This file is indexed.

/usr/share/doc/libevocosm-dev/html/a00003.html is in libevocosm-dev 3.1.0-3.1ubuntu1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN">
<html><head><meta http-equiv="Content-Type" content="text/html;charset=iso-8859-1">
<title>Evocosm</title>
<link href="doxygen.css" rel="stylesheet" type="text/css">
</head><body bgcolor="#ffffff">
<h1 align="center" color="#606080">
Evocosm - A C++ Framework for Evolutionary Computing
</h1>
<h2 align="center"><a href="index.html">Main Index</a></h2>
<p align="center">
Created by <a href="mailto:scott.ladd@@coyotegulch.com?subject=libevocosm">Scott Robert Ladd</a> at
<a href="http://www.coyotegulch.com">Coyote Gulch Productions</a>.
</p>
<hr>
<!-- Generated by Doxygen 1.7.4 -->
  <div id="nav-path" class="navpath">
    <ul>
      <li class="navelem"><a class="el" href="a00051.html">libevocosm</a>      </li>
      <li class="navelem"><a class="el" href="a00003.html">evoreal</a>      </li>
    </ul>
  </div>
</div>
<div class="header">
  <div class="summary">
<a href="#pub-methods">Public Member Functions</a>  </div>
  <div class="headertitle">
<div class="title">libevocosm::evoreal Class Reference</div>  </div>
</div>
<div class="contents">
<!-- doxytag: class="libevocosm::evoreal" --><!-- doxytag: inherits="libevocosm::globals" -->
<p>Tools for evolving real numbers.  
 <a href="a00003.html#details">More...</a></p>

<p><code>#include &lt;<a class="el" href="a00037_source.html">evoreal.h</a>&gt;</code></p>
<div class="dynheader">
Inheritance diagram for libevocosm::evoreal:</div>
<div class="dyncontent">
 <div class="center">
  <img src="a00003.png" usemap="#libevocosm::evoreal_map" alt=""/>
  <map id="libevocosm::evoreal_map" name="libevocosm::evoreal_map">
<area href="a00008.html" title="Elements shared by all classes in Evocosm." alt="libevocosm::globals" shape="rect" coords="0,0,124,24"/>
</map>
 </div></div>

<p><a href="a00060.html">List of all members.</a></p>
<h2><a name="pub-methods"></a>
Public Member Functions</h2>
<ul>
<li><a class="el" href="a00003.html#a5a73ebc1646d6ff0eaf9209c61122e68">evoreal</a> (float a_sign_weight=5.0F, float a_exponent_weight=5.0F, float a_mantissa_weight=90.0F)
<dl class="el"><dd class="mdescRight">Creation constructor.  <a href="#a5a73ebc1646d6ff0eaf9209c61122e68"></a><br/></dl><li><a class="el" href="a00003.html#a231271cb08c7ac7b317b66955ef44582">evoreal</a> (<a class="el" href="a00003.html">evoreal</a> &amp;a_source)
<dl class="el"><dd class="mdescRight">Copy constructor.  <a href="#a231271cb08c7ac7b317b66955ef44582"></a><br/></dl><li><a class="el" href="a00003.html">evoreal</a> &amp; <a class="el" href="a00003.html#acb43516f7a6560f08f4553d97a210d41">operator=</a> (<a class="el" href="a00003.html">evoreal</a> &amp;a_source)
<dl class="el"><dd class="mdescRight">Assignment.  <a href="#acb43516f7a6560f08f4553d97a210d41"></a><br/></dl><li>float <a class="el" href="a00003.html#a4868f130ce3e90d3ccd19b33d3d3631f">mutate</a> (float a_f)
<dl class="el"><dd class="mdescRight">Mutation for <b>float</b> values.  <a href="#a4868f130ce3e90d3ccd19b33d3d3631f"></a><br/></dl><li>double <a class="el" href="a00003.html#a8b8d17b69a3af3b808e56bc37f8d974e">mutate</a> (double a_d)
<dl class="el"><dd class="mdescRight">Mutation for <b>double</b> values.  <a href="#a8b8d17b69a3af3b808e56bc37f8d974e"></a><br/></dl><li>float <a class="el" href="a00003.html#ae262cab3a9f1620404f51e7c985d6963">crossover</a> (float a_f1, float a_f2)
<dl class="el"><dd class="mdescRight">Crossover for <b>float</b> values.  <a href="#ae262cab3a9f1620404f51e7c985d6963"></a><br/></dl><li>double <a class="el" href="a00003.html#a03dcd90a97ad0407a1f56a065aabe04a">crossover</a> (double a_d1, double a_d2)
<dl class="el"><dd class="mdescRight">Crossover for <b>double</b> values.  <a href="#a03dcd90a97ad0407a1f56a065aabe04a"></a><br/></dl></ul>
<hr/><a name="details" id="details"></a><h2>Detailed Description</h2>
<div class="textblock"><p>The majority of genetic algorithms work on pure bit strings, converting those strings to the desired types for fitness testing. In Lawrence Davis' book "Handbook of Genetic Algorithms," he transforms a 44-bit string into two floating point values via a series of operations. I've seen similar techniques elsewhere, and I find them a bit cumbersome. </p>
<p>In the purest sense, a GA should have no knowledge of the format of the data it is modifying; however, natural chromosomes do encode some structure in their sequence; for example, crossover appears to take place in specific positions along the chromosome. And while mutation doesn't care about a chromosome's structure, it does affect that structure. In context of a computer program, the structure of a chromosome isn't so important as the ability to logically modify its bits through crossover and mutation. </p>
<p>I built tools for the mutation and crossover of encoded floating-point values of types <b>float</b> and <b>double</b>. The code that follows assumes we are working with 32-bit floats and 64-bit IEEE-754 doubles, which, in my experience, the norm for many C and C++ compilers. Yes, I'm aware of the VAX and other systems; this code is explicitly non-portable outside implementations of IEC 60559/IEEE-754. </p>
</div><hr/><h2>Constructor &amp; Destructor Documentation</h2>
<a class="anchor" id="a5a73ebc1646d6ff0eaf9209c61122e68"></a><!-- doxytag: member="libevocosm::evoreal::evoreal" ref="a5a73ebc1646d6ff0eaf9209c61122e68" args="(float a_sign_weight=5.0F, float a_exponent_weight=5.0F, float a_mantissa_weight=90.0F)" -->
<div class="memitem">
<div class="memproto">
      <table class="memname">
        <tr>
          <td class="memname">libevocosm::evoreal::evoreal </td>
          <td>(</td>
          <td class="paramtype">float&#160;</td>
          <td class="paramname"><em>a_sign_weight</em> = <code>5.0F</code>, </td>
        </tr>
        <tr>
          <td class="paramkey"></td>
          <td></td>
          <td class="paramtype">float&#160;</td>
          <td class="paramname"><em>a_exponent_weight</em> = <code>5.0F</code>, </td>
        </tr>
        <tr>
          <td class="paramkey"></td>
          <td></td>
          <td class="paramtype">float&#160;</td>
          <td class="paramname"><em>a_mantissa_weight</em> = <code>90.0F</code>&#160;</td>
        </tr>
        <tr>
          <td></td>
          <td>)</td>
          <td></td><td></td>
        </tr>
      </table>
</div>
<div class="memdoc">
<p>Creates a new evoreal object based on a set of weights that define the chance of mutation in various components of a floating-point value. The default weights have worked well in a variety of applications, but are (of course) settable for specific application and experimentation. </p>
<p>Each weight is a percentage of the total of all three weights; for example, if the three weights add to 100 (as they do by efault), and a_sign_weight is 12, the chance of a mutation in the sign bit is 12%. The default weights were chosen based on experience in using these tools in a variety of applications. </p>
<dl><dt><b>Parameters:</b></dt><dd>
  <table class="params">
    <tr><td class="paramname">a_sign_weight</td><td>- Weight assigned to changes in sign </td></tr>
    <tr><td class="paramname">a_exponent_weight</td><td>- Weight assigned to changes in the exponent </td></tr>
    <tr><td class="paramname">a_mantissa_weight</td><td>- Weight assigned to changes in the mantissa </td></tr>
  </table>
  </dd>
</dl>

</div>
</div>
<a class="anchor" id="a231271cb08c7ac7b317b66955ef44582"></a><!-- doxytag: member="libevocosm::evoreal::evoreal" ref="a231271cb08c7ac7b317b66955ef44582" args="(evoreal &amp;a_source)" -->
<div class="memitem">
<div class="memproto">
      <table class="memname">
        <tr>
          <td class="memname">libevocosm::evoreal::evoreal </td>
          <td>(</td>
          <td class="paramtype"><a class="el" href="a00003.html">evoreal</a> &amp;&#160;</td>
          <td class="paramname"><em>a_source</em></td><td>)</td>
          <td></td>
        </tr>
      </table>
</div>
<div class="memdoc">
<p>Creates a new evoreal with the same states as an existing one. </p>
<dl><dt><b>Parameters:</b></dt><dd>
  <table class="params">
    <tr><td class="paramname">a_source</td><td>- The source object </td></tr>
  </table>
  </dd>
</dl>

</div>
</div>
<hr/><h2>Member Function Documentation</h2>
<a class="anchor" id="ae262cab3a9f1620404f51e7c985d6963"></a><!-- doxytag: member="libevocosm::evoreal::crossover" ref="ae262cab3a9f1620404f51e7c985d6963" args="(float a_f1, float a_f2)" -->
<div class="memitem">
<div class="memproto">
      <table class="memname">
        <tr>
          <td class="memname">float libevocosm::evoreal::crossover </td>
          <td>(</td>
          <td class="paramtype">float&#160;</td>
          <td class="paramname"><em>a_f1</em>, </td>
        </tr>
        <tr>
          <td class="paramkey"></td>
          <td></td>
          <td class="paramtype">float&#160;</td>
          <td class="paramname"><em>a_f2</em>&#160;</td>
        </tr>
        <tr>
          <td></td>
          <td>)</td>
          <td></td><td></td>
        </tr>
      </table>
</div>
<div class="memdoc">
<p>Creates a new float by combining two values through a real-specialized form of crossover. </p>
<dl><dt><b>Parameters:</b></dt><dd>
  <table class="params">
    <tr><td class="paramname">a_f1</td><td>- First parent number </td></tr>
    <tr><td class="paramname">a_f2</td><td>- Second parent number </td></tr>
  </table>
  </dd>
</dl>
<dl class="return"><dt><b>Returns:</b></dt><dd>A combination of the two arguments </dd></dl>

</div>
</div>
<a class="anchor" id="a03dcd90a97ad0407a1f56a065aabe04a"></a><!-- doxytag: member="libevocosm::evoreal::crossover" ref="a03dcd90a97ad0407a1f56a065aabe04a" args="(double a_d1, double a_d2)" -->
<div class="memitem">
<div class="memproto">
      <table class="memname">
        <tr>
          <td class="memname">double libevocosm::evoreal::crossover </td>
          <td>(</td>
          <td class="paramtype">double&#160;</td>
          <td class="paramname"><em>a_d1</em>, </td>
        </tr>
        <tr>
          <td class="paramkey"></td>
          <td></td>
          <td class="paramtype">double&#160;</td>
          <td class="paramname"><em>a_d2</em>&#160;</td>
        </tr>
        <tr>
          <td></td>
          <td>)</td>
          <td></td><td></td>
        </tr>
      </table>
</div>
<div class="memdoc">
<p>Creates a new double by combining two values through a real-specialized form of crossover. </p>
<dl><dt><b>Parameters:</b></dt><dd>
  <table class="params">
    <tr><td class="paramname">a_d1</td><td>- First parent number </td></tr>
    <tr><td class="paramname">a_d2</td><td>- Second parent number </td></tr>
  </table>
  </dd>
</dl>
<dl class="return"><dt><b>Returns:</b></dt><dd>A combination of the two arguments </dd></dl>

</div>
</div>
<a class="anchor" id="a4868f130ce3e90d3ccd19b33d3d3631f"></a><!-- doxytag: member="libevocosm::evoreal::mutate" ref="a4868f130ce3e90d3ccd19b33d3d3631f" args="(float a_f)" -->
<div class="memitem">
<div class="memproto">
      <table class="memname">
        <tr>
          <td class="memname">float libevocosm::evoreal::mutate </td>
          <td>(</td>
          <td class="paramtype">float&#160;</td>
          <td class="paramname"><em>a_f</em></td><td>)</td>
          <td></td>
        </tr>
      </table>
</div>
<div class="memdoc">
<p>Returns a new float that is a mutated version of the argument. </p>
<dl><dt><b>Parameters:</b></dt><dd>
  <table class="params">
    <tr><td class="paramname">a_f</td><td>- Number to be cloned; the result is then mutated </td></tr>
  </table>
  </dd>
</dl>
<dl class="return"><dt><b>Returns:</b></dt><dd>A clone of a_f that has bene mutated </dd></dl>

</div>
</div>
<a class="anchor" id="a8b8d17b69a3af3b808e56bc37f8d974e"></a><!-- doxytag: member="libevocosm::evoreal::mutate" ref="a8b8d17b69a3af3b808e56bc37f8d974e" args="(double a_d)" -->
<div class="memitem">
<div class="memproto">
      <table class="memname">
        <tr>
          <td class="memname">double libevocosm::evoreal::mutate </td>
          <td>(</td>
          <td class="paramtype">double&#160;</td>
          <td class="paramname"><em>a_d</em></td><td>)</td>
          <td></td>
        </tr>
      </table>
</div>
<div class="memdoc">
<p>Returns a new float that is a mutated version of the argument. </p>
<dl><dt><b>Parameters:</b></dt><dd>
  <table class="params">
    <tr><td class="paramname">a_d</td><td>- Number to be cloned; the result is then mutated </td></tr>
  </table>
  </dd>
</dl>
<dl class="return"><dt><b>Returns:</b></dt><dd>A clone of a_d that has bene mutated </dd></dl>

</div>
</div>
<a class="anchor" id="acb43516f7a6560f08f4553d97a210d41"></a><!-- doxytag: member="libevocosm::evoreal::operator=" ref="acb43516f7a6560f08f4553d97a210d41" args="(evoreal &amp;a_source)" -->
<div class="memitem">
<div class="memproto">
      <table class="memname">
        <tr>
          <td class="memname"><a class="el" href="a00003.html">evoreal</a>&amp; libevocosm::evoreal::operator= </td>
          <td>(</td>
          <td class="paramtype"><a class="el" href="a00003.html">evoreal</a> &amp;&#160;</td>
          <td class="paramname"><em>a_source</em></td><td>)</td>
          <td></td>
        </tr>
      </table>
</div>
<div class="memdoc">
<p>Assigns the state of one evoreal to another. </p>
<dl><dt><b>Parameters:</b></dt><dd>
  <table class="params">
    <tr><td class="paramname">a_source</td><td>- The source object </td></tr>
  </table>
  </dd>
</dl>

</div>
</div>
<hr/>The documentation for this class was generated from the following file:<ul>
<li><a class="el" href="a00037_source.html">evoreal.h</a></li>
</ul>
</div>
<hr>
<p align="center"><small>
&copy; 1996-2005 Scott Robert Ladd. All rights reserved.<br>
HTML documentation generated by Dimitri van Heesch's excellent <a href="http://www.doxygen.org">Doxygen</a> tool.
</small>
</p>
</body>
</html>