This file is indexed.

/usr/include/InsightToolkit/Common/itkMultiThreader.h is in libinsighttoolkit3-dev 3.20.1-1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
/*=========================================================================

  Program:   Insight Segmentation & Registration Toolkit
  Module:    itkMultiThreader.h
  Language:  C++
  Date:      $Date$
  Version:   $Revision$

  Copyright (c) Insight Software Consortium. All rights reserved.
  See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.

  Portions of this code are covered under the VTK copyright.
  See VTKCopyright.txt or http://www.kitware.com/VTKCopyright.htm for details.

     This software is distributed WITHOUT ANY WARRANTY; without even 
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
     PURPOSE.  See the above copyright notices for more information.

=========================================================================*/
#ifndef __itkMultiThreader_h
#define __itkMultiThreader_h

#include "itkObject.h"
#include "itkMutexLock.h"

#ifdef ITK_USE_SPROC
#include <sys/types.h>
#include <sys/resource.h>
#include <sys/types.h>
#include <sys/prctl.h>
#include <wait.h>
#include <errno.h>
#include <ulocks.h>
#include <fcntl.h>
#include <unistd.h>
#include <stdlib.h>
#include <signal.h>
#include <sys/signal.h>
#include <sys/sysmp.h>
#include <sys/errno.h>
#include <sys/syssgi.h>

extern "C" {
#include <sys/pmo.h>
#include <fetchop.h>
}
#endif

#ifdef ITK_USE_PTHREADS
#include <pthread.h>
#endif

namespace itk
{
/** \class MultiThreader
 * \brief A class for performing multithreaded execution
 *
 * Multithreader is a class that provides support for multithreaded
 * execution using sproc() on an SGI, or pthread_create on any platform
 * supporting POSIX threads.  This class can be used to execute a single
 * method on multiple threads, or to specify a method per thread.
 *
 * \ingroup OSSystemObejcts
 *
 * \par Note
 * If ITK_USE_SPROC is defined, then sproc() will be used to create
 * multiple threads on an SGI. If ITK_USE_PTHREADS is defined, then
 * pthread_create() will be used to create multiple threads (on
 * a sun, for example).
 */

// The maximum number of threads allowed
#ifdef ITK_USE_SPROC
#define ITK_MAX_THREADS              128
#endif

#ifdef ITK_USE_PTHREADS
#define ITK_MAX_THREADS              128
#endif

#ifdef ITK_USE_WIN32_THREADS
#define ITK_MAX_THREADS              128
#endif

// cygwin threads are unreliable
#ifdef __CYGWIN__
#undef ITK_MAX_THREADS
#define ITK_MAX_THREADS 128 
#endif

// at one point, mingw threads caused crashes so limit was set to 1
// as of July 2009, all tests are passing with threads enabled
#if defined(__MINGW32__)
#undef ITK_MAX_THREADS
#define ITK_MAX_THREADS 128
#endif
  
// On some sgi machines, threads and stl don't mix so limit to 1
#if defined(__sgi) && defined(_COMPILER_VERSION) && _COMPILER_VERSION <= 730
#undef ITK_MAX_THREADS
#define ITK_MAX_THREADS 1 
#endif
  
#ifndef ITK_MAX_THREADS
#define ITK_MAX_THREADS 1
#endif

/** \par Note
 * If ITK_USE_PTHREADS is defined, then the multithreaded
 * function is of type void *, and returns NULL
 * Otherwise the type is void which is correct for WIN32
 * and SPROC. */
#ifdef ITK_USE_SPROC
typedef int ThreadProcessIDType;
#endif

#ifdef ITK_USE_PTHREADS
typedef void *(*ThreadFunctionType)(void *);
typedef pthread_t ThreadProcessIDType;
#define ITK_THREAD_RETURN_VALUE  NULL
#define ITK_THREAD_RETURN_TYPE   void *
#endif

#ifdef ITK_USE_WIN32_THREADS
typedef LPTHREAD_START_ROUTINE ThreadFunctionType;
typedef HANDLE                 ThreadProcessIDType;
#define ITK_THREAD_RETURN_VALUE 0
#define ITK_THREAD_RETURN_TYPE DWORD __stdcall
#endif

#ifndef ITK_THREAD_RETURN_VALUE
typedef void (*ThreadFunctionType)(void *);
typedef int ThreadProcessIDType;
#define ITK_THREAD_RETURN_VALUE
#define ITK_THREAD_RETURN_TYPE void
#endif
  
class ITKCommon_EXPORT MultiThreader : public Object 
{
public:
  /** Standard class typedefs. */
  typedef MultiThreader             Self;
  typedef Object                    Superclass;
  typedef SmartPointer<Self>        Pointer;
  typedef SmartPointer<const Self>  ConstPointer;
  
  /** Method for creation through the object factory. */
  itkNewMacro(Self);  

  /** Run-time type information (and related methods). */
  itkTypeMacro(MultiThreader, Object);

  /** Get/Set the number of threads to create. It will be clamped to the range
   * [ 1, m_GlobalMaximumNumberOfThreads ], so the caller of this method should
   * check that the requested number of threads was accepted. */
  void SetNumberOfThreads( int numberOfThreads );
  itkGetConstMacro( NumberOfThreads, int );
    
  /** Set/Get the maximum number of threads to use when multithreading.  It
   * will be clamped to the range [ 1, ITK_MAX_THREADS ] because several arrays
   * are already statically allocated using the ITK_MAX_THREADS number.
   * Therefore the caller of this method should check that the requested number
   * of threads was accepted. */
  static void SetGlobalMaximumNumberOfThreads(int val);
  static int  GetGlobalMaximumNumberOfThreads();
  
  /** Set/Get the value which is used to initialize the NumberOfThreads in the
   * constructor.  It will be clamped to the range [1, m_GlobalMaximumNumberOfThreads ].
   * Therefore the caller of this method should check that the requested number
   * of threads was accepted. */
  static void SetGlobalDefaultNumberOfThreads(int val);
  static int  GetGlobalDefaultNumberOfThreads();
  
  /** Execute the SingleMethod (as define by SetSingleMethod) using
   * m_NumberOfThreads threads. As a side effect the m_NumberOfThreads will be
   * checked against the current m_GlobalMaximumNumberOfThreads and clamped if
   * necessary. */
  void SingleMethodExecute();

  /** Execute the MultipleMethods (as define by calling SetMultipleMethod for
   * each of the required m_NumberOfThreads methods) using m_NumberOfThreads
   * threads. As a side effect the m_NumberOfThreads will be checked against the
   * current m_GlobalMaximumNumberOfThreads and clamped if necessary. */
  void MultipleMethodExecute();
  
  /** Set the SingleMethod to f() and the UserData field of the
   * ThreadInfoStruct that is passed to it will be data.
   * This method (and all the methods passed to SetMultipleMethod)
   * must be of type itkThreadFunctionType and must take a single argument of
   * type void *. */
  void SetSingleMethod(ThreadFunctionType, void *data );
  
  /** Set the MultipleMethod at the given index to f() and the UserData 
   * field of the ThreadInfoStruct that is passed to it will be data. */
  void SetMultipleMethod( int index, ThreadFunctionType, void *data ); 

  /** Create a new thread for the given function. Return a thread id
     * which is a number between 0 and ITK_MAX_THREADS - 1. This
   * id should be used to kill the thread at a later time. */
  // FIXME: Doesn't seem to be called anywhere...
  int SpawnThread( ThreadFunctionType, void *data );

  /** Terminate the thread that was created with a SpawnThreadExecute() */
  void TerminateThread( int thread_id );
  
#ifdef ITK_USE_SPROC
  static bool GetInitialized()
    { return m_Initialized; }
  static usptr_t * GetThreadArena()
    { return m_ThreadArena; }

  static void Initialize();
#endif
  
  /** This is the structure that is passed to the thread that is
   * created from the SingleMethodExecute, MultipleMethodExecute or
   * the SpawnThread method. It is passed in as a void *, and it is up
   * to the method to cast correctly and extract the information.  The
   * ThreadID is a number between 0 and NumberOfThreads-1 that
   * indicates the id of this thread. The NumberOfThreads is
   * this->NumberOfThreads for threads created from
   * SingleMethodExecute or MultipleMethodExecute, and it is 1 for
   * threads created from SpawnThread.  The UserData is the (void
   * *)arg passed into the SetSingleMethod, SetMultipleMethod, or
   * SpawnThread method. */
#ifdef ThreadInfoStruct
#undef ThreadInfoStruct
#endif
  struct ThreadInfoStruct
    {
#ifdef ITK_USE_SPROC
    char Pad1[128];
#endif
    int                 ThreadID;
    int                 NumberOfThreads;
    int                 *ActiveFlag;
    MutexLock::Pointer  ActiveFlagLock;
    void                *UserData;
    ThreadFunctionType  ThreadFunction;
    enum {SUCCESS, ITK_EXCEPTION, ITK_PROCESS_ABORTED_EXCEPTION, STD_EXCEPTION, UNKNOWN} ThreadExitCode;
#ifdef ITK_USE_SPROC
    char Pad2[128];
#endif
    };
  
protected:
  MultiThreader();
  ~MultiThreader();
  void PrintSelf(std::ostream& os, Indent indent) const;

private:
  
#ifdef ITK_USE_SPROC
  static bool m_Initialized;
  static usptr_t * m_ThreadArena;
  static int m_DevzeroFd;
#endif

  MultiThreader(const Self&); //purposely not implemented
  void operator=(const Self&); //purposely not implemented

  /** An array of thread info containing a thread id
   *  (0, 1, 2, .. ITK_MAX_THREADS-1), the thread count, and a pointer
   *  to void so that user data can be passed to each thread. */
  ThreadInfoStruct           m_ThreadInfoArray[ITK_MAX_THREADS];

  /** The methods to invoke. */
  ThreadFunctionType         m_SingleMethod;
  ThreadFunctionType         m_MultipleMethod[ITK_MAX_THREADS];
  
  /** Storage of MutexFunctions and ints used to control spawned 
   *  threads and the spawned thread ids. */
  int                        m_SpawnedThreadActiveFlag    [ITK_MAX_THREADS];
  MutexLock::Pointer         m_SpawnedThreadActiveFlagLock[ITK_MAX_THREADS];
  ThreadProcessIDType        m_SpawnedThreadProcessID     [ITK_MAX_THREADS];
  ThreadInfoStruct           m_SpawnedThreadInfoArray     [ITK_MAX_THREADS];
  
  /** Internal storage of the data. */
  void                       *m_SingleData;
  void                       *m_MultipleData[ITK_MAX_THREADS];

  /** Global variable defining the maximum number of threads that can be used.
   *  The m_GlobalMaximumNumberOfThreads must always be less than or equal to
   *  ITK_MAX_THREADS and greater than zero. */
  static int                  m_GlobalMaximumNumberOfThreads;

  /*  Global variable defining the default number of threads to set at
   *  construction time of a MultiThreader instance.  The
   *  m_GlobalDefaultNumberOfThreads must always be less than or equal to the
   *  m_GlobalMaximumNumberOfThreads and larger or equal to 1 once it has been
   *  initialized in the constructor of the first MultiThreader instantiation.
   */
  static int                  m_GlobalDefaultNumberOfThreads;

  /** The number of threads to use. 
   *  The m_NumberOfThreads must always be less than or equal to
   *  the m_GlobalMaximumNumberOfThreads before it is used during the execution
   *  of a threaded method. Its value is clamped in the SingleMethodExecute()
   *  and MultipleMethodExecute(). Its value is initialized to
   *  m_GlobalDefaultNumberOfThreads at construction time. Its value is clamped
   *  to the current m_GlobalMaximumNumberOfThreads in the
   *  SingleMethodExecute() and MultipleMethodExecute() methods. 
   */
  int                        m_NumberOfThreads;

  
  /** Static function used as a "proxy callback" by the MultiThreader.  The
   * threading library will call this routine for each thread, which
   * will delegate the control to the prescribed SingleMethod. This
   * routine acts as an intermediary between the MultiThreader and the
   * user supplied callback (SingleMethod) in order to catch any
   * exceptions thrown by the threads. */
  static ITK_THREAD_RETURN_TYPE SingleMethodProxy( void *arg );

  /** Spawn a thread for the prescribed SingleMethod.  This routine
   * spawns a thread to the SingleMethodProxy which runs the
   * prescribed SingleMethod.  The SingleMethodProxy allows for
   * exceptions within a thread to be naively handled. A similar
   * abstraction needs to be added for MultipleMethod and
   * SpawnThread. */
  ThreadProcessIDType DispatchSingleMethodThread(ThreadInfoStruct *);

  /** Wait for a thread running the prescribed SingleMethod. A similar
   * abstraction needs to be added for MultipleMethod (SpawnThread
   * already has a routine to do this. */
  void WaitForSingleMethodThread(ThreadProcessIDType);

  
  /** Friends of Multithreader.
   * ProcessObject is a friend so that it can call PrintSelf() on its
   * Multithreader. */
  friend class ProcessObject;
}; 
 
}  // end namespace itk
#endif