/usr/include/dolfin/la/MTL4Matrix.h is in libdolfin1.0-dev 1.0.0-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 | // Copyright (C) 2008 Dag Lindbo
//
// This file is part of DOLFIN.
//
// DOLFIN is free software: you can redistribute it and/or modify
// it under the terms of the GNU Lesser General Public License as published by
// the Free Software Foundation, either version 3 of the License, or
// (at your option) any later version.
//
// DOLFIN is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
// GNU Lesser General Public License for more details.
//
// You should have received a copy of the GNU Lesser General Public License
// along with DOLFIN. If not, see <http://www.gnu.org/licenses/>.
//
// Modified by Garth N. Wells, 2008, 2009.
//
// First added: 2008-07-06
// Last changed: 2009-09-08
#ifdef HAS_MTL4
#ifndef __MTL4_MATRIX_H
#define __MTL4_MATRIX_H
#include <utility>
#include <boost/tuple/tuple.hpp>
#include "GenericMatrix.h"
#include "mtl4.h"
// Developers note:
//
// This class implements a minimal backend for MTL4.
//
// There are certain inline decisions that have been deferred.
// Due to the extensive calling of this backend through the generic LA
// interface, it is not clear where inlining will be possible and
// improve performance.
namespace dolfin
{
class MTL4Matrix: public GenericMatrix
{
public:
/// Create empty matrix
MTL4Matrix();
/// Copy constuctor
MTL4Matrix(const MTL4Matrix& A);
/// Destructor
virtual ~MTL4Matrix();
//--- Implementation of the GenericTensor interface ---
/// Return true if matrix is distributed
virtual bool distributed() const
{ return false; }
/// Initialize zero tensor using sparsity pattern
virtual void init(const GenericSparsityPattern& sparsity_pattern);
/// Return copy of tensor
virtual MTL4Matrix* copy() const;
/// Return size of given dimension
virtual uint size(uint dim) const;
/// Return local ownership range
virtual std::pair<uint, uint> local_range(uint dim) const
{ return std::make_pair(0, size(dim)); }
/// Set all entries to zero and keep any sparse structure
virtual void zero();
/// Finalize assembly of tensor
virtual void apply(std::string mode);
/// Return informal string representation (pretty-print)
virtual std::string str(bool verbose) const;
//--- Implementation of the GenericMatrix interface ---
/// Resize matrix to M x N
virtual void resize(uint M, uint N);
/// Resize vector y such that is it compatible with matrix for
/// multuplication Ax = b (dim = 0 -> b, dim = 1 -> x) In parallel
/// case, size and layout are important.
virtual void resize(GenericVector& y, uint dim) const;
/// Get block of values
virtual void get(double* block, uint m, const uint* rows, uint n, const uint* cols) const;
/// Set block of values
virtual void set(const double* block, uint m, const uint* rows, uint n, const uint* cols);
/// Add block of values
virtual void add(const double* block, uint m, const uint* rows, uint n, const uint* cols);
/// Add multiple of given matrix (AXPY operation)
virtual void axpy(double a, const GenericMatrix& A, bool same_nonzero_pattern);
/// Return norm of matrix
virtual double norm(std::string norm_type) const;
/// Get non-zero values of given row
virtual void getrow(uint row, std::vector<uint>& columns, std::vector<double>& values) const;
/// Set values for given row
virtual void setrow(uint row, const std::vector<uint>& columns, const std::vector<double>& values);
/// Set given rows to zero
virtual void zero(uint m, const uint* rows);
/// Set given rows to identity matrix
virtual void ident(uint m, const uint* rows);
// Matrix-vector product, y = Ax
virtual void mult(const GenericVector& x, GenericVector& y) const;
// Matrix-vector product, y = A^T x
virtual void transpmult(const GenericVector& x, GenericVector& y) const;
/// Multiply matrix by given number
virtual const MTL4Matrix& operator*= (double a);
/// Divide matrix by given number
virtual const MTL4Matrix& operator/= (double a);
/// Assignment operator
virtual const GenericMatrix& operator= (const GenericMatrix& A);
/// Return pointers to underlying compresssed storage data
/// See GenericMatrix for documentation.
virtual boost::tuples::tuple<const std::size_t*, const std::size_t*, const double*, int> data() const;
//--- Special functions ---
virtual LinearAlgebraFactory& factory() const;
//--- Special MTL4 functions ---
/// Create M x N matrix with estimate of nonzeroes per row
MTL4Matrix(uint M, uint N, uint nz);
/// Return mtl4_sparse_matrix reference
const mtl4_sparse_matrix& mat() const;
mtl4_sparse_matrix& mat();
/// Assignment operator
const MTL4Matrix& operator= (const MTL4Matrix& A);
private:
void init_inserter(uint nnz);
void dolfin_assert_no_inserter() const;
// MTL4 matrix object
mtl4_sparse_matrix A;
// MTL4 matrix inserter
mtl::matrix::inserter<mtl4_sparse_matrix, mtl::update_plus<double> >* ins;
uint nnz_row;
};
}
#endif
#endif
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