray<T> class allows for both scenarios.  By default, it will
  only remove the pointers.  If the array is constructed with the
  PArrayManage argument it will also delete all the objects pointed to
  in the array.

  This is a concrete class, not a polymorphic one.

  PArray<T>s do NOT provide a copy constructor or an assignment operator.
*/

template <class T>
class PArray
{
public:

    /*@ManDoc: Constructs a PArray<T> with no elements.  The default memory
               management policy is not to delete the underlying objects
               upon destruction.
    */
    explicit PArray (PArrayPolicy _managed = PArrayNoManage);

    /*@ManDoc: Constructs a PArray<T> of length len of null pointers.  
               The default memory management policy is not to delete the
               underlying objects upon destruction.
    */
    explicit PArray (int          len,
                     PArrayPolicy _managed = PArrayNoManage);

    /*@ManDoc: The destructor.  If the memory management policy was
               set to Manage upon construction, this destructor will
               also delete all objects referenced by the pointers in
               this array.
    */
    ~PArray ();
    //
    //@ManDoc: Returns true if the i'th element is not the null pointer.
    //
    bool defined (int i) const;

    /*@ManDoc: Returns a constant reference to the object pointed to by the
               i'th element in this PArray<T>.  Performs bounds checking
               when the library is compiled in debug mode.
    */
    const T& operator[] (int i) const;

    /*@ManDoc: Returns a reference to the object pointed to by the
               i'th element in this PArray<T>.  Performs bounds checking
               when the library is compiled in debug mode.
    */
    T& operator[] (int i);

    /*@ManDoc: Returns a constant reference to the object pointed to by the
               i'th element in the PArray.  It is an error if the i'th element
               is the null pointer.
    */
    const T& get (int i) const;

    /*@ManDoc: Returns a reference to the object pointed to by the i'th
               element in the PArray.  It is an error if the i'th element
               is the null pointer.
    */
    T& get (int i);

    /*@ManDoc: Defines the i'th element of this PArray<T> to the pointer
               value elem.  It is an error if the i'th element previously
               had a value.
    */
    void set (int i,
              T*  elem);
    //
    //@ManDoc: Returns the number of elements.
    //
    int size () const;

    /*@ManDoc: This function sets each pointer in this PArray<T> to null.
               If the memory management policy was set to Manage
               upon construction, this function will also delete all objects
               referenced by the pointers in this array.
    */
    void clear ();

    /*@ManDoc: The i'th element in this PArray<T> is set to null.
               If the memory management policy was set to Manage
               upon construction, this function will also delete the object
               referenced by that pointer.
    */
    void clear (int i);

    /*@ManDoc: This function changes the size of the array to newsize
               while preserving the value of as many array elements as
               possible.  If newsize is greater than the current length,
               the array is grown and the new elements are null pointers.
               If newsize is less than the current length the array is
               cropped with the remaining elements retaining their
               original pointer values. If the memory management policy
               was set to Manage, any cropped pointers are deleted.
    */
    void resize (int newsize);

    /*@ManDoc: This function does a resize and changes the PArrayPolicy.
	       (Especially for arrays of PArray where the user wants
	       the default policy to be managed--the default constructor
	       makes the default unmanaged).  If the new managed policy is
               different from the old one, none of the elements of the
               original are retained.
    */
    void resize (int          newsize,
                 PArrayPolicy newmanagedpolicy);

    /*@ManDoc: Removes the i'th element from the PArray and returns the
               pointer to the calling function.  Nulls out the pointer
               in the PArray<T>.
    */
    T* remove (int i);

protected:
    //
    // The underlying representation.
    //
    Array<void*> vp;
    //
    // The memory management policy.
    //
    PArrayPolicy managed;

public:
    //
    // Disallow these. FIXME
    //
    PArray (const PArray<T>&);
    // PArray<T> operator= (const PArray<T>&);
};

template <class T>
PArray<T>::PArray (const PArray<T>& c)
{
    BL_ASSERT(c.size()==0);

    managed = c.managed;
}

template <class T>
PArray<T>::PArray (PArrayPolicy _managed)
    :
    managed(_managed)
{}

template <class T>
inline
bool
PArray<T>::defined (int i) const
{
    return vp[i] != 0;
}

template <class T>
inline
const T&
PArray<T>::operator[] (int i) const
{
    BL_ASSERT(vp[i] != 0);
    return *((T*)(vp[i]));
}

template <class T>
inline
T&
PArray<T>::operator[] (int i)
{
    BL_ASSERT(vp[i] != 0);
    return *((T*)(vp[i]));
}

template <class T>
inline
const T&
PArray<T>::get (int i) const
{
    BL_ASSERT(vp[i] != 0);
    return *((T*)(vp[i]));
}

template <class T>
inline
T&
PArray<T>::get (int i)
{
    BL_ASSERT(vp[i] != 0);
    return *((T*)(vp[i]));
}

template <class T>
inline
void
PArray<T>::set (int i,
                T*  elem)
{
    BL_ASSERT(vp[i] == 0);
    vp[i] = elem;
}

template <class T>
inline
int
PArray<T>::size () const
{
    return vp.size();
}

template <class T>
T*
PArray<T>::remove (int i)
{
    BL_ASSERT(vp[i] != 0);
    void* tmp = vp[i];
    vp[i]     = 0;
    return (T*) tmp;
}

template <class T>
void
PArray<T>::clear (int n)
{
    if (managed)
        delete ((T*)(vp[n]));
    vp[n] = 0;
}

template <class T>
PArray<T>::PArray (int          len,
                   PArrayPolicy _managed)
    :
    vp(len),
    managed(_managed)
{
    for (int i = 0; i < size(); i++)
        vp[i] = 0;
}

template <class T>
void
PArray<T>::clear ()
{
    if (managed)
    {
        for (int i = 0; i < size(); ++i)
        {
            delete ((T*)(vp[i]));
        }
    }
    for (int i = 0; i < size(); ++i)
        vp[i] = 0;
}

template <class T>
PArray<T>::~PArray ()
{
    clear();
}

template <class T>
void
PArray<T>::resize (int newlen)
{
    void** ovp = vp.size() ? &vp[0] : 0;

    int oldlen = vp.size();

    vp.resize(newlen);

    for (int i = oldlen; i < newlen; ++i)
        vp[i] = 0;

    if (managed)
    {
        for (int i = newlen; i < oldlen; i++)
        {
            delete ((T*)(ovp[i]));
            ovp[i]  = 0;
        }
    }
}

template <class T>
void
PArray<T>::resize (int          newlen,
                   PArrayPolicy newmanagedpolicy)
{
    if (newmanagedpolicy == managed)
    {
        resize(newlen);
    }
    else
    {
        clear();
        resize(newlen);
        managed = newmanagedpolicy;
    }
}

#endif /*BL_PARRAY_H*/